SH3 domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G07360 AT2G07360 |
| fragaria_vesca | FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 FvH4_4g00210 |
| malus_domestica | MD04G1002300.v1.1 MD07G1055200.v1.1 MD15G1427900.v1.1 |
| prunus_persica | Prupe.7G042600_v2.0.a1 Prupe.7G042600_v2.0.a1 |
| pyrus_communis | pycom04g00260 |
| rosa_chinensis | RchiOBHm_Chr4g0384831 RchiOBHm_Chr4g0384941 |
| rosa_laevigata | RLG00000010266 |
| rosa_multiflora | Rmu_sc0003822.1_g000020 Rmu_sc0003822.1_g000021 |
| rosa_roxburghii | Rroxscaffold_5G00332880 |
| rosa_rugosa | Rorug03G0298100 Rorug03G0298200 Rorug03G0298300 |
| rosa_samantha | Rh4AG001900 Rh4BG001700 Rh4CG001400 Rh4CG002100 Rh4DG001500 |
| rosa_wichuraiana | Rw4G000720 Rw4G000730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3364 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 464 |
| AatII | GACGTC | 1 cut(s) | 86 |
| Acc16I | TGCGCA | 2 cut(s) | 348, 2377 |
| Acc36I | ACCTGC | 1 cut(s) | 3364 |
| Acc65I | GGTACC | 1 cut(s) | 1344 |
| AccB1I | GGYRCC | 2 cut(s) | 914, 1344 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2117 |
| AccI | GTMKAC | 2 cut(s) | 98, 3284 |
| AccII | CGCG | 1 cut(s) | 2815 |
| AccIII | TCCGGA | 2 cut(s) | 894, 2053 |
| AcoI | YGGCCR | 2 cut(s) | 540, 1877 |
| AcsI | RAATTY | 6 cut(s) | 546, 713, 1029, 1362, 3011, 3508 |
| AcuI | CTGAAG | 4 cut(s) | 2351, 2925, 3060, 3444 |
| AcyI | GRCGYC | 5 cut(s) | 83, 95, 212, 915, 1429 |
| AdeI | CACNNNGTG | 1 cut(s) | 572 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 2117, 2140, 3287, 3395, 3461, 3586 |
| AflII | CTTAAG | 1 cut(s) | 2690 |
| AflIII | ACRYGT | 1 cut(s) | 2484 |
| AgsI | TTSAA | 8 cut(s) | 699, 742, 765, 983, 1225, 1894, 1961, 3188 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1428 |
| AjiI | CACGTC | 1 cut(s) | 424 |
| AjnI | CCWGG | 8 cut(s) | 537, 949, 1096, 1248, 1990, 2116, 2275, 3580 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 789, 821 |
| AleI | CACNNNNGTG | 1 cut(s) | 3210 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3022, 3054 |
| Alw21I | GWGCWC | 2 cut(s) | 1186, 2623 |
| Alw26I | GTCTC | 1 cut(s) | 1604 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1097, 2023 |
| Ama87I | CYCGRG | 2 cut(s) | 1185, 3067 |
| Aor13HI | TCCGGA | 2 cut(s) | 894, 2053 |
| AoxI | GGCC | 9 cut(s) | 540, 744, 832, 1202, 1493, 1877, 2131, 2777, 3071 |
| ApaI | GGGCCC | 1 cut(s) | 2781 |
| ApoI | RAATTY | 6 cut(s) | 546, 713, 1029, 1362, 3011, 3508 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 73, 105, 197, 229 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1662 |
| Asp718I | GGTACC | 1 cut(s) | 1344 |
| AspLEI | GCGC | 7 cut(s) | 262, 349, 566, 616, 917, 1798, 2378 |
| AspS9I | GGNCC | 9 cut(s) | 46, 745, 833, 2051, 2131, 2777, 2778, 3293, 3610 |
| AsuC2I | CCSGG | 1 cut(s) | 2866 |
| AsuHPI | GGTGA | 4 cut(s) | 655, 2459, 2972, 3345 |
| AsuII | TTCGAA | 1 cut(s) | 2401 |
| AsuNHI | GCTAGC | 1 cut(s) | 616 |
| AvaI | CYCGRG | 2 cut(s) | 1185, 3067 |
| AvaII | GGWCC | 4 cut(s) | 46, 2051, 3293, 3610 |
| BaeGI | GKGCMC | 1 cut(s) | 2781 |
| BalI | TGGCCA | 2 cut(s) | 542, 1879 |
| BamHI | GGATCC | 4 cut(s) | 591, 946, 1252, 3404 |
| BanI | GGYRCC | 2 cut(s) | 914, 1344 |
| BanII | GRGCYC | 2 cut(s) | 1186, 2781 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1630, 1662 |
| BbsI | GAAGAC | 5 cut(s) | 155, 733, 940, 1427, 2036 |
| Bbv12I | GWGCWC | 2 cut(s) | 1186, 2623 |
| BceAI | ACGGC | 4 cut(s) | 57, 425, 2437, 3483 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 359, 393 |
| BciT130I | CCWGG | 8 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 3582 |
| BciVI | GTATCC | 1 cut(s) | 1696 |
| BclI | TGATCA | 2 cut(s) | 36, 1831 |
| BcnI | CCSGG | 1 cut(s) | 2866 |
| BcoDI | GTCTC | 1 cut(s) | 1604 |
| BfmI | CTRYAG | 4 cut(s) | 1509, 1560, 2462, 3285 |
| BfoI | RGCGCY | 2 cut(s) | 918, 1799 |
| BfrI | CTTAAG | 1 cut(s) | 2690 |
| BfuAI | ACCTGC | 1 cut(s) | 3364 |
| BfuI | GTATCC | 1 cut(s) | 1696 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2458, 2776 |
| BglII | AGATCT | 1 cut(s) | 1214 |
| BmcAI | AGTACT | 1 cut(s) | 1500 |
| Bme1390I | CCNGG | 9 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 2866, 3582 |
| Bme18I | GGWCC | 4 cut(s) | 46, 2051, 3293, 3610 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1428 |
| BmeT110I | CYCGRG | 2 cut(s) | 1185, 3067 |
| BmgBI | CACGTC | 1 cut(s) | 424 |
| BmgT120I | GGNCC | 9 cut(s) | 46, 745, 833, 2051, 2131, 2777, 2778, 3293, 3610 |
| BmrFI | CCNGG | 9 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 2866, 3582 |
| BmrI | ACTGGG | 2 cut(s) | 616, 1251 |
| BmtI | GCTAGC | 1 cut(s) | 620 |
| BmuI | ACTGGG | 2 cut(s) | 616, 1251 |
| BpiI | GAAGAC | 5 cut(s) | 155, 733, 940, 1427, 2036 |
| BpmI | CTGGAG | 5 cut(s) | 1119, 1707, 1920, 3149, 3279 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1078 |
| Bpu14I | TTCGAA | 1 cut(s) | 2401 |
| BpuEI | CTTGAG | 2 cut(s) | 1352, 2400 |
| BpuMI | CCSGG | 1 cut(s) | 2866 |
| BsaBI | GATNNNNATC | 2 cut(s) | 224, 2801 |
| BsaHI | GRCGYC | 5 cut(s) | 83, 95, 212, 915, 1429 |
| BsaJI | CCNNGG | 5 cut(s) | 1023, 2117, 2956, 3580, 3581 |
| BsaWI | WCCGGW | 4 cut(s) | 158, 894, 2053, 3247 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 742, 772, 3022, 3052, 3513, 3543 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 2117, 2140, 3287, 3395, 3461, 3586 |
| Bse118I | RCCGGY | 3 cut(s) | 106, 188, 2989 |
| Bse1I | ACTGG | 5 cut(s) | 586, 611, 1257, 1496, 2325 |
| Bse3DI | GCAATG | 3 cut(s) | 1077, 1788, 3000 |
| Bse8I | GATNNNNATC | 2 cut(s) | 224, 2801 |
| BseAI | TCCGGA | 2 cut(s) | 894, 2053 |
| BseBI | CCWGG | 8 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 3582 |
| BseDI | CCNNGG | 5 cut(s) | 1023, 2117, 2956, 3580, 3581 |
| BseJI | GATNNNNATC | 2 cut(s) | 224, 2801 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 2117, 2140, 3287, 3395, 3461, 3586 |
| BseMI | GCAATG | 3 cut(s) | 1077, 1788, 3000 |
| BseMII | CTCAG | 7 cut(s) | 116, 125, 1029, 1232, 1430, 2511, 2545 |
| BseNI | ACTGG | 5 cut(s) | 586, 611, 1257, 1496, 2325 |
| BseRI | GAGGAG | 3 cut(s) | 145, 373, 3146 |
| BseSI | GKGCMC | 1 cut(s) | 2781 |
| BseYI | CCCAGC | 4 cut(s) | 958, 2391, 3395, 3602 |
| BsgI | GTGCAG | 1 cut(s) | 1544 |
| Bsh1236I | CGCG | 1 cut(s) | 2815 |
| Bsh1285I | CGRYCG | 2 cut(s) | 468, 3248 |
| BshFI | GGCC | 9 cut(s) | 542, 746, 834, 1204, 1495, 1879, 2133, 2779, 3073 |
| BshNI | GGYRCC | 2 cut(s) | 914, 1344 |
| BsiEI | CGRYCG | 2 cut(s) | 468, 3248 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1186, 2623 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1185, 3067 |
| BsiSI | CCGG | 8 cut(s) | 107, 159, 189, 895, 2054, 2865, 2990, 3248 |
| BsiWI | CGTACG | 1 cut(s) | 271 |
| BslFI | GGGAC | 6 cut(s) | 877, 2494, 2571, 3169, 3279, 3596 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 2117, 2140, 3287, 3395, 3461, 3586 |
| BsmAI | GTCTC | 1 cut(s) | 1604 |
| BsmFI | GGGAC | 6 cut(s) | 877, 2494, 2571, 3169, 3279, 3596 |
| BsmI | GAATGC | 3 cut(s) | 363, 810, 2378 |
| BsnI | GGCC | 9 cut(s) | 542, 746, 834, 1204, 1495, 1879, 2133, 2779, 3073 |
| BsoBI | CYCGRG | 2 cut(s) | 1185, 3067 |
| Bsp119I | TTCGAA | 1 cut(s) | 2401 |
| Bsp120I | GGGCCC | 1 cut(s) | 2777 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1186, 2623, 2781 |
| Bsp13I | TCCGGA | 2 cut(s) | 894, 2053 |
| Bsp1407I | TGTACA | 1 cut(s) | 444 |
| BspANI | GGCC | 9 cut(s) | 542, 746, 834, 1204, 1495, 1879, 2133, 2779, 3073 |
| BspCNI | CTCAG | 7 cut(s) | 115, 124, 1030, 1231, 1429, 2512, 2544 |
| BspEI | TCCGGA | 2 cut(s) | 894, 2053 |
| BspFNI | CGCG | 1 cut(s) | 2815 |
| BspHI | TCATGA | 1 cut(s) | 2710 |
| BspMAI | CTGCAG | 1 cut(s) | 1513 |
| BspMI | ACCTGC | 1 cut(s) | 3364 |
| BspOI | GCTAGC | 1 cut(s) | 620 |
| BspQI | GCTCTTC | 2 cut(s) | 1320, 3327 |
| BspT104I | TTCGAA | 1 cut(s) | 2401 |
| BspT107I | GGYRCC | 2 cut(s) | 914, 1344 |
| BspTI | CTTAAG | 1 cut(s) | 2690 |
| BsrDI | GCAATG | 3 cut(s) | 1077, 1788, 3000 |
| BsrFI | RCCGGY | 3 cut(s) | 106, 188, 2989 |
| BsrGI | TGTACA | 1 cut(s) | 444 |
| BsrI | ACTGG | 5 cut(s) | 586, 611, 1257, 1496, 2325 |
| BssAI | RCCGGY | 3 cut(s) | 106, 188, 2989 |
| BssECI | CCNNGG | 5 cut(s) | 1023, 2117, 2956, 3580, 3581 |
| BssNI | GRCGYC | 5 cut(s) | 83, 95, 212, 915, 1429 |
| BssT1I | CCWWGG | 2 cut(s) | 1023, 2956 |
| Bst2UI | CCWGG | 8 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 3582 |
| Bst4CI | ACNGT | 6 cut(s) | 58, 514, 1588, 1753, 2025, 2739 |
| Bst6I | CTCTTC | 4 cut(s) | 1320, 1959, 3327, 3519 |
| BstACI | GRCGYC | 5 cut(s) | 83, 95, 212, 915, 1429 |
| BstAFI | CTTAAG | 1 cut(s) | 2690 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2237 |
| BstAUI | TGTACA | 1 cut(s) | 444 |
| BstBI | TTCGAA | 1 cut(s) | 2401 |
| BstDEI | CTNAG | 9 cut(s) | 102, 111, 920, 1038, 1078, 1218, 1416, 2520, 2531 |
| BstEII | GGTNACC | 1 cut(s) | 2083 |
| BstFNI | CGCG | 1 cut(s) | 2815 |
| BstH2I | RGCGCY | 2 cut(s) | 918, 1799 |
| BstHHI | GCGC | 7 cut(s) | 262, 349, 566, 616, 917, 1798, 2378 |
| BstMAI | GTCTC | 1 cut(s) | 1604 |
| BstMCI | CGRYCG | 2 cut(s) | 468, 3248 |
| BstNI | CCWGG | 8 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 3582 |
| BstNSI | RCATGY | 3 cut(s) | 1022, 1091, 1595 |
| BstPI | GGTNACC | 1 cut(s) | 2083 |
| BstSCI | CCNGG | 9 cut(s) | 537, 949, 1096, 1248, 1990, 2116, 2275, 2864, 3580 |
| BstSFI | CTRYAG | 4 cut(s) | 1509, 1560, 2462, 3285 |
| BstSLI | GKGCMC | 1 cut(s) | 2781 |
| BstUI | CGCG | 1 cut(s) | 2815 |
| BstV2I | GAAGAC | 5 cut(s) | 155, 733, 940, 1427, 2036 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3416 |
| BsuI | GTATCC | 1 cut(s) | 1696 |
| BsuRI | GGCC | 9 cut(s) | 542, 746, 834, 1204, 1495, 1879, 2133, 2779, 3073 |
| BtrI | CACGTC | 1 cut(s) | 424 |
| BtsI | GCAGTG | 3 cut(s) | 503, 2067, 3483 |
| BtsIMutI | CAGTG | 7 cut(s) | 503, 579, 1264, 2067, 2735, 3310, 3483 |
| BveI | ACCTGC | 1 cut(s) | 3364 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1097, 2023 |
| CciI | TCATGA | 1 cut(s) | 2710 |
| CfoI | GCGC | 7 cut(s) | 262, 349, 566, 616, 917, 1798, 2378 |
| Cfr10I | RCCGGY | 3 cut(s) | 106, 188, 2989 |
| Cfr13I | GGNCC | 9 cut(s) | 46, 745, 833, 2051, 2131, 2777, 2778, 3293, 3610 |
| CseI | GACGC | 6 cut(s) | 31, 84, 201, 1418, 2148, 2820 |
| DdeI | CTNAG | 9 cut(s) | 102, 111, 920, 1038, 1078, 1218, 1416, 2520, 2531 |
| DinI | GGCGCC | 1 cut(s) | 916 |
| DraIII | CACNNNGTG | 1 cut(s) | 572 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 464 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1428 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 464 |
| EaeI | YGGCCR | 2 cut(s) | 540, 1877 |
| Eam1104I | CTCTTC | 4 cut(s) | 1320, 1959, 3327, 3519 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1428 |
| EarI | CTCTTC | 4 cut(s) | 1320, 1959, 3327, 3519 |
| EciI | GGCGGA | 4 cut(s) | 20, 58, 59, 3330 |
| Ecl136II | GAGCTC | 1 cut(s) | 1184 |
| Eco130I | CCWWGG | 2 cut(s) | 1023, 2956 |
| Eco147I | AGGCCT | 2 cut(s) | 1204, 3073 |
| Eco24I | GRGCYC | 2 cut(s) | 1186, 2781 |
| Eco32I | GATATC | 1 cut(s) | 3198 |
| Eco47I | GGWCC | 4 cut(s) | 46, 2051, 3293, 3610 |
| Eco53kI | GAGCTC | 1 cut(s) | 1184 |
| Eco57I | CTGAAG | 4 cut(s) | 2351, 2925, 3060, 3444 |
| Eco88I | CYCGRG | 2 cut(s) | 1185, 3067 |
| Eco91I | GGTNACC | 1 cut(s) | 2083 |
| EcoICRI | GAGCTC | 1 cut(s) | 1184 |
| EcoO109I | RGGNCCY | 3 cut(s) | 745, 2777, 3293 |
| EcoO65I | GGTNACC | 1 cut(s) | 2083 |
| EcoRII | CCWGG | 8 cut(s) | 537, 949, 1096, 1248, 1990, 2116, 2275, 3580 |
| EcoRV | GATATC | 1 cut(s) | 3198 |
| EcoT14I | CCWWGG | 2 cut(s) | 1023, 2956 |
| EcoT22I | ATGCAT | 2 cut(s) | 1292, 2529 |
| EcoT38I | GRGCYC | 2 cut(s) | 1186, 2781 |
| EgeI | GGCGCC | 1 cut(s) | 916 |
| EheI | GGCGCC | 1 cut(s) | 916 |
| ErhI | CCWWGG | 2 cut(s) | 1023, 2956 |
| FaqI | GGGAC | 6 cut(s) | 877, 2494, 2571, 3169, 3279, 3596 |
| FauI | CCCGC | 1 cut(s) | 201 |
| FauNDI | CATATG | 2 cut(s) | 343, 754 |
| FbaI | TGATCA | 2 cut(s) | 36, 1831 |
| FblI | GTMKAC | 2 cut(s) | 98, 3284 |
| FriOI | GRGCYC | 2 cut(s) | 1186, 2781 |
| FspAI | RTGCGCAY | 1 cut(s) | 2377 |
| FspI | TGCGCA | 2 cut(s) | 348, 2377 |
| GlaI | GCGC | 7 cut(s) | 261, 348, 565, 615, 916, 1797, 2377 |
| GsaI | CCCAGC | 4 cut(s) | 962, 2395, 3399, 3606 |
| GsuI | CTGGAG | 5 cut(s) | 1119, 1707, 1920, 3149, 3279 |
| HaeII | RGCGCY | 2 cut(s) | 918, 1799 |
| HaeIII | GGCC | 9 cut(s) | 542, 746, 834, 1204, 1495, 1879, 2133, 2779, 3073 |
| HapII | CCGG | 8 cut(s) | 107, 159, 189, 895, 2054, 2865, 2990, 3248 |
| HgaI | GACGC | 6 cut(s) | 31, 84, 201, 1418, 2148, 2820 |
| HhaI | GCGC | 7 cut(s) | 262, 349, 566, 616, 917, 1798, 2378 |
| Hin1I | GRCGYC | 5 cut(s) | 83, 95, 212, 915, 1429 |
| Hin6I | GCGC | 7 cut(s) | 260, 347, 564, 614, 915, 1796, 2376 |
| HinP1I | GCGC | 7 cut(s) | 260, 347, 564, 614, 915, 1796, 2376 |
| HincII | GTYRAC | 2 cut(s) | 99, 457 |
| HindII | GTYRAC | 2 cut(s) | 99, 457 |
| HindIII | AAGCTT | 2 cut(s) | 434, 735 |
| HpaII | CCGG | 8 cut(s) | 107, 159, 189, 895, 2054, 2865, 2990, 3248 |
| HphI | GGTGA | 4 cut(s) | 655, 2459, 2972, 3345 |
| Hpy166II | GTNNAC | 7 cut(s) | 99, 445, 457, 1433, 2676, 3242, 3285 |
| Hpy8I | GTNNAC | 7 cut(s) | 99, 445, 457, 1433, 2676, 3242, 3285 |
| Hpy99I | CGWCG | 4 cut(s) | 85, 88, 100, 217 |
| HpyAV | CCTTC | 9 cut(s) | 471, 483, 488, 736, 771, 1395, 1455, 3084, 3237 |
| HpyCH4III | ACNGT | 6 cut(s) | 58, 514, 1588, 1753, 2025, 2739 |
| HpyCH4IV | ACGT | 5 cut(s) | 83, 423, 2486, 3436, 3624 |
| HpyF3I | CTNAG | 9 cut(s) | 102, 111, 920, 1038, 1078, 1218, 1416, 2520, 2531 |
| HpySE526I | ACGT | 5 cut(s) | 83, 423, 2486, 3436, 3624 |
| Hsp92I | GRCGYC | 5 cut(s) | 83, 95, 212, 915, 1429 |
| HspAI | GCGC | 7 cut(s) | 260, 347, 564, 614, 915, 1796, 2376 |
| KasI | GGCGCC | 1 cut(s) | 914 |
| KflI | GGGWCCC | 1 cut(s) | 3293 |
| Kpn2I | TCCGGA | 2 cut(s) | 894, 2053 |
| KpnI | GGTACC | 1 cut(s) | 1348 |
| KroI | GCCGGC | 2 cut(s) | 106, 188 |
| KroNI | GCCGGC | 2 cut(s) | 108, 190 |
| Ksp22I | TGATCA | 2 cut(s) | 36, 1831 |
| LguI | GCTCTTC | 2 cut(s) | 1320, 3327 |
| LmnI | GCTCC | 8 cut(s) | 158, 360, 404, 763, 2045, 2552, 3043, 3264 |
| MaeII | ACGT | 5 cut(s) | 83, 423, 2486, 3436, 3624 |
| MaeIII | GTNAC | 4 cut(s) | 643, 899, 1948, 2083 |
| MfeI | CAATTG | 1 cut(s) | 1707 |
| MhlI | GDGCHC | 3 cut(s) | 1186, 2623, 2781 |
| MlsI | TGGCCA | 2 cut(s) | 542, 1879 |
| MluNI | TGGCCA | 2 cut(s) | 542, 1879 |
| Mly113I | GGCGCC | 1 cut(s) | 915 |
| MlyI | GAGTC | 5 cut(s) | 2, 94, 1275, 1606, 3383 |
| MmeI | TCCRAC | 4 cut(s) | 191, 924, 1446, 2023 |
| Mox20I | TGGCCA | 2 cut(s) | 542, 1879 |
| Mph1103I | ATGCAT | 2 cut(s) | 1292, 2529 |
| MroI | TCCGGA | 2 cut(s) | 894, 2053 |
| MroNI | GCCGGC | 2 cut(s) | 106, 188 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1662 |
| MscI | TGGCCA | 2 cut(s) | 542, 1879 |
| MslI | CAYNNNNRTG | 4 cut(s) | 287, 1128, 2658, 3210 |
| Msp20I | TGGCCA | 2 cut(s) | 542, 1879 |
| MspA1I | CMGCKG | 5 cut(s) | 2385, 2391, 2837, 2855, 2903 |
| MspCI | CTTAAG | 1 cut(s) | 2690 |
| MspI | CCGG | 8 cut(s) | 107, 159, 189, 895, 2054, 2865, 2990, 3248 |
| MspR9I | CCNGG | 9 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 2866, 3582 |
| MunI | CAATTG | 1 cut(s) | 1707 |
| Mva1269I | GAATGC | 3 cut(s) | 363, 810, 2378 |
| MvaI | CCWGG | 8 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 3582 |
| MvnI | CGCG | 1 cut(s) | 2815 |
| NaeI | GCCGGC | 2 cut(s) | 108, 190 |
| NarI | GGCGCC | 1 cut(s) | 915 |
| NciI | CCSGG | 1 cut(s) | 2866 |
| NdeI | CATATG | 2 cut(s) | 343, 754 |
| NgoMIV | GCCGGC | 2 cut(s) | 106, 188 |
| NheI | GCTAGC | 1 cut(s) | 616 |
| NmuCI | GTSAC | 1 cut(s) | 643 |
| NsbI | TGCGCA | 2 cut(s) | 348, 2377 |
| NsiI | ATGCAT | 2 cut(s) | 1292, 2529 |
| NspI | RCATGY | 3 cut(s) | 1022, 1091, 1595 |
| NspV | TTCGAA | 1 cut(s) | 2401 |
| OliI | CACNNNNGTG | 1 cut(s) | 3210 |
| PaeI | GCATGC | 1 cut(s) | 1022 |
| PaeR7I | CTCGAG | 2 cut(s) | 1185, 3067 |
| PagI | TCATGA | 1 cut(s) | 2710 |
| PaqCI | CACCTGC | 1 cut(s) | 3364 |
| PasI | CCCWGGG | 1 cut(s) | 3581 |
| PceI | AGGCCT | 2 cut(s) | 1204, 3073 |
| PciSI | GCTCTTC | 2 cut(s) | 1320, 3327 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 92, 209 |
| PctI | GAATGC | 3 cut(s) | 363, 810, 2378 |
| PdiI | GCCGGC | 2 cut(s) | 108, 190 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1662 |
| Pfl23II | CGTACG | 1 cut(s) | 271 |
| PflFI | GACNNNGTC | 1 cut(s) | 85 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2117 |
| PfoI | TCCNGGA | 2 cut(s) | 949, 1248 |
| PleI | GAGTC | 5 cut(s) | 2, 94, 1274, 1606, 3382 |
| PluTI | GGCGCC | 1 cut(s) | 918 |
| PpsI | GAGTC | 5 cut(s) | 2, 94, 1274, 1606, 3382 |
| PpuMI | RGGWCCY | 1 cut(s) | 3293 |
| Psp124BI | GAGCTC | 1 cut(s) | 1186 |
| Psp5II | RGGWCCY | 1 cut(s) | 3293 |
| Psp6I | CCWGG | 8 cut(s) | 537, 949, 1096, 1248, 1990, 2116, 2275, 3580 |
| PspEI | GGTNACC | 1 cut(s) | 2083 |
| PspFI | CCCAGC | 4 cut(s) | 958, 2391, 3395, 3602 |
| PspGI | CCWGG | 8 cut(s) | 537, 949, 1096, 1248, 1990, 2116, 2275, 3580 |
| PspLI | CGTACG | 1 cut(s) | 271 |
| PspOMI | GGGCCC | 1 cut(s) | 2777 |
| PspPI | GGNCC | 9 cut(s) | 46, 745, 833, 2051, 2131, 2777, 2778, 3293, 3610 |
| PspPPI | RGGWCCY | 1 cut(s) | 3293 |
| PspXI | VCTCGAGB | 1 cut(s) | 1185 |
| PstI | CTGCAG | 1 cut(s) | 1513 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1097, 2023 |
| PsyI | GACNNNGTC | 1 cut(s) | 85 |
| PvuII | CAGCTG | 3 cut(s) | 2391, 2837, 2903 |
| RseI | CAYNNNNRTG | 4 cut(s) | 287, 1128, 2658, 3210 |
| SacI | GAGCTC | 1 cut(s) | 1186 |
| SalI | GTCGAC | 1 cut(s) | 97 |
| SapI | GCTCTTC | 2 cut(s) | 1320, 3327 |
| Sau96I | GGNCC | 9 cut(s) | 46, 745, 833, 2051, 2131, 2777, 2778, 3293, 3610 |
| ScaI | AGTACT | 1 cut(s) | 1500 |
| SchI | GAGTC | 5 cut(s) | 2, 94, 1275, 1606, 3383 |
| ScrFI | CCNGG | 9 cut(s) | 539, 951, 1098, 1250, 1992, 2118, 2277, 2866, 3582 |
| SduI | GDGCHC | 3 cut(s) | 1186, 2623, 2781 |
| SfcI | CTRYAG | 4 cut(s) | 1509, 1560, 2462, 3285 |
| SfoI | GGCGCC | 1 cut(s) | 916 |
| Sfr274I | CTCGAG | 2 cut(s) | 1185, 3067 |
| SfuI | TTCGAA | 1 cut(s) | 2401 |
| SinI | GGWCC | 4 cut(s) | 46, 2051, 3293, 3610 |
| SlaI | CTCGAG | 2 cut(s) | 1185, 3067 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 287, 1128, 2658, 3210 |
| SmlI | CTYRAG | 5 cut(s) | 1185, 1367, 2415, 2690, 3067 |
| SmoI | CTYRAG | 5 cut(s) | 1185, 1367, 2415, 2690, 3067 |
| SphI | GCATGC | 1 cut(s) | 1022 |
| SseBI | AGGCCT | 2 cut(s) | 1204, 3073 |
| SspDI | GGCGCC | 1 cut(s) | 914 |
| SspI | AATATT | 2 cut(s) | 780, 2824 |
| SstI | GAGCTC | 1 cut(s) | 1186 |
| StuI | AGGCCT | 2 cut(s) | 1204, 3073 |
| StyD4I | CCNGG | 9 cut(s) | 537, 949, 1096, 1248, 1990, 2116, 2275, 2864, 3580 |
| StyI | CCWWGG | 2 cut(s) | 1023, 2956 |
| TaaI | ACNGT | 6 cut(s) | 58, 514, 1588, 1753, 2025, 2739 |
| TaiI | ACGT | 5 cut(s) | 86, 426, 2489, 3439, 3627 |
| TaqI | TCGA | 8 cut(s) | 98, 203, 1186, 1617, 2123, 2401, 3068, 3194 |
| TaqII | GACCGA | 1 cut(s) | 454 |
| TatI | WGTACW | 3 cut(s) | 444, 1498, 2197 |
| TauI | GCSGC | 4 cut(s) | 131, 251, 2388, 2818 |
| TscAI | CASTG | 7 cut(s) | 503, 586, 1264, 2074, 2742, 3310, 3490 |
| TseFI | GTSAC | 1 cut(s) | 643 |
| Tsp45I | GTSAC | 1 cut(s) | 643 |
| TspGWI | ACGGA | 5 cut(s) | 930, 1378, 2982, 3270, 3378 |
| TspRI | CASTG | 7 cut(s) | 503, 586, 1264, 2074, 2742, 3310, 3490 |
| Tth111I | GACNNNGTC | 1 cut(s) | 85 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2117 |
| Vha464I | CTTAAG | 1 cut(s) | 2690 |
| VpaK11BI | GGWCC | 4 cut(s) | 46, 2051, 3293, 3610 |
| XapI | RAATTY | 6 cut(s) | 546, 713, 1029, 1362, 3011, 3508 |
| XbaI | TCTAGA | 1 cut(s) | 1178 |
| XceI | RCATGY | 3 cut(s) | 1022, 1091, 1595 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 603 |
| XhoI | CTCGAG | 2 cut(s) | 1185, 3067 |
| XmiI | GTMKAC | 2 cut(s) | 98, 3284 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1662 |
| ZraI | GACGTC | 1 cut(s) | 84 |
| ZrmI | AGTACT | 1 cut(s) | 1500 |
| Zsp2I | ATGCAT | 2 cut(s) | 1292, 2529 |