Prupe.7G031300_v2.0.a1

Belongs to the short-chain dehydrogenases reductases (SDR) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
5823894 .. 5827820
3927 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G031300.2

Sequence Viewer

Length: 882 bp
ATGGCGAACCAAGTCGCGGACCACCTCGAGCCATGGCGCCACCTCCACGGCAAGGTCGTCATGGTCACCGGCGCTTCGTCTGGCCTCGGCCGCGAGTTATGCTTGGACTTGGCTAAAGCTGGATGCAGGATCGTCGCCGCGGCTCGCCGCATCGACCGCCTTCAATCCGTCTGTGATGAAATCAACCAGCTCCCCGTCACCGCGCCTTCTTCATCTTCTTCATCTTCTTCTGTGAATGGGCCTGGAAGCTCCAGGGCCGTGGCCGTGGAGCTCGATATCAGCGCCGACGGGCCAGCTATTGAGAAGTCTGTAAACAAGGCTTGGGACGCGTTTGGGCGCATCGACGCCCTCGTTAACAATGCCGGTGTTAGAGGTAATGTGAGTTCCTCGCTCGAATTGTCTGAGGAGGAATGGAATAATGTATTCAAGACAAATTTGACAGGGTCCTGGTTGGTGTCAAAATATGTTTCTATACGCATGCGCGACGCTGATCAGGGAGGATCAATCATCAACGTATCTTCCATTGCAGGTCTTCATCGTGGATATTTGCCTGGAGGTGTAGCATACAATTGTTCAAAGGCTGGTGTAAACACCTTGGCAAAGGTTATGGCTATGGAATTGGGAGTACACAAAATCAGAGTGAATGCAATATCGCCGGGACTTTTCAGATCTGAAATCACGGAGGGTCTTATGAAAAAAGACTGGCTACACAATGTGGCTATGAAAACTGTCCCCTTAAGAACATTTGGCACTTCGGATCCAGCATTGACATCACTAGTTCGTTATTTAGTACACGACTCTTCTGAATATGTTTCAGGCAATGTCTACATTGTTGATGCAGGAGCCACCTTGCCAGGTGTCCCTATTTTCTCGGCCCTTTGA

Protein Analysis

294

Amino Acids

31.13

Weight (kDa)

7.72

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 518
AccB1I GGYRCC 1 cut(s) 36
AccI GTMKAC 1 cut(s) 825
AccII CGCG 6 cut(s) 17, 93, 140, 203, 329, 483
AciI CCGC 7 cut(s) 17, 91, 138, 140, 148, 157, 201
AclWI GGATC 4 cut(s) 137, 508, 752, 765
AcoI YGGCCR 2 cut(s) 88, 261
AcsI RAATTY 1 cut(s) 433
AcyI GRCGYC 2 cut(s) 37, 345
AdeI CACNNNGTG 1 cut(s) 715
AfaI GTAC 2 cut(s) 627, 792
AfiI CCNNNNNNNGG 2 cut(s) 16, 52
AflII CTTAAG 1 cut(s) 736
AflIII ACRYGT 1 cut(s) 327
AgsI TTSAA 3 cut(s) 164, 427, 576
AhlI ACTAGT 1 cut(s) 775
AjnI CCWGG 5 cut(s) 241, 251, 446, 550, 853
AluBI AGCT 5 cut(s) 119, 190, 249, 271, 296
AluI AGCT 5 cut(s) 119, 190, 249, 271, 296
Alw21I GWGCWC 1 cut(s) 273
AlwI GGATC 4 cut(s) 137, 508, 752, 765
Ama87I CYCGRG 1 cut(s) 26
AoxI GGCC 7 cut(s) 82, 88, 239, 255, 261, 290, 873
ApoI RAATTY 1 cut(s) 433
AspLEI GCGC 6 cut(s) 39, 74, 205, 284, 339, 483
AspS9I GGNCC 6 cut(s) 19, 239, 255, 290, 444, 874
AsuC2I CCSGG 1 cut(s) 657
AsuHPI GGTGA 2 cut(s) 58, 190
AvaI CYCGRG 1 cut(s) 26
AvaII GGWCC 2 cut(s) 19, 444
BamHI GGATCC 1 cut(s) 757
BanI GGYRCC 1 cut(s) 36
BanII GRGCYC 1 cut(s) 273
BbsI GAAGAC 1 cut(s) 524
Bbv12I GWGCWC 1 cut(s) 273
BceAI ACGGC 3 cut(s) 64, 242, 248
BcgI CGANNNNNNTGC 2 cut(s) 115, 149
BciT130I CCWGG 5 cut(s) 243, 253, 448, 552, 855
BclI TGATCA 1 cut(s) 490
BcnI CCSGG 1 cut(s) 657
BcuI ACTAGT 1 cut(s) 775
BfaI CTAG 1 cut(s) 776
BfoI RGCGCY 3 cut(s) 40, 75, 285
BfrI CTTAAG 1 cut(s) 736
BfuAI ACCTGC 1 cut(s) 518
BglII AGATCT 1 cut(s) 668
BisI GCNGC 4 cut(s) 91, 138, 141, 148
BlsI GCNGC 4 cut(s) 92, 139, 142, 149
Bme1390I CCNGG 6 cut(s) 243, 253, 448, 552, 657, 855
Bme18I GGWCC 2 cut(s) 19, 444
BmeT110I CYCGRG 1 cut(s) 26
BmgT120I GGNCC 6 cut(s) 19, 239, 255, 290, 444, 874
BmiI GGNNCC 4 cut(s) 38, 445, 759, 844
BmrFI CCNGG 6 cut(s) 243, 253, 448, 552, 657, 855
BmsI GCATC 4 cut(s) 113, 159, 348, 826
BpiI GAAGAC 1 cut(s) 524
BpmI CTGGAG 2 cut(s) 235, 573
BpuMI CCSGG 1 cut(s) 657
BsaHI GRCGYC 2 cut(s) 37, 345
BsaJI CCNNGG 8 cut(s) 32, 46, 85, 138, 252, 258, 264, 594
Bsc4I CCNNNNNNNGG 2 cut(s) 16, 52
Bse118I RCCGGY 2 cut(s) 68, 362
Bse1I ACTGG 1 cut(s) 707
Bse3DI GCAATG 2 cut(s) 522, 826
BseBI CCWGG 5 cut(s) 243, 253, 448, 552, 855
BseDI CCNNGG 8 cut(s) 32, 46, 85, 138, 252, 258, 264, 594
BseGI GGATG 1 cut(s) 128
BseLI CCNNNNNNNGG 2 cut(s) 16, 52
BseMI GCAATG 2 cut(s) 522, 826
BseMII CTCAG 1 cut(s) 393
BseNI ACTGG 1 cut(s) 707
BseRI GAGGAG 1 cut(s) 419
BseX3I CGGCCG 1 cut(s) 88
Bsh1236I CGCG 6 cut(s) 17, 93, 140, 203, 329, 483
Bsh1285I CGRYCG 2 cut(s) 91, 157
BshFI GGCC 7 cut(s) 84, 90, 241, 257, 263, 292, 875
BshNI GGYRCC 1 cut(s) 36
BsiEI CGRYCG 2 cut(s) 91, 157
BsiHKAI GWGCWC 1 cut(s) 273
BsiHKCI CYCGRG 1 cut(s) 26
BsiSI CCGG 3 cut(s) 69, 363, 656
BslFI GGGAC 4 cut(s) 338, 672, 716, 845
BslI CCNNNNNNNGG 2 cut(s) 16, 52
BsmFI GGGAC 4 cut(s) 338, 672, 716, 845
BsmI GAATGC 1 cut(s) 649
BsnI GGCC 7 cut(s) 84, 90, 241, 257, 263, 292, 875
BsoBI CYCGRG 1 cut(s) 26
Bsp1286I GDGCHC 1 cut(s) 273
Bsp143I GATC 5 cut(s) 129, 490, 500, 668, 757
Bsp19I CCATGG 1 cut(s) 32
BspACI CCGC 7 cut(s) 17, 91, 138, 140, 148, 157, 201
BspANI GGCC 7 cut(s) 84, 90, 241, 257, 263, 292, 875
BspCNI CTCAG 1 cut(s) 394
BspFNI CGCG 6 cut(s) 17, 93, 140, 203, 329, 483
BspLI GGNNCC 4 cut(s) 38, 445, 759, 844
BspMI ACCTGC 1 cut(s) 518
BspPI GGATC 4 cut(s) 137, 508, 752, 765
BspT107I GGYRCC 1 cut(s) 36
BspTI CTTAAG 1 cut(s) 736
BsrDI GCAATG 2 cut(s) 522, 826
BsrFI RCCGGY 2 cut(s) 68, 362
BsrI ACTGG 1 cut(s) 707
BssAI RCCGGY 2 cut(s) 68, 362
BssECI CCNNGG 8 cut(s) 32, 46, 85, 138, 252, 258, 264, 594
BssMI GATC 5 cut(s) 129, 490, 500, 668, 757
BssNI GRCGYC 2 cut(s) 37, 345
BssT1I CCWWGG 2 cut(s) 32, 594
Bst2UI CCWGG 5 cut(s) 243, 253, 448, 552, 855
Bst4CI ACNGT 1 cut(s) 730
Bst6I CTCTTC 1 cut(s) 805
BstACI GRCGYC 2 cut(s) 37, 345
BstAFI CTTAAG 1 cut(s) 736
BstC8I GCNNGC 3 cut(s) 145, 294, 479
BstDEI CTNAG 1 cut(s) 402
BstDSI CCRYGG 5 cut(s) 32, 46, 138, 258, 264
BstEII GGTNACC 1 cut(s) 64
BstF5I GGATG 1 cut(s) 128
BstFNI CGCG 6 cut(s) 17, 93, 140, 203, 329, 483
BstH2I RGCGCY 3 cut(s) 40, 75, 285
BstHHI GCGC 6 cut(s) 39, 74, 205, 284, 339, 483
BstKTI GATC 5 cut(s) 132, 493, 503, 671, 760
BstMBI GATC 5 cut(s) 129, 490, 500, 668, 757
BstMCI CGRYCG 2 cut(s) 91, 157
BstMWI GCNNNNNNNGC 4 cut(s) 90, 99, 156, 326
BstNI CCWGG 5 cut(s) 243, 253, 448, 552, 855
BstNSI RCATGY 1 cut(s) 481
BstPI GGTNACC 1 cut(s) 64
BstSCI CCNGG 6 cut(s) 241, 251, 446, 550, 655, 853
BstUI CGCG 6 cut(s) 17, 93, 140, 203, 329, 483
BstV2I GAAGAC 1 cut(s) 524
BstX2I RGATCY 2 cut(s) 668, 757
BstXI CCANNNNNNTGG 1 cut(s) 259
BstYI RGATCY 2 cut(s) 668, 757
BstZI CGGCCG 1 cut(s) 88
BsuRI GGCC 7 cut(s) 84, 90, 241, 257, 263, 292, 875
BtgI CCRYGG 5 cut(s) 32, 46, 138, 258, 264
BtsCI GGATG 1 cut(s) 128
BveI ACCTGC 1 cut(s) 518
Cac8I GCNNGC 3 cut(s) 145, 294, 479
CfoI GCGC 6 cut(s) 39, 74, 205, 284, 339, 483
Cfr10I RCCGGY 2 cut(s) 68, 362
Cfr13I GGNCC 6 cut(s) 19, 239, 255, 290, 444, 874
Cfr42I CCGCGG 1 cut(s) 141
CseI GACGC 3 cut(s) 335, 353, 494
Csp6I GTAC 2 cut(s) 626, 791
CviAII CATG 3 cut(s) 33, 61, 478
CviQI GTAC 2 cut(s) 626, 791
DdeI CTNAG 1 cut(s) 402
DinI GGCGCC 1 cut(s) 38
DpnI GATC 5 cut(s) 131, 492, 502, 670, 759
DpnII GATC 5 cut(s) 129, 490, 500, 668, 757
DraIII CACNNNGTG 1 cut(s) 715
EaeI YGGCCR 2 cut(s) 88, 261
EagI CGGCCG 1 cut(s) 88
Eam1104I CTCTTC 1 cut(s) 805
EarI CTCTTC 1 cut(s) 805
Ecl136II GAGCTC 1 cut(s) 271
EclXI CGGCCG 1 cut(s) 88
Eco130I CCWWGG 2 cut(s) 32, 594
Eco24I GRGCYC 1 cut(s) 273
Eco32I GATATC 1 cut(s) 277
Eco47I GGWCC 2 cut(s) 19, 444
Eco52I CGGCCG 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 271
Eco88I CYCGRG 1 cut(s) 26
Eco91I GGTNACC 1 cut(s) 64
EcoICRI GAGCTC 1 cut(s) 271
EcoO109I RGGNCCY 1 cut(s) 444
EcoO65I GGTNACC 1 cut(s) 64
EcoRII CCWGG 5 cut(s) 241, 251, 446, 550, 853
EcoRV GATATC 1 cut(s) 277
EcoT14I CCWWGG 2 cut(s) 32, 594
EcoT38I GRGCYC 1 cut(s) 273
EgeI GGCGCC 1 cut(s) 38
EheI GGCGCC 1 cut(s) 38
ErhI CCWWGG 2 cut(s) 32, 594
FaeI CATG 3 cut(s) 36, 64, 481
FaqI GGGAC 4 cut(s) 338, 672, 716, 845
FatI CATG 3 cut(s) 32, 60, 477
FbaI TGATCA 1 cut(s) 490
FblI GTMKAC 1 cut(s) 825
Fnu4HI GCNGC 4 cut(s) 91, 138, 141, 148
FokI GGATG 1 cut(s) 135
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 4 cut(s) 91, 138, 141, 148
FspBI CTAG 1 cut(s) 776
GlaI GCGC 6 cut(s) 38, 73, 204, 283, 338, 482
GluI GCNGC 4 cut(s) 91, 138, 141, 148
GsuI CTGGAG 2 cut(s) 235, 573
HaeII RGCGCY 3 cut(s) 40, 75, 285
HaeIII GGCC 7 cut(s) 84, 90, 241, 257, 263, 292, 875
HapII CCGG 3 cut(s) 69, 363, 656
HgaI GACGC 3 cut(s) 335, 353, 494
HhaI GCGC 6 cut(s) 39, 74, 205, 284, 339, 483
Hin1I GRCGYC 2 cut(s) 37, 345
Hin1II CATG 3 cut(s) 36, 64, 481
Hin6I GCGC 6 cut(s) 37, 72, 203, 282, 337, 481
HinP1I GCGC 6 cut(s) 37, 72, 203, 282, 337, 481
HincII GTYRAC 1 cut(s) 355
HindII GTYRAC 1 cut(s) 355
HinfI GANTC 1 cut(s) 797
HpaI GTTAAC 1 cut(s) 355
HpaII CCGG 3 cut(s) 69, 363, 656
HphI GGTGA 2 cut(s) 58, 190
Hpy166II GTNNAC 6 cut(s) 313, 355, 589, 628, 793, 826
Hpy188I TCNGA 6 cut(s) 403, 638, 668, 673, 757, 805
Hpy188III TCNNGA 1 cut(s) 427
Hpy8I GTNNAC 6 cut(s) 313, 355, 589, 628, 793, 826
Hpy99I CGWCG 4 cut(s) 137, 290, 347, 488
HpyAV CCTTC 2 cut(s) 170, 216
HpyCH4III ACNGT 1 cut(s) 730
HpyCH4IV ACGT 1 cut(s) 513
HpyCH4V TGCA 4 cut(s) 126, 527, 647, 839
HpyF10VI GCNNNNNNNGC 4 cut(s) 90, 99, 156, 326
HpyF3I CTNAG 1 cut(s) 402
HpySE526I ACGT 1 cut(s) 513
Hsp92I GRCGYC 2 cut(s) 37, 345
Hsp92II CATG 3 cut(s) 36, 64, 481
HspAI GCGC 6 cut(s) 37, 72, 203, 282, 337, 481
KasI GGCGCC 1 cut(s) 36
Ksp22I TGATCA 1 cut(s) 490
KspAI GTTAAC 1 cut(s) 355
KspI CCGCGG 1 cut(s) 141
Kzo9I GATC 5 cut(s) 129, 490, 500, 668, 757
LmnI GCTCC 4 cut(s) 195, 254, 268, 842
LweI GCATC 4 cut(s) 113, 159, 348, 826
MaeI CTAG 1 cut(s) 776
MaeII ACGT 1 cut(s) 513
MaeIII GTNAC 2 cut(s) 64, 196
MalI GATC 5 cut(s) 131, 492, 502, 670, 759
MboI GATC 5 cut(s) 129, 490, 500, 668, 757
MboII GAAGA 8 cut(s) 201, 207, 210, 216, 219, 510, 524, 792
MfeI CAATTG 1 cut(s) 568
MflI RGATCY 2 cut(s) 668, 757
MhlI GDGCHC 1 cut(s) 273
MluCI AATT 4 cut(s) 395, 433, 568, 617
MluI ACGCGT 1 cut(s) 327
Mly113I GGCGCC 1 cut(s) 37
MlyI GAGTC 1 cut(s) 791
MseI TTAA 2 cut(s) 354, 737
MspA1I CMGCKG 1 cut(s) 140
MspCI CTTAAG 1 cut(s) 736
MspI CCGG 3 cut(s) 69, 363, 656
MspR9I CCNGG 6 cut(s) 243, 253, 448, 552, 657, 855
MunI CAATTG 1 cut(s) 568
Mva1269I GAATGC 1 cut(s) 649
MvaI CCWGG 5 cut(s) 243, 253, 448, 552, 855
MvnI CGCG 6 cut(s) 17, 93, 140, 203, 329, 483
MwoI GCNNNNNNNGC 4 cut(s) 90, 99, 156, 326
NarI GGCGCC 1 cut(s) 37
NciI CCSGG 1 cut(s) 657
NcoI CCATGG 1 cut(s) 32
NdeII GATC 5 cut(s) 129, 490, 500, 668, 757
NlaIII CATG 3 cut(s) 36, 64, 481
NlaIV GGNNCC 4 cut(s) 38, 445, 759, 844
NmeAIII GCCGAG 2 cut(s) 66, 851
NmuCI GTSAC 2 cut(s) 64, 196
NspI RCATGY 1 cut(s) 481
PaeI GCATGC 1 cut(s) 481
PaeR7I CTCGAG 1 cut(s) 26
PcsI WCGNNNNNNNCGW 2 cut(s) 54, 348
PctI GAATGC 1 cut(s) 649
PflFI GACNNNGTC 1 cut(s) 442
PkrI GCNGC 4 cut(s) 92, 139, 142, 149
PleI GAGTC 1 cut(s) 791
PluTI GGCGCC 1 cut(s) 40
PpsI GAGTC 1 cut(s) 791
PpuMI RGGWCCY 1 cut(s) 444
Psp124BI GAGCTC 1 cut(s) 273
Psp5II RGGWCCY 1 cut(s) 444
Psp6I CCWGG 5 cut(s) 241, 251, 446, 550, 853
PspEI GGTNACC 1 cut(s) 64
PspGI CCWGG 5 cut(s) 241, 251, 446, 550, 853
PspN4I GGNNCC 4 cut(s) 38, 445, 759, 844
PspPI GGNCC 6 cut(s) 19, 239, 255, 290, 444, 874
PspPPI RGGWCCY 1 cut(s) 444
PspXI VCTCGAGB 1 cut(s) 26
PsrI GAACNNNNNNTAC 2 cut(s) 367, 399
PsuI RGATCY 2 cut(s) 668, 757
PsyI GACNNNGTC 1 cut(s) 442
RsaI GTAC 2 cut(s) 627, 792
RsaNI GTAC 2 cut(s) 626, 791
SacI GAGCTC 1 cut(s) 273
SacII CCGCGG 1 cut(s) 141
SaqAI TTAA 2 cut(s) 354, 737
SatI GCNGC 4 cut(s) 91, 138, 141, 148
Sau3AI GATC 5 cut(s) 129, 490, 500, 668, 757
Sau96I GGNCC 6 cut(s) 19, 239, 255, 290, 444, 874
SchI GAGTC 1 cut(s) 791
ScrFI CCNGG 6 cut(s) 243, 253, 448, 552, 657, 855
SduI GDGCHC 1 cut(s) 273
SfaNI GCATC 4 cut(s) 113, 159, 348, 826
SfoI GGCGCC 1 cut(s) 38
Sfr274I CTCGAG 1 cut(s) 26
Sfr303I CCGCGG 1 cut(s) 141
SgrAI CRCCGGYG 1 cut(s) 68
SgrBI CCGCGG 1 cut(s) 141
SinI GGWCC 2 cut(s) 19, 444
SlaI CTCGAG 1 cut(s) 26
SmlI CTYRAG 2 cut(s) 26, 736
SmoI CTYRAG 2 cut(s) 26, 736
SpeI ACTAGT 1 cut(s) 775
SphI GCATGC 1 cut(s) 481
Sse9I AATT 4 cut(s) 395, 433, 568, 617
SsiI CCGC 7 cut(s) 17, 91, 138, 140, 148, 157, 201
SspDI GGCGCC 1 cut(s) 36
SspMI CTAG 1 cut(s) 776
SstI GAGCTC 1 cut(s) 273
StyD4I CCNGG 6 cut(s) 241, 251, 446, 550, 655, 853
StyI CCWWGG 2 cut(s) 32, 594
TaaI ACNGT 1 cut(s) 730
TaiI ACGT 1 cut(s) 516
TaqI TCGA 5 cut(s) 27, 153, 273, 342, 393
TasI AATT 4 cut(s) 395, 433, 568, 617
TatI WGTACW 2 cut(s) 625, 790
TauI GCSGC 4 cut(s) 93, 140, 143, 150
Tru1I TTAA 2 cut(s) 354, 737
Tru9I TTAA 2 cut(s) 354, 737
TseFI GTSAC 2 cut(s) 64, 196
Tsp45I GTSAC 2 cut(s) 64, 196
TspDTI ATGAA 6 cut(s) 192, 201, 210, 524, 707, 737
TspGWI ACGGA 2 cut(s) 157, 695
Tth111I GACNNNGTC 1 cut(s) 442
Vha464I CTTAAG 1 cut(s) 736
VpaK11BI GGWCC 2 cut(s) 19, 444
XapI RAATTY 1 cut(s) 433
XceI RCATGY 1 cut(s) 481
XhoI CTCGAG 1 cut(s) 26
XmiI GTMKAC 1 cut(s) 825
XspI CTAG 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.