Prupe.6G332400_v2.0.a1

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0007241
Physical Location & Seq
Forward (+)
28941419 .. 28948549
7131 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G332400.1

Sequence Viewer

Length: 2535 bp
ATGAAGAAGAACCAGAACAACAATAATAGCAAGCTTGTTCAGACTAATCATCACCATCATAGCAATACTAATGGCTTCCTTCCTAATTCTCTGAAATTCATTTCGTCTTGCATTAAAACCGCCTCTTCCGGAGTCCGGTCAGCCGGCGCCTCCGTCGCCGCCTCCATTTCCACTGACCCTCACGATTGCCGCGACCAGGTGCTGTGGGCTTGCTTTGACAGAGTAGAGCTTGGTCCATCTTCCTTCAAACATGTTCTACTACTCGGTTATTCCAATGGCTTTCAAGTCCTGGATGTTGAAGATGCCTCTAATGTCAATGAACTTGCATCAAGGCGTGATGATCCAGTTACATTCTTACAGATGCAACCCCTGCCTGCAAAGTGTGAGGGTCAGGAAGGATTCAGATCTTCACATCCTTTACTCATGGTTGTTGCTTGTGATGAATCAAAGAGCTCAGGTATGACGCAAACAGGGAGAGAGGGGTTGGTCAATGGTCATACTGAGCCTCAAACAGGAAACTCTCCTTTGTCTCCTACAGCTGTTCGGTTTTATTCGCTAAAGTCTTGCAATTATGTTCATGTTCTGAGATTCCGTTCAACTGTGTATATGGTTAGATGCAGTCCTCAAATAGTAGCTGTGGGTCTTGCGTCACAAATATACTGCTTTGATGCTGTCACTCTTGAGAACAAATTCAGTGTCCTTACTTATCCTGTCCCCCAGTTGGGAGTTCAAGGACTGGTTGGGGTCAATATTGGATATGGTCCCATGGCTGTTGGTCCCAGGTGGTTGGCTTATGCTTCCAACAACCCTCTGCTGTCAAACACAGGCCGCCTCAGTCCGCAAAGTCTTACTCCTCCAGGTGTTAGTCCATCAACTTCACCAAGCAGTGGGAGTCTGATGGCTCGATATGCAATGGAATCTAGTAAACAGTTAGCAACCGGTTTACTGAATCTGGGAGACATGGGTTACAAAACCTTGTCCAAGTACTATCAAGAGTTTATACCCGATGGTTCCAGCTCTCCTGTGTCATCAAATTCTAGCTGGAAAGTTGGGAGGGTTGCATCACATTCAACAGAAACAGATATTGCTGGAATGGTTGTTTTAAAAGACTTTCTTTCCAGAGCTGTTGTATCACAATTTAGGGCACATACTAGTCCCATTTCTGCTCTATGTTTTGACCCAAGTGGGACTCTTCTTGTTACCGCCTCAATACATGGAAACAATATCAACATTTTTCGAATAATGCCATCCTGCTCGCATAATGGATCAGGCACTCAAAGCTATGACTGGACTTCTTCTCATGTGCACCTTTACAAGCTACATCGTGGCATGACATCTGCTGTTATCCAAGACATCTGTTTTAGTCAATATAGTCAATGGATTGCAATTGTTTCATCCAGGGGGACTTGCCATATTTTTGCTTTGTCCCCCTTTGGTGGTGACGCAATTCTTCAAATTCAGAACTCTCATGTTAATGGGCCTACTCTTTCACCAGTTCCATCTGCACCATGGTGGTCTACTCCTTATTTCATGACAAATCAGCAACCTTTTTCTCCACCACCGGCAGTTACCCTTTCTGTGGTTAGCAGAATAAAGAATAATAACTCCGGGTGGCTCAACACAGTTAGTAATGCTGCATCTTCTGCAGCAGGAAAGGCTTCCATTCCGTCTGGGGCTGTTGCCACTGTATTCCATAGTTCTTTACCTCATGATCTGCAATCTTCTCACGCGAAGGTCACTGCTTTGGAGCACCTATTGGTTTACACTCCTTCTGGTTATGCAATTCAATATAAACTACTTCCATCAGTGGGGGGAGAGCCAGGTGAAGCTGCTTCAAGAACAGGGCCAGGTTCTTCAGTGCAGATACAGGATGAAGATTTGCGAGTGAGAGTTGAGCCTCTTCAATGGTGGGATGTTTGCCGAAGAAATGATTGGCCTGAAAGAGAGGAATGCATTTCCGGGATTATGCTTGGGAAACAAGAATATGTGGAGACAGTCATGGATAGTTCTGAATGTGATGACAATGATATTGGGGATAAGGAGTTGGTAAAACCCCTTGAGCGATCTCACTTGTATCTCTCCAATGCTGAGGTTCAGATCAATTCTGGAAGGATTCCAATCTGGCAAAAGTCTAAGATATATTTCTATACAATGAATCCGTTGGGGGCTAGTGAGCTAAATTTCACTAAGGATCTTACTGGAGGAGAGATGGAAATAGAGAAGGTTCCTGTTCACGAGGTGGAAATTAGGCGGAAGGATTTGCTACCTGTTGTTCATCCTTTTCATAGATTTCAGTCTGAATGGAGTGGCAGGCGTGCAGTTGGAGGATACTCAAGTTCATCTTCTGATTCTCATGAAGCTAAAGAAAACTTTCAGGAAAAGGGTGGTATTTCTGATGACAAGGTGGCACCTACTGGCTCAGCTGAAAACCCAGATGTTGGTGATTCTTATCCATCCATTCACCAACCTGGGAGTGGAGGCACAGTTATTAACGAGGGAGATCTTTTTTGGTGTCACCTGACTCACCTCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0000785 GO:0001952 GO:0001953 GO:0003674 GO:0003682 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005737 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006357 GO:0006810 GO:0006950 GO:0006996 GO:0007010 GO:0007017 GO:0007030 GO:0007162 GO:0007275 GO:0008047 GO:0008092 GO:0008134 GO:0008150 GO:0009605 GO:0009653 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010256 GO:0010468 GO:0010556 GO:0010557 GO:0010594 GO:0010595 GO:0010604 GO:0010628 GO:0010632 GO:0010634 GO:0010638 GO:0010698 GO:0010810 GO:0010812 GO:0015630 GO:0015631 GO:0016043 GO:0016192 GO:0019219 GO:0019222 GO:0019899 GO:0030155 GO:0030234 GO:0030334 GO:0030335 GO:0031023 GO:0031252 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031344 GO:0031346 GO:0031667 GO:0031974 GO:0031981 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0032956 GO:0032970 GO:0033043 GO:0033157 GO:0034260 GO:0035035 GO:0035148 GO:0035239 GO:0035257 GO:0035295 GO:0035327 GO:0040012 GO:0040017 GO:0042221 GO:0042393 GO:0042594 GO:0043085 GO:0043086 GO:0043087 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043547 GO:0043627 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045111 GO:0045893 GO:0045935 GO:0045944 GO:0048487 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051346 GO:0051427 GO:0051489 GO:0051491 GO:0051493 GO:0051495 GO:0051716 GO:0051893 GO:0051895 GO:0060255 GO:0060341 GO:0060491 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070887 GO:0071391 GO:0071840 GO:0080090 GO:0090087 GO:0090109 GO:0090316 GO:0090630 GO:0098772 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0120032 GO:0120034 GO:0120035 GO:1901888 GO:1901889 GO:1902680 GO:1903391 GO:1903392 GO:1903506 GO:1903508 GO:1903827 GO:1903829 GO:1904951 GO:2000112 GO:2000114 GO:2000145 GO:2000147 GO:2000249 GO:2000251 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BCAS3 WD40

Protein Analysis

845

Amino Acids

91.85

Weight (kDa)

6.37

Isoelectric Point (pI)

50.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 146, 2407
AccB7I CCANNNNNTGG 2 cut(s) 887, 2438
AccI GTMKAC 1 cut(s) 1517
AccII CGCG 2 cut(s) 192, 1730
AccIII TCCGGA 1 cut(s) 128
AciI CCGC 7 cut(s) 120, 159, 190, 829, 839, 1203, 2251
AclWI GGATC 3 cut(s) 335, 1273, 2199
AcsI RAATTY 5 cut(s) 95, 689, 1033, 1455, 2179
AcuI CTGAAG 1 cut(s) 1839
AcyI GRCGYC 1 cut(s) 147
AdeI CACNNNGTG 1 cut(s) 2239
AfaI GTAC 1 cut(s) 986
AflIII ACRYGT 1 cut(s) 250
AgeI ACCGGT 1 cut(s) 938
AhlI ACTAGT 1 cut(s) 1151
AjnI CCWGG 8 cut(s) 195, 288, 779, 856, 1397, 1819, 1846, 2467
AjuI GAANNNNNNNTTGG 2 cut(s) 1915, 1947
AleI CACNNNNGTG 1 cut(s) 1510
Alw21I GWGCWC 3 cut(s) 455, 1308, 1752
Alw26I GTCTC 3 cut(s) 534, 951, 1985
Alw44I GTGCAC 1 cut(s) 1304
AlwI GGATC 3 cut(s) 335, 1273, 2199
AlwNI CAGNNNCTG 1 cut(s) 202
Aor13HI TCCGGA 1 cut(s) 128
AoxI GGCC 4 cut(s) 826, 1478, 1844, 1934
ApaLI GTGCAC 1 cut(s) 1304
ApeKI GCWGC 3 cut(s) 1634, 1646, 1829
ApoI RAATTY 5 cut(s) 95, 689, 1033, 1455, 2179
ArsI GACNNNNNNTTYG 2 cut(s) 681, 713
AsiGI ACCGGT 1 cut(s) 938
Asp700I GAANNNNTTC 3 cut(s) 689, 1657, 2370
AspLEI GCGC 1 cut(s) 149
AspS9I GGNCC 5 cut(s) 233, 761, 776, 1478, 1844
AsuC2I CCSGG 2 cut(s) 1609, 1960
AsuHPI GGTGA 9 cut(s) 44, 870, 1451, 1482, 1835, 2453, 2453, 2507, 2516
AsuII TTCGAA 1 cut(s) 1237
AvaII GGWCC 3 cut(s) 233, 761, 776
BaeGI GKGCMC 2 cut(s) 1147, 1308
BaeI ACNNNNGTAYC 2 cut(s) 2320, 2353
BanI GGYRCC 2 cut(s) 146, 2407
BanII GRGCYC 1 cut(s) 455
BauI CACGAG 1 cut(s) 2234
Bbv12I GWGCWC 3 cut(s) 455, 1308, 1752
BbvCI CCTCAGC 1 cut(s) 2088
BbvI GCAGC 3 cut(s) 1621, 1658, 1816
BciT130I CCWGG 8 cut(s) 197, 290, 781, 858, 1399, 1821, 1848, 2469
BciVI GTATCC 1 cut(s) 2321
BcnI CCSGG 2 cut(s) 1609, 1960
BcoDI GTCTC 3 cut(s) 534, 951, 1985
BcuI ACTAGT 1 cut(s) 1151
BfaI CTAG 4 cut(s) 921, 1038, 1152, 2169
BfmI CTRYAG 2 cut(s) 534, 1644
BfoI RGCGCY 1 cut(s) 150
BfuI GTATCC 1 cut(s) 2321
BglII AGATCT 2 cut(s) 404, 2500
BisI GCNGC 6 cut(s) 159, 190, 829, 1635, 1647, 1830
BlpI GCTNAGC 1 cut(s) 2419
BlsI GCNGC 6 cut(s) 160, 191, 830, 1636, 1648, 1831
BmcAI AGTACT 1 cut(s) 986
Bme18I GGWCC 3 cut(s) 233, 761, 776
BmgT120I GGNCC 5 cut(s) 233, 761, 776, 1478, 1844
BmiI GGNNCC 6 cut(s) 148, 763, 778, 1012, 2226, 2409
BmrI ACTGGG 1 cut(s) 712
BmsI GCATC 7 cut(s) 292, 335, 351, 605, 658, 1070, 1646
BmuI ACTGGG 1 cut(s) 712
BpmI CTGGAG 2 cut(s) 840, 2220
Bpu10I CCTNAGC 2 cut(s) 454, 2088
Bpu1102I GCTNAGC 1 cut(s) 2419
Bpu14I TTCGAA 1 cut(s) 1237
BpuEI CTTGAG 3 cut(s) 701, 2078, 2317
BpuMI CCSGG 2 cut(s) 1609, 1960
BsaBI GATNNNNATC 3 cut(s) 403, 2117, 2448
BsaHI GRCGYC 1 cut(s) 147
BsaJI CCNNGG 5 cut(s) 765, 779, 1398, 1508, 2468
BsaWI WCCGGW 3 cut(s) 128, 135, 938
BsaXI ACNNNNNCTCC 2 cut(s) 2469, 2499
Bse118I RCCGGY 3 cut(s) 143, 938, 1561
Bse1I ACTGG 7 cut(s) 344, 718, 741, 1292, 1493, 2203, 2419
Bse3DI GCAATG 1 cut(s) 918
Bse8I GATNNNNATC 3 cut(s) 403, 2117, 2448
BseAI TCCGGA 1 cut(s) 128
BseBI CCWGG 8 cut(s) 197, 290, 781, 858, 1399, 1821, 1848, 2469
BseDI CCNNGG 5 cut(s) 765, 779, 1398, 1508, 2468
BseGI GGATG 8 cut(s) 298, 412, 1247, 1394, 1876, 1918, 2275, 2453
BseJI GATNNNNATC 3 cut(s) 403, 2117, 2448
BseMI GCAATG 1 cut(s) 918
BseMII CTCAG 6 cut(s) 468, 492, 575, 847, 2079, 2433
BseNI ACTGG 7 cut(s) 344, 718, 741, 1292, 1493, 2203, 2419
BseRI GAGGAG 2 cut(s) 843, 2217
BseSI GKGCMC 2 cut(s) 1147, 1308
BseXI GCAGC 3 cut(s) 1621, 1658, 1816
BsgI GTGCAG 3 cut(s) 1488, 1880, 2337
Bsh1236I CGCG 2 cut(s) 192, 1730
BshFI GGCC 4 cut(s) 828, 1480, 1846, 1936
BshNI GGYRCC 2 cut(s) 146, 2407
BshTI ACCGGT 1 cut(s) 938
BsiHKAI GWGCWC 3 cut(s) 455, 1308, 1752
BsiSI CCGG 7 cut(s) 129, 136, 144, 939, 1562, 1608, 1959
BslFI GGGAC 7 cut(s) 698, 747, 762, 1140, 1201, 1411, 1417
BsmAI GTCTC 3 cut(s) 534, 951, 1985
BsmFI GGGAC 7 cut(s) 698, 747, 762, 1140, 1201, 1411, 1417
BsmI GAATGC 1 cut(s) 1955
BsnI GGCC 4 cut(s) 828, 1480, 1846, 1936
Bsp119I TTCGAA 1 cut(s) 1237
Bsp1286I GDGCHC 4 cut(s) 455, 1147, 1308, 1752
Bsp13I TCCGGA 1 cut(s) 128
Bsp143I GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
Bsp1720I GCTNAGC 1 cut(s) 2419
Bsp19I CCATGG 2 cut(s) 765, 1508
BspACI CCGC 7 cut(s) 120, 159, 190, 829, 839, 1203, 2251
BspANI GGCC 4 cut(s) 828, 1480, 1846, 1936
BspCNI CTCAG 6 cut(s) 467, 493, 576, 846, 2080, 2432
BspEI TCCGGA 1 cut(s) 128
BspFNI CGCG 2 cut(s) 192, 1730
BspHI TCATGA 3 cut(s) 1530, 1708, 2353
BspLI GGNNCC 6 cut(s) 148, 763, 778, 1012, 2226, 2409
BspMAI CTGCAG 1 cut(s) 1648
BspPI GGATC 3 cut(s) 335, 1273, 2199
BspT104I TTCGAA 1 cut(s) 1237
BspT107I GGYRCC 2 cut(s) 146, 2407
BsrDI GCAATG 1 cut(s) 918
BsrFI RCCGGY 3 cut(s) 143, 938, 1561
BsrI ACTGG 7 cut(s) 344, 718, 741, 1292, 1493, 2203, 2419
BssAI RCCGGY 3 cut(s) 143, 938, 1561
BssECI CCNNGG 5 cut(s) 765, 779, 1398, 1508, 2468
BssMI GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
BssNI GRCGYC 1 cut(s) 147
BssSI CACGAG 1 cut(s) 2234
BssT1I CCWWGG 2 cut(s) 765, 1508
Bst2BI CACGAG 1 cut(s) 2234
Bst2UI CCWGG 8 cut(s) 197, 290, 781, 858, 1399, 1821, 1848, 2469
Bst4CI ACNGT 6 cut(s) 601, 930, 1624, 1687, 1996, 2485
Bst6I CTCTTC 3 cut(s) 130, 1197, 1905
BstACI GRCGYC 1 cut(s) 147
BstAPI GCANNNNNTGC 2 cut(s) 370, 1643
BstBI TTCGAA 1 cut(s) 1237
BstC8I GCNNGC 7 cut(s) 32, 145, 211, 375, 1256, 2312, 2316
BstDEI CTNAG 8 cut(s) 454, 501, 584, 833, 2088, 2133, 2187, 2419
BstDSI CCRYGG 2 cut(s) 765, 1508
BstENI CCTNNNNNAGG 1 cut(s) 510
BstF5I GGATG 8 cut(s) 298, 412, 1247, 1394, 1876, 1918, 2275, 2453
BstFNI CGCG 2 cut(s) 192, 1730
BstH2I RGCGCY 1 cut(s) 150
BstHHI GCGC 1 cut(s) 149
BstKTI GATC 8 cut(s) 343, 407, 1268, 1714, 2066, 2100, 2194, 2503
BstMAI GTCTC 3 cut(s) 534, 951, 1985
BstMBI GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
BstMWI GCNNNNNNNGC 6 cut(s) 155, 370, 908, 1278, 1643, 1655
BstNI CCWGG 8 cut(s) 197, 290, 781, 858, 1399, 1821, 1848, 2469
BstNSI RCATGY 1 cut(s) 254
BstSFI CTRYAG 2 cut(s) 534, 1644
BstSLI GKGCMC 2 cut(s) 1147, 1308
BstUI CGCG 2 cut(s) 192, 1730
BstV1I GCAGC 3 cut(s) 1621, 1658, 1816
BstX2I RGATCY 3 cut(s) 404, 2191, 2500
BstXI CCANNNNNNTGG 1 cut(s) 787
BstYI RGATCY 3 cut(s) 404, 2191, 2500
BsuI GTATCC 1 cut(s) 2321
BsuRI GGCC 4 cut(s) 828, 1480, 1846, 1936
BtgI CCRYGG 2 cut(s) 765, 1508
BtsCI GGATG 8 cut(s) 298, 412, 1247, 1394, 1876, 1918, 2275, 2453
BtsI GCAGTG 2 cut(s) 892, 1737
BtsIMutI CAGTG 7 cut(s) 171, 700, 892, 1683, 1737, 1812, 1863
Cac8I GCNNGC 7 cut(s) 32, 145, 211, 375, 1256, 2312, 2316
CaiI CAGNNNCTG 1 cut(s) 202
CciI TCATGA 3 cut(s) 1530, 1708, 2353
CfoI GCGC 1 cut(s) 149
Cfr10I RCCGGY 3 cut(s) 143, 938, 1561
Cfr13I GGNCC 5 cut(s) 233, 761, 776, 1478, 1844
CseI GACGC 3 cut(s) 472, 636, 1451
CsiI ACCWGGT 1 cut(s) 195
Csp6I GTAC 1 cut(s) 985
CspAI ACCGGT 1 cut(s) 938
CviQI GTAC 1 cut(s) 985
DdeI CTNAG 8 cut(s) 454, 501, 584, 833, 2088, 2133, 2187, 2419
DinI GGCGCC 1 cut(s) 148
DpnI GATC 8 cut(s) 342, 406, 1267, 1713, 2065, 2099, 2193, 2502
DpnII GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
DraI TTTAAA 1 cut(s) 1104
DraIII CACNNNGTG 1 cut(s) 2239
Eam1104I CTCTTC 3 cut(s) 130, 1197, 1905
EarI CTCTTC 3 cut(s) 130, 1197, 1905
EciI GGCGGA 1 cut(s) 2266
Ecl136II GAGCTC 1 cut(s) 453
Eco130I CCWWGG 2 cut(s) 765, 1508
Eco24I GRGCYC 1 cut(s) 455
Eco47I GGWCC 3 cut(s) 233, 761, 776
Eco53kI GAGCTC 1 cut(s) 453
Eco57I CTGAAG 1 cut(s) 1839
EcoICRI GAGCTC 1 cut(s) 453
EcoNI CCTNNNNNAGG 1 cut(s) 510
EcoRII CCWGG 8 cut(s) 195, 288, 779, 856, 1397, 1819, 1846, 2467
EcoT14I CCWWGG 2 cut(s) 765, 1508
EcoT22I ATGCAT 1 cut(s) 1955
EcoT38I GRGCYC 1 cut(s) 455
EgeI GGCGCC 1 cut(s) 148
EheI GGCGCC 1 cut(s) 148
ErhI CCWWGG 2 cut(s) 765, 1508
FalI AAGNNNNNCTT 4 cut(s) 1098, 1130, 2326, 2358
FaqI GGGAC 7 cut(s) 698, 747, 762, 1140, 1201, 1411, 1417
FblI GTMKAC 1 cut(s) 1517
Fnu4HI GCNGC 6 cut(s) 159, 190, 829, 1635, 1647, 1830
FokI GGATG 8 cut(s) 305, 399, 1234, 1381, 1883, 1925, 2262, 2440
FriOI GRGCYC 1 cut(s) 455
Fsp4HI GCNGC 6 cut(s) 159, 190, 829, 1635, 1647, 1830
FspBI CTAG 4 cut(s) 921, 1038, 1152, 2169
GlaI GCGC 1 cut(s) 148
GluI GCNGC 6 cut(s) 159, 190, 829, 1635, 1647, 1830
GsuI CTGGAG 2 cut(s) 840, 2220
HaeII RGCGCY 1 cut(s) 150
HaeIII GGCC 4 cut(s) 828, 1480, 1846, 1936
HapII CCGG 7 cut(s) 129, 136, 144, 939, 1562, 1608, 1959
HgaI GACGC 3 cut(s) 472, 636, 1451
HhaI GCGC 1 cut(s) 149
Hin1I GRCGYC 1 cut(s) 147
Hin6I GCGC 1 cut(s) 147
HinP1I GCGC 1 cut(s) 147
HindIII AAGCTT 1 cut(s) 32
HpaII CCGG 7 cut(s) 129, 136, 144, 939, 1562, 1608, 1959
HphI GGTGA 9 cut(s) 44, 870, 1451, 1482, 1835, 2453, 2453, 2507, 2516
Hpy166II GTNNAC 6 cut(s) 926, 944, 1306, 1518, 1762, 2233
Hpy8I GTNNAC 6 cut(s) 926, 944, 1306, 1518, 1762, 2233
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 8 cut(s) 89, 253, 389, 1726, 1779, 2103, 2215, 2248
HpyCH4III ACNGT 6 cut(s) 601, 930, 1624, 1687, 1996, 2485
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 370, 908, 1278, 1643, 1655
HpyF3I CTNAG 8 cut(s) 454, 501, 584, 833, 2088, 2133, 2187, 2419
Hsp92I GRCGYC 1 cut(s) 147
HspAI GCGC 1 cut(s) 147
KasI GGCGCC 1 cut(s) 146
Kpn2I TCCGGA 1 cut(s) 128
KroI GCCGGC 1 cut(s) 143
KroNI GCCGGC 1 cut(s) 145
Kzo9I GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
LmnI GCTCC 1 cut(s) 1747
Lsp1109I GCAGC 3 cut(s) 1621, 1658, 1816
LweI GCATC 7 cut(s) 292, 335, 351, 605, 658, 1070, 1646
MabI ACCWGGT 1 cut(s) 195
MaeI CTAG 4 cut(s) 921, 1038, 1152, 2169
MaeIII GTNAC 9 cut(s) 346, 648, 673, 965, 1198, 1439, 1567, 1735, 2513
MalI GATC 8 cut(s) 342, 406, 1267, 1713, 2065, 2099, 2193, 2502
MboI GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
MfeI CAATTG 1 cut(s) 1386
MflI RGATCY 3 cut(s) 404, 2191, 2500
MhlI GDGCHC 4 cut(s) 455, 1147, 1308, 1752
Mly113I GGCGCC 1 cut(s) 147
MlyI GAGTC 4 cut(s) 141, 901, 1183, 2515
MmeI TCCRAC 2 cut(s) 825, 2302
Mph1103I ATGCAT 1 cut(s) 1955
MroI TCCGGA 1 cut(s) 128
MroNI GCCGGC 1 cut(s) 143
MroXI GAANNNNTTC 3 cut(s) 689, 1657, 2370
MseI TTAA 4 cut(s) 114, 1103, 1473, 2490
MslI CAYNNNNRTG 2 cut(s) 1473, 1510
MspA1I CMGCKG 2 cut(s) 539, 2423
MspI CCGG 7 cut(s) 129, 136, 144, 939, 1562, 1608, 1959
MunI CAATTG 1 cut(s) 1386
Mva1269I GAATGC 1 cut(s) 1955
MvaI CCWGG 8 cut(s) 197, 290, 781, 858, 1399, 1821, 1848, 2469
MvnI CGCG 2 cut(s) 192, 1730
MwoI GCNNNNNNNGC 6 cut(s) 155, 370, 908, 1278, 1643, 1655
NaeI GCCGGC 1 cut(s) 145
NarI GGCGCC 1 cut(s) 147
NciI CCSGG 2 cut(s) 1609, 1960
NcoI CCATGG 2 cut(s) 765, 1508
NdeII GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
NgoMIV GCCGGC 1 cut(s) 143
NlaIV GGNNCC 6 cut(s) 148, 763, 778, 1012, 2226, 2409
NmuCI GTSAC 5 cut(s) 648, 673, 1439, 1735, 2513
NsiI ATGCAT 1 cut(s) 1955
NspI RCATGY 1 cut(s) 254
NspV TTCGAA 1 cut(s) 1237
OliI CACNNNNGTG 1 cut(s) 1510
PagI TCATGA 3 cut(s) 1530, 1708, 2353
PciI ACATGT 1 cut(s) 250
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PctI GAATGC 1 cut(s) 1955
PdiI GCCGGC 1 cut(s) 145
PdmI GAANNNNTTC 3 cut(s) 689, 1657, 2370
PfeI GAWTC 9 cut(s) 399, 443, 588, 917, 949, 2113, 2155, 2348, 2444
PflMI CCANNNNNTGG 2 cut(s) 887, 2438
PfoI TCCNGGA 2 cut(s) 288, 1958
PinAI ACCGGT 1 cut(s) 938
PkrI GCNGC 6 cut(s) 160, 191, 830, 1636, 1648, 1831
PleI GAGTC 4 cut(s) 140, 900, 1183, 2515
PluTI GGCGCC 1 cut(s) 150
PpsI GAGTC 4 cut(s) 140, 900, 1183, 2515
PscI ACATGT 1 cut(s) 250
Psp124BI GAGCTC 1 cut(s) 455
Psp6I CCWGG 8 cut(s) 195, 288, 779, 856, 1397, 1819, 1846, 2467
PspGI CCWGG 8 cut(s) 195, 288, 779, 856, 1397, 1819, 1846, 2467
PspN4I GGNNCC 6 cut(s) 148, 763, 778, 1012, 2226, 2409
PspPI GGNCC 5 cut(s) 233, 761, 776, 1478, 1844
PstI CTGCAG 1 cut(s) 1648
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 3 cut(s) 404, 2191, 2500
PvuII CAGCTG 2 cut(s) 539, 2423
RsaI GTAC 1 cut(s) 986
RsaNI GTAC 1 cut(s) 985
RseI CAYNNNNRTG 2 cut(s) 1473, 1510
SacI GAGCTC 1 cut(s) 455
SaqAI TTAA 4 cut(s) 114, 1103, 1473, 2490
SatI GCNGC 6 cut(s) 159, 190, 829, 1635, 1647, 1830
Sau3AI GATC 8 cut(s) 340, 404, 1265, 1711, 2063, 2097, 2191, 2500
Sau96I GGNCC 5 cut(s) 233, 761, 776, 1478, 1844
ScaI AGTACT 1 cut(s) 986
SchI GAGTC 4 cut(s) 141, 901, 1183, 2515
SduI GDGCHC 4 cut(s) 455, 1147, 1308, 1752
SexAI ACCWGGT 1 cut(s) 195
SfaNI GCATC 7 cut(s) 292, 335, 351, 605, 658, 1070, 1646
SfcI CTRYAG 2 cut(s) 534, 1644
SfoI GGCGCC 1 cut(s) 148
SfuI TTCGAA 1 cut(s) 1237
SinI GGWCC 3 cut(s) 233, 761, 776
SmiMI CAYNNNNRTG 2 cut(s) 1473, 1510
SmlI CTYRAG 3 cut(s) 680, 2057, 2332
SmoI CTYRAG 3 cut(s) 680, 2057, 2332
SpeI ACTAGT 1 cut(s) 1151
SsiI CCGC 7 cut(s) 120, 159, 190, 829, 839, 1203, 2251
SspDI GGCGCC 1 cut(s) 146
SspI AATATT 1 cut(s) 751
SspMI CTAG 4 cut(s) 921, 1038, 1152, 2169
SstI GAGCTC 1 cut(s) 455
StyI CCWWGG 2 cut(s) 765, 1508
TaaI ACNGT 6 cut(s) 601, 930, 1624, 1687, 1996, 2485
TaqI TCGA 2 cut(s) 904, 1237
TatI WGTACW 1 cut(s) 984
TauI GCSGC 3 cut(s) 161, 192, 831
TfiI GAWTC 9 cut(s) 399, 443, 588, 917, 949, 2113, 2155, 2348, 2444
Tru1I TTAA 4 cut(s) 114, 1103, 1473, 2490
Tru9I TTAA 4 cut(s) 114, 1103, 1473, 2490
TscAI CASTG 7 cut(s) 178, 700, 892, 1690, 1744, 1812, 1863
TseFI GTSAC 5 cut(s) 648, 673, 1439, 1735, 2513
TseI GCWGC 3 cut(s) 1634, 1646, 1829
Tsp45I GTSAC 5 cut(s) 648, 673, 1439, 1735, 2513
TspGWI ACGGA 4 cut(s) 142, 581, 1656, 2148
TspRI CASTG 7 cut(s) 178, 700, 892, 1690, 1744, 1812, 1863
Van91I CCANNNNNTGG 2 cut(s) 887, 2438
VneI GTGCAC 1 cut(s) 1304
VpaK11BI GGWCC 3 cut(s) 233, 761, 776
XagI CCTNNNNNAGG 1 cut(s) 510
XapI RAATTY 5 cut(s) 95, 689, 1033, 1455, 2179
XceI RCATGY 1 cut(s) 254
XcmI CCANNNNNNNNNTGG 2 cut(s) 1506, 2471
XmiI GTMKAC 1 cut(s) 1517
XmnI GAANNNNTTC 3 cut(s) 689, 1657, 2370
XspI CTAG 4 cut(s) 921, 1038, 1152, 2169
ZrmI AGTACT 1 cut(s) 986
Zsp2I ATGCAT 1 cut(s) 1955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.