Prupe.7G093700_v2.0.a1

ATP-dependent RNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0007834
Physical Location & Seq
Forward (+)
12598978 .. 12605498
6521 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G093700.1

Sequence Viewer

Length: 3105 bp
ATGTCAGTCCGCTTCCTCTTGGGCACAAGTAACTTCTCGCTTTCCAGACACCTTCTCCTCGCCGCGCCCAAAATCTTCACCTTTCGCTCTGGCATTTCAACCCTCGCCATGTCCAGCCGCCCCAACATCCGAGGCGGTCGCCGAGGCGGCCCCAACTCCGGCGGAGGCCGCCGCGGAGGCAGTGGCCGAGGTCGTGGAGGTGGCCGCGGCGGTGGCGAACAGCGCTGGTGGGACCCGGTATGGCGAGCCGAGCGCCTGAGGCAACAAGCAGCGGAGATGGAAGTGCTTGATGAGAATGAATGGTGGGGAAAGATGGAGCAGATGAAGAACGGGCCGGAGCAAGAGATGGTGATCAAGCGCAATTTTAGTCGCAATGATCAGCAAACCCTATCTGACATGGCTTATCAACTGGGGCTTCACTTCCATGCGTATAATAAAGGGAAGGCTCTTGTGGTCAGCAAAGTTCCGTTGCCGGATTACAGAGCAGATCTTGATGAGCGTCATGGTTCCACACAAAAAGAGATTAAAATGTCCACGGAGACTGCCGACAGAGTTGGGAGTCTTTTGCGCAGCTCAGAGTCACAGGGAGAGGTATCTGTTAATGTGGCTTCTGGGTCTGGCCAGGGAAGCAAACAAACTTCTGCTAGTGTAAATTCAAGCAAACCTGTCTCCCAGTTAGAGCCTGATACTGTAAAGGAGAAAGAGAAACTTAGCCGTCAACTTAAGGAGAGGCAGGAACAAATGAAGGTGAGCAATAGTTTGAAAGCAATGCAGTTGTTTCGAGAAAAGCTTCCTGCATTCAAAATGAAGTCTGAATTTCTTAGAGCTGTGTCAGAAAATCAGGTCTTGGTAGTCTCTGGGGAGACAGGTTGTGGAAAAACAACACAGCTTCCTCAATTTATTCTAGAAGATGAGATTTCACGTCTACATGGTGCTGACTGCAACATAATATGCACACAACCTCGTCGTATTTCTGCTGTGTCTGTTGCAGCTCGTATATCCTCCGAAAGGGGAGAGAATCTTGGTGAAACTGTTGGTTATCAGATCCGCCTGGAATCAAAGCGTTCTGCTCAAACACGACTCCTATTTTGCACCACTGGAGTATTACTTCGACAGTTGGTTCAAGACCCCATGCTAACTGGCGTGAGCCACTTGCTAGTGGATGAAATCCATGAAAGAGGCATGAACGAGGACTTTTTACTAATAATTTTGCGTGACCTTCTTCCTCGGCGTCCAGATCTACGATTAATTCTAATGAGTGCCACCATCAATGCGGACTTGTTCTCCAAATACTTTGGAAATTGCCCAACAATACATATACCAGGATTAACTTTCCCTGTGGCAGAATTATTTCTAGAAGACATTCTAGAGAAAACTCGTTATATTGTCAAGTCAGAGTTTGACAACTTGGAAGGGGGAAATTCCAGGAGAAGAAGGAGACAGCAAGATTCCAAGAAGGATCCTTTAACTGAATTATTTGAGGATGTTGATATTGATGCTCACTACAGAAATTACAGCACATCTACAAGAAAGTCTCTTGAAGCGTGGTCTGGTTCACAGCTTGACTTGGGTCTGGTGGAGGCAACAATTGAACATATATGTCGCCATGAGAGAGATGGAGCAATTCTTGTTTTCCTTACAGGCTGGGATGACATTTCAAAGTTACTTGACAAAATTAAGGGAAATAGATTCCTCGGAGATCCTACAAAGTATATGGTTCTTCCCCTGCATGGGTCCATGCCTACCGTCAATCAACGCGAAATATTTGATCGTCCTCCCCTCAACAAAAGAAAAATTGTGCTGGCTACAAACATAGCAGAGAGTAGTATCACCATAGATGATGTTGTGTATGTCATAGACTGTGGAAAGGCAAAGGAAACCAGTTATGATGCTTTAAACAAGTTGGCTTGTCTGTTACCATCATGGATTTCAAAGGCTTCAGCACATCAGAGGCGAGGGCGTGCTGGCCGTGTGCAGCCTGGAGTTTGTTACAGACTATATCCAAAAATGATCCATGATGCAATGCTCCAATATCAGTTACCTGAAATTCTCCGAACACCTTTGCAAGAGCTATGCCTCCACATCAAAAGTTTGCAGCTTGGAGCTGTTGGGTCTTTTTTGGCTAAGGCACTTCAGCCACCAGATCCTCTTGCTGTTCAAAATGCAATCGAACTTCTCAAAACCATTGGAGCTTTAGATGACATAGAGGGGCTTACTCCGCTTGGTCACCATCTTTGCACACTACCATTGGATCCAAACATTGGGAAAATGCTTCTAATGGGTTCTATCTTTCAATGCCTGAATCCTGCCTTAACAATTGCAGCTGCCCTTGCTCATCGTGACCCTTTTGTCCTACCATTAAATAGGAAAGAGGATGCTGATGCTGCAAAACAATCCTTTGCTGGTGATTCATTCAGTGATCACATAGCTGTTGTCAAGGCTTTTGAAGGATGGAAGGAAGCCAAACATAACGGAACGGGAAAAACATTCTGTTGGGATAACTTTTTATCCCCGGTAACGTTGCAGATGATGGAGGATATGAGGATCCAGTTTCTAGATCTATTATCAAATATTGGCTTTCTTGACAAATCCAGGGGTGCTAACGCTTACAATCAATACAGCCATGACCTGGAGATGGTATGTGCAATCCTCTGTGCTGGGCTCTATCCGAATGTTGTGCAGTGTAAAAGAAGAGGAAAGCGGACAGCATTCTATACTAAAGAAGTTGGTAAAATTGATATCCATCCTGCATCGGTCAATGCTGGGGTTCATTTATTCCCTCTCCCTTACATGGTTTATAGTGAAAAAGTGAAGACAACCAACATTTTCATTCGAGACTCTACAAATATATCAGATTATGCTTTACTTCTGTTTGGTGGTAGTCTTATCCCTAGCAAGACTGGTGAGGGTATTGAGATGCTTGGAGGTTACCTTCATTTCTCTGCATCAAAGAGTGTTTTAGAATTAATTCGGAAATTGCGTGGTGAACTTGACAAGCTTCTAAACAGGAAGATTGACAACCCAGGATTGGACGTCTCAAGCGAGGGAAAGGGAGTGGTTTCGGCTGTGGTTGAGCTATTGCATAGTCAAAATGTACGATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000976 GO:0000977 GO:0000978 GO:0000987 GO:0001012 GO:0001067 GO:0001503 GO:0001817 GO:0001819 GO:0002151 GO:0002791 GO:0002793 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003723 GO:0003724 GO:0003725 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0008186 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010467 GO:0010468 GO:0010501 GO:0010556 GO:0010557 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010638 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031330 GO:0032204 GO:0032206 GO:0032479 GO:0032481 GO:0032501 GO:0032647 GO:0032727 GO:0032879 GO:0032880 GO:0033043 GO:0033044 GO:0034641 GO:0042623 GO:0042826 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043489 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050707 GO:0050708 GO:0050714 GO:0050715 GO:0050789 GO:0050794 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051052 GO:0051054 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051222 GO:0051223 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051254 GO:0051880 GO:0060255 GO:0065007 GO:0065008 GO:0070034 GO:0070035 GO:0070201 GO:0071704 GO:0080090 GO:0090087 GO:0090304 GO:0090669 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1902369 GO:1902680 GO:1902739 GO:1902741 GO:1903506 GO:1903508 GO:1903530 GO:1903532 GO:1904951 GO:1990837 GO:2000112 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

1035

Amino Acids

115.31

Weight (kDa)

8.93

Isoelectric Point (pI)

48.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2348
AatII GACGTC 1 cut(s) 3036
Acc16I TGCGCA 1 cut(s) 569
AccB7I CCANNNNNTGG 2 cut(s) 2261, 2629
AccI GTMKAC 1 cut(s) 925
AccII CGCG 4 cut(s) 65, 174, 207, 1758
AclI AACGTT 1 cut(s) 2519
AcoI YGGCCR 4 cut(s) 184, 202, 619, 1966
AcsI RAATTY 4 cut(s) 652, 815, 1420, 2046
AcuI CTGAAG 2 cut(s) 1923, 2117
AcyI GRCGYC 2 cut(s) 1231, 3033
AfaI GTAC 1 cut(s) 3096
AfeI AGCGCT 1 cut(s) 224
AfiI CCNNNNNNNGG 9 cut(s) 158, 1008, 1730, 1731, 2261, 2629, 2635, 2791, 3028
AflII CTTAAG 1 cut(s) 722
AjiI CACGTC 1 cut(s) 923
AjnI CCWGG 8 cut(s) 621, 1050, 1321, 1424, 1978, 2591, 2628, 3022
Alw26I GTCTC 8 cut(s) 533, 673, 857, 859, 1432, 1539, 2829, 3040
Aor51HI AGCGCT 1 cut(s) 224
AoxI GGCC 7 cut(s) 148, 166, 184, 202, 332, 619, 1966
ApeKI GCWGC 8 cut(s) 269, 570, 989, 1975, 2095, 2321, 2324, 2384
ApoI RAATTY 4 cut(s) 652, 815, 1420, 2046
ArsI GACNNNNNNTTYG 2 cut(s) 1071, 1103
AseI ATTAAT 2 cut(s) 1247, 2966
Asp700I GAANNNNTTC 4 cut(s) 789, 1350, 1362, 2967
AspLEI GCGC 5 cut(s) 67, 225, 255, 360, 570
AspS9I GGNCC 4 cut(s) 149, 232, 332, 1734
AsuC2I CCSGG 2 cut(s) 236, 2513
AsuHPI GGTGA 9 cut(s) 70, 361, 760, 1037, 1822, 2219, 2417, 2915, 2996
AvaII GGWCC 2 cut(s) 232, 1734
AxyI CCTNAGG 1 cut(s) 257
BaeGI GKGCMC 1 cut(s) 26
BalI TGGCCA 1 cut(s) 621
BamHI GGATCC 3 cut(s) 1459, 2251, 2544
BanII GRGCYC 1 cut(s) 2664
BbsI GAAGAC 2 cut(s) 1365, 2819
BbvI GCAGC 8 cut(s) 281, 582, 1001, 1987, 2107, 2311, 2333, 2371
BceAI ACGGC 2 cut(s) 699, 1953
BcgI CGANNNNNNTGC 4 cut(s) 761, 795, 2659, 2693
BciT130I CCWGG 8 cut(s) 623, 1052, 1323, 1426, 1980, 2593, 2630, 3024
BclI TGATCA 3 cut(s) 351, 376, 2419
BcnI CCSGG 2 cut(s) 236, 2513
BcoDI GTCTC 8 cut(s) 533, 673, 857, 859, 1432, 1539, 2829, 3040
BfaI CTAG 7 cut(s) 645, 905, 1157, 1355, 1367, 2555, 2892
BfmI CTRYAG 1 cut(s) 1504
BfoI RGCGCY 2 cut(s) 226, 256
BfrI CTTAAG 1 cut(s) 722
BglI GCCNNNNNGGC 2 cut(s) 147, 177
BglII AGATCT 3 cut(s) 487, 1237, 2557
Bme18I GGWCC 2 cut(s) 232, 1734
BmgBI CACGTC 1 cut(s) 923
BmgT120I GGNCC 4 cut(s) 149, 232, 332, 1734
BmiI GGNNCC 8 cut(s) 151, 233, 234, 508, 1461, 1735, 2253, 2546
BmrI ACTGGG 2 cut(s) 419, 667
BmsI GCATC 8 cut(s) 1486, 1879, 2008, 2365, 2371, 2759, 2907, 2954
BmuI ACTGGG 2 cut(s) 419, 667
BoxI GACNNNNGTC 1 cut(s) 1569
BpiI GAAGAC 2 cut(s) 1365, 2819
BpmI CTGGAG 3 cut(s) 1119, 2001, 2651
Bpu10I CCTNAGC 1 cut(s) 2124
BpuEI CTTGAG 1 cut(s) 3022
BpuMI CCSGG 2 cut(s) 236, 2513
BsaBI GATNNNNATC 2 cut(s) 350, 2742
BsaHI GRCGYC 2 cut(s) 1231, 3033
BsaXI ACNNNNNCTCC 4 cut(s) 39, 69, 1268, 1298
Bsc4I CCNNNNNNNGG 9 cut(s) 158, 1008, 1730, 1731, 2261, 2629, 2635, 2791, 3028
Bse1I ACTGG 7 cut(s) 414, 673, 1102, 1144, 1881, 2548, 2905
Bse21I CCTNAGG 1 cut(s) 257
Bse3DI GCAATG 3 cut(s) 379, 774, 2028
Bse8I GATNNNNATC 2 cut(s) 350, 2742
BseBI CCWGG 8 cut(s) 623, 1052, 1323, 1426, 1980, 2593, 2630, 3024
BseGI GGATG 7 cut(s) 126, 1168, 1489, 1654, 2380, 2456, 2743
BseJI GATNNNNATC 2 cut(s) 350, 2742
BseLI CCNNNNNNNGG 9 cut(s) 158, 1008, 1730, 1731, 2261, 2629, 2635, 2791, 3028
BseMI GCAATG 3 cut(s) 379, 774, 2028
BseMII CTCAG 2 cut(s) 248, 588
BseNI ACTGG 7 cut(s) 414, 673, 1102, 1144, 1881, 2548, 2905
BseRI GAGGAG 1 cut(s) 47
BseSI GKGCMC 1 cut(s) 26
BseXI GCAGC 8 cut(s) 281, 582, 1001, 1987, 2107, 2311, 2333, 2371
BseYI CCCAGC 3 cut(s) 1644, 2657, 2762
BsgI GTGCAG 2 cut(s) 1994, 2699
Bsh1236I CGCG 4 cut(s) 65, 174, 207, 1758
Bsh1285I CGRYCG 1 cut(s) 139
BshFI GGCC 7 cut(s) 150, 168, 186, 204, 334, 621, 1968
BsiEI CGRYCG 1 cut(s) 139
BsiSI CCGG 5 cut(s) 159, 236, 335, 473, 2513
BslFI GGGAC 1 cut(s) 245
BslI CCNNNNNNNGG 9 cut(s) 158, 1008, 1730, 1731, 2261, 2629, 2635, 2791, 3028
BsmAI GTCTC 8 cut(s) 533, 673, 857, 859, 1432, 1539, 2829, 3040
BsmBI CGTCTC 1 cut(s) 3040
BsmFI GGGAC 1 cut(s) 245
BsmI GAATGC 2 cut(s) 797, 2708
BsnI GGCC 7 cut(s) 150, 168, 186, 204, 334, 621, 1968
Bsp1286I GDGCHC 2 cut(s) 26, 2664
BspANI GGCC 7 cut(s) 150, 168, 186, 204, 334, 621, 1968
BspCNI CTCAG 2 cut(s) 249, 587
BspFNI CGCG 4 cut(s) 65, 174, 207, 1758
BspLI GGNNCC 8 cut(s) 151, 233, 234, 508, 1461, 1735, 2253, 2546
BspTI CTTAAG 1 cut(s) 722
BsrDI GCAATG 3 cut(s) 379, 774, 2028
BsrI ACTGG 7 cut(s) 414, 673, 1102, 1144, 1881, 2548, 2905
BssNI GRCGYC 2 cut(s) 1231, 3033
Bst2UI CCWGG 8 cut(s) 623, 1052, 1323, 1426, 1980, 2593, 2630, 3024
Bst4CI ACNGT 5 cut(s) 691, 1033, 1116, 1747, 1862
Bst6I CTCTTC 1 cut(s) 2686
BstACI GRCGYC 2 cut(s) 1231, 3033
BstAFI CTTAAG 1 cut(s) 722
BstC8I GCNNGC 4 cut(s) 246, 1803, 1962, 1966
BstDEI CTNAG 5 cut(s) 257, 574, 710, 821, 2124
BstDSI CCRYGG 3 cut(s) 172, 205, 534
BstEII GGTNACC 2 cut(s) 2225, 2927
BstENI CCTNNNNNAGG 1 cut(s) 1006
BstF5I GGATG 7 cut(s) 126, 1168, 1489, 1654, 2380, 2456, 2743
BstFNI CGCG 4 cut(s) 65, 174, 207, 1758
BstH2I RGCGCY 2 cut(s) 226, 256
BstHHI GCGC 5 cut(s) 67, 225, 255, 360, 570
BstMAI GTCTC 8 cut(s) 533, 673, 857, 859, 1432, 1539, 2829, 3040
BstMCI CGRYCG 1 cut(s) 139
BstNI CCWGG 8 cut(s) 623, 1052, 1323, 1426, 1980, 2593, 2630, 3024
BstPAI GACNNNNGTC 1 cut(s) 1569
BstPI GGTNACC 2 cut(s) 2225, 2927
BstSFI CTRYAG 1 cut(s) 1504
BstSLI GKGCMC 1 cut(s) 26
BstUI CGCG 4 cut(s) 65, 174, 207, 1758
BstV1I GCAGC 8 cut(s) 281, 582, 1001, 1987, 2107, 2311, 2333, 2371
BstV2I GAAGAC 2 cut(s) 1365, 2819
BstX2I RGATCY 9 cut(s) 487, 1044, 1237, 1459, 1699, 2143, 2251, 2544, 2557
BstYI RGATCY 9 cut(s) 487, 1044, 1237, 1459, 1699, 2143, 2251, 2544, 2557
Bsu36I CCTNAGG 1 cut(s) 257
BsuRI GGCC 7 cut(s) 150, 168, 186, 204, 334, 621, 1968
BtgI CCRYGG 3 cut(s) 172, 205, 534
BtrI CACGTC 1 cut(s) 923
BtsCI GGATG 7 cut(s) 126, 1168, 1489, 1654, 2380, 2456, 2743
BtsI GCAGTG 2 cut(s) 187, 2687
BtsIMutI CAGTG 4 cut(s) 187, 1095, 2422, 2687
Cac8I GCNNGC 4 cut(s) 246, 1803, 1962, 1966
CfoI GCGC 5 cut(s) 67, 225, 255, 360, 570
Cfr13I GGNCC 4 cut(s) 149, 232, 332, 1734
Cfr42I CCGCGG 2 cut(s) 175, 208
CseI GACGC 2 cut(s) 488, 1220
Csp6I GTAC 1 cut(s) 3095
CviQI GTAC 1 cut(s) 3095
DdeI CTNAG 5 cut(s) 257, 574, 710, 821, 2124
DraI TTTAAA 1 cut(s) 1896
DrdI GACNNNNNNGTC 1 cut(s) 2348
DseDI GACNNNNNNGTC 1 cut(s) 2348
EaeI YGGCCR 4 cut(s) 184, 202, 619, 1966
Eam1104I CTCTTC 1 cut(s) 2686
EarI CTCTTC 1 cut(s) 2686
EciI GGCGGA 2 cut(s) 177, 1037
Eco24I GRGCYC 1 cut(s) 2664
Eco32I GATATC 1 cut(s) 2740
Eco47I GGWCC 2 cut(s) 232, 1734
Eco47III AGCGCT 1 cut(s) 224
Eco57I CTGAAG 2 cut(s) 1923, 2117
Eco81I CCTNAGG 1 cut(s) 257
Eco91I GGTNACC 2 cut(s) 2225, 2927
EcoNI CCTNNNNNAGG 1 cut(s) 1006
EcoO109I RGGNCCY 1 cut(s) 232
EcoO65I GGTNACC 2 cut(s) 2225, 2927
EcoRII CCWGG 8 cut(s) 621, 1050, 1321, 1424, 1978, 2591, 2628, 3022
EcoRV GATATC 1 cut(s) 2740
EcoT38I GRGCYC 1 cut(s) 2664
Esp3I CGTCTC 1 cut(s) 3040
FalI AAGNNNNNCTT 2 cut(s) 693, 725
FaqI GGGAC 1 cut(s) 245
FbaI TGATCA 3 cut(s) 351, 376, 2419
FblI GTMKAC 1 cut(s) 925
FokI GGATG 7 cut(s) 113, 1175, 1496, 1661, 2387, 2463, 2730
FriOI GRGCYC 1 cut(s) 2664
FspBI CTAG 7 cut(s) 645, 905, 1157, 1355, 1367, 2555, 2892
FspI TGCGCA 1 cut(s) 569
GlaI GCGC 5 cut(s) 66, 224, 254, 359, 569
GsaI CCCAGC 3 cut(s) 1648, 2661, 2766
GsuI CTGGAG 3 cut(s) 1119, 2001, 2651
HaeII RGCGCY 2 cut(s) 226, 256
HaeIII GGCC 7 cut(s) 150, 168, 186, 204, 334, 621, 1968
HapII CCGG 5 cut(s) 159, 236, 335, 473, 2513
HgaI GACGC 2 cut(s) 488, 1220
HhaI GCGC 5 cut(s) 67, 225, 255, 360, 570
Hin1I GRCGYC 2 cut(s) 1231, 3033
Hin6I GCGC 5 cut(s) 65, 223, 253, 358, 568
HinP1I GCGC 5 cut(s) 65, 223, 253, 358, 568
HincII GTYRAC 1 cut(s) 719
HindII GTYRAC 1 cut(s) 719
HindIII AAGCTT 2 cut(s) 788, 2996
HpaII CCGG 5 cut(s) 159, 236, 335, 473, 2513
HphI GGTGA 9 cut(s) 70, 361, 760, 1037, 1822, 2219, 2417, 2915, 2996
Hpy166II GTNNAC 5 cut(s) 534, 719, 926, 1556, 2987
Hpy8I GTNNAC 5 cut(s) 534, 719, 926, 1556, 2987
Hpy99I CGWCG 1 cut(s) 969
HpyCH4III ACNGT 5 cut(s) 691, 1033, 1116, 1747, 1862
HpyCH4IV ACGT 3 cut(s) 922, 2519, 3033
HpyF3I CTNAG 5 cut(s) 257, 574, 710, 821, 2124
HpySE526I ACGT 3 cut(s) 922, 2519, 3033
Hsp92I GRCGYC 2 cut(s) 1231, 3033
HspAI GCGC 5 cut(s) 65, 223, 253, 358, 568
KflI GGGWCCC 1 cut(s) 232
Ksp22I TGATCA 3 cut(s) 351, 376, 2419
KspI CCGCGG 2 cut(s) 175, 208
LmnI GCTCC 6 cut(s) 316, 337, 1619, 2031, 2102, 2189
Lsp1109I GCAGC 8 cut(s) 281, 582, 1001, 1987, 2107, 2311, 2333, 2371
LweI GCATC 8 cut(s) 1486, 1879, 2008, 2365, 2371, 2759, 2907, 2954
MaeI CTAG 7 cut(s) 645, 905, 1157, 1355, 1367, 2555, 2892
MaeII ACGT 3 cut(s) 922, 2519, 3033
MfeI CAATTG 2 cut(s) 1587, 2316
MflI RGATCY 9 cut(s) 487, 1044, 1237, 1459, 1699, 2143, 2251, 2544, 2557
MhlI GDGCHC 2 cut(s) 26, 2664
MlsI TGGCCA 1 cut(s) 621
MluNI TGGCCA 1 cut(s) 621
MlyI GAGTC 4 cut(s) 568, 587, 1074, 2831
Mox20I TGGCCA 1 cut(s) 621
MroXI GAANNNNTTC 4 cut(s) 789, 1350, 1362, 2967
MscI TGGCCA 1 cut(s) 621
MslI CAYNNNNRTG 1 cut(s) 423
Msp20I TGGCCA 1 cut(s) 621
MspA1I CMGCKG 4 cut(s) 174, 207, 272, 2324
MspCI CTTAAG 1 cut(s) 722
MspI CCGG 5 cut(s) 159, 236, 335, 473, 2513
MunI CAATTG 2 cut(s) 1587, 2316
Mva1269I GAATGC 2 cut(s) 797, 2708
MvaI CCWGG 8 cut(s) 623, 1052, 1323, 1426, 1980, 2593, 2630, 3024
MvnI CGCG 4 cut(s) 65, 174, 207, 1758
NciI CCSGG 2 cut(s) 236, 2513
NlaIV GGNNCC 8 cut(s) 151, 233, 234, 508, 1461, 1735, 2253, 2546
NmeAIII GCCGAG 4 cut(s) 167, 212, 274, 1207
NmuCI GTSAC 4 cut(s) 579, 1214, 2225, 2339
NsbI TGCGCA 1 cut(s) 569
PcsI WCGNNNNNNNCGW 2 cut(s) 2977, 3039
PctI GAATGC 2 cut(s) 797, 2708
PdmI GAANNNNTTC 4 cut(s) 789, 1350, 1362, 2967
PfeI GAWTC 6 cut(s) 1018, 1055, 1448, 1689, 2302, 2408
PflMI CCANNNNNTGG 2 cut(s) 2261, 2629
PfoI TCCNGGA 1 cut(s) 1424
PleI GAGTC 4 cut(s) 567, 586, 1074, 2831
PpsI GAGTC 4 cut(s) 567, 586, 1074, 2831
PpuMI RGGWCCY 1 cut(s) 232
PshAI GACNNNNGTC 1 cut(s) 1569
PshBI ATTAAT 2 cut(s) 1247, 2966
Psp1406I AACGTT 1 cut(s) 2519
Psp5II RGGWCCY 1 cut(s) 232
Psp6I CCWGG 8 cut(s) 621, 1050, 1321, 1424, 1978, 2591, 2628, 3022
PspEI GGTNACC 2 cut(s) 2225, 2927
PspFI CCCAGC 3 cut(s) 1644, 2657, 2762
PspGI CCWGG 8 cut(s) 621, 1050, 1321, 1424, 1978, 2591, 2628, 3022
PspN4I GGNNCC 8 cut(s) 151, 233, 234, 508, 1461, 1735, 2253, 2546
PspPI GGNCC 4 cut(s) 149, 232, 332, 1734
PspPPI RGGWCCY 1 cut(s) 232
PsuI RGATCY 9 cut(s) 487, 1044, 1237, 1459, 1699, 2143, 2251, 2544, 2557
PvuII CAGCTG 1 cut(s) 2324
RsaI GTAC 1 cut(s) 3096
RsaNI GTAC 1 cut(s) 3095
RseI CAYNNNNRTG 1 cut(s) 423
SacII CCGCGG 2 cut(s) 175, 208
Sau96I GGNCC 4 cut(s) 149, 232, 332, 1734
SchI GAGTC 4 cut(s) 568, 587, 1074, 2831
SduI GDGCHC 2 cut(s) 26, 2664
SfaNI GCATC 8 cut(s) 1486, 1879, 2008, 2365, 2371, 2759, 2907, 2954
SfcI CTRYAG 1 cut(s) 1504
Sfr303I CCGCGG 2 cut(s) 175, 208
SgrBI CCGCGG 2 cut(s) 175, 208
SinI GGWCC 2 cut(s) 232, 1734
SmiMI CAYNNNNRTG 1 cut(s) 423
SmlI CTYRAG 2 cut(s) 722, 3037
SmoI CTYRAG 2 cut(s) 722, 3037
SspI AATATT 2 cut(s) 1764, 2572
SspMI CTAG 7 cut(s) 645, 905, 1157, 1355, 1367, 2555, 2892
TaaI ACNGT 5 cut(s) 691, 1033, 1116, 1747, 1862
TaiI ACGT 3 cut(s) 925, 2522, 3036
TaqI TCGA 4 cut(s) 781, 1111, 2169, 2833
TaqII GACCGA 1 cut(s) 2743
TauI GCSGC 7 cut(s) 65, 120, 150, 171, 174, 207, 210
TfiI GAWTC 6 cut(s) 1018, 1055, 1448, 1689, 2302, 2408
TscAI CASTG 4 cut(s) 187, 1102, 2422, 2687
TseFI GTSAC 4 cut(s) 579, 1214, 2225, 2339
TseI GCWGC 8 cut(s) 269, 570, 989, 1975, 2095, 2321, 2324, 2384
Tsp45I GTSAC 4 cut(s) 579, 1214, 2225, 2339
TspGWI ACGGA 3 cut(s) 456, 551, 2487
TspRI CASTG 4 cut(s) 187, 1102, 2422, 2687
Van91I CCANNNNNTGG 2 cut(s) 2261, 2629
Vha464I CTTAAG 1 cut(s) 722
VpaK11BI GGWCC 2 cut(s) 232, 1734
VspI ATTAAT 2 cut(s) 1247, 2966
XagI CCTNNNNNAGG 1 cut(s) 1006
XapI RAATTY 4 cut(s) 652, 815, 1420, 2046
XbaI TCTAGA 4 cut(s) 904, 1354, 1366, 2554
XcmI CCANNNNNNNNNTGG 1 cut(s) 1613
XmiI GTMKAC 1 cut(s) 925
XmnI GAANNNNTTC 4 cut(s) 789, 1350, 1362, 2967
XspI CTAG 7 cut(s) 645, 905, 1157, 1355, 1367, 2555, 2892
ZraI GACGTC 1 cut(s) 3034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.