Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0004543

Physical Location & Seq

Genomic Coordinates Forward (+)

23024082 .. 23027556

Gene Structure 3475 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g21960.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGATGATTGAACTCGAAAACTCGAGTGTATTGTTGTGGTGGGAATGCACTCGATACGTCGTATATATTGCTACAAAACCCCACAGAATCCACGGAAGTTCAAAACTATTATCCTCTCTGTTTCTCTCTATATTGCTATCTGTGAAAATGCCGGCGGCTGATGGGAGGAGCAGGGTGGTGGTGCACTCAAAGCTGACGGTAGTGTCGAGCAGGCCGGTGGTGCCGGGGAAGGCCCACACGTTCACGGCACTGGACCATGCAATGGGACTGCACAGTCTCCACGTTGTTTTCTACTACAAGGAGCAGCTGTTCGGGTCTATTGACTTGGACCCGCTCCGGGTCTCGCTCTCGGAGACCCTGTCTCTCTACCCGCAGGTTACGGGTCGGGTGGACAAGAACCCGGACGGGAATTGGGAGGTGAAGTGCAATGATGCGGGGGTTCGGGTCTTGATGGCCCGGGTGGGGACCACGCTTGATGAGTGGCTGACATCTGGGGTTGGGTCCGAGGAGAGGCTTTTGACGATGTGGGATGATATGCCTGATGATCACAGTACCTGGTCGCCGTATAGGATCCAGATAAATGAATTTGAAGGAGGAGGTGTAGCAATTGGACTAAGTTGCACTCACATGCATGCTGACCCAACTTGTGCCACCCTACTCATCAAGTCGTGGGCTGAGACTCACCGCCGAGAAGCGATTTCGCACCCGCTTTTCGTCGACGAGTCATCAGCCCTTAGGGGACGGCCCGTTGATCAGGTCATAAACAAAAAATCATCAGCTGCCTATTATGAAGCCAAGTCCGTGGCATCAAAGACCACTTCCTTGCCTGTGAAGAAAATGGGGACAGCCACATTCAAGTTTTCCAATTCCACGATCAAGCGAGAACTAAACTCATGCCCTGGTGCCACTCCATTTGATCTGCTTGCTGCAATGTTTTGGACTCAAATTGCGCGCTTGAAGCCCTCGGAGAGCAAGACCAAACACTCCTTCTCAGTTTGCATAGACTTTCGAAAGAAGAAGTCCTTCGGGTACTACGGCAATGCCTTGCATTTTTCGTTGCTTTCAGTACCGGATGTGGAGGAATTGGAGCGCGAGGACGGGCTGGCACACGTCGTAGGGGTGGTGCACCGCCATGTATCGAGTCAGAAGGAGGAGGACTTTTGGTCCGGAATGGATTGGAAAGAAGCACAAAAGGGAGAGGGAGATAAGTTTGGAGAACCAGTTAAGCTGTATGGCCCTGAGTTGACTTGTGTTAGCATGGAGCACATGCTGGACCACTGTCAGCCGTTGATGTATGGAGTTATGTTTGAGAAGGAGAAGAAACCAGTTCACGTGTCGTATCATGTGGGGAATATGGAAGGGGAAGGTTTGATCATGGTGATGCCGGCGCCAGAAGGCGGGCTCGCAAGGACGGTTATGGTGACATTGCCGGAGGAGGAGCTTGCCCAATTATGTGAGGCAGAAGCTATTTCGAGCCTTAACCCTACAATGCTCCTAAGTGGGAGACAAGCTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

506

Amino Acids

56.23

Weight (kDa)

6.24

Isoelectric Point (pI)

37.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004543)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g03080 FvH4_6g03120
malus_domestica	MD12G1238900.v1.1
prunus_persica	Prupe.6G341800_v2.0.a1
pyrus_communis	pycom12g21960
rosa_chinensis	RchiOBHm_Chr3g0451351 RchiOBHm_Chr5g0046431 RchiOBHm_Chr5g0046531
rosa_laevigata	RLG00000025665 RLG00000025670
rosa_multiflora	Rmu_sc0002575.1_g000008 Rmu_sc0003878.1_g000045 Rmu_sc0003878.1_g000046 Rmu_sc0012229.1_g000007
rosa_roxburghii	Rroxscaffold_163G00450830 Rroxscaffold_164G00436560 Rroxscaffold_1G00034900 Rroxscaffold_3G00232570 Rroxscaffold_6G00428770
rosa_rugosa	Rorug02G0633200 Rorug05G0229400
rosa_samantha	Rh3AG036200 Rh3BG036700 Rh3CG035300 Rh3DG036200 Rh5AG309300 Rh5BG317500 Rh5BG318000 Rh5DG327800 Rh5DG328200
rosa_wichuraiana	Rw0G015940 Rw3G002670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	202, 273
Acc36I	ACCTGC	1 cut(s)	364
AccB1I	GGYRCC	3 cut(s)	220, 902, 1387
AccB7I	CCANNNNNTGG	1 cut(s)	262
AccBSI	CCGCTC	1 cut(s)	334
AccI	GTMKAC	1 cut(s)	717
AccII	CGCG	2 cut(s)	952, 1092
AccIII	TCCGGA	1 cut(s)	1166
AciI	CCGC	8 cut(s)	155, 332, 371, 434, 685, 707, 1129, 1398
AclWI	GGATC	2 cut(s)	565, 578
AcsI	RAATTY	1 cut(s)	584
AcvI	CACGTG	1 cut(s)	1333
AcyI	GRCGYC	1 cut(s)	1388
AfaI	GTAC	3 cut(s)	553, 1031, 1068
AfiI	CCNNNNNNNGG	5 cut(s)	262, 337, 462, 510, 1397
AflIII	ACRYGT	3 cut(s)	237, 1108, 1332
AgsI	TTSAA	5 cut(s)	11, 102, 590, 856, 958
AhdI	GACNNNNNGTC	1 cut(s)	1162
AjiI	CACGTC	1 cut(s)	1111
AjnI	CCWGG	2 cut(s)	554, 898
AjuI	GAANNNNNNNTTGG	2 cut(s)	971, 1003
AloI	GAACNNNNNNTCC	2 cut(s)	293, 325
AluBI	AGCT	7 cut(s)	193, 307, 779, 1228, 1441, 1466, 1511
AluI	AGCT	7 cut(s)	193, 307, 779, 1228, 1441, 1466, 1511
Alw21I	GWGCWC	3 cut(s)	186, 1128, 1266
Alw26I	GTCTC	6 cut(s)	281, 346, 347, 366, 671, 1498
Alw44I	GTGCAC	2 cut(s)	182, 1124
AlwI	GGATC	2 cut(s)	565, 578
AlwNI	CAGNNNCTG	1 cut(s)	555
Ama87I	CYCGRG	2 cut(s)	22, 456
Aor13HI	TCCGGA	1 cut(s)	1166
AoxI	GGCC	5 cut(s)	212, 231, 453, 743, 1234
ApaLI	GTGCAC	2 cut(s)	182, 1124
ApeKI	GCWGC	3 cut(s)	304, 779, 926
ApoI	RAATTY	1 cut(s)	584
Asp700I	GAANNNNTTC	1 cut(s)	1022
AspLEI	GCGC	4 cut(s)	952, 954, 1092, 1390
AsuC2I	CCSGG	5 cut(s)	225, 338, 401, 457, 458
AsuHPI	GGTGA	4 cut(s)	430, 674, 1390, 1432
AsuII	TTCGAA	1 cut(s)	1009
AvaI	CYCGRG	2 cut(s)	22, 456
AvaII	GGWCC	6 cut(s)	253, 328, 465, 501, 1164, 1273
AxyI	CCTNAGG	1 cut(s)	734
BaeGI	GKGCMC	2 cut(s)	186, 1128
BamHI	GGATCC	1 cut(s)	570
BanI	GGYRCC	3 cut(s)	220, 902, 1387
BanII	GRGCYC	1 cut(s)	1404
BbrPI	CACGTG	1 cut(s)	1333
Bbv12I	GWGCWC	3 cut(s)	186, 1128, 1266
BbvI	GCAGC	3 cut(s)	316, 766, 913
BccI	CCATC	2 cut(s)	155, 445
BceAI	ACGGC	5 cut(s)	261, 547, 758, 1051, 1270
BciT130I	CCWGG	2 cut(s)	556, 900
BclI	TGATCA	3 cut(s)	544, 751, 1371
BcnI	CCSGG	5 cut(s)	225, 338, 401, 457, 458
BcoDI	GTCTC	6 cut(s)	281, 346, 347, 366, 671, 1498
BfoI	RGCGCY	1 cut(s)	1391
BfuAI	ACCTGC	1 cut(s)	364
BisI	GCNGC	4 cut(s)	156, 305, 780, 927
BlsI	GCNGC	4 cut(s)	157, 306, 781, 928
Bme1390I	CCNGG	7 cut(s)	225, 338, 401, 457, 458, 556, 900
Bme18I	GGWCC	6 cut(s)	253, 328, 465, 501, 1164, 1273
BmeRI	GACNNNNNGTC	1 cut(s)	1162
BmeT110I	CYCGRG	2 cut(s)	22, 456
BmgBI	CACGTC	1 cut(s)	1111
BmiI	GGNNCC	7 cut(s)	222, 330, 466, 502, 572, 904, 1389
BmrFI	CCNGG	7 cut(s)	225, 338, 401, 457, 458, 556, 900
BmsI	GCATC	3 cut(s)	421, 815, 1371
BoxI	GACNNNNGTC	1 cut(s)	1278
Bpu14I	TTCGAA	1 cut(s)	1009
BpuMI	CCSGG	5 cut(s)	225, 338, 401, 457, 458
BsaAI	YACGTR	1 cut(s)	1333
BsaHI	GRCGYC	1 cut(s)	1388
BsaI	GGTCTC	2 cut(s)	346, 347
BsaJI	CCNNGG	7 cut(s)	91, 224, 456, 504, 801, 898, 963
BsaWI	WCCGGW	2 cut(s)	1069, 1166
Bsc4I	CCNNNNNNNGG	5 cut(s)	262, 337, 462, 510, 1397
Bse118I	RCCGGY	3 cut(s)	151, 214, 1384
Bse1I	ACTGG	3 cut(s)	255, 1220, 1325
Bse21I	CCTNAGG	1 cut(s)	734
Bse3DI	GCAATG	5 cut(s)	267, 433, 936, 1045, 1424
BseAI	TCCGGA	1 cut(s)	1166
BseBI	CCWGG	2 cut(s)	556, 900
BseDI	CCNNGG	7 cut(s)	91, 224, 456, 504, 801, 898, 963
BseGI	GGATG	2 cut(s)	535, 1078
BseLI	CCNNNNNNNGG	5 cut(s)	262, 337, 462, 510, 1397
BseMI	GCAATG	5 cut(s)	267, 433, 936, 1045, 1424
BseMII	CTCAG	3 cut(s)	666, 1005, 1230
BseNI	ACTGG	3 cut(s)	255, 1220, 1325
BsePI	GCGCGC	1 cut(s)	950
BseRI	GAGGAG	6 cut(s)	181, 521, 609, 1166, 1448, 1451
BseSI	GKGCMC	2 cut(s)	186, 1128
BseXI	GCAGC	3 cut(s)	316, 766, 913
BsgI	GTGCAG	1 cut(s)	254
Bsh1236I	CGCG	2 cut(s)	952, 1092
BshFI	GGCC	5 cut(s)	214, 233, 455, 745, 1236
BshNI	GGYRCC	3 cut(s)	220, 902, 1387
BsiHKAI	GWGCWC	3 cut(s)	186, 1128, 1266
BsiHKCI	CYCGRG	2 cut(s)	22, 456
BslFI	GGGAC	4 cut(s)	279, 478, 753, 856
BslI	CCNNNNNNNGG	5 cut(s)	262, 337, 462, 510, 1397
BsmAI	GTCTC	6 cut(s)	281, 346, 347, 366, 671, 1498
BsmFI	GGGAC	4 cut(s)	279, 478, 753, 856
BsmI	GAATGC	1 cut(s)	50
BsnI	GGCC	5 cut(s)	214, 233, 455, 745, 1236
Bso31I	GGTCTC	2 cut(s)	346, 347
BsoBI	CYCGRG	2 cut(s)	22, 456
Bsp119I	TTCGAA	1 cut(s)	1009
Bsp1286I	GDGCHC	4 cut(s)	186, 1128, 1266, 1404
Bsp13I	TCCGGA	1 cut(s)	1166
Bsp143I	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
BspACI	CCGC	8 cut(s)	155, 332, 371, 434, 685, 707, 1129, 1398
BspANI	GGCC	5 cut(s)	214, 233, 455, 745, 1236
BspCNI	CTCAG	3 cut(s)	667, 1004, 1231
BspEI	TCCGGA	1 cut(s)	1166
BspFNI	CGCG	2 cut(s)	952, 1092
BspLI	GGNNCC	7 cut(s)	222, 330, 466, 502, 572, 904, 1389
BspMI	ACCTGC	1 cut(s)	364
BspPI	GGATC	2 cut(s)	565, 578
BspT104I	TTCGAA	1 cut(s)	1009
BspT107I	GGYRCC	3 cut(s)	220, 902, 1387
BspTNI	GGTCTC	2 cut(s)	346, 347
BsrBI	CCGCTC	1 cut(s)	334
BsrDI	GCAATG	5 cut(s)	267, 433, 936, 1045, 1424
BsrFI	RCCGGY	3 cut(s)	151, 214, 1384
BsrI	ACTGG	3 cut(s)	255, 1220, 1325
BssAI	RCCGGY	3 cut(s)	151, 214, 1384
BssECI	CCNNGG	7 cut(s)	91, 224, 456, 504, 801, 898, 963
BssHII	GCGCGC	1 cut(s)	950
BssMI	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
BssNI	GRCGYC	1 cut(s)	1388
Bst2UI	CCWGG	2 cut(s)	556, 900
Bst4CI	ACNGT	5 cut(s)	199, 275, 551, 1280, 1414
BstACI	GRCGYC	1 cut(s)	1388
BstBAI	YACGTR	1 cut(s)	1333
BstBI	TTCGAA	1 cut(s)	1009
BstDEI	CTNAG	6 cut(s)	614, 675, 734, 991, 1239, 1496
BstDSI	CCRYGG	2 cut(s)	91, 801
BstF5I	GGATG	2 cut(s)	535, 1078
BstFNI	CGCG	2 cut(s)	952, 1092
BstH2I	RGCGCY	1 cut(s)	1391
BstHHI	GCGC	4 cut(s)	952, 954, 1092, 1390
BstKTI	GATC	6 cut(s)	547, 573, 754, 876, 919, 1374
BstMAI	GTCTC	6 cut(s)	281, 346, 347, 366, 671, 1498
BstMBI	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
BstMWI	GCNNNNNNNGC	3 cut(s)	190, 220, 958
BstNI	CCWGG	2 cut(s)	556, 900
BstNSI	RCATGY	3 cut(s)	631, 635, 1270
BstPAI	GACNNNNGTC	1 cut(s)	1278
BstSCI	CCNGG	7 cut(s)	223, 336, 399, 455, 456, 554, 898
BstSLI	GKGCMC	2 cut(s)	186, 1128
BstUI	CGCG	2 cut(s)	952, 1092
BstV1I	GCAGC	3 cut(s)	316, 766, 913
BstX2I	RGATCY	1 cut(s)	570
BstXI	CCANNNNNNTGG	1 cut(s)	802
BstYI	RGATCY	1 cut(s)	570
Bsu36I	CCTNAGG	1 cut(s)	734
BsuRI	GGCC	5 cut(s)	214, 233, 455, 745, 1236
BtgI	CCRYGG	2 cut(s)	91, 801
BtrI	CACGTC	1 cut(s)	1111
BtsCI	GGATG	2 cut(s)	535, 1078
BtsIMutI	CAGTG	2 cut(s)	248, 1276
BveI	ACCTGC	1 cut(s)	364
CaiI	CAGNNNCTG	1 cut(s)	555
CfoI	GCGC	4 cut(s)	952, 954, 1092, 1390
Cfr10I	RCCGGY	3 cut(s)	151, 214, 1384
Cfr9I	CCCGGG	1 cut(s)	456
CsiI	ACCWGGT	1 cut(s)	554
Csp6I	GTAC	3 cut(s)	552, 1030, 1067
CspCI	CAANNNNNGTGG	2 cut(s)	895, 930
CviAII	CATG	9 cut(s)	257, 628, 632, 894, 1133, 1258, 1267, 1343, 1375
CviQI	GTAC	3 cut(s)	552, 1030, 1067
DdeI	CTNAG	6 cut(s)	614, 675, 734, 991, 1239, 1496
DinI	GGCGCC	1 cut(s)	1389
DpnI	GATC	6 cut(s)	546, 572, 753, 875, 918, 1373
DpnII	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
DrdI	GACNNNNNNGTC	2 cut(s)	202, 273
DriI	GACNNNNNGTC	1 cut(s)	1162
DseDI	GACNNNNNNGTC	2 cut(s)	202, 273
Eam1105I	GACNNNNNGTC	1 cut(s)	1162
Eco24I	GRGCYC	1 cut(s)	1404
Eco31I	GGTCTC	2 cut(s)	346, 347
Eco47I	GGWCC	6 cut(s)	253, 328, 465, 501, 1164, 1273
Eco72I	CACGTG	1 cut(s)	1333
Eco81I	CCTNAGG	1 cut(s)	734
Eco88I	CYCGRG	2 cut(s)	22, 456
EcoRII	CCWGG	2 cut(s)	554, 898
EcoT22I	ATGCAT	1 cut(s)	633
EcoT38I	GRGCYC	1 cut(s)	1404
EgeI	GGCGCC	1 cut(s)	1389
EheI	GGCGCC	1 cut(s)	1389
FaeI	CATG	9 cut(s)	260, 631, 635, 897, 1136, 1261, 1270, 1346, 1378
FalI	AAGNNNNNCTT	2 cut(s)	1007, 1039
FaqI	GGGAC	4 cut(s)	279, 478, 753, 856
FatI	CATG	9 cut(s)	256, 627, 631, 893, 1132, 1257, 1266, 1342, 1374
FauI	CCCGC	5 cut(s)	339, 378, 427, 714, 1391
FbaI	TGATCA	3 cut(s)	544, 751, 1371
FblI	GTMKAC	1 cut(s)	717
Fnu4HI	GCNGC	4 cut(s)	156, 305, 780, 927
FokI	GGATG	2 cut(s)	542, 1085
FriOI	GRGCYC	1 cut(s)	1404
Fsp4HI	GCNGC	4 cut(s)	156, 305, 780, 927
GlaI	GCGC	4 cut(s)	951, 953, 1091, 1389
GluI	GCNGC	4 cut(s)	156, 305, 780, 927
HaeII	RGCGCY	1 cut(s)	1391
HaeIII	GGCC	5 cut(s)	214, 233, 455, 745, 1236
HhaI	GCGC	4 cut(s)	952, 954, 1092, 1390
Hin1I	GRCGYC	1 cut(s)	1388
Hin1II	CATG	9 cut(s)	260, 631, 635, 897, 1136, 1261, 1270, 1346, 1378
Hin6I	GCGC	4 cut(s)	950, 952, 1090, 1388
HinP1I	GCGC	4 cut(s)	950, 952, 1090, 1388
HincII	GTYRAC	2 cut(s)	718, 1245
HindII	GTYRAC	2 cut(s)	718, 1245
HinfI	GANTC	5 cut(s)	87, 679, 722, 940, 1141
HphI	GGTGA	4 cut(s)	430, 674, 1390, 1432
Hpy166II	GTNNAC	7 cut(s)	184, 243, 391, 718, 1126, 1245, 1330
Hpy188I	TCNGA	4 cut(s)	352, 505, 967, 1146
Hpy188III	TCNNGA	3 cut(s)	448, 574, 1167
Hpy8I	GTNNAC	7 cut(s)	184, 243, 391, 718, 1126, 1245, 1330
Hpy99I	CGWCG	4 cut(s)	62, 719, 722, 1115
HpyAV	CCTTC	9 cut(s)	223, 584, 997, 1033, 1141, 1306, 1352, 1358, 1388
HpyCH4III	ACNGT	5 cut(s)	199, 275, 551, 1280, 1414
HpyCH4IV	ACGT	5 cut(s)	57, 239, 282, 1110, 1332
HpyF10VI	GCNNNNNNNGC	3 cut(s)	190, 220, 958
HpyF3I	CTNAG	6 cut(s)	614, 675, 734, 991, 1239, 1496
HpySE526I	ACGT	5 cut(s)	57, 239, 282, 1110, 1332
Hsp92I	GRCGYC	1 cut(s)	1388
Hsp92II	CATG	9 cut(s)	260, 631, 635, 897, 1136, 1261, 1270, 1346, 1378
HspAI	GCGC	4 cut(s)	950, 952, 1090, 1388
KasI	GGCGCC	1 cut(s)	1387
Kpn2I	TCCGGA	1 cut(s)	1166
KroI	GCCGGC	2 cut(s)	151, 1384
KroNI	GCCGGC	2 cut(s)	153, 1386
Ksp22I	TGATCA	3 cut(s)	544, 751, 1371
Kzo9I	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
LmnI	GCTCC	7 cut(s)	168, 301, 339, 1087, 1261, 1438, 1497
Lsp1109I	GCAGC	3 cut(s)	316, 766, 913
LweI	GCATC	3 cut(s)	421, 815, 1371
MabI	ACCWGGT	1 cut(s)	554
MaeII	ACGT	5 cut(s)	57, 239, 282, 1110, 1332
MaeIII	GTNAC	2 cut(s)	376, 1420
MalI	GATC	6 cut(s)	546, 572, 753, 875, 918, 1373
MbiI	CCGCTC	1 cut(s)	334
MboI	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
MboII	GAAGA	3 cut(s)	844, 1027, 1330
MfeI	CAATTG	1 cut(s)	606
MflI	RGATCY	1 cut(s)	570
MhlI	GDGCHC	4 cut(s)	186, 1128, 1266, 1404
MluCI	AATT	7 cut(s)	409, 584, 606, 865, 945, 1082, 1448
Mly113I	GGCGCC	1 cut(s)	1388
MlyI	GAGTC	4 cut(s)	673, 731, 934, 1150
Mph1103I	ATGCAT	1 cut(s)	633
MroI	TCCGGA	1 cut(s)	1166
MroNI	GCCGGC	2 cut(s)	151, 1384
MroXI	GAANNNNTTC	1 cut(s)	1022
MseI	TTAA	2 cut(s)	1224, 1479
MslI	CAYNNNNRTG	4 cut(s)	626, 630, 1131, 1379
MspA1I	CMGCKG	2 cut(s)	307, 779
MspR9I	CCNGG	7 cut(s)	225, 338, 401, 457, 458, 556, 900
MunI	CAATTG	1 cut(s)	606
Mva1269I	GAATGC	1 cut(s)	50
MvaI	CCWGG	2 cut(s)	556, 900
MvnI	CGCG	2 cut(s)	952, 1092
MwoI	GCNNNNNNNGC	3 cut(s)	190, 220, 958
NaeI	GCCGGC	2 cut(s)	153, 1386
NarI	GGCGCC	1 cut(s)	1388
NciI	CCSGG	5 cut(s)	225, 338, 401, 457, 458
NdeII	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
NgoMIV	GCCGGC	2 cut(s)	151, 1384
NlaIII	CATG	9 cut(s)	260, 631, 635, 897, 1136, 1261, 1270, 1346, 1378
NlaIV	GGNNCC	7 cut(s)	222, 330, 466, 502, 572, 904, 1389
NmeAIII	GCCGAG	1 cut(s)	713
NmuCI	GTSAC	1 cut(s)	1420
NsiI	ATGCAT	1 cut(s)	633
NspI	RCATGY	3 cut(s)	631, 635, 1270
NspV	TTCGAA	1 cut(s)	1009
PaeI	GCATGC	1 cut(s)	635
PaeR7I	CTCGAG	1 cut(s)	22
PauI	GCGCGC	1 cut(s)	950
PcsI	WCGNNNNNNNCGW	1 cut(s)	203
PctI	GAATGC	1 cut(s)	50
PdiI	GCCGGC	2 cut(s)	153, 1386
PdmI	GAANNNNTTC	1 cut(s)	1022
PfeI	GAWTC	1 cut(s)	87
PflFI	GACNNNGTC	1 cut(s)	358
PflMI	CCANNNNNTGG	1 cut(s)	262
PkrI	GCNGC	4 cut(s)	157, 306, 781, 928
PleI	GAGTC	4 cut(s)	673, 730, 934, 1149
PluTI	GGCGCC	1 cut(s)	1391
PmaCI	CACGTG	1 cut(s)	1333
PmlI	CACGTG	1 cut(s)	1333
PpsI	GAGTC	4 cut(s)	673, 730, 934, 1149
Ppu21I	YACGTR	1 cut(s)	1333
PshAI	GACNNNNGTC	1 cut(s)	1278
Psp6I	CCWGG	2 cut(s)	554, 898
PspCI	CACGTG	1 cut(s)	1333
PspGI	CCWGG	2 cut(s)	554, 898
PspN4I	GGNNCC	7 cut(s)	222, 330, 466, 502, 572, 904, 1389
PspXI	VCTCGAGB	1 cut(s)	22
PstNI	CAGNNNCTG	1 cut(s)	555
PsuI	RGATCY	1 cut(s)	570
PsyI	GACNNNGTC	1 cut(s)	358
PteI	GCGCGC	1 cut(s)	950
PvuII	CAGCTG	2 cut(s)	307, 779
RsaI	GTAC	3 cut(s)	553, 1031, 1068
RsaNI	GTAC	3 cut(s)	552, 1030, 1067
RseI	CAYNNNNRTG	4 cut(s)	626, 630, 1131, 1379
SalI	GTCGAC	1 cut(s)	716
SaqAI	TTAA	2 cut(s)	1224, 1479
SatI	GCNGC	4 cut(s)	156, 305, 780, 927
Sau3AI	GATC	6 cut(s)	544, 570, 751, 873, 916, 1371
SchI	GAGTC	4 cut(s)	673, 731, 934, 1150
ScrFI	CCNGG	7 cut(s)	225, 338, 401, 457, 458, 556, 900
SduI	GDGCHC	4 cut(s)	186, 1128, 1266, 1404
SexAI	ACCWGGT	1 cut(s)	554
SfaNI	GCATC	3 cut(s)	421, 815, 1371
SfoI	GGCGCC	1 cut(s)	1389
Sfr274I	CTCGAG	1 cut(s)	22
SfuI	TTCGAA	1 cut(s)	1009
SgrDI	CGTCGACG	1 cut(s)	716
SinI	GGWCC	6 cut(s)	253, 328, 465, 501, 1164, 1273
SlaI	CTCGAG	1 cut(s)	22
SmaI	CCCGGG	1 cut(s)	458
SmiMI	CAYNNNNRTG	4 cut(s)	626, 630, 1131, 1379
SmlI	CTYRAG	1 cut(s)	22
SmoI	CTYRAG	1 cut(s)	22
SphI	GCATGC	1 cut(s)	635
Sse9I	AATT	7 cut(s)	409, 584, 606, 865, 945, 1082, 1448
SsiI	CCGC	8 cut(s)	155, 332, 371, 434, 685, 707, 1129, 1398
SspDI	GGCGCC	1 cut(s)	1387
StyD4I	CCNGG	7 cut(s)	223, 336, 399, 455, 456, 554, 898
TaaI	ACNGT	5 cut(s)	199, 275, 551, 1280, 1414
TaiI	ACGT	5 cut(s)	60, 242, 285, 1113, 1335
TaqI	TCGA	8 cut(s)	15, 23, 52, 206, 717, 1009, 1139, 1472
TasI	AATT	7 cut(s)	409, 584, 606, 865, 945, 1082, 1448
TauI	GCSGC	1 cut(s)	158
TfiI	GAWTC	1 cut(s)	87
Tru1I	TTAA	2 cut(s)	1224, 1479
Tru9I	TTAA	2 cut(s)	1224, 1479
TscAI	CASTG	2 cut(s)	255, 1283
TseFI	GTSAC	1 cut(s)	1420
TseI	GCWGC	3 cut(s)	304, 779, 926
Tsp45I	GTSAC	1 cut(s)	1420
TspDTI	ATGAA	2 cut(s)	597, 804
TspGWI	ACGGA	2 cut(s)	108, 790
TspMI	CCCGGG	1 cut(s)	456
TspRI	CASTG	2 cut(s)	255, 1283
Tth111I	GACNNNGTC	1 cut(s)	358
Van91I	CCANNNNNTGG	1 cut(s)	262
VneI	GTGCAC	2 cut(s)	182, 1124
VpaK11BI	GGWCC	6 cut(s)	253, 328, 465, 501, 1164, 1273
XapI	RAATTY	1 cut(s)	584
XceI	RCATGY	3 cut(s)	631, 635, 1270
XhoI	CTCGAG	1 cut(s)	22
XmaI	CCCGGG	1 cut(s)	456
XmiI	GTMKAC	1 cut(s)	717
XmnI	GAANNNNTTC	1 cut(s)	1022
Zsp2I	ATGCAT	1 cut(s)	633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.