Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007911

Physical Location & Seq

Genomic Coordinates Forward (+)

17484518 .. 17487654

Gene Structure 3137 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G175700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGATCGGAGCTCAATTTCATGTGACGGATCGCTCAGCTGCCATCCGTTCGATCCCAAGCACTTGGCCTGCTGCTAGTTCTGCTTCTTCCTCCTCGCTCCACTCGGTCTTCACGGTTCGATTAGGTTTCAGAACGACAGAACGGTGTCGTGGCCTCAAATCGATCGCCATTAGCTGCAACAACTCTTCCTCTCGTTCCAGATCCAGGAATGCCGATCACCACGATTACGATTATCTCCAAGCTTCTCTCCTCCTCTCAGAAACTATATCTCACTACCGTATGCAAAAGCGAGGGTTTAAAGAAGAGACGAAATGGCAGTCCTCTGGTAAATTGCGTCCCTTTTCAGCTCAAGCAAACCGATCTCGAAACCTCTTTGATACCTTAGGCCGAAACTTTCTCCAGCGTTTCCAAAATCCCACGATTTTTCTCAAGATTTCTTGTGATGGAGACTTTTTGCTTCCAATTGTTGTAGGTGAATTTGCCATAGAAAATCTCATCGATGCCCAATGGGGAGATGAGAATGGGGACTCCCCTGATCAATTCCAGTTTGTGAGTAATCTCGTCGGCAAACTTGGTTATCAAGTGACTATGGTGAGAATTACAGAAAGAGTGATGAATACTTACTTTGCCGGATTGTGTTTTAGCAAGCCAGGGGAACACGAGGTTTTTAATGTGAATGCACGTCCGTCAGATGCCATAAATGTTGCACATAGAAGCAAGGTGCCCATATGTGTAAATAAACAGATTGTCTTAACTGATGCTGTAAGAATCAGTTATGGGATGGGCCGAGTGCGTGATACAAAGTCTGTTTATGATGTATCTCTTGACAGTGCCGCAGATGGTCCCGATTTTTTAATTCAAGAACTTGAGTTGGTTAATAATATCAGTTTAGCTATTAAAGAGGAAAGATATAAAGATGCAGCCATGTGGAGAGACAAACTAGTCAAGCTTCGCAAGTCAATTCAAGGGCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNase-RNase UVR

Protein Analysis

325

Amino Acids

36.45

Weight (kDa)

9.26

Isoelectric Point (pI)

38.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007911)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66050 AT5G66050 AT5G66050 AT5G66050
fragaria_vesca	FvH4_1g10980 FvH4_1g10980 FvH4_1g10980 FvH4_1g10980
malus_domestica	MD02G1122800.v1.1 MD15G1236800.v1.1
prunus_persica	Prupe.7G175700_v2.0.a1
pyrus_communis	pycom02g09580 pycom15g21060
rosa_chinensis	RchiOBHm_Chr2g0098241
rosa_laevigata	RLG00000016778
rosa_multiflora	Rmu_co8414957.1_g000001 Rmu_sc0009178.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144130
rosa_rugosa	Rorug02G0071400 Rorug02G0071500
rosa_samantha	Rh2AG118500 Rh2BG121600 Rh2CG123200
rosa_wichuraiana	Rw2G009300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	941
AccB1I	GGYRCC	1 cut(s)	721
AciI	CCGC	1 cut(s)	834
AclWI	GGATC	3 cut(s)	36, 46, 195
AcsI	RAATTY	1 cut(s)	476
AfiI	CCNNNNNNNGG	1 cut(s)	204
AgsI	TTSAA	2 cut(s)	860, 965
AhlI	ACTAGT	1 cut(s)	940
AjiI	CACGTC	1 cut(s)	683
AjnI	CCWGG	2 cut(s)	203, 649
AluBI	AGCT	7 cut(s)	11, 38, 174, 242, 347, 893, 949
AluI	AGCT	7 cut(s)	11, 38, 174, 242, 347, 893, 949
Alw21I	GWGCWC	1 cut(s)	13
Alw26I	GTCTC	3 cut(s)	299, 441, 927
AlwI	GGATC	3 cut(s)	36, 46, 195
AoxI	GGCC	5 cut(s)	65, 151, 385, 784, 968
ApeKI	GCWGC	4 cut(s)	38, 71, 174, 920
ApoI	RAATTY	1 cut(s)	476
ArsI	GACNNNNNNTTYG	2 cut(s)	302, 334
AspS9I	GGNCC	3 cut(s)	784, 842, 968
AsuHPI	GGTGA	3 cut(s)	209, 485, 604
AvaII	GGWCC	1 cut(s)	842
AxyI	CCTNAGG	1 cut(s)	382
BaeGI	GKGCMC	1 cut(s)	726
BanI	GGYRCC	1 cut(s)	721
BanII	GRGCYC	1 cut(s)	13
BauI	CACGAG	1 cut(s)	659
BbsI	GAAGAC	1 cut(s)	100
Bbv12I	GWGCWC	1 cut(s)	13
BbvI	GCAGC	4 cut(s)	25, 58, 161, 932
BccI	CCATC	4 cut(s)	50, 437, 775, 833
BciT130I	CCWGG	2 cut(s)	205, 651
BclI	TGATCA	1 cut(s)	535
BcoDI	GTCTC	3 cut(s)	299, 441, 927
BcuI	ACTAGT	1 cut(s)	940
BfaI	CTAG	2 cut(s)	75, 941
BisI	GCNGC	5 cut(s)	39, 72, 175, 834, 921
BlpI	GCTNAGC	1 cut(s)	34
BlsI	GCNGC	5 cut(s)	40, 73, 176, 835, 922
Bme1390I	CCNGG	2 cut(s)	205, 651
Bme18I	GGWCC	1 cut(s)	842
BmgBI	CACGTC	1 cut(s)	683
BmgT120I	GGNCC	3 cut(s)	784, 842, 968
BmiI	GGNNCC	2 cut(s)	723, 844
BmrFI	CCNGG	2 cut(s)	205, 651
BmsI	GCATC	4 cut(s)	490, 682, 748, 907
BpiI	GAAGAC	1 cut(s)	100
BpmI	CTGGAG	1 cut(s)	383
Bpu1102I	GCTNAGC	1 cut(s)	34
BpuEI	CTTGAG	3 cut(s)	333, 413, 887
Bsa29I	ATCGAT	2 cut(s)	161, 498
BsaJI	CCNNGG	1 cut(s)	650
Bsc4I	CCNNNNNNNGG	1 cut(s)	204
Bse1I	ACTGG	1 cut(s)	544
Bse21I	CCTNAGG	1 cut(s)	382
BseBI	CCWGG	2 cut(s)	205, 651
BseCI	ATCGAT	2 cut(s)	161, 498
BseDI	CCNNGG	1 cut(s)	650
BseGI	GGATG	2 cut(s)	42, 786
BseLI	CCNNNNNNNGG	1 cut(s)	204
BseMII	CTCAG	2 cut(s)	48, 270
BseNI	ACTGG	1 cut(s)	544
BseRI	GAGGAG	3 cut(s)	82, 239, 242
BseSI	GKGCMC	1 cut(s)	726
BseXI	GCAGC	4 cut(s)	25, 58, 161, 932
Bsh1285I	CGRYCG	1 cut(s)	165
BshFI	GGCC	5 cut(s)	67, 153, 387, 786, 970
BshNI	GGYRCC	1 cut(s)	721
BshVI	ATCGAT	2 cut(s)	161, 498
BsiEI	CGRYCG	1 cut(s)	165
BsiHKAI	GWGCWC	1 cut(s)	13
BsiSI	CCGG	1 cut(s)	630
BslFI	GGGAC	3 cut(s)	321, 539, 828
BslI	CCNNNNNNNGG	1 cut(s)	204
BsmAI	GTCTC	3 cut(s)	299, 441, 927
BsmBI	CGTCTC	1 cut(s)	299
BsmFI	GGGAC	3 cut(s)	321, 539, 828
BsmI	GAATGC	2 cut(s)	214, 682
BsnI	GGCC	5 cut(s)	67, 153, 387, 786, 970
Bsp1286I	GDGCHC	2 cut(s)	13, 726
Bsp143I	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
Bsp1720I	GCTNAGC	1 cut(s)	34
BspACI	CCGC	1 cut(s)	834
BspANI	GGCC	5 cut(s)	67, 153, 387, 786, 970
BspCNI	CTCAG	2 cut(s)	47, 269
BspDI	ATCGAT	2 cut(s)	161, 498
BspLI	GGNNCC	2 cut(s)	723, 844
BspPI	GGATC	3 cut(s)	36, 46, 195
BspT107I	GGYRCC	1 cut(s)	721
BsrI	ACTGG	1 cut(s)	544
BssECI	CCNNGG	1 cut(s)	650
BssMI	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
BssSI	CACGAG	1 cut(s)	659
Bst2BI	CACGAG	1 cut(s)	659
Bst2UI	CCWGG	2 cut(s)	205, 651
Bst4CI	ACNGT	4 cut(s)	115, 144, 278, 830
Bst6I	CTCTTC	2 cut(s)	190, 297
BstC8I	GCNNGC	2 cut(s)	69, 647
BstDEI	CTNAG	3 cut(s)	34, 256, 382
BstF5I	GGATG	2 cut(s)	42, 786
BstKTI	GATC	8 cut(s)	6, 31, 54, 165, 203, 217, 362, 538
BstMAI	GTCTC	3 cut(s)	299, 441, 927
BstMBI	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
BstMCI	CGRYCG	1 cut(s)	165
BstMWI	GCNNNNNNNGC	1 cut(s)	80
BstNI	CCWGG	2 cut(s)	205, 651
BstSCI	CCNGG	2 cut(s)	203, 649
BstSLI	GKGCMC	1 cut(s)	726
BstV1I	GCAGC	4 cut(s)	25, 58, 161, 932
BstV2I	GAAGAC	1 cut(s)	100
BstX2I	RGATCY	1 cut(s)	200
BstXI	CCANNNNNNTGG	1 cut(s)	63
BstYI	RGATCY	1 cut(s)	200
Bsu15I	ATCGAT	2 cut(s)	161, 498
Bsu36I	CCTNAGG	1 cut(s)	382
BsuRI	GGCC	5 cut(s)	67, 153, 387, 786, 970
BsuTUI	ATCGAT	2 cut(s)	161, 498
BtrI	CACGTC	1 cut(s)	683
BtsCI	GGATG	2 cut(s)	42, 786
BtsIMutI	CAGTG	1 cut(s)	835
Cac8I	GCNNGC	2 cut(s)	69, 647
Cfr13I	GGNCC	3 cut(s)	784, 842, 968
ClaI	ATCGAT	2 cut(s)	161, 498
CseI	GACGC	1 cut(s)	323
CviAII	CATG	2 cut(s)	20, 925
DdeI	CTNAG	3 cut(s)	34, 256, 382
DpnI	GATC	8 cut(s)	5, 30, 53, 164, 202, 216, 361, 537
DpnII	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
DraI	TTTAAA	1 cut(s)	298
DrdI	GACNNNNNNGTC	1 cut(s)	941
DseDI	GACNNNNNNGTC	1 cut(s)	941
Eam1104I	CTCTTC	2 cut(s)	190, 297
EarI	CTCTTC	2 cut(s)	190, 297
Ecl136II	GAGCTC	1 cut(s)	11
Eco24I	GRGCYC	1 cut(s)	13
Eco47I	GGWCC	1 cut(s)	842
Eco53kI	GAGCTC	1 cut(s)	11
Eco81I	CCTNAGG	1 cut(s)	382
EcoICRI	GAGCTC	1 cut(s)	11
EcoO109I	RGGNCCY	1 cut(s)	968
EcoRII	CCWGG	2 cut(s)	203, 649
EcoT38I	GRGCYC	1 cut(s)	13
Esp3I	CGTCTC	1 cut(s)	299
FaeI	CATG	2 cut(s)	23, 928
FaqI	GGGAC	3 cut(s)	321, 539, 828
FatI	CATG	2 cut(s)	19, 924
FauNDI	CATATG	1 cut(s)	728
FbaI	TGATCA	1 cut(s)	535
Fnu4HI	GCNGC	5 cut(s)	39, 72, 175, 834, 921
FokI	GGATG	2 cut(s)	29, 793
FriOI	GRGCYC	1 cut(s)	13
Fsp4HI	GCNGC	5 cut(s)	39, 72, 175, 834, 921
FspBI	CTAG	2 cut(s)	75, 941
GluI	GCNGC	5 cut(s)	39, 72, 175, 834, 921
GsuI	CTGGAG	1 cut(s)	383
HaeIII	GGCC	5 cut(s)	67, 153, 387, 786, 970
HapII	CCGG	1 cut(s)	630
HgaI	GACGC	1 cut(s)	323
Hin1II	CATG	2 cut(s)	23, 928
HindIII	AAGCTT	2 cut(s)	240, 947
HinfI	GANTC	2 cut(s)	527, 768
HpaII	CCGG	1 cut(s)	630
HphI	GGTGA	3 cut(s)	209, 485, 604
Hpy188I	TCNGA	4 cut(s)	8, 131, 259, 691
Hpy188III	TCNNGA	6 cut(s)	198, 363, 430, 824, 845, 860
Hpy99I	CGWCG	1 cut(s)	566
HpyCH4III	ACNGT	4 cut(s)	115, 144, 278, 830
HpyCH4IV	ACGT	1 cut(s)	682
HpyCH4V	TGCA	5 cut(s)	177, 283, 680, 707, 920
HpyF10VI	GCNNNNNNNGC	1 cut(s)	80
HpyF3I	CTNAG	3 cut(s)	34, 256, 382
HpySE526I	ACGT	1 cut(s)	682
Hsp92II	CATG	2 cut(s)	23, 928
Ksp22I	TGATCA	1 cut(s)	535
Kzo9I	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
LmnI	GCTCC	2 cut(s)	8, 102
Lsp1109I	GCAGC	4 cut(s)	25, 58, 161, 932
LweI	GCATC	4 cut(s)	490, 682, 748, 907
MaeI	CTAG	2 cut(s)	75, 941
MaeII	ACGT	1 cut(s)	682
MaeIII	GTNAC	2 cut(s)	22, 583
MalI	GATC	8 cut(s)	5, 30, 53, 164, 202, 216, 361, 537
MboI	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
MboII	GAAGA	4 cut(s)	78, 100, 177, 314
MfeI	CAATTG	1 cut(s)	462
MflI	RGATCY	1 cut(s)	200
MhlI	GDGCHC	2 cut(s)	13, 726
MluCI	AATT	8 cut(s)	14, 329, 462, 476, 539, 597, 855, 960
MlyI	GAGTC	1 cut(s)	521
MseI	TTAA	7 cut(s)	297, 669, 752, 854, 876, 897, 973
MspA1I	CMGCKG	1 cut(s)	38
MspI	CCGG	1 cut(s)	630
MspR9I	CCNGG	2 cut(s)	205, 651
MunI	CAATTG	1 cut(s)	462
Mva1269I	GAATGC	2 cut(s)	214, 682
MvaI	CCWGG	2 cut(s)	205, 651
MwoI	GCNNNNNNNGC	1 cut(s)	80
NdeI	CATATG	1 cut(s)	728
NdeII	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
NlaIII	CATG	2 cut(s)	23, 928
NlaIV	GGNNCC	2 cut(s)	723, 844
NmeAIII	GCCGAG	1 cut(s)	812
NmuCI	GTSAC	2 cut(s)	22, 583
PctI	GAATGC	2 cut(s)	214, 682
PfeI	GAWTC	1 cut(s)	768
PfoI	TCCNGGA	1 cut(s)	203
PkrI	GCNGC	5 cut(s)	40, 73, 176, 835, 922
Ple19I	CGATCG	1 cut(s)	165
PleI	GAGTC	1 cut(s)	521
PpsI	GAGTC	1 cut(s)	521
Psp124BI	GAGCTC	1 cut(s)	13
Psp6I	CCWGG	2 cut(s)	203, 649
PspGI	CCWGG	2 cut(s)	203, 649
PspN4I	GGNNCC	2 cut(s)	723, 844
PspPI	GGNCC	3 cut(s)	784, 842, 968
PsuI	RGATCY	1 cut(s)	200
PvuI	CGATCG	1 cut(s)	165
PvuII	CAGCTG	1 cut(s)	38
SacI	GAGCTC	1 cut(s)	13
SaqAI	TTAA	7 cut(s)	297, 669, 752, 854, 876, 897, 973
SatI	GCNGC	5 cut(s)	39, 72, 175, 834, 921
Sau3AI	GATC	8 cut(s)	3, 28, 51, 162, 200, 214, 359, 535
Sau96I	GGNCC	3 cut(s)	784, 842, 968
SchI	GAGTC	1 cut(s)	521
ScrFI	CCNGG	2 cut(s)	205, 651
SduI	GDGCHC	2 cut(s)	13, 726
SfaNI	GCATC	4 cut(s)	490, 682, 748, 907
SinI	GGWCC	1 cut(s)	842
SmlI	CTYRAG	3 cut(s)	348, 428, 866
SmoI	CTYRAG	3 cut(s)	348, 428, 866
SpeI	ACTAGT	1 cut(s)	940
Sse9I	AATT	8 cut(s)	14, 329, 462, 476, 539, 597, 855, 960
SsiI	CCGC	1 cut(s)	834
SspMI	CTAG	2 cut(s)	75, 941
SstI	GAGCTC	1 cut(s)	13
StyD4I	CCNGG	2 cut(s)	203, 649
TaaI	ACNGT	4 cut(s)	115, 144, 278, 830
TaiI	ACGT	1 cut(s)	685
TaqI	TCGA	5 cut(s)	50, 118, 161, 364, 498
TaqII	GACCGA	1 cut(s)	94
TasI	AATT	8 cut(s)	14, 329, 462, 476, 539, 597, 855, 960
TauI	GCSGC	1 cut(s)	836
TfiI	GAWTC	1 cut(s)	768
Tru1I	TTAA	7 cut(s)	297, 669, 752, 854, 876, 897, 973
Tru9I	TTAA	7 cut(s)	297, 669, 752, 854, 876, 897, 973
TscAI	CASTG	1 cut(s)	835
TseFI	GTSAC	2 cut(s)	22, 583
TseI	GCWGC	4 cut(s)	38, 71, 174, 920
Tsp45I	GTSAC	2 cut(s)	22, 583
TspDTI	ATGAA	2 cut(s)	8, 629
TspGWI	ACGGA	3 cut(s)	35, 41, 675
TspRI	CASTG	1 cut(s)	835
VpaK11BI	GGWCC	1 cut(s)	842
XapI	RAATTY	1 cut(s)	476
XspI	CTAG	2 cut(s)	75, 941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.