ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35920 AT2G35920 AT2G35920 |
| fragaria_vesca | FvH4_6g20440 FvH4_6g20440 |
| malus_domestica | MD12G1041500.v1.1 |
| prunus_persica | Prupe.7G093700_v2.0.a1 |
| pyrus_communis | pycom12g03600 |
| rosa_chinensis | RchiOBHm_Chr3g0476281 |
| rosa_laevigata | RLG00000023781 RLG00000023783 RLG00000023785 |
| rosa_multiflora | Rmu_sc0000114.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00405420 Rroxscaffold_6G00405440 |
| rosa_rugosa | Rorug03G0153100 Rorug03G0153300 Rorug03G0153300 |
| rosa_samantha | Rh3AG204500 Rh3BG235900 Rh3CG230500 Rh3CG230600 Rh3DG230200 |
| rosa_wichuraiana | Rw3G018580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 37 |
| AciI | CCGC | 1 cut(s) | 109 |
| AclWI | GGATC | 1 cut(s) | 166 |
| AcsI | RAATTY | 1 cut(s) | 395 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 37, 436 |
| AgsI | TTSAA | 1 cut(s) | 395 |
| AjnI | CCWGG | 1 cut(s) | 154 |
| AluBI | AGCT | 2 cut(s) | 406, 484 |
| AluI | AGCT | 2 cut(s) | 406, 484 |
| AlwI | GGATC | 1 cut(s) | 166 |
| ApoI | RAATTY | 1 cut(s) | 395 |
| AspLEI | GCGC | 1 cut(s) | 390 |
| AsuHPI | GGTGA | 1 cut(s) | 221 |
| BbsI | GAAGAC | 1 cut(s) | 227 |
| BccI | CCATC | 3 cut(s) | 37, 159, 164 |
| BciT130I | CCWGG | 1 cut(s) | 156 |
| Bme1390I | CCNGG | 1 cut(s) | 156 |
| BmrFI | CCNGG | 1 cut(s) | 156 |
| BmsI | GCATC | 2 cut(s) | 315, 362 |
| BpiI | GAAGAC | 1 cut(s) | 227 |
| BpmI | CTGGAG | 1 cut(s) | 330 |
| BsaBI | GATNNNNATC | 1 cut(s) | 150 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 32, 62 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 37, 436 |
| Bse1I | ACTGG | 1 cut(s) | 313 |
| Bse8I | GATNNNNATC | 1 cut(s) | 150 |
| BseBI | CCWGG | 1 cut(s) | 156 |
| BseGI | GGATG | 3 cut(s) | 151, 294, 445 |
| BseJI | GATNNNNATC | 1 cut(s) | 150 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 37, 436 |
| BseMII | CTCAG | 1 cut(s) | 441 |
| BseNI | ACTGG | 1 cut(s) | 313 |
| BseYI | CCCAGC | 2 cut(s) | 65, 430 |
| BsgI | GTGCAG | 3 cut(s) | 29, 106, 107 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 37, 436 |
| BsmI | GAATGC | 1 cut(s) | 116 |
| Bsp143I | GATC | 1 cut(s) | 158 |
| BspACI | CCGC | 1 cut(s) | 109 |
| BspCNI | CTCAG | 1 cut(s) | 442 |
| BspPI | GGATC | 1 cut(s) | 166 |
| BsrI | ACTGG | 1 cut(s) | 313 |
| BssMI | GATC | 1 cut(s) | 158 |
| Bst2UI | CCWGG | 1 cut(s) | 156 |
| Bst6I | CTCTTC | 1 cut(s) | 94 |
| BstC8I | GCNNGC | 2 cut(s) | 12, 229 |
| BstDEI | CTNAG | 1 cut(s) | 450 |
| BstEII | GGTNACC | 1 cut(s) | 335 |
| BstF5I | GGATG | 3 cut(s) | 151, 294, 445 |
| BstHHI | GCGC | 1 cut(s) | 390 |
| BstKTI | GATC | 1 cut(s) | 161 |
| BstMBI | GATC | 1 cut(s) | 158 |
| BstNI | CCWGG | 1 cut(s) | 156 |
| BstPI | GGTNACC | 1 cut(s) | 335 |
| BstSCI | CCNGG | 1 cut(s) | 154 |
| BstV2I | GAAGAC | 1 cut(s) | 227 |
| BtsCI | GGATG | 3 cut(s) | 151, 294, 445 |
| BtsI | GCAGTG | 1 cut(s) | 95 |
| BtsIMutI | CAGTG | 1 cut(s) | 95 |
| Cac8I | GCNNGC | 2 cut(s) | 12, 229 |
| CfoI | GCGC | 1 cut(s) | 390 |
| CviAII | CATG | 2 cut(s) | 32, 199 |
| CviJI | RGCY | 7 cut(s) | 14, 30, 70, 227, 406, 484, 495 |
| CviKI_1 | RGCY | 7 cut(s) | 14, 30, 70, 227, 406, 484, 495 |
| DdeI | CTNAG | 1 cut(s) | 450 |
| DpnI | GATC | 1 cut(s) | 160 |
| DpnII | GATC | 1 cut(s) | 158 |
| DraI | TTTAAA | 1 cut(s) | 411 |
| Eam1104I | CTCTTC | 1 cut(s) | 94 |
| EarI | CTCTTC | 1 cut(s) | 94 |
| Eco32I | GATATC | 1 cut(s) | 148 |
| Eco91I | GGTNACC | 1 cut(s) | 335 |
| EcoO65I | GGTNACC | 1 cut(s) | 335 |
| EcoRII | CCWGG | 1 cut(s) | 154 |
| EcoRV | GATATC | 1 cut(s) | 148 |
| FaeI | CATG | 2 cut(s) | 35, 202 |
| FaiI | YATR | 9 cut(s) | 33, 51, 200, 207, 242, 257, 262, 492, 562 |
| FatI | CATG | 2 cut(s) | 31, 198 |
| FokI | GGATG | 3 cut(s) | 138, 281, 452 |
| GlaI | GCGC | 1 cut(s) | 389 |
| GsaI | CCCAGC | 2 cut(s) | 69, 434 |
| GsuI | CTGGAG | 1 cut(s) | 330 |
| HhaI | GCGC | 1 cut(s) | 390 |
| Hin1II | CATG | 2 cut(s) | 35, 202 |
| Hin6I | GCGC | 1 cut(s) | 388 |
| HinP1I | GCGC | 1 cut(s) | 388 |
| HindIII | AAGCTT | 1 cut(s) | 404 |
| HinfI | GANTC | 2 cut(s) | 245, 376 |
| HphI | GGTGA | 1 cut(s) | 221 |
| Hpy188I | TCNGA | 1 cut(s) | 381 |
| HpyAV | CCTTC | 1 cut(s) | 350 |
| HpyCH4V | TGCA | 6 cut(s) | 10, 53, 88, 123, 353, 490 |
| HpyF3I | CTNAG | 1 cut(s) | 450 |
| Hsp92II | CATG | 2 cut(s) | 35, 202 |
| HspAI | GCGC | 1 cut(s) | 388 |
| Kzo9I | GATC | 1 cut(s) | 158 |
| LpnPI | CCDG | 7 cut(s) | 51, 141, 168, 241, 294, 400, 444 |
| LweI | GCATC | 2 cut(s) | 315, 362 |
| MaeIII | GTNAC | 1 cut(s) | 335 |
| MalI | GATC | 1 cut(s) | 160 |
| MboI | GATC | 1 cut(s) | 158 |
| MboII | GAAGA | 3 cut(s) | 111, 232, 430 |
| MluCI | AATT | 5 cut(s) | 54, 383, 395, 499, 552 |
| MnlI | CCTC | 5 cut(s) | 95, 198, 307, 326, 445 |
| MseI | TTAA | 1 cut(s) | 410 |
| MslI | CAYNNNNRTG | 1 cut(s) | 323 |
| MspR9I | CCNGG | 1 cut(s) | 156 |
| Mva1269I | GAATGC | 1 cut(s) | 116 |
| MvaI | CCWGG | 1 cut(s) | 156 |
| NdeII | GATC | 1 cut(s) | 158 |
| NlaIII | CATG | 2 cut(s) | 35, 202 |
| PctI | GAATGC | 1 cut(s) | 116 |
| PfeI | GAWTC | 2 cut(s) | 245, 376 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 37 |
| PfoI | TCCNGGA | 1 cut(s) | 154 |
| Psp6I | CCWGG | 1 cut(s) | 154 |
| PspEI | GGTNACC | 1 cut(s) | 335 |
| PspFI | CCCAGC | 2 cut(s) | 65, 430 |
| PspGI | CCWGG | 1 cut(s) | 154 |
| RseI | CAYNNNNRTG | 1 cut(s) | 323 |
| SaqAI | TTAA | 1 cut(s) | 410 |
| Sau3AI | GATC | 1 cut(s) | 158 |
| ScrFI | CCNGG | 1 cut(s) | 156 |
| SetI | ASST | 4 cut(s) | 337, 342, 408, 486 |
| SfaNI | GCATC | 2 cut(s) | 315, 362 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 323 |
| Sse9I | AATT | 5 cut(s) | 54, 383, 395, 499, 552 |
| SsiI | CCGC | 1 cut(s) | 109 |
| StyD4I | CCNGG | 1 cut(s) | 154 |
| TasI | AATT | 5 cut(s) | 54, 383, 395, 499, 552 |
| TfiI | GAWTC | 2 cut(s) | 245, 376 |
| Tru1I | TTAA | 1 cut(s) | 410 |
| Tru9I | TTAA | 1 cut(s) | 410 |
| TscAI | CASTG | 1 cut(s) | 95 |
| TspDTI | ATGAA | 3 cut(s) | 167, 226, 332 |
| TspRI | CASTG | 1 cut(s) | 95 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 37 |
| XapI | RAATTY | 1 cut(s) | 395 |