Prupe.6G341800_v2.0.a1

Transferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0004543
Physical Location & Seq
Forward (+)
29491147 .. 29494271
3125 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G341800.1

Sequence Viewer

Length: 1377 bp
ATGTCGACGACCCAGCAGAGCCGGGTGGTGGTGCACTCAAAGCTAACGGCAGTTTCGAGCAGGCCAGTGAAGGCGGGCACTACCCACAATCTTACAGCGCTAGACCATGCAATGGGCCTCCACACCCTCCACGTAGTCTTCTACTACAAGCACAAGTTGTTCGGCTGTTTTGACTTGGACCCTTTGCGGCTCTCTCTCTCCGAGGCCCTCTCGCTGCACCCTCCGGTTATGGGTCGGATGGCTCAGAAACCCGACGGCAATTGGGAGGTTAAGTGTAATGATGCGGGTGTTCGGGTCTTCATGGCCCGGGTGGCGACCACCCTTGATGAGTGGCTCAGATCTGCTGATGGCTCCGAGGAGAGGCTTTTGACCGTCTGGGATGATATGCCTGATGATCCCAGTACTTGGTCACCCTATAGGATCCAGATAAATGAATTTGAAGGAGGAGGTGCAGCCATTGGTGTAAGTTGCACTCACATGCATGCAGACCCAACTTGTGTCACCCTACTAGTCAAGGCGTGGGCCGAGACTCACCGCAAGCAAGCAATTGCTCACCCGCTTCTCGTCGGGGAGTCATCAGCCCTCGGAGGCAGACCCGTTGATCAAGGCATAATAAAAACAAAATCAGCAGCGGCCTATTATGAAGCCAAGTCTGTGGCAGCAAAGACCCCTTTACCAGAAAAGAAAATGAGCACAGCCACTTTCAAATTCTCCAGTGCAATGATCAAGCAAGGCCTCTTACAAATCCACAAAACTTGCCCTGAAGCCAACCCTTTTGATTTGCTGGCTGCAGTGTTTTGGACAAGCATTGCGTGCTTAAAGCCCCCAAAGAGTGCCACCAAGCACTCCCTTTCAATTTGTACCGACTTTAGAAAGAAGCTGTGTTCTGGGTGGCACTATGGCAATGCCTTGCATTTTTCAATGCTTTCAGTGCCGGATGTGGAGGACGTGGAAAACACGAACTGGTTGGAGCATGTGGCAGGAGCGGTGCACCGCCACGTGTGGAGTCAGAAGGAGGAGGAGTTTTGGTCTGGAGTGGACTGGTTTGGATCACAAAAGGGAGAGGAAGGTAAGTTTGGGGCAGCATTTAGGATGTATGGCCCTGAATTGACATGTGTTAGCATGGAGCACATGAATGAGAAGGAGCCAATGATGTATGCAGCCCTGTTTGACAAGGACAAGAAGCCAGCTCATGTATCTTACCATGTGGGGAATGTGGAGGGTGAAGGGTTGATAATGGTGATGCCAGCTTCAGAAGGAGGGCTTGGAAGGATGGTTATGGTGACATTGCCAGAGGAGGAGCTGGCCCGGCTCTGTGAGGCACAACCTATTTTGAGCCTAAAACCAACAATGCTGCTAAGTGGGAAACAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

459

Amino Acids

50.56

Weight (kDa)

6.6

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 112, 405
AccBSI CCGCTC 1 cut(s) 986
AccI GTMKAC 1 cut(s) 5
AciI CCGC 8 cut(s) 74, 187, 284, 535, 557, 632, 986, 994
AclWI GGATC 4 cut(s) 389, 415, 428, 1057
AcsI RAATTY 2 cut(s) 434, 707
AcuI CTGAAG 2 cut(s) 783, 1236
AcvI CACGTG 1 cut(s) 1000
AfaI GTAC 2 cut(s) 403, 862
AfeI AGCGCT 1 cut(s) 99
AfiI CCNNNNNNNGG 5 cut(s) 28, 112, 230, 360, 405
AflIII ACRYGT 2 cut(s) 999, 1112
AgsI TTSAA 4 cut(s) 440, 706, 855, 921
AhlI ACTAGT 1 cut(s) 508
AjiI CACGTC 1 cut(s) 949
AjuI GAANNNNNNNTTGG 4 cut(s) 1059, 1091, 1248, 1280
AluBI AGCT 6 cut(s) 43, 880, 1190, 1250, 1303, 1373
AluI AGCT 6 cut(s) 43, 880, 1190, 1250, 1303, 1373
Alw21I GWGCWC 4 cut(s) 36, 695, 993, 1131
Alw26I GTCTC 1 cut(s) 521
Alw44I GTGCAC 2 cut(s) 32, 989
AlwI GGATC 4 cut(s) 389, 415, 428, 1057
Ama87I CYCGRG 1 cut(s) 306
Aor51HI AGCGCT 1 cut(s) 99
AoxI GGCC 9 cut(s) 62, 115, 204, 303, 522, 633, 733, 1099, 1305
ApaLI GTGCAC 2 cut(s) 32, 989
ApeKI GCWGC 8 cut(s) 214, 452, 629, 659, 788, 1082, 1160, 1354
ApoI RAATTY 2 cut(s) 434, 707
AspLEI GCGC 1 cut(s) 100
AspS9I GGNCC 7 cut(s) 115, 178, 205, 304, 522, 1100, 1306
AsuC2I CCSGG 4 cut(s) 23, 307, 308, 1309
AsuHPI GGTGA 7 cut(s) 402, 493, 524, 545, 1235, 1252, 1294
AvaI CYCGRG 1 cut(s) 306
AvaII GGWCC 1 cut(s) 178
BaeGI GKGCMC 3 cut(s) 36, 80, 993
BamHI GGATCC 1 cut(s) 420
BbrPI CACGTG 1 cut(s) 1000
BbsI GAAGAC 2 cut(s) 130, 289
Bbv12I GWGCWC 4 cut(s) 36, 695, 993, 1131
BbvI GCAGC 8 cut(s) 201, 464, 641, 671, 775, 1094, 1172, 1341
BccI CCATC 3 cut(s) 232, 341, 1267
BceAI ACGGC 2 cut(s) 63, 271
BclI TGATCA 2 cut(s) 601, 723
BcnI CCSGG 4 cut(s) 23, 307, 308, 1309
BcoDI GTCTC 1 cut(s) 521
BcuI ACTAGT 1 cut(s) 508
BfaI CTAG 2 cut(s) 101, 509
BfmI CTRYAG 2 cut(s) 415, 789
BfoI RGCGCY 1 cut(s) 101
BglI GCCNNNNNGGC 1 cut(s) 311
BglII AGATCT 1 cut(s) 338
BmcAI AGTACT 1 cut(s) 403
Bme1390I CCNGG 4 cut(s) 23, 307, 308, 1309
Bme18I GGWCC 1 cut(s) 178
BmeT110I CYCGRG 1 cut(s) 306
BmgBI CACGTC 1 cut(s) 949
BmgT120I GGNCC 7 cut(s) 115, 178, 205, 304, 522, 1100, 1306
BmiI GGNNCC 4 cut(s) 180, 352, 422, 1146
BmrFI CCNGG 4 cut(s) 23, 307, 308, 1309
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 2 cut(s) 271, 1233
BmuI ACTGGG 1 cut(s) 393
BpiI GAAGAC 2 cut(s) 130, 289
BplI GAGNNNNNCTC 2 cut(s) 194, 226
BpmI CTGGAG 2 cut(s) 697, 1053
BpuMI CCSGG 4 cut(s) 23, 307, 308, 1309
BsaAI YACGTR 2 cut(s) 133, 1000
BsaJI CCNNGG 4 cut(s) 201, 306, 354, 583
BsaWI WCCGGW 1 cut(s) 223
BsaXI ACNNNNNCTCC 6 cut(s) 257, 287, 1007, 1013, 1037, 1043
Bsc4I CCNNNNNNNGG 5 cut(s) 28, 112, 230, 360, 405
Bse1I ACTGG 5 cut(s) 65, 399, 714, 968, 1046
Bse3DI GCAATG 5 cut(s) 117, 726, 807, 910, 1286
BseDI CCNNGG 4 cut(s) 201, 306, 354, 583
BseGI GGATG 5 cut(s) 243, 385, 943, 1098, 1278
BseLI CCNNNNNNNGG 5 cut(s) 28, 112, 230, 360, 405
BseMI GCAATG 5 cut(s) 117, 726, 807, 910, 1286
BseMII CTCAG 2 cut(s) 257, 349
BseNI ACTGG 5 cut(s) 65, 399, 714, 968, 1046
BseRI GAGGAG 6 cut(s) 371, 459, 1031, 1034, 1310, 1313
BseSI GKGCMC 3 cut(s) 36, 80, 993
BseXI GCAGC 8 cut(s) 201, 464, 641, 671, 775, 1094, 1172, 1341
BseYI CCCAGC 1 cut(s) 12
BsgI GTGCAG 2 cut(s) 200, 471
BshFI GGCC 9 cut(s) 64, 117, 206, 305, 524, 635, 735, 1101, 1307
BsiHKAI GWGCWC 4 cut(s) 36, 695, 993, 1131
BsiHKCI CYCGRG 1 cut(s) 306
BsiSI CCGG 5 cut(s) 22, 224, 307, 935, 1309
BslI CCNNNNNNNGG 5 cut(s) 28, 112, 230, 360, 405
BsmAI GTCTC 1 cut(s) 521
BsnI GGCC 9 cut(s) 64, 117, 206, 305, 524, 635, 735, 1101, 1307
BsoBI CYCGRG 1 cut(s) 306
Bsp1286I GDGCHC 5 cut(s) 36, 80, 695, 993, 1131
Bsp143I GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
BspACI CCGC 8 cut(s) 74, 187, 284, 535, 557, 632, 986, 994
BspANI GGCC 9 cut(s) 64, 117, 206, 305, 524, 635, 735, 1101, 1307
BspCNI CTCAG 2 cut(s) 256, 348
BspLI GGNNCC 4 cut(s) 180, 352, 422, 1146
BspMAI CTGCAG 1 cut(s) 793
BspPI GGATC 4 cut(s) 389, 415, 428, 1057
BsrBI CCGCTC 1 cut(s) 986
BsrDI GCAATG 5 cut(s) 117, 726, 807, 910, 1286
BsrI ACTGG 5 cut(s) 65, 399, 714, 968, 1046
BssECI CCNNGG 4 cut(s) 201, 306, 354, 583
BssMI GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
Bst4CI ACNGT 1 cut(s) 373
BstAPI GCANNNNNTGC 1 cut(s) 813
BstBAI YACGTR 2 cut(s) 133, 1000
BstDEI CTNAG 3 cut(s) 243, 335, 1358
BstEII GGTNACC 1 cut(s) 408
BstF5I GGATG 5 cut(s) 243, 385, 943, 1098, 1278
BstH2I RGCGCY 1 cut(s) 101
BstHHI GCGC 1 cut(s) 100
BstKTI GATC 6 cut(s) 341, 397, 423, 604, 726, 1052
BstMAI GTCTC 1 cut(s) 521
BstMBI GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
BstMWI GCNNNNNNNGC 5 cut(s) 40, 311, 813, 931, 1309
BstNSI RCATGY 4 cut(s) 481, 485, 977, 1116
BstPI GGTNACC 1 cut(s) 408
BstSCI CCNGG 4 cut(s) 21, 305, 306, 1307
BstSFI CTRYAG 2 cut(s) 415, 789
BstSLI GKGCMC 3 cut(s) 36, 80, 993
BstV1I GCAGC 8 cut(s) 201, 464, 641, 671, 775, 1094, 1172, 1341
BstV2I GAAGAC 2 cut(s) 130, 289
BstX2I RGATCY 2 cut(s) 338, 420
BstXI CCANNNNNNTGG 1 cut(s) 655
BstYI RGATCY 2 cut(s) 338, 420
BsuRI GGCC 9 cut(s) 64, 117, 206, 305, 524, 635, 735, 1101, 1307
BtrI CACGTC 1 cut(s) 949
BtsCI GGATG 5 cut(s) 243, 385, 943, 1098, 1278
BtsI GCAGTG 1 cut(s) 798
BtsIMutI CAGTG 4 cut(s) 72, 721, 798, 936
CfoI GCGC 1 cut(s) 100
Cfr13I GGNCC 7 cut(s) 115, 178, 205, 304, 522, 1100, 1306
Cfr9I CCCGGG 1 cut(s) 306
Csp6I GTAC 2 cut(s) 402, 861
CspCI CAANNNNNGTGG 2 cut(s) 737, 772
CviQI GTAC 2 cut(s) 402, 861
DdeI CTNAG 3 cut(s) 243, 335, 1358
DpnI GATC 6 cut(s) 340, 396, 422, 603, 725, 1051
DpnII GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
Eco147I AGGCCT 1 cut(s) 735
Eco47I GGWCC 1 cut(s) 178
Eco47III AGCGCT 1 cut(s) 99
Eco57I CTGAAG 2 cut(s) 783, 1236
Eco72I CACGTG 1 cut(s) 1000
Eco88I CYCGRG 1 cut(s) 306
Eco91I GGTNACC 1 cut(s) 408
EcoO109I RGGNCCY 1 cut(s) 205
EcoO65I GGTNACC 1 cut(s) 408
EcoT22I ATGCAT 1 cut(s) 483
FalI AAGNNNNNCTT 2 cut(s) 1248, 1280
FauI CCCGC 3 cut(s) 67, 277, 564
FbaI TGATCA 2 cut(s) 601, 723
FblI GTMKAC 1 cut(s) 5
FokI GGATG 5 cut(s) 250, 392, 950, 1105, 1285
FspBI CTAG 2 cut(s) 101, 509
GlaI GCGC 1 cut(s) 99
GsaI CCCAGC 1 cut(s) 16
GsuI CTGGAG 2 cut(s) 697, 1053
HaeII RGCGCY 1 cut(s) 101
HaeIII GGCC 9 cut(s) 64, 117, 206, 305, 524, 635, 735, 1101, 1307
HapII CCGG 5 cut(s) 22, 224, 307, 935, 1309
HhaI GCGC 1 cut(s) 100
Hin6I GCGC 1 cut(s) 98
HinP1I GCGC 1 cut(s) 98
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 1371
HinfI GANTC 3 cut(s) 529, 572, 1006
HpaII CCGG 5 cut(s) 22, 224, 307, 935, 1309
HphI GGTGA 7 cut(s) 402, 493, 524, 545, 1235, 1252, 1294
Hpy166II GTNNAC 4 cut(s) 6, 34, 991, 1039
Hpy188I TCNGA 8 cut(s) 202, 237, 246, 338, 355, 587, 1011, 1255
Hpy188III TCNNGA 2 cut(s) 424, 1032
Hpy8I GTNNAC 4 cut(s) 6, 34, 991, 1039
Hpy99I CGWCG 3 cut(s) 10, 257, 569
HpyAV CCTTC 8 cut(s) 64, 434, 1006, 1061, 1135, 1220, 1250, 1263
HpyCH4III ACNGT 1 cut(s) 373
HpyCH4IV ACGT 3 cut(s) 132, 948, 999
HpyF10VI GCNNNNNNNGC 5 cut(s) 40, 311, 813, 931, 1309
HpyF3I CTNAG 3 cut(s) 243, 335, 1358
HpySE526I ACGT 3 cut(s) 132, 948, 999
HspAI GCGC 1 cut(s) 98
Ksp22I TGATCA 2 cut(s) 601, 723
Kzo9I GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
LmnI GCTCC 6 cut(s) 356, 970, 983, 1126, 1144, 1300
Lsp1109I GCAGC 8 cut(s) 201, 464, 641, 671, 775, 1094, 1172, 1341
LweI GCATC 2 cut(s) 271, 1233
MaeI CTAG 2 cut(s) 101, 509
MaeII ACGT 3 cut(s) 132, 948, 999
MaeIII GTNAC 3 cut(s) 408, 499, 1282
MalI GATC 6 cut(s) 340, 396, 422, 603, 725, 1051
MbiI CCGCTC 1 cut(s) 986
MboI GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
MboII GAAGA 2 cut(s) 130, 289
MfeI CAATTG 2 cut(s) 259, 546
MflI RGATCY 2 cut(s) 338, 420
MhlI GDGCHC 5 cut(s) 36, 80, 695, 993, 1131
MluCI AATT 6 cut(s) 259, 434, 546, 707, 855, 1106
MlyI GAGTC 3 cut(s) 523, 581, 1015
MmeI TCCRAC 2 cut(s) 215, 948
Mph1103I ATGCAT 1 cut(s) 483
MseI TTAA 2 cut(s) 270, 818
MslI CAYNNNNRTG 3 cut(s) 476, 480, 1134
MspA1I CMGCKG 1 cut(s) 632
MspI CCGG 5 cut(s) 22, 224, 307, 935, 1309
MspR9I CCNGG 4 cut(s) 23, 307, 308, 1309
MunI CAATTG 2 cut(s) 259, 546
MwoI GCNNNNNNNGC 5 cut(s) 40, 311, 813, 931, 1309
NciI CCSGG 4 cut(s) 23, 307, 308, 1309
NdeII GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
NlaIV GGNNCC 4 cut(s) 180, 352, 422, 1146
NmeAIII GCCGAG 1 cut(s) 550
NmuCI GTSAC 3 cut(s) 408, 499, 1282
NsiI ATGCAT 1 cut(s) 483
NspI RCATGY 4 cut(s) 481, 485, 977, 1116
PaeI GCATGC 1 cut(s) 485
PceI AGGCCT 1 cut(s) 735
PciI ACATGT 1 cut(s) 1112
PcsI WCGNNNNNNNCGW 1 cut(s) 53
PflMI CCANNNNNTGG 2 cut(s) 112, 405
PleI GAGTC 3 cut(s) 523, 580, 1014
PmaCI CACGTG 1 cut(s) 1000
PmlI CACGTG 1 cut(s) 1000
PpsI GAGTC 3 cut(s) 523, 580, 1014
Ppu21I YACGTR 2 cut(s) 133, 1000
PscI ACATGT 1 cut(s) 1112
PspCI CACGTG 1 cut(s) 1000
PspEI GGTNACC 1 cut(s) 408
PspFI CCCAGC 1 cut(s) 12
PspN4I GGNNCC 4 cut(s) 180, 352, 422, 1146
PspPI GGNCC 7 cut(s) 115, 178, 205, 304, 522, 1100, 1306
PstI CTGCAG 1 cut(s) 793
PsuI RGATCY 2 cut(s) 338, 420
RsaI GTAC 2 cut(s) 403, 862
RsaNI GTAC 2 cut(s) 402, 861
RseI CAYNNNNRTG 3 cut(s) 476, 480, 1134
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 2 cut(s) 270, 818
Sau3AI GATC 6 cut(s) 338, 394, 420, 601, 723, 1049
Sau96I GGNCC 7 cut(s) 115, 178, 205, 304, 522, 1100, 1306
ScaI AGTACT 1 cut(s) 403
SchI GAGTC 3 cut(s) 523, 581, 1015
ScrFI CCNGG 4 cut(s) 23, 307, 308, 1309
SduI GDGCHC 5 cut(s) 36, 80, 695, 993, 1131
SfaNI GCATC 2 cut(s) 271, 1233
SfcI CTRYAG 2 cut(s) 415, 789
SinI GGWCC 1 cut(s) 178
SmaI CCCGGG 1 cut(s) 308
SmiMI CAYNNNNRTG 3 cut(s) 476, 480, 1134
SpeI ACTAGT 1 cut(s) 508
SphI GCATGC 1 cut(s) 485
Sse9I AATT 6 cut(s) 259, 434, 546, 707, 855, 1106
SseBI AGGCCT 1 cut(s) 735
SsiI CCGC 8 cut(s) 74, 187, 284, 535, 557, 632, 986, 994
SspMI CTAG 2 cut(s) 101, 509
StuI AGGCCT 1 cut(s) 735
StyD4I CCNGG 4 cut(s) 21, 305, 306, 1307
TaaI ACNGT 1 cut(s) 373
TaiI ACGT 3 cut(s) 135, 951, 1002
TaqI TCGA 2 cut(s) 5, 56
TasI AATT 6 cut(s) 259, 434, 546, 707, 855, 1106
TatI WGTACW 1 cut(s) 401
TauI GCSGC 2 cut(s) 190, 635
Tru1I TTAA 2 cut(s) 270, 818
Tru9I TTAA 2 cut(s) 270, 818
TscAI CASTG 4 cut(s) 72, 721, 798, 936
TseFI GTSAC 3 cut(s) 408, 499, 1282
TseI GCWGC 8 cut(s) 214, 452, 629, 659, 788, 1082, 1160, 1354
Tsp45I GTSAC 3 cut(s) 408, 499, 1282
TspDTI ATGAA 4 cut(s) 289, 447, 657, 1148
TspMI CCCGGG 1 cut(s) 306
TspRI CASTG 4 cut(s) 72, 721, 798, 936
Van91I CCANNNNNTGG 2 cut(s) 112, 405
VneI GTGCAC 2 cut(s) 32, 989
VpaK11BI GGWCC 1 cut(s) 178
XapI RAATTY 2 cut(s) 434, 707
XceI RCATGY 4 cut(s) 481, 485, 977, 1116
XmaI CCCGGG 1 cut(s) 306
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 2 cut(s) 101, 509
ZrmI AGTACT 1 cut(s) 403
Zsp2I ATGCAT 1 cut(s) 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.