SH3 domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G07360 AT2G07360 |
| fragaria_vesca | FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 |
| malus_domestica | MD04G1002300.v1.1 MD07G1055200.v1.1 MD15G1427900.v1.1 |
| prunus_persica | Prupe.7G042600_v2.0.a1 Prupe.7G042600_v2.0.a1 |
| pyrus_communis | pycom04g00260 |
| rosa_chinensis | RchiOBHm_Chr4g0384831 RchiOBHm_Chr4g0384941 |
| rosa_laevigata | RLG00000010266 |
| rosa_multiflora | Rmu_sc0003822.1_g000020 Rmu_sc0003822.1_g000021 |
| rosa_roxburghii | Rroxscaffold_5G00332880 |
| rosa_rugosa | Rorug03G0298100 Rorug03G0298200 Rorug03G0298300 |
| rosa_samantha | Rh4AG001900 Rh4BG001700 Rh4CG001400 Rh4CG002100 Rh4DG001500 |
| rosa_wichuraiana | Rw4G000720 Rw4G000730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3232 |
| AatII | GACGTC | 1 cut(s) | 86 |
| Acc36I | ACCTGC | 1 cut(s) | 3232 |
| AccB1I | GGYRCC | 1 cut(s) | 2891 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1985 |
| AccI | GTMKAC | 1 cut(s) | 98 |
| AccII | CGCG | 1 cut(s) | 2246 |
| AcoI | YGGCCR | 3 cut(s) | 528, 1745, 3113 |
| AcsI | RAATTY | 8 cut(s) | 534, 701, 975, 1017, 2342, 2736, 2879, 3376 |
| AcuI | CTGAAG | 3 cut(s) | 714, 2793, 2928 |
| AcyI | GRCGYC | 2 cut(s) | 83, 95 |
| AdeI | CACNNNGTG | 1 cut(s) | 560 |
| AfaI | GTAC | 9 cut(s) | 270, 434, 651, 782, 1365, 1504, 2067, 2149, 3410 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1810, 1985, 3155, 3263, 3329, 3454 |
| AflII | CTTAAG | 1 cut(s) | 2558 |
| AflIII | ACRYGT | 1 cut(s) | 1901 |
| AgeI | ACCGGT | 1 cut(s) | 2705 |
| AgsI | TTSAA | 8 cut(s) | 971, 1192, 1762, 1829, 3056, 3242, 3287, 3401 |
| AjiI | CACGTC | 1 cut(s) | 412 |
| AjnI | CCWGG | 8 cut(s) | 937, 1215, 1835, 1858, 1984, 2123, 2143, 3448 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 777, 809 |
| AleI | CACNNNNGTG | 1 cut(s) | 3078 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2890, 2922 |
| Alw21I | GWGCWC | 5 cut(s) | 556, 569, 1153, 2224, 2491 |
| Alw26I | GTCTC | 5 cut(s) | 916, 1469, 1910, 2382, 2978 |
| Alw44I | GTGCAC | 2 cut(s) | 552, 2220 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 548, 2771 |
| ApaLI | GTGCAC | 2 cut(s) | 552, 2220 |
| ApoI | RAATTY | 8 cut(s) | 534, 701, 975, 1017, 2342, 2736, 2879, 3376 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 73, 105 |
| AsiGI | ACCGGT | 1 cut(s) | 2705 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1537, 1540 |
| AspLEI | GCGC | 4 cut(s) | 214, 1666, 2246, 2657 |
| AspS9I | GGNCC | 7 cut(s) | 46, 821, 1919, 1999, 2645, 3161, 3478 |
| AsuHPI | GGTGA | 5 cut(s) | 643, 2327, 2840, 3213, 3401 |
| AvaII | GGWCC | 4 cut(s) | 46, 1919, 3161, 3478 |
| AxyI | CCTNAGG | 2 cut(s) | 881, 1066 |
| BaeGI | GKGCMC | 2 cut(s) | 556, 2224 |
| BalI | TGGCCA | 2 cut(s) | 530, 1747 |
| BamHI | GGATCC | 4 cut(s) | 579, 934, 1219, 3272 |
| BanI | GGYRCC | 1 cut(s) | 2891 |
| BauI | CACGAG | 1 cut(s) | 1152 |
| BbsI | GAAGAC | 6 cut(s) | 81, 108, 152, 721, 1904, 3399 |
| Bbv12I | GWGCWC | 5 cut(s) | 556, 569, 1153, 2224, 2491 |
| BceAI | ACGGC | 6 cut(s) | 57, 183, 2699, 3128, 3351, 3369 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 347, 381 |
| BciT130I | CCWGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| BciVI | GTATCC | 2 cut(s) | 1538, 1564 |
| BclI | TGATCA | 2 cut(s) | 1699, 2502 |
| BcoDI | GTCTC | 5 cut(s) | 916, 1469, 1910, 2382, 2978 |
| BfmI | CTRYAG | 1 cut(s) | 2330 |
| BfoI | RGCGCY | 1 cut(s) | 1667 |
| BfrI | CTTAAG | 1 cut(s) | 2558 |
| BfuAI | ACCTGC | 1 cut(s) | 3232 |
| BfuI | GTATCC | 2 cut(s) | 1538, 1564 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1070, 2644 |
| BglII | AGATCT | 1 cut(s) | 2334 |
| BmcAI | AGTACT | 2 cut(s) | 1365, 1504 |
| Bme1390I | CCNGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| Bme18I | GGWCC | 4 cut(s) | 46, 1919, 3161, 3478 |
| BmgBI | CACGTC | 1 cut(s) | 412 |
| BmgT120I | GGNCC | 7 cut(s) | 46, 821, 1919, 1999, 2645, 3161, 3478 |
| BmrFI | CCNGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| BmrI | ACTGGG | 2 cut(s) | 604, 3476 |
| BmuI | ACTGGG | 2 cut(s) | 604, 3476 |
| BpiI | GAAGAC | 6 cut(s) | 81, 108, 152, 721, 1904, 3399 |
| BpmI | CTGGAG | 2 cut(s) | 1575, 3147 |
| BpuEI | CTTGAG | 2 cut(s) | 2268, 3276 |
| BsaBI | GATNNNNATC | 3 cut(s) | 221, 2669, 3241 |
| BsaHI | GRCGYC | 2 cut(s) | 83, 95 |
| BsaJI | CCNNGG | 9 cut(s) | 1011, 1158, 1859, 1985, 2124, 2437, 2824, 3448, 3449 |
| BsaWI | WCCGGW | 2 cut(s) | 152, 2705 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 730, 760, 1840, 1870, 2890, 2920 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1810, 1985, 3155, 3263, 3329, 3454 |
| Bse118I | RCCGGY | 3 cut(s) | 106, 2705, 2857 |
| Bse1I | ACTGG | 7 cut(s) | 553, 574, 599, 1361, 1558, 2737, 3482 |
| Bse21I | CCTNAGG | 2 cut(s) | 881, 1066 |
| Bse3DI | GCAATG | 5 cut(s) | 1065, 1656, 1778, 2051, 2868 |
| Bse8I | GATNNNNATC | 3 cut(s) | 221, 2669, 3241 |
| BseBI | CCWGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| BseDI | CCNNGG | 9 cut(s) | 1011, 1158, 1859, 1985, 2124, 2437, 2824, 3448, 3449 |
| BseJI | GATNNNNATC | 3 cut(s) | 221, 2669, 3241 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1810, 1985, 3155, 3263, 3329, 3454 |
| BseMI | GCAATG | 5 cut(s) | 1065, 1656, 1778, 2051, 2868 |
| BseNI | ACTGG | 7 cut(s) | 553, 574, 599, 1361, 1558, 2737, 3482 |
| BseRI | GAGGAG | 4 cut(s) | 361, 934, 1202, 3014 |
| BseSI | GKGCMC | 2 cut(s) | 556, 2224 |
| BseX3I | CGGCCG | 1 cut(s) | 3113 |
| BseYI | CCCAGC | 4 cut(s) | 1223, 2259, 3263, 3470 |
| BsgI | GTGCAG | 2 cut(s) | 1298, 2393 |
| Bsh1236I | CGCG | 1 cut(s) | 2246 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3116 |
| BshNI | GGYRCC | 1 cut(s) | 2891 |
| BshTI | ACCGGT | 1 cut(s) | 2705 |
| BsiEI | CGRYCG | 1 cut(s) | 3116 |
| BsiHKAI | GWGCWC | 5 cut(s) | 556, 569, 1153, 2224, 2491 |
| BsiSI | CCGG | 7 cut(s) | 107, 153, 186, 2706, 2858, 2895, 3116 |
| BsiWI | CGTACG | 1 cut(s) | 268 |
| BslFI | GGGAC | 7 cut(s) | 31, 865, 1668, 2603, 3037, 3147, 3464 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1810, 1985, 3155, 3263, 3329, 3454 |
| BsmAI | GTCTC | 5 cut(s) | 916, 1469, 1910, 2382, 2978 |
| BsmFI | GGGAC | 7 cut(s) | 31, 865, 1668, 2603, 3037, 3147, 3464 |
| BsmI | GAATGC | 2 cut(s) | 798, 2101 |
| Bsp1286I | GDGCHC | 5 cut(s) | 556, 569, 1153, 2224, 2491 |
| Bsp1407I | TGTACA | 1 cut(s) | 432 |
| BspFNI | CGCG | 1 cut(s) | 2246 |
| BspHI | TCATGA | 1 cut(s) | 2578 |
| BspMI | ACCTGC | 1 cut(s) | 3232 |
| BspQI | GCTCTTC | 1 cut(s) | 3195 |
| BspT107I | GGYRCC | 1 cut(s) | 2891 |
| BspTI | CTTAAG | 1 cut(s) | 2558 |
| BsrDI | GCAATG | 5 cut(s) | 1065, 1656, 1778, 2051, 2868 |
| BsrFI | RCCGGY | 3 cut(s) | 106, 2705, 2857 |
| BsrGI | TGTACA | 1 cut(s) | 432 |
| BsrI | ACTGG | 7 cut(s) | 553, 574, 599, 1361, 1558, 2737, 3482 |
| BssAI | RCCGGY | 3 cut(s) | 106, 2705, 2857 |
| BssECI | CCNNGG | 9 cut(s) | 1011, 1158, 1859, 1985, 2124, 2437, 2824, 3448, 3449 |
| BssNI | GRCGYC | 2 cut(s) | 83, 95 |
| BssSI | CACGAG | 1 cut(s) | 1152 |
| BssT1I | CCWWGG | 4 cut(s) | 1011, 1158, 2437, 2824 |
| Bst2BI | CACGAG | 1 cut(s) | 1152 |
| Bst2UI | CCWGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| Bst4CI | ACNGT | 4 cut(s) | 1453, 1621, 1893, 2586 |
| Bst6I | CTCTTC | 4 cut(s) | 197, 1827, 2769, 3195 |
| BstACI | GRCGYC | 2 cut(s) | 83, 95 |
| BstAFI | CTTAAG | 1 cut(s) | 2558 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 341, 689, 2105 |
| BstAUI | TGTACA | 1 cut(s) | 432 |
| BstC8I | GCNNGC | 8 cut(s) | 108, 183, 426, 723, 1008, 1749, 1785, 2194 |
| BstEII | GGTNACC | 1 cut(s) | 1951 |
| BstFNI | CGCG | 1 cut(s) | 2246 |
| BstH2I | RGCGCY | 1 cut(s) | 1667 |
| BstHHI | GCGC | 4 cut(s) | 214, 1666, 2246, 2657 |
| BstMAI | GTCTC | 5 cut(s) | 916, 1469, 1910, 2382, 2978 |
| BstMCI | CGRYCG | 1 cut(s) | 3116 |
| BstNI | CCWGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| BstNSI | RCATGY | 5 cut(s) | 1010, 1460, 1787, 1905, 2788 |
| BstPI | GGTNACC | 1 cut(s) | 1951 |
| BstSCI | CCNGG | 8 cut(s) | 937, 1215, 1835, 1858, 1984, 2123, 2143, 3448 |
| BstSFI | CTRYAG | 1 cut(s) | 2330 |
| BstSLI | GKGCMC | 2 cut(s) | 556, 2224 |
| BstUI | CGCG | 1 cut(s) | 2246 |
| BstV2I | GAAGAC | 6 cut(s) | 81, 108, 152, 721, 1904, 3399 |
| BstX2I | RGATCY | 9 cut(s) | 31, 222, 579, 934, 1219, 1839, 2334, 3185, 3272 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3080 |
| BstYI | RGATCY | 9 cut(s) | 31, 222, 579, 934, 1219, 1839, 2334, 3185, 3272 |
| BstZI | CGGCCG | 1 cut(s) | 3113 |
| Bsu36I | CCTNAGG | 2 cut(s) | 881, 1066 |
| BsuI | GTATCC | 2 cut(s) | 1538, 1564 |
| BtrI | CACGTC | 1 cut(s) | 412 |
| BtsI | GCAGTG | 2 cut(s) | 491, 1935 |
| BtsIMutI | CAGTG | 7 cut(s) | 491, 567, 1458, 1935, 2016, 2222, 3178 |
| BveI | ACCTGC | 1 cut(s) | 3232 |
| Cac8I | GCNNGC | 8 cut(s) | 108, 183, 426, 723, 1008, 1749, 1785, 2194 |
| CaiI | CAGNNNCTG | 2 cut(s) | 548, 2771 |
| CciI | TCATGA | 1 cut(s) | 2578 |
| CfoI | GCGC | 4 cut(s) | 214, 1666, 2246, 2657 |
| Cfr10I | RCCGGY | 3 cut(s) | 106, 2705, 2857 |
| Cfr13I | GGNCC | 7 cut(s) | 46, 821, 1919, 1999, 2645, 3161, 3478 |
| CseI | GACGC | 3 cut(s) | 31, 48, 84 |
| Csp6I | GTAC | 9 cut(s) | 269, 433, 650, 781, 1364, 1503, 2066, 2148, 3409 |
| CspAI | ACCGGT | 1 cut(s) | 2705 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1874, 1909 |
| CviQI | GTAC | 9 cut(s) | 269, 433, 650, 781, 1364, 1503, 2066, 2148, 3409 |
| DraI | TTTAAA | 1 cut(s) | 729 |
| DraIII | CACNNNGTG | 1 cut(s) | 560 |
| EaeI | YGGCCR | 3 cut(s) | 528, 1745, 3113 |
| EagI | CGGCCG | 1 cut(s) | 3113 |
| Eam1104I | CTCTTC | 4 cut(s) | 197, 1827, 2769, 3195 |
| EarI | CTCTTC | 4 cut(s) | 197, 1827, 2769, 3195 |
| EciI | GGCGGA | 4 cut(s) | 20, 58, 59, 3198 |
| EclXI | CGGCCG | 1 cut(s) | 3113 |
| Eco130I | CCWWGG | 4 cut(s) | 1011, 1158, 2437, 2824 |
| Eco147I | AGGCCT | 2 cut(s) | 2436, 2941 |
| Eco47I | GGWCC | 4 cut(s) | 46, 1919, 3161, 3478 |
| Eco52I | CGGCCG | 1 cut(s) | 3113 |
| Eco57I | CTGAAG | 3 cut(s) | 714, 2793, 2928 |
| Eco81I | CCTNAGG | 2 cut(s) | 881, 1066 |
| Eco91I | GGTNACC | 1 cut(s) | 1951 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3161 |
| EcoO65I | GGTNACC | 1 cut(s) | 1951 |
| EcoRII | CCWGG | 8 cut(s) | 937, 1215, 1835, 1858, 1984, 2123, 2143, 3448 |
| EcoT14I | CCWWGG | 4 cut(s) | 1011, 1158, 2437, 2824 |
| EcoT22I | ATGCAT | 1 cut(s) | 2397 |
| ErhI | CCWWGG | 4 cut(s) | 1011, 1158, 2437, 2824 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1525, 1557 |
| FaqI | GGGAC | 7 cut(s) | 31, 865, 1668, 2603, 3037, 3147, 3464 |
| FauI | CCCGC | 1 cut(s) | 3379 |
| FauNDI | CATATG | 3 cut(s) | 331, 742, 1326 |
| FbaI | TGATCA | 2 cut(s) | 1699, 2502 |
| FblI | GTMKAC | 1 cut(s) | 98 |
| GlaI | GCGC | 4 cut(s) | 213, 1665, 2245, 2656 |
| GsaI | CCCAGC | 4 cut(s) | 1227, 2263, 3267, 3474 |
| GsuI | CTGGAG | 2 cut(s) | 1575, 3147 |
| HaeII | RGCGCY | 1 cut(s) | 1667 |
| HapII | CCGG | 7 cut(s) | 107, 153, 186, 2706, 2858, 2895, 3116 |
| HgaI | GACGC | 3 cut(s) | 31, 48, 84 |
| HhaI | GCGC | 4 cut(s) | 214, 1666, 2246, 2657 |
| Hin1I | GRCGYC | 2 cut(s) | 83, 95 |
| Hin6I | GCGC | 4 cut(s) | 212, 1664, 2244, 2655 |
| HinP1I | GCGC | 4 cut(s) | 212, 1664, 2244, 2655 |
| HincII | GTYRAC | 2 cut(s) | 99, 445 |
| HindII | GTYRAC | 2 cut(s) | 99, 445 |
| HindIII | AAGCTT | 2 cut(s) | 422, 723 |
| HpaII | CCGG | 7 cut(s) | 107, 153, 186, 2706, 2858, 2895, 3116 |
| HphI | GGTGA | 5 cut(s) | 643, 2327, 2840, 3213, 3401 |
| Hpy166II | GTNNAC | 8 cut(s) | 99, 433, 445, 554, 2014, 2222, 2318, 3110 |
| Hpy8I | GTNNAC | 8 cut(s) | 99, 433, 445, 554, 2014, 2222, 2318, 3110 |
| Hpy99I | CGWCG | 6 cut(s) | 25, 64, 85, 88, 100, 169 |
| HpyAV | CCTTC | 6 cut(s) | 459, 471, 476, 759, 2952, 3105 |
| HpyCH4III | ACNGT | 4 cut(s) | 1453, 1621, 1893, 2586 |
| HpyCH4IV | ACGT | 4 cut(s) | 83, 411, 2616, 3396 |
| HpySE526I | ACGT | 4 cut(s) | 83, 411, 2616, 3396 |
| Hsp92I | GRCGYC | 2 cut(s) | 83, 95 |
| HspAI | GCGC | 4 cut(s) | 212, 1664, 2244, 2655 |
| KflI | GGGWCCC | 1 cut(s) | 3161 |
| KroI | GCCGGC | 1 cut(s) | 106 |
| KroNI | GCCGGC | 1 cut(s) | 108 |
| Ksp22I | TGATCA | 2 cut(s) | 1699, 2502 |
| LguI | GCTCTTC | 1 cut(s) | 3195 |
| LmnI | GCTCC | 6 cut(s) | 155, 751, 1861, 1913, 2420, 2911 |
| MaeII | ACGT | 4 cut(s) | 83, 411, 2616, 3396 |
| MaeIII | GTNAC | 5 cut(s) | 631, 1816, 1951, 2612, 3219 |
| MfeI | CAATTG | 1 cut(s) | 1575 |
| MflI | RGATCY | 9 cut(s) | 31, 222, 579, 934, 1219, 1839, 2334, 3185, 3272 |
| MhlI | GDGCHC | 5 cut(s) | 556, 569, 1153, 2224, 2491 |
| MlsI | TGGCCA | 2 cut(s) | 530, 1747 |
| MluNI | TGGCCA | 2 cut(s) | 530, 1747 |
| MlyI | GAGTC | 7 cut(s) | 2, 94, 1122, 1242, 1471, 2786, 2968 |
| MmeI | TCCRAC | 5 cut(s) | 188, 604, 912, 1311, 1891 |
| Mox20I | TGGCCA | 2 cut(s) | 530, 1747 |
| Mph1103I | ATGCAT | 1 cut(s) | 2397 |
| MroNI | GCCGGC | 1 cut(s) | 106 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1537, 1540 |
| MscI | TGGCCA | 2 cut(s) | 530, 1747 |
| MseI | TTAA | 8 cut(s) | 728, 1659, 1794, 2559, 2874, 3374, 3380, 3495 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1095, 2526, 3078 |
| Msp20I | TGGCCA | 2 cut(s) | 530, 1747 |
| MspA1I | CMGCKG | 4 cut(s) | 2259, 2723, 2771, 3386 |
| MspCI | CTTAAG | 1 cut(s) | 2558 |
| MspI | CCGG | 7 cut(s) | 107, 153, 186, 2706, 2858, 2895, 3116 |
| MspR9I | CCNGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| MunI | CAATTG | 1 cut(s) | 1575 |
| Mva1269I | GAATGC | 2 cut(s) | 798, 2101 |
| MvaI | CCWGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| MvnI | CGCG | 1 cut(s) | 2246 |
| NaeI | GCCGGC | 1 cut(s) | 108 |
| NdeI | CATATG | 3 cut(s) | 331, 742, 1326 |
| NgoMIV | GCCGGC | 1 cut(s) | 106 |
| NmuCI | GTSAC | 3 cut(s) | 631, 1816, 3219 |
| NsiI | ATGCAT | 1 cut(s) | 2397 |
| NspI | RCATGY | 5 cut(s) | 1010, 1460, 1787, 1905, 2788 |
| OliI | CACNNNNGTG | 1 cut(s) | 3078 |
| PaeI | GCATGC | 2 cut(s) | 1010, 1787 |
| PagI | TCATGA | 1 cut(s) | 2578 |
| PaqCI | CACCTGC | 1 cut(s) | 3232 |
| PasI | CCCWGGG | 1 cut(s) | 3449 |
| PceI | AGGCCT | 2 cut(s) | 2436, 2941 |
| PciI | ACATGT | 1 cut(s) | 1901 |
| PciSI | GCTCTTC | 1 cut(s) | 3195 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 17, 92, 1488, 3402 |
| PctI | GAATGC | 2 cut(s) | 798, 2101 |
| PdiI | GCCGGC | 1 cut(s) | 108 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1537, 1540 |
| PfeI | GAWTC | 9 cut(s) | 406, 1484, 1691, 1709, 2129, 2756, 3038, 3242, 3287 |
| Pfl23II | CGTACG | 1 cut(s) | 268 |
| PflFI | GACNNNGTC | 1 cut(s) | 85 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1985 |
| PfoI | TCCNGGA | 2 cut(s) | 937, 1215 |
| PinAI | ACCGGT | 1 cut(s) | 2705 |
| PleI | GAGTC | 7 cut(s) | 2, 94, 1121, 1241, 1471, 2785, 2968 |
| PpsI | GAGTC | 7 cut(s) | 2, 94, 1121, 1241, 1471, 2785, 2968 |
| PpuMI | RGGWCCY | 1 cut(s) | 3161 |
| PscI | ACATGT | 1 cut(s) | 1901 |
| Psp5II | RGGWCCY | 1 cut(s) | 3161 |
| Psp6I | CCWGG | 8 cut(s) | 937, 1215, 1835, 1858, 1984, 2123, 2143, 3448 |
| PspEI | GGTNACC | 1 cut(s) | 1951 |
| PspFI | CCCAGC | 4 cut(s) | 1223, 2259, 3263, 3470 |
| PspGI | CCWGG | 8 cut(s) | 937, 1215, 1835, 1858, 1984, 2123, 2143, 3448 |
| PspLI | CGTACG | 1 cut(s) | 268 |
| PspPI | GGNCC | 7 cut(s) | 46, 821, 1919, 1999, 2645, 3161, 3478 |
| PspPPI | RGGWCCY | 1 cut(s) | 3161 |
| PstNI | CAGNNNCTG | 2 cut(s) | 548, 2771 |
| PsuI | RGATCY | 9 cut(s) | 31, 222, 579, 934, 1219, 1839, 2334, 3185, 3272 |
| PsyI | GACNNNGTC | 1 cut(s) | 85 |
| PvuII | CAGCTG | 3 cut(s) | 2259, 2723, 2771 |
| RsaI | GTAC | 9 cut(s) | 270, 434, 651, 782, 1365, 1504, 2067, 2149, 3410 |
| RsaNI | GTAC | 9 cut(s) | 269, 433, 650, 781, 1364, 1503, 2066, 2148, 3409 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1095, 2526, 3078 |
| SalI | GTCGAC | 1 cut(s) | 97 |
| SapI | GCTCTTC | 1 cut(s) | 3195 |
| SaqAI | TTAA | 8 cut(s) | 728, 1659, 1794, 2559, 2874, 3374, 3380, 3495 |
| Sau96I | GGNCC | 7 cut(s) | 46, 821, 1919, 1999, 2645, 3161, 3478 |
| ScaI | AGTACT | 2 cut(s) | 1365, 1504 |
| SchI | GAGTC | 7 cut(s) | 2, 94, 1122, 1242, 1471, 2786, 2968 |
| ScrFI | CCNGG | 8 cut(s) | 939, 1217, 1837, 1860, 1986, 2125, 2145, 3450 |
| SduI | GDGCHC | 5 cut(s) | 556, 569, 1153, 2224, 2491 |
| SfcI | CTRYAG | 1 cut(s) | 2330 |
| SinI | GGWCC | 4 cut(s) | 46, 1919, 3161, 3478 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1095, 2526, 3078 |
| SmlI | CTYRAG | 3 cut(s) | 2283, 2558, 3291 |
| SmoI | CTYRAG | 3 cut(s) | 2283, 2558, 3291 |
| SphI | GCATGC | 2 cut(s) | 1010, 1787 |
| SseBI | AGGCCT | 2 cut(s) | 2436, 2941 |
| SspI | AATATT | 2 cut(s) | 768, 2692 |
| StuI | AGGCCT | 2 cut(s) | 2436, 2941 |
| StyD4I | CCNGG | 8 cut(s) | 937, 1215, 1835, 1858, 1984, 2123, 2143, 3448 |
| StyI | CCWWGG | 4 cut(s) | 1011, 1158, 2437, 2824 |
| TaaI | ACNGT | 4 cut(s) | 1453, 1621, 1893, 2586 |
| TaiI | ACGT | 4 cut(s) | 86, 414, 2619, 3399 |
| TaqI | TCGA | 9 cut(s) | 98, 200, 752, 1180, 1312, 1482, 1645, 2667, 3405 |
| TatI | WGTACW | 4 cut(s) | 432, 1363, 1502, 2065 |
| TauI | GCSGC | 4 cut(s) | 139, 248, 905, 3230 |
| TfiI | GAWTC | 9 cut(s) | 406, 1484, 1691, 1709, 2129, 2756, 3038, 3242, 3287 |
| Tru1I | TTAA | 8 cut(s) | 728, 1659, 1794, 2559, 2874, 3374, 3380, 3495 |
| Tru9I | TTAA | 8 cut(s) | 728, 1659, 1794, 2559, 2874, 3374, 3380, 3495 |
| TscAI | CASTG | 7 cut(s) | 491, 574, 1458, 1942, 2016, 2229, 3178 |
| TseFI | GTSAC | 3 cut(s) | 631, 1816, 3219 |
| Tsp45I | GTSAC | 3 cut(s) | 631, 1816, 3219 |
| TspGWI | ACGGA | 3 cut(s) | 918, 1334, 2586 |
| TspRI | CASTG | 7 cut(s) | 491, 574, 1458, 1942, 2016, 2229, 3178 |
| Tth111I | GACNNNGTC | 1 cut(s) | 85 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1985 |
| Vha464I | CTTAAG | 1 cut(s) | 2558 |
| VneI | GTGCAC | 2 cut(s) | 552, 2220 |
| VpaK11BI | GGWCC | 4 cut(s) | 46, 1919, 3161, 3478 |
| XapI | RAATTY | 8 cut(s) | 534, 701, 975, 1017, 2342, 2736, 2879, 3376 |
| XbaI | TCTAGA | 1 cut(s) | 1145 |
| XceI | RCATGY | 5 cut(s) | 1010, 1460, 1787, 1905, 2788 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 591 |
| XmiI | GTMKAC | 1 cut(s) | 98 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1537, 1540 |
| ZraI | GACGTC | 1 cut(s) | 84 |
| ZrmI | AGTACT | 2 cut(s) | 1365, 1504 |
| Zsp2I | ATGCAT | 1 cut(s) | 2397 |