No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G51230 AT5G66230 AT5G66230 |
| malus_domestica | MD02G1132500.v1.1 MD15G1246000.v1.1 |
| prunus_persica | Prupe.7G168100_v2.0.a1 |
| pyrus_communis | pycom02g10400 pycom15g21610 |
| rosa_chinensis | RchiOBHm_Chr2g0099451 RchiOBHm_Chr6g0272671 |
| rosa_laevigata | RLG00000004887 RLG00000016883 |
| rosa_multiflora | Rmu_sc0002542.1_g000003 Rmu_sc0004888.1_g000020 |
| rosa_roxburghii | Rroxscaffold_2G00143070 |
| rosa_rugosa | Rorug02G0079600 |
| rosa_samantha | Rh2AG129600 Rh2BG132700 Rh2CG133400 Rh2DG133700 Rh6AG170300 Rh6CG169700 Rh6DG179800 |
| rosa_wichuraiana | Rw2G009980 Rw5G024610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 300 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 230 |
| AgsI | TTSAA | 1 cut(s) | 269 |
| AjnI | CCWGG | 1 cut(s) | 126 |
| AluBI | AGCT | 2 cut(s) | 76, 162 |
| AluI | AGCT | 2 cut(s) | 76, 162 |
| AoxI | GGCC | 2 cut(s) | 3, 143 |
| ApeKI | GCWGC | 2 cut(s) | 73, 167 |
| BbvI | GCAGC | 2 cut(s) | 85, 154 |
| BccI | CCATC | 1 cut(s) | 101 |
| BciT130I | CCWGG | 1 cut(s) | 128 |
| BfaI | CTAG | 1 cut(s) | 84 |
| BisI | GCNGC | 2 cut(s) | 74, 168 |
| BlsI | GCNGC | 2 cut(s) | 75, 169 |
| Bme1390I | CCNGG | 1 cut(s) | 128 |
| BmiI | GGNNCC | 1 cut(s) | 235 |
| BmrFI | CCNGG | 1 cut(s) | 128 |
| BmrI | ACTGGG | 1 cut(s) | 219 |
| BmsI | GCATC | 2 cut(s) | 140, 184 |
| BmuI | ACTGGG | 1 cut(s) | 219 |
| BsaJI | CCNNGG | 1 cut(s) | 126 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 230 |
| Bse1I | ACTGG | 1 cut(s) | 225 |
| BseBI | CCWGG | 1 cut(s) | 128 |
| BseDI | CCNNGG | 1 cut(s) | 126 |
| BseGI | GGATG | 2 cut(s) | 175, 189 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BseNI | ACTGG | 1 cut(s) | 225 |
| BseXI | GCAGC | 2 cut(s) | 85, 154 |
| BshFI | GGCC | 2 cut(s) | 5, 145 |
| BsiSI | CCGG | 1 cut(s) | 237 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 230 |
| BsnI | GGCC | 2 cut(s) | 5, 145 |
| BspANI | GGCC | 2 cut(s) | 5, 145 |
| BspLI | GGNNCC | 1 cut(s) | 235 |
| BsrI | ACTGG | 1 cut(s) | 225 |
| BssECI | CCNNGG | 1 cut(s) | 126 |
| Bst2UI | CCWGG | 1 cut(s) | 128 |
| BstC8I | GCNNGC | 1 cut(s) | 160 |
| BstF5I | GGATG | 2 cut(s) | 175, 189 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 164 |
| BstNI | CCWGG | 1 cut(s) | 128 |
| BstSCI | CCNGG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 2 cut(s) | 85, 154 |
| BsuRI | GGCC | 2 cut(s) | 5, 145 |
| BtsCI | GGATG | 2 cut(s) | 175, 189 |
| BtsIMutI | CAGTG | 1 cut(s) | 321 |
| Cac8I | GCNNGC | 1 cut(s) | 160 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 36, 71 |
| CviAII | CATG | 1 cut(s) | 172 |
| CviJI | RGCY | 7 cut(s) | 5, 10, 76, 145, 162, 234, 286 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 10, 76, 145, 162, 234, 286 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EcoRII | CCWGG | 1 cut(s) | 126 |
| EcoT22I | ATGCAT | 1 cut(s) | 177 |
| FaeI | CATG | 1 cut(s) | 175 |
| FaiI | YATR | 5 cut(s) | 102, 173, 206, 230, 273 |
| FatI | CATG | 1 cut(s) | 171 |
| FblI | GTMKAC | 1 cut(s) | 300 |
| Fnu4HI | GCNGC | 2 cut(s) | 74, 168 |
| FokI | GGATG | 2 cut(s) | 162, 176 |
| Fsp4HI | GCNGC | 2 cut(s) | 74, 168 |
| FspBI | CTAG | 1 cut(s) | 84 |
| GluI | GCNGC | 2 cut(s) | 74, 168 |
| HaeIII | GGCC | 2 cut(s) | 5, 145 |
| HapII | CCGG | 1 cut(s) | 237 |
| Hin1II | CATG | 1 cut(s) | 175 |
| HincII | GTYRAC | 1 cut(s) | 115 |
| HindII | GTYRAC | 1 cut(s) | 115 |
| HpaII | CCGG | 1 cut(s) | 237 |
| Hpy166II | GTNNAC | 2 cut(s) | 115, 301 |
| Hpy188III | TCNNGA | 4 cut(s) | 17, 68, 84, 293 |
| Hpy8I | GTNNAC | 2 cut(s) | 115, 301 |
| HpyAV | CCTTC | 1 cut(s) | 191 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 2 cut(s) | 175, 264 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 164 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| Hsp92II | CATG | 1 cut(s) | 175 |
| LmnI | GCTCC | 1 cut(s) | 239 |
| LpnPI | CCDG | 5 cut(s) | 113, 140, 238, 250, 309 |
| Lsp1109I | GCAGC | 2 cut(s) | 85, 154 |
| LweI | GCATC | 2 cut(s) | 140, 184 |
| MaeI | CTAG | 1 cut(s) | 84 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 1 cut(s) | 248 |
| MboII | GAAGA | 2 cut(s) | 43, 114 |
| MluCI | AATT | 1 cut(s) | 12 |
| MnlI | CCTC | 1 cut(s) | 103 |
| Mph1103I | ATGCAT | 1 cut(s) | 177 |
| MslI | CAYNNNNRTG | 1 cut(s) | 139 |
| MspI | CCGG | 1 cut(s) | 237 |
| MspR9I | CCNGG | 1 cut(s) | 128 |
| MvaI | CCWGG | 1 cut(s) | 128 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 164 |
| NlaIII | CATG | 1 cut(s) | 175 |
| NlaIV | GGNNCC | 1 cut(s) | 235 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NsiI | ATGCAT | 1 cut(s) | 177 |
| PkrI | GCNGC | 2 cut(s) | 75, 169 |
| Psp6I | CCWGG | 1 cut(s) | 126 |
| PspGI | CCWGG | 1 cut(s) | 126 |
| PspN4I | GGNNCC | 1 cut(s) | 235 |
| RseI | CAYNNNNRTG | 1 cut(s) | 139 |
| SatI | GCNGC | 2 cut(s) | 74, 168 |
| ScrFI | CCNGG | 1 cut(s) | 128 |
| SetI | ASST | 4 cut(s) | 78, 114, 164, 306 |
| SfaNI | GCATC | 2 cut(s) | 140, 184 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 139 |
| Sse9I | AATT | 1 cut(s) | 12 |
| SspMI | CTAG | 1 cut(s) | 84 |
| StyD4I | CCNGG | 1 cut(s) | 126 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TaqI | TCGA | 1 cut(s) | 292 |
| TasI | AATT | 1 cut(s) | 12 |
| TseI | GCWGC | 2 cut(s) | 73, 167 |
| TspDTI | ATGAA | 4 cut(s) | 36, 56, 173, 178 |
| XbaI | TCTAGA | 1 cut(s) | 83 |
| XmiI | GTMKAC | 1 cut(s) | 300 |
| XspI | CTAG | 1 cut(s) | 84 |
| Zsp2I | ATGCAT | 1 cut(s) | 177 |