Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007083

Physical Location & Seq

Genomic Coordinates Reverse (-)

17120010 .. 17121941

Gene Structure 1932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G168100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGGAGACCCCATCTTCAATCAGAAGAGTCACAAGGTCTCAGGCTTTGGTTGCTCAAAACAGCAACACCAACAACATTCCCCTTTCAAGGAAGAATGAAGATTCTGAAAAGGTTGAATCGAAATCAAGACCAAGAAATGGGAAGCAACAGCAAGACAGATCAGCCCTGATTGATATAACCAATGATTCTCCGATTGTGGGGCTTGCAATGGGAAGCTTGGAGACCCCATCATCGGCCATAGTCAAACAGAGAAGCTTTAGAGCCAAGAACACACCTGGGTCCGGAGAGGCCTTGCTGAGGGGTCAAGTCAAGACCCTCTTGCAACAAGTGGAGGAAGAGGCCGAGCTCTCAAAGATCACATTGGAAAGCCGCCCTCTTCGTCTTCTCCAAGGAATTACTGGTAACTCGCCAATGGGACTACTTGCCCCAACTCCGGCAAACACACCACAGGTCTCTGATCTCTCTGTTGATGCAAGTGGAAGCAACAATGGTGGTGTGGGTTTCGAGAAGCCTTCTCCACTTATCCAAGAACAATTGATTTCTCAGGTAGTATGTGACATCTTTGAGGGAAAGAATCAAGAAAGCCTTGAATCACAAAAGAGTATCATCAGCCGGTCTCTGCTGCTGGATTTCTCTGAGAAATCTGAAGTCTCCTCTGTTTCATCAGAGTGCTCCTCTGTGATTACTGAAATCAAAGAGAAGTCATCACCAGATGATGATAGTGCTTCCATTTGGTCAATTCAGGTCAATGCTAGCACCCATGATGAAGATGAAGAAGAAGTTGCTCAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTATTATCTGAATCTGAATGAAGGTTATGAAATTGAAGAACATGAACAGGATGGAGGCTATGATCTTGATGAGCTTTGTGATGGTATAAACAACATTTGTGTTGATGAGAAGAAAATGATCCCCAAGTTTGCTGGAAAGCATACAAGATTTGTGTATGACAGTGAGGATGACATTGAAATCGTTGAAGAAGACTTTTCAGCAGAGAGTCCTGATTCAGGTGCTGTTGTTTCACCCAGTGCCCTTCGCTTGAAGGGCTTGCCAACACCAAAAGGCAAGCACATGCGCTTTCTTGAGGAGGAAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

378

Amino Acids

41.48

Weight (kDa)

4.41

Isoelectric Point (pI)

69.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007083)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51230 AT5G66230 AT5G66230
malus_domestica	MD02G1132500.v1.1 MD15G1246000.v1.1
prunus_persica	Prupe.7G168100_v2.0.a1
pyrus_communis	pycom02g10400 pycom15g21610
rosa_chinensis	RchiOBHm_Chr2g0099451 RchiOBHm_Chr6g0272671
rosa_laevigata	RLG00000004887 RLG00000016883
rosa_multiflora	Rmu_sc0002542.1_g000003 Rmu_sc0004888.1_g000020
rosa_roxburghii	Rroxscaffold_2G00143070
rosa_rugosa	Rorug02G0079600
rosa_samantha	Rh2AG129600 Rh2BG132700 Rh2CG133400 Rh2DG133700 Rh6AG170300 Rh6CG169700 Rh6DG179800
rosa_wichuraiana	Rw2G009980 Rw5G024610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	137
AccIII	TCCGGA	1 cut(s)	281
AciI	CCGC	1 cut(s)	370
AclWI	GGATC	1 cut(s)	940
AcoI	YGGCCR	1 cut(s)	234
AcuI	CTGAAG	1 cut(s)	666
AdeI	CACNNNGTG	1 cut(s)	1064
AfiI	CCNNNNNNNGG	8 cut(s)	87, 137, 197, 232, 281, 297, 433, 1043
AgsI	TTSAA	8 cut(s)	18, 87, 116, 590, 863, 1004, 1013, 1078
AjnI	CCWGG	1 cut(s)	274
AluBI	AGCT	4 cut(s)	216, 255, 346, 901
AluI	AGCT	4 cut(s)	216, 255, 346, 901
Alw21I	GWGCWC	2 cut(s)	348, 674
Alw26I	GTCTC	5 cut(s)	42, 215, 457, 621, 655
AlwI	GGATC	1 cut(s)	940
AlwNI	CAGNNNCTG	1 cut(s)	1049
Aor13HI	TCCGGA	1 cut(s)	281
AoxI	GGCC	3 cut(s)	234, 288, 339
ApeKI	GCWGC	1 cut(s)	622
AspLEI	GCGC	1 cut(s)	1113
AspS9I	GGNCC	1 cut(s)	279
AsuHPI	GGTGA	2 cut(s)	699, 1050
AsuNHI	GCTAGC	1 cut(s)	752
AvaII	GGWCC	1 cut(s)	279
BaeGI	GKGCMC	1 cut(s)	1069
BanII	GRGCYC	1 cut(s)	348
BbsI	GAAGAC	2 cut(s)	374, 1023
Bbv12I	GWGCWC	2 cut(s)	348, 674
BbvCI	CCTCAGC	1 cut(s)	296
BbvI	GCAGC	1 cut(s)	609
BccI	CCATC	4 cut(s)	19, 235, 872, 902
BciT130I	CCWGG	1 cut(s)	276
BcoDI	GTCTC	5 cut(s)	42, 215, 457, 621, 655
BfaI	CTAG	1 cut(s)	753
BisI	GCNGC	2 cut(s)	370, 623
BlsI	GCNGC	2 cut(s)	371, 624
Bme1390I	CCNGG	1 cut(s)	276
Bme18I	GGWCC	1 cut(s)	279
BmgT120I	GGNCC	1 cut(s)	279
BmiI	GGNNCC	1 cut(s)	280
BmrFI	CCNGG	1 cut(s)	276
BmrI	ACTGGG	1 cut(s)	1056
BmsI	GCATC	1 cut(s)	460
BmtI	GCTAGC	1 cut(s)	756
BmuI	ACTGGG	1 cut(s)	1056
BpiI	GAAGAC	2 cut(s)	374, 1023
BplI	GAGNNNNNCTC	2 cut(s)	659, 691
Bpu10I	CCTNAGC	1 cut(s)	296
BpuEI	CTTGAG	1 cut(s)	771
BsaBI	GATNNNNATC	1 cut(s)	831
BsaI	GGTCTC	4 cut(s)	42, 215, 457, 621
BsaJI	CCNNGG	2 cut(s)	275, 388
BsaWI	WCCGGW	1 cut(s)	281
Bsc4I	CCNNNNNNNGG	8 cut(s)	87, 137, 197, 232, 281, 297, 433, 1043
Bse118I	RCCGGY	1 cut(s)	612
Bse1I	ACTGG	2 cut(s)	403, 1062
Bse3DI	GCAATG	1 cut(s)	213
Bse8I	GATNNNNATC	1 cut(s)	831
BseAI	TCCGGA	1 cut(s)	281
BseBI	CCWGG	1 cut(s)	276
BseDI	CCNNGG	2 cut(s)	275, 388
BseGI	GGATG	2 cut(s)	883, 1000
BseJI	GATNNNNATC	1 cut(s)	831
BseLI	CCNNNNNNNGG	8 cut(s)	87, 137, 197, 232, 281, 297, 433, 1043
BseMI	GCAATG	1 cut(s)	213
BseMII	CTCAG	4 cut(s)	53, 287, 557, 627
BseNI	ACTGG	2 cut(s)	403, 1062
BseRI	GAGGAG	2 cut(s)	643, 664
BseSI	GKGCMC	1 cut(s)	1069
BseXI	GCAGC	1 cut(s)	609
BshFI	GGCC	3 cut(s)	236, 290, 341
BsiHKAI	GWGCWC	2 cut(s)	348, 674
BsiSI	CCGG	3 cut(s)	282, 434, 613
BslFI	GGGAC	1 cut(s)	429
BslI	CCNNNNNNNGG	8 cut(s)	87, 137, 197, 232, 281, 297, 433, 1043
BsmAI	GTCTC	5 cut(s)	42, 215, 457, 621, 655
BsmFI	GGGAC	1 cut(s)	429
BsnI	GGCC	3 cut(s)	236, 290, 341
Bso31I	GGTCTC	4 cut(s)	42, 215, 457, 621
Bsp1286I	GDGCHC	3 cut(s)	348, 674, 1069
Bsp13I	TCCGGA	1 cut(s)	281
Bsp143I	GATC	5 cut(s)	158, 354, 457, 889, 945
BspACI	CCGC	1 cut(s)	370
BspANI	GGCC	3 cut(s)	236, 290, 341
BspCNI	CTCAG	4 cut(s)	52, 288, 556, 628
BspEI	TCCGGA	1 cut(s)	281
BspLI	GGNNCC	1 cut(s)	280
BspOI	GCTAGC	1 cut(s)	756
BspPI	GGATC	1 cut(s)	940
BspTNI	GGTCTC	4 cut(s)	42, 215, 457, 621
BsrDI	GCAATG	1 cut(s)	213
BsrFI	RCCGGY	1 cut(s)	612
BsrI	ACTGG	2 cut(s)	403, 1062
BssAI	RCCGGY	1 cut(s)	612
BssECI	CCNNGG	2 cut(s)	275, 388
BssMI	GATC	5 cut(s)	158, 354, 457, 889, 945
BssT1I	CCWWGG	1 cut(s)	388
Bst2UI	CCWGG	1 cut(s)	276
Bst4CI	ACNGT	1 cut(s)	989
Bst6I	CTCTTC	3 cut(s)	19, 330, 381
BstC8I	GCNNGC	4 cut(s)	204, 754, 1085, 1103
BstDEI	CTNAG	4 cut(s)	39, 296, 543, 636
BstENI	CCTNNNNNAGG	2 cut(s)	295, 1041
BstF5I	GGATG	2 cut(s)	883, 1000
BstHHI	GCGC	1 cut(s)	1113
BstKTI	GATC	5 cut(s)	161, 357, 460, 892, 948
BstMAI	GTCTC	5 cut(s)	42, 215, 457, 621, 655
BstMBI	GATC	5 cut(s)	158, 354, 457, 889, 945
BstMWI	GCNNNNNNNGC	2 cut(s)	50, 1080
BstNI	CCWGG	1 cut(s)	276
BstNSI	RCATGY	1 cut(s)	1111
BstSCI	CCNGG	1 cut(s)	274
BstSLI	GKGCMC	1 cut(s)	1069
BstV1I	GCAGC	1 cut(s)	609
BstV2I	GAAGAC	2 cut(s)	374, 1023
BsuRI	GGCC	3 cut(s)	236, 290, 341
BtsCI	GGATG	2 cut(s)	883, 1000
BtsIMutI	CAGTG	2 cut(s)	994, 1069
Cac8I	GCNNGC	4 cut(s)	204, 754, 1085, 1103
CaiI	CAGNNNCTG	1 cut(s)	1049
CfoI	GCGC	1 cut(s)	1113
Cfr10I	RCCGGY	1 cut(s)	612
Cfr13I	GGNCC	1 cut(s)	279
CspCI	CAANNNNNGTGG	2 cut(s)	472, 507
CviAII	CATG	3 cut(s)	761, 869, 1108
DdeI	CTNAG	4 cut(s)	39, 296, 543, 636
DpnI	GATC	5 cut(s)	160, 356, 459, 891, 947
DpnII	GATC	5 cut(s)	158, 354, 457, 889, 945
DraIII	CACNNNGTG	1 cut(s)	1064
EaeI	YGGCCR	1 cut(s)	234
Eam1104I	CTCTTC	3 cut(s)	19, 330, 381
EarI	CTCTTC	3 cut(s)	19, 330, 381
Ecl136II	GAGCTC	1 cut(s)	346
Eco130I	CCWWGG	1 cut(s)	388
Eco147I	AGGCCT	1 cut(s)	290
Eco24I	GRGCYC	1 cut(s)	348
Eco31I	GGTCTC	4 cut(s)	42, 215, 457, 621
Eco47I	GGWCC	1 cut(s)	279
Eco53kI	GAGCTC	1 cut(s)	346
Eco57I	CTGAAG	1 cut(s)	666
EcoICRI	GAGCTC	1 cut(s)	346
EcoNI	CCTNNNNNAGG	2 cut(s)	295, 1041
EcoRII	CCWGG	1 cut(s)	274
EcoT14I	CCWWGG	1 cut(s)	388
EcoT38I	GRGCYC	1 cut(s)	348
ErhI	CCWWGG	1 cut(s)	388
FaeI	CATG	3 cut(s)	764, 872, 1111
FalI	AAGNNNNNCTT	4 cut(s)	302, 334, 570, 602
FaqI	GGGAC	1 cut(s)	429
FatI	CATG	3 cut(s)	760, 868, 1107
Fnu4HI	GCNGC	2 cut(s)	370, 623
FokI	GGATG	2 cut(s)	890, 1007
FriOI	GRGCYC	1 cut(s)	348
Fsp4HI	GCNGC	2 cut(s)	370, 623
FspBI	CTAG	1 cut(s)	753
GlaI	GCGC	1 cut(s)	1112
GluI	GCNGC	2 cut(s)	370, 623
HaeIII	GGCC	3 cut(s)	236, 290, 341
HapII	CCGG	3 cut(s)	282, 434, 613
HhaI	GCGC	1 cut(s)	1113
Hin1II	CATG	3 cut(s)	764, 872, 1111
Hin6I	GCGC	1 cut(s)	1111
HinP1I	GCGC	1 cut(s)	1111
HindIII	AAGCTT	2 cut(s)	214, 253
HinfI	GANTC	9 cut(s)	27, 101, 116, 185, 574, 590, 838, 1033, 1040
HpaII	CCGG	3 cut(s)	282, 434, 613
HphI	GGTGA	2 cut(s)	699, 1050
Hpy188I	TCNGA	9 cut(s)	23, 106, 192, 457, 637, 646, 667, 837, 843
Hpy188III	TCNNGA	8 cut(s)	126, 282, 310, 505, 578, 893, 1037, 1118
HpyAV	CCTTC	4 cut(s)	522, 842, 1072, 1079
HpyCH4III	ACNGT	1 cut(s)	989
HpyCH4V	TGCA	3 cut(s)	206, 322, 473
HpyF10VI	GCNNNNNNNGC	2 cut(s)	50, 1080
HpyF3I	CTNAG	4 cut(s)	39, 296, 543, 636
Hsp92II	CATG	3 cut(s)	764, 872, 1111
HspAI	GCGC	1 cut(s)	1111
Kpn2I	TCCGGA	1 cut(s)	281
Kzo9I	GATC	5 cut(s)	158, 354, 457, 889, 945
LmnI	GCTCC	1 cut(s)	677
Lsp1109I	GCAGC	1 cut(s)	609
LweI	GCATC	1 cut(s)	460
MaeI	CTAG	1 cut(s)	753
MaeIII	GTNAC	3 cut(s)	28, 401, 554
MalI	GATC	5 cut(s)	160, 356, 459, 891, 947
MboI	GATC	5 cut(s)	158, 354, 457, 889, 945
MfeI	CAATTG	1 cut(s)	533
MhlI	GDGCHC	3 cut(s)	348, 674, 1069
MluCI	AATT	5 cut(s)	393, 533, 738, 858, 1129
MlyI	GAGTC	2 cut(s)	36, 1042
MroI	TCCGGA	1 cut(s)	281
MseI	TTAA	1 cut(s)	1132
MslI	CAYNNNNRTG	1 cut(s)	667
MspI	CCGG	3 cut(s)	282, 434, 613
MspR9I	CCNGG	1 cut(s)	276
MunI	CAATTG	1 cut(s)	533
MvaI	CCWGG	1 cut(s)	276
MwoI	GCNNNNNNNGC	2 cut(s)	50, 1080
NdeII	GATC	5 cut(s)	158, 354, 457, 889, 945
NheI	GCTAGC	1 cut(s)	752
NlaIII	CATG	3 cut(s)	764, 872, 1111
NlaIV	GGNNCC	1 cut(s)	280
NmeAIII	GCCGAG	1 cut(s)	367
NmuCI	GTSAC	2 cut(s)	28, 554
NspI	RCATGY	1 cut(s)	1111
PceI	AGGCCT	1 cut(s)	290
PfeI	GAWTC	7 cut(s)	101, 116, 185, 574, 590, 838, 1040
PflMI	CCANNNNNTGG	1 cut(s)	137
PkrI	GCNGC	2 cut(s)	371, 624
PleI	GAGTC	2 cut(s)	35, 1041
PpsI	GAGTC	2 cut(s)	35, 1041
Psp124BI	GAGCTC	1 cut(s)	348
Psp6I	CCWGG	1 cut(s)	274
PspGI	CCWGG	1 cut(s)	274
PspN4I	GGNNCC	1 cut(s)	280
PspPI	GGNCC	1 cut(s)	279
PstNI	CAGNNNCTG	1 cut(s)	1049
RseI	CAYNNNNRTG	1 cut(s)	667
SacI	GAGCTC	1 cut(s)	348
SaqAI	TTAA	1 cut(s)	1132
SatI	GCNGC	2 cut(s)	370, 623
Sau3AI	GATC	5 cut(s)	158, 354, 457, 889, 945
Sau96I	GGNCC	1 cut(s)	279
SchI	GAGTC	2 cut(s)	36, 1042
ScrFI	CCNGG	1 cut(s)	276
SduI	GDGCHC	3 cut(s)	348, 674, 1069
SfaNI	GCATC	1 cut(s)	460
SinI	GGWCC	1 cut(s)	279
SmiMI	CAYNNNNRTG	1 cut(s)	667
SmlI	CTYRAG	2 cut(s)	786, 1118
SmoI	CTYRAG	2 cut(s)	786, 1118
Sse9I	AATT	5 cut(s)	393, 533, 738, 858, 1129
SseBI	AGGCCT	1 cut(s)	290
SsiI	CCGC	1 cut(s)	370
SspMI	CTAG	1 cut(s)	753
SstI	GAGCTC	1 cut(s)	348
StuI	AGGCCT	1 cut(s)	290
StyD4I	CCNGG	1 cut(s)	274
StyI	CCWWGG	1 cut(s)	388
TaaI	ACNGT	1 cut(s)	989
TaqI	TCGA	2 cut(s)	119, 504
TasI	AATT	5 cut(s)	393, 533, 738, 858, 1129
TauI	GCSGC	1 cut(s)	372
TfiI	GAWTC	7 cut(s)	101, 116, 185, 574, 590, 838, 1040
Tru1I	TTAA	1 cut(s)	1132
Tru9I	TTAA	1 cut(s)	1132
TscAI	CASTG	2 cut(s)	994, 1069
TseFI	GTSAC	2 cut(s)	28, 554
TseI	GCWGC	1 cut(s)	622
Tsp45I	GTSAC	2 cut(s)	28, 554
TspDTI	ATGAA	7 cut(s)	111, 651, 780, 786, 861, 870, 885
TspRI	CASTG	2 cut(s)	994, 1069
Van91I	CCANNNNNTGG	1 cut(s)	137
VpaK11BI	GGWCC	1 cut(s)	279
XagI	CCTNNNNNAGG	2 cut(s)	295, 1041
XceI	RCATGY	1 cut(s)	1111
XcmI	CCANNNNNNNNNTGG	1 cut(s)	395
XspI	CTAG	1 cut(s)	753

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.