Prupe.7G161800_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
16759505 .. 16764276
4772 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G161800.1

Sequence Viewer

Length: 1407 bp
ATGGTGACCCATTATTTATTATATGAAAATTGTCTCGCGGGACAAAAGACCCAGAATCTCACAGCGGTCGCCGGTCGCAACCCAACAGTGGGCGAGAGTGGCCTTCTTTCTTCTTCACTAGGCGCCGGTACACTAACAGACAGTACATGCCAAGCAATGCGGAGCCTACGACGCCGTTTCCACTTTCATTCTTCTTCTTCTTCTTCTTCACATCGCATTTTGTTTGCACTACTTACAGTTCTTGTATCACAGGCGCTTCAAGCAGCCTCACTCGTGGCGCCGAGATCCAATTGCTACGCTTTCGATAACTCTAGCCGCGTCGTCGATTTTAGTAGTTGGATTGGACATCCGTTTGAGTACGACGGGAAGGACTCCGACTTGGTGCTTCGATTTTGCAAAGATGTGGAGAGTAGATCACAAACGGGATATGTAGATTTTGGTCGATTTGATAAGTTCAACTACTTTGTTTCTGGTTCAGGACACGTTGACTTTGTTCAAGGGTTTTATAATGGCGACCTGGCGAATTGTGAGCACAGTTATGATAAATTGGGACGAACAGCTCAGGTAAACATCATATGTGGAAGTTGTTTAAATGGCCAATGCACAGGTGGACTTGGATGCATCTGCAAAGTCACTTATGAGTCGAGTTGCAGAGTTTTTCTCGAACTAGCTATTCCATGCGAGAAACCAGGACCACGAGTATTTAAGGGCTTCACTGTAGGTTTCCATCCACGGTCATGGGAACTTGTTTATGATGGCATGACTCAATTGGGCTATGAAAAGTCTCACCATGAGTTTAGCTTTGGGACTGAGCAGACACATGTAACGCTTTATATGACTGCAATTGCTTCCCTTTCGACTTTGGTGCAAAGACCTGTTATTAAGGTCTTACCAGAAAATGGTCTGGAGGTTAAGGTATCAGGGTCGGGAGCAACTGGGAGCCCTCCTACAACTTTGTCACCCACAATGTTAAATGTTGATTGGAGATGTGAAAAGGCTCGTGATACTCCATATGAAGTTAATATCACTATCCCAGTAGAGGGTTACGAGCCCATCCAGTTTTTTCTTGCCAAACTGTGTGAAAACAGGCAGAACCAAAATGGAAACAGTGCACGGGGATGGGCTATATTTGGGGTGTTATCCTGCATATTCGCTGTCTCATCGACCCTGTTTTGCTGTGGAGGATTTATTTACAAGACTCAAGTTGAAAGGAAGCGTGGGATTGATGCATTGCCGGGAATGACAATTCTATCTGCTTGTTTAGAAACTGTGAGTGACGGAGGGCACAGCTACACCCGACCAGAAGACCTTAATACTACTTTTGCCAGTGAAGCCTCTTGGGAACGCTCTTCTGCTTCTAGTCAAGGAACATCAAGGCCGAACGAAAGAAAATACGGTGCAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

469

Amino Acids

51.32

Weight (kDa)

6.85

Isoelectric Point (pI)

38.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 507
AccB1I GGYRCC 2 cut(s) 122, 277
AccB7I CCANNNNNTGG 1 cut(s) 899
AccII CGCG 2 cut(s) 38, 318
AciI CCGC 4 cut(s) 38, 65, 160, 316
AclWI GGATC 1 cut(s) 279
AcoI YGGCCR 1 cut(s) 595
AcyI GRCGYC 3 cut(s) 123, 172, 278
AfaI GTAC 3 cut(s) 130, 145, 359
AfiI CCNNNNNNNGG 5 cut(s) 88, 89, 899, 1039, 1040
AflIII ACRYGT 2 cut(s) 481, 820
AgsI TTSAA 4 cut(s) 260, 457, 497, 1208
AjnI CCWGG 2 cut(s) 516, 688
AluBI AGCT 4 cut(s) 560, 671, 801, 1290
AluI AGCT 4 cut(s) 560, 671, 801, 1290
Alw21I GWGCWC 2 cut(s) 534, 1114
Alw26I GTCTC 3 cut(s) 38, 789, 1162
Alw44I GTGCAC 1 cut(s) 1110
AlwI GGATC 1 cut(s) 279
AoxI GGCC 3 cut(s) 100, 595, 1376
ApaLI GTGCAC 1 cut(s) 1110
ApeKI GCWGC 1 cut(s) 263
AspLEI GCGC 3 cut(s) 125, 256, 280
AspS9I GGNCC 1 cut(s) 692
AsuC2I CCSGG 1 cut(s) 1236
AsuHPI GGTGA 3 cut(s) 16, 779, 951
AvaII GGWCC 1 cut(s) 692
BaeGI GKGCMC 2 cut(s) 1114, 1287
BalI TGGCCA 1 cut(s) 597
BanI GGYRCC 2 cut(s) 122, 277
BanII GRGCYC 2 cut(s) 944, 1053
BauI CACGAG 3 cut(s) 272, 696, 999
BbsI GAAGAC 1 cut(s) 1311
Bbv12I GWGCWC 2 cut(s) 534, 1114
BbvI GCAGC 1 cut(s) 275
BccI CCATC 4 cut(s) 735, 749, 1061, 1113
BceAI ACGGC 1 cut(s) 159
BcgI CGANNNNNNTGC 2 cut(s) 847, 881
BciT130I CCWGG 2 cut(s) 518, 690
BcnI CCSGG 1 cut(s) 1236
BcoDI GTCTC 3 cut(s) 38, 789, 1162
BfaI CTAG 4 cut(s) 119, 312, 668, 1359
BfmI CTRYAG 1 cut(s) 717
BfoI RGCGCY 3 cut(s) 126, 257, 281
BisI GCNGC 2 cut(s) 264, 316
BlsI GCNGC 2 cut(s) 265, 317
Bme1390I CCNGG 3 cut(s) 518, 690, 1236
Bme18I GGWCC 1 cut(s) 692
BmgT120I GGNCC 1 cut(s) 692
BmiI GGNNCC 4 cut(s) 124, 164, 279, 941
BmrFI CCNGG 3 cut(s) 518, 690, 1236
BmrI ACTGGG 2 cut(s) 945, 1028
BmsI GCATC 3 cut(s) 608, 630, 1216
BmuI ACTGGG 2 cut(s) 945, 1028
BpiI GAAGAC 1 cut(s) 1311
BplI GAGNNNNNCTC 2 cut(s) 645, 677
BpmI CTGGAG 1 cut(s) 926
Bpu10I CCTNAGC 1 cut(s) 561
BpuEI CTTGAG 1 cut(s) 1185
BpuMI CCSGG 1 cut(s) 1236
BsaHI GRCGYC 3 cut(s) 123, 172, 278
BsaJI CCNNGG 1 cut(s) 731
Bsc4I CCNNNNNNNGG 5 cut(s) 88, 89, 899, 1039, 1040
Bse118I RCCGGY 2 cut(s) 71, 125
Bse1I ACTGG 4 cut(s) 940, 1034, 1057, 1326
Bse3DI GCAATG 2 cut(s) 162, 1229
BseBI CCWGG 2 cut(s) 518, 690
BseDI CCNNGG 1 cut(s) 731
BseGI GGATG 5 cut(s) 346, 623, 727, 1053, 1124
BseLI CCNNNNNNNGG 5 cut(s) 88, 89, 899, 1039, 1040
BseMI GCAATG 2 cut(s) 162, 1229
BseMII CTCAG 2 cut(s) 575, 801
BseNI ACTGG 4 cut(s) 940, 1034, 1057, 1326
BseSI GKGCMC 2 cut(s) 1114, 1287
BseXI GCAGC 1 cut(s) 275
Bsh1236I CGCG 2 cut(s) 38, 318
Bsh1285I CGRYCG 2 cut(s) 69, 76
BshFI GGCC 3 cut(s) 102, 597, 1378
BshNI GGYRCC 2 cut(s) 122, 277
BsiEI CGRYCG 2 cut(s) 69, 76
BsiHKAI GWGCWC 2 cut(s) 534, 1114
BsiSI CCGG 3 cut(s) 72, 126, 1235
BslFI GGGAC 3 cut(s) 54, 564, 820
BslI CCNNNNNNNGG 5 cut(s) 88, 89, 899, 1039, 1040
BsmAI GTCTC 3 cut(s) 38, 789, 1162
BsmFI GGGAC 3 cut(s) 54, 564, 820
BsnI GGCC 3 cut(s) 102, 597, 1378
Bsp1286I GDGCHC 5 cut(s) 534, 944, 1053, 1114, 1287
Bsp143I GATC 2 cut(s) 284, 413
BspACI CCGC 4 cut(s) 38, 65, 160, 316
BspANI GGCC 3 cut(s) 102, 597, 1378
BspCNI CTCAG 2 cut(s) 574, 802
BspFNI CGCG 2 cut(s) 38, 318
BspLI GGNNCC 4 cut(s) 124, 164, 279, 941
BspPI GGATC 1 cut(s) 279
BspQI GCTCTTC 1 cut(s) 1354
BspT107I GGYRCC 2 cut(s) 122, 277
BsrDI GCAATG 2 cut(s) 162, 1229
BsrFI RCCGGY 2 cut(s) 71, 125
BsrI ACTGG 4 cut(s) 940, 1034, 1057, 1326
BssAI RCCGGY 2 cut(s) 71, 125
BssECI CCNNGG 1 cut(s) 731
BssMI GATC 2 cut(s) 284, 413
BssNI GRCGYC 3 cut(s) 123, 172, 278
BssSI CACGAG 3 cut(s) 272, 696, 999
Bst2BI CACGAG 3 cut(s) 272, 696, 999
Bst2UI CCWGG 2 cut(s) 518, 690
Bst6I CTCTTC 1 cut(s) 1354
BstACI GRCGYC 3 cut(s) 123, 172, 278
BstDEI CTNAG 2 cut(s) 561, 810
BstDSI CCRYGG 1 cut(s) 731
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 5 cut(s) 346, 623, 727, 1053, 1124
BstFNI CGCG 2 cut(s) 38, 318
BstH2I RGCGCY 3 cut(s) 126, 257, 281
BstHHI GCGC 3 cut(s) 125, 256, 280
BstKTI GATC 2 cut(s) 287, 416
BstMAI GTCTC 3 cut(s) 38, 789, 1162
BstMBI GATC 2 cut(s) 284, 413
BstMCI CGRYCG 2 cut(s) 69, 76
BstMWI GCNNNNNNNGC 4 cut(s) 99, 171, 260, 1331
BstNI CCWGG 2 cut(s) 518, 690
BstNSI RCATGY 2 cut(s) 150, 824
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 3 cut(s) 516, 688, 1234
BstSFI CTRYAG 1 cut(s) 717
BstSLI GKGCMC 2 cut(s) 1114, 1287
BstUI CGCG 2 cut(s) 38, 318
BstV1I GCAGC 1 cut(s) 275
BstV2I GAAGAC 1 cut(s) 1311
BstX2I RGATCY 1 cut(s) 284
BstXI CCANNNNNNTGG 1 cut(s) 738
BstYI RGATCY 1 cut(s) 284
BsuRI GGCC 3 cut(s) 102, 597, 1378
BtgI CCRYGG 1 cut(s) 731
BtgZI GCGATG 1 cut(s) 197
BtsCI GGATG 5 cut(s) 346, 623, 727, 1053, 1124
BtsIMutI CAGTG 4 cut(s) 93, 714, 1114, 1333
CfoI GCGC 3 cut(s) 125, 256, 280
Cfr10I RCCGGY 2 cut(s) 71, 125
Cfr13I GGNCC 1 cut(s) 692
CseI GACGC 2 cut(s) 180, 307
Csp6I GTAC 3 cut(s) 129, 144, 358
CviAII CATG 6 cut(s) 147, 678, 738, 760, 791, 821
CviQI GTAC 3 cut(s) 129, 144, 358
DdeI CTNAG 2 cut(s) 561, 810
DinI GGCGCC 2 cut(s) 124, 279
DpnI GATC 2 cut(s) 286, 415
DpnII GATC 2 cut(s) 284, 413
DraI TTTAAA 1 cut(s) 591
EaeI YGGCCR 1 cut(s) 595
Eam1104I CTCTTC 1 cut(s) 1354
EarI CTCTTC 1 cut(s) 1354
Eco24I GRGCYC 2 cut(s) 944, 1053
Eco47I GGWCC 1 cut(s) 692
Eco91I GGTNACC 1 cut(s) 4
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 2 cut(s) 516, 688
EcoT22I ATGCAT 2 cut(s) 623, 1231
EcoT38I GRGCYC 2 cut(s) 944, 1053
EgeI GGCGCC 2 cut(s) 124, 279
EheI GGCGCC 2 cut(s) 124, 279
FaeI CATG 6 cut(s) 150, 681, 741, 763, 794, 824
FaqI GGGAC 3 cut(s) 54, 564, 820
FatI CATG 6 cut(s) 146, 677, 737, 759, 790, 820
FauI CCCGC 1 cut(s) 31
FauNDI CATATG 2 cut(s) 575, 1012
Fnu4HI GCNGC 2 cut(s) 264, 316
FokI GGATG 5 cut(s) 333, 630, 714, 1040, 1131
FriOI GRGCYC 2 cut(s) 944, 1053
Fsp4HI GCNGC 2 cut(s) 264, 316
FspBI CTAG 4 cut(s) 119, 312, 668, 1359
GlaI GCGC 3 cut(s) 124, 255, 279
GluI GCNGC 2 cut(s) 264, 316
GsuI CTGGAG 1 cut(s) 926
HaeII RGCGCY 3 cut(s) 126, 257, 281
HaeIII GGCC 3 cut(s) 102, 597, 1378
HapII CCGG 3 cut(s) 72, 126, 1235
HgaI GACGC 2 cut(s) 180, 307
HhaI GCGC 3 cut(s) 125, 256, 280
Hin1I GRCGYC 3 cut(s) 123, 172, 278
Hin1II CATG 6 cut(s) 150, 681, 741, 763, 794, 824
Hin6I GCGC 3 cut(s) 123, 254, 278
HinP1I GCGC 3 cut(s) 123, 254, 278
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HinfI GANTC 5 cut(s) 55, 371, 641, 763, 1198
HpaII CCGG 3 cut(s) 72, 126, 1235
HphI GGTGA 3 cut(s) 16, 779, 951
Hpy166II GTNNAC 5 cut(s) 131, 487, 568, 611, 1112
Hpy188I TCNGA 1 cut(s) 376
Hpy188III TCNNGA 5 cut(s) 477, 662, 905, 927, 1001
Hpy8I GTNNAC 5 cut(s) 131, 487, 568, 611, 1112
Hpy99I CGWCG 4 cut(s) 174, 323, 326, 365
HpyAV CCTTC 2 cut(s) 113, 361
HpyCH4IV ACGT 1 cut(s) 483
HpyF10VI GCNNNNNNNGC 4 cut(s) 99, 171, 260, 1331
HpyF3I CTNAG 2 cut(s) 561, 810
HpySE526I ACGT 1 cut(s) 483
Hsp92I GRCGYC 3 cut(s) 123, 172, 278
Hsp92II CATG 6 cut(s) 150, 681, 741, 763, 794, 824
HspAI GCGC 3 cut(s) 123, 254, 278
KasI GGCGCC 2 cut(s) 122, 277
Kzo9I GATC 2 cut(s) 284, 413
LguI GCTCTTC 1 cut(s) 1354
LmnI GCTCC 3 cut(s) 162, 929, 939
Lsp1109I GCAGC 1 cut(s) 275
LweI GCATC 3 cut(s) 608, 630, 1216
MaeI CTAG 4 cut(s) 119, 312, 668, 1359
MaeII ACGT 1 cut(s) 483
MaeIII GTNAC 6 cut(s) 4, 631, 823, 957, 1043, 1274
MalI GATC 2 cut(s) 286, 415
MboI GATC 2 cut(s) 284, 413
MfeI CAATTG 3 cut(s) 289, 767, 843
MflI RGATCY 1 cut(s) 284
MhlI GDGCHC 5 cut(s) 534, 944, 1053, 1114, 1287
MlsI TGGCCA 1 cut(s) 597
MluCI AATT 8 cut(s) 28, 289, 523, 545, 767, 843, 1245, 1401
MluNI TGGCCA 1 cut(s) 597
Mly113I GGCGCC 2 cut(s) 123, 278
MlyI GAGTC 4 cut(s) 365, 650, 757, 1192
MmeI TCCRAC 2 cut(s) 317, 399
MnlI CCTC 7 cut(s) 277, 901, 954, 1033, 1175, 1274, 1345
Mox20I TGGCCA 1 cut(s) 597
Mph1103I ATGCAT 2 cut(s) 623, 1231
MscI TGGCCA 1 cut(s) 597
MseI TTAA 7 cut(s) 590, 705, 882, 912, 971, 1020, 1311
MslI CAYNNNNRTG 3 cut(s) 537, 736, 1117
Msp20I TGGCCA 1 cut(s) 597
MspA1I CMGCKG 1 cut(s) 65
MspI CCGG 3 cut(s) 72, 126, 1235
MspR9I CCNGG 3 cut(s) 518, 690, 1236
MunI CAATTG 3 cut(s) 289, 767, 843
MvaI CCWGG 2 cut(s) 518, 690
MvnI CGCG 2 cut(s) 38, 318
MwoI GCNNNNNNNGC 4 cut(s) 99, 171, 260, 1331
NarI GGCGCC 2 cut(s) 123, 278
NciI CCSGG 1 cut(s) 1236
NdeI CATATG 2 cut(s) 575, 1012
NdeII GATC 2 cut(s) 284, 413
NlaIII CATG 6 cut(s) 150, 681, 741, 763, 794, 824
NlaIV GGNNCC 4 cut(s) 124, 164, 279, 941
NmeAIII GCCGAG 1 cut(s) 306
NmuCI GTSAC 4 cut(s) 4, 631, 957, 1274
NsiI ATGCAT 2 cut(s) 623, 1231
NspI RCATGY 2 cut(s) 150, 824
PciI ACATGT 1 cut(s) 820
PciSI GCTCTTC 1 cut(s) 1354
PfeI GAWTC 1 cut(s) 55
PflMI CCANNNNNTGG 1 cut(s) 899
PkrI GCNGC 2 cut(s) 265, 317
PleI GAGTC 4 cut(s) 365, 649, 757, 1192
PluTI GGCGCC 2 cut(s) 126, 281
PpsI GAGTC 4 cut(s) 365, 649, 757, 1192
PscI ACATGT 1 cut(s) 820
PsiI TTATAA 1 cut(s) 507
Psp6I CCWGG 2 cut(s) 516, 688
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 516, 688
PspN4I GGNNCC 4 cut(s) 124, 164, 279, 941
PspPI GGNCC 1 cut(s) 692
PsuI RGATCY 1 cut(s) 284
RsaI GTAC 3 cut(s) 130, 145, 359
RsaNI GTAC 3 cut(s) 129, 144, 358
RseI CAYNNNNRTG 3 cut(s) 537, 736, 1117
SapI GCTCTTC 1 cut(s) 1354
SaqAI TTAA 7 cut(s) 590, 705, 882, 912, 971, 1020, 1311
SatI GCNGC 2 cut(s) 264, 316
Sau3AI GATC 2 cut(s) 284, 413
Sau96I GGNCC 1 cut(s) 692
SchI GAGTC 4 cut(s) 365, 650, 757, 1192
ScrFI CCNGG 3 cut(s) 518, 690, 1236
SduI GDGCHC 5 cut(s) 534, 944, 1053, 1114, 1287
SfaNI GCATC 3 cut(s) 608, 630, 1216
SfcI CTRYAG 1 cut(s) 717
SfoI GGCGCC 2 cut(s) 124, 279
SinI GGWCC 1 cut(s) 692
SmiMI CAYNNNNRTG 3 cut(s) 537, 736, 1117
SmlI CTYRAG 1 cut(s) 1200
SmoI CTYRAG 1 cut(s) 1200
Sse9I AATT 8 cut(s) 28, 289, 523, 545, 767, 843, 1245, 1401
SsiI CCGC 4 cut(s) 38, 65, 160, 316
SspDI GGCGCC 2 cut(s) 122, 277
SspMI CTAG 4 cut(s) 119, 312, 668, 1359
StyD4I CCNGG 3 cut(s) 516, 688, 1234
TaiI ACGT 1 cut(s) 486
TaqI TCGA 8 cut(s) 303, 324, 388, 442, 644, 663, 857, 1163
TasI AATT 8 cut(s) 28, 289, 523, 545, 767, 843, 1245, 1401
TatI WGTACW 1 cut(s) 143
TauI GCSGC 1 cut(s) 318
TfiI GAWTC 1 cut(s) 55
Tru1I TTAA 7 cut(s) 590, 705, 882, 912, 971, 1020, 1311
Tru9I TTAA 7 cut(s) 590, 705, 882, 912, 971, 1020, 1311
TscAI CASTG 4 cut(s) 93, 721, 1114, 1333
TseFI GTSAC 4 cut(s) 4, 631, 957, 1274
TseI GCWGC 1 cut(s) 263
Tsp45I GTSAC 4 cut(s) 4, 631, 957, 1274
TspDTI ATGAA 4 cut(s) 39, 176, 792, 1029
TspGWI ACGGA 2 cut(s) 339, 1293
TspRI CASTG 4 cut(s) 93, 721, 1114, 1333
Van91I CCANNNNNTGG 1 cut(s) 899
VneI GTGCAC 1 cut(s) 1110
VpaK11BI GGWCC 1 cut(s) 692
XceI RCATGY 2 cut(s) 150, 824
XcmI CCANNNNNNNNNTGG 1 cut(s) 605
XspI CTAG 4 cut(s) 119, 312, 668, 1359
Zsp2I ATGCAT 2 cut(s) 623, 1231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.