Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0007316

Physical Location & Seq

Genomic Coordinates Reverse (-)

22182082 .. 22184839

Gene Structure 2758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G270500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGGCTCTACAACATACCCTGAGGCTTCCATATCTCATCTCGTCACCAAAACAGAACAAATTCATAGTACCCCTTTCATTAGCTTCTTTAGGTCCTCAGTCTCAAGACATTCGAGCTAACAGAATATGGATGAAGAACACCAGTGTACCAACACATGGTGGTGGTAGCTCCAAAGTAACTAGATTGTGTGCTTCTAAAACTGTTGAGAAGGTCGGCTCCGATGAAGAAAAGGGAGAGCCGTTTAAGCCGTTTAATGACTCTGATAAGGAGGACGAACCTTGTTTAGGTGACAAAGATGATCCCTATTTGATGGGTTCTGAAGAGAGACGCGAGTGGAGAAGCAAAATTAGACAAGTTTTAGATACCAACCCTGATGTTGAGGAGGAGTTAGACCCTATTGAAAGGACGAAGAAGGTGCAACAACTTCTGGCCAATTATCCTCTTGTTGTGGAGGAGGATGATCCAGAATGGCCTGACGACGCGGATGGGCGTGGTTTCAAGTTGGATCAATTCTTTGACAAGATTACTATCAAGAATAATACGGCAAGAAAGGATGACAATGATAATGATGATAGCGACAATGAAATAGTGTGGCAGGATGATAATTACATTCGTCCCATTAAAGATGTAGTAACTGCAGAATGGGAAGAGGCTGTTTTCAAGGACATCAGCCCTTTAATCATTCTTGTACATAATCGCTATAAAAGGCCAAAAGAAAATGAAAAGATTCGGAATGAACTGGAGAAGGCTGTACACATCATATGGAACTGCAAGCTACCTTCACCAAGATGTATTGCAGTTGATGCTGTTACTGAGCATGATTTGGTATCTGCTCTCAAAGTGTCTGTCTTCCCCGAGATCATCTTCACTAAGGCTGGGAAGATTTTATATCGTGAGAAAGCAATTCGAAGTGGAGATGAGTTGTCAAAAGTGATGGCCTTCTTTTACTACGGAGCAGCCAGACCACCTTGCTTGAATGGCATTGGAGATAGGCAGGAACCGATTCCATATGTCTCTGCCAATGTCCAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006355 GO:0006996 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

345

Amino Acids

39.28

Weight (kDa)

5.12

Isoelectric Point (pI)

43.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007316)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31840 AT2G31840
fragaria_vesca	FvH4_1g00130 FvH4_1g00130 FvH4_1g00130 FvH4_1g00130
malus_domestica	MD15G1142700.v1.1
prunus_persica	Prupe.7G270500_v2.0.a1 Prupe.7G270500_v2.0.a1
pyrus_communis	pycom15g12870
rosa_chinensis	RchiOBHm_Chr2g0084441
rosa_laevigata	RLG00000015617
rosa_multiflora	Rmu_sc0009404.1_g000006 Rmu_sc0025868.1_g000001
rosa_roxburghii	Rroxscaffold_2G00156080
rosa_rugosa	Rorug01G0453600 Rorug01G0453700 Rorug01G0453700 Rorug01G0453800 Rorug01G0453900
rosa_samantha	Rh2AG001900 Rh2BG001600 Rh2CG001800 Rh2DG002000
rosa_wichuraiana	Rw2G000160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	155
AccII	CGCG	2 cut(s)	330, 482
AciI	CCGC	1 cut(s)	482
AclWI	GGATC	3 cut(s)	293, 455, 513
AcoI	YGGCCR	1 cut(s)	429
AcsI	RAATTY	1 cut(s)	59
AcuI	CTGAAG	1 cut(s)	339
AdeI	CACNNNGTG	1 cut(s)	158
AfaI	GTAC	4 cut(s)	69, 147, 690, 753
AfiI	CCNNNNNNNGG	2 cut(s)	155, 284
AgsI	TTSAA	4 cut(s)	401, 499, 661, 976
AluBI	AGCT	4 cut(s)	83, 116, 168, 775
AluI	AGCT	4 cut(s)	83, 116, 168, 775
Alw26I	GTCTC	3 cut(s)	105, 319, 1018
AlwI	GGATC	3 cut(s)	293, 455, 513
Ama87I	CYCGRG	1 cut(s)	854
AoxI	GGCC	4 cut(s)	429, 470, 707, 936
ApeKI	GCWGC	1 cut(s)	956
ApoI	RAATTY	1 cut(s)	59
ArsI	GACNNNNNNTTYG	2 cut(s)	831, 863
Asp700I	GAANNNNTTC	3 cut(s)	59, 726, 1002
AspS9I	GGNCC	1 cut(s)	92
AsuHPI	GGTGA	3 cut(s)	36, 299, 774
AsuII	TTCGAA	1 cut(s)	907
AvaI	CYCGRG	1 cut(s)	854
AvaII	GGWCC	1 cut(s)	92
AxyI	CCTNAGG	1 cut(s)	20
BaeI	ACNNNNGTAYC	2 cut(s)	129, 162
BalI	TGGCCA	1 cut(s)	431
BbsI	GAAGAC	1 cut(s)	841
BbvI	GCAGC	1 cut(s)	968
BccI	CCATC	3 cut(s)	304, 479, 928
BceAI	ACGGC	3 cut(s)	223, 232, 558
BcgI	CGANNNNNNTGC	2 cut(s)	397, 431
BcoDI	GTCTC	3 cut(s)	105, 319, 1018
BfaI	CTAG	1 cut(s)	180
BfmI	CTRYAG	1 cut(s)	636
BisI	GCNGC	1 cut(s)	957
BlsI	GCNGC	1 cut(s)	958
Bme18I	GGWCC	1 cut(s)	92
BmeT110I	CYCGRG	1 cut(s)	854
BmgT120I	GGNCC	1 cut(s)	92
BmiI	GGNNCC	2 cut(s)	217, 999
BmsI	GCATC	1 cut(s)	793
BpiI	GAAGAC	1 cut(s)	841
BpmI	CTGGAG	1 cut(s)	761
Bpu14I	TTCGAA	1 cut(s)	907
BpuEI	CTTGAG	1 cut(s)	87
BsaBI	GATNNNNATC	1 cut(s)	527
Bsc4I	CCNNNNNNNGG	2 cut(s)	155, 284
Bse1I	ACTGG	2 cut(s)	141, 744
Bse21I	CCTNAGG	1 cut(s)	20
Bse8I	GATNNNNATC	1 cut(s)	527
BseGI	GGATG	5 cut(s)	135, 463, 490, 559, 604
BseJI	GATNNNNATC	1 cut(s)	527
BseLI	CCNNNNNNNGG	2 cut(s)	155, 284
BseMII	CTCAG	3 cut(s)	11, 110, 804
BseNI	ACTGG	2 cut(s)	141, 744
BseRI	GAGGAG	3 cut(s)	395, 398, 467
BseXI	GCAGC	1 cut(s)	968
BseYI	CCCAGC	1 cut(s)	875
Bsh1236I	CGCG	2 cut(s)	330, 482
BshFI	GGCC	4 cut(s)	431, 472, 709, 938
BsiHKCI	CYCGRG	1 cut(s)	854
BslFI	GGGAC	1 cut(s)	600
BslI	CCNNNNNNNGG	2 cut(s)	155, 284
BsmAI	GTCTC	3 cut(s)	105, 319, 1018
BsmBI	CGTCTC	1 cut(s)	319
BsmFI	GGGAC	1 cut(s)	600
BsnI	GGCC	4 cut(s)	431, 472, 709, 938
BsoBI	CYCGRG	1 cut(s)	854
Bsp119I	TTCGAA	1 cut(s)	907
Bsp1407I	TGTACA	2 cut(s)	688, 751
Bsp143I	GATC	4 cut(s)	298, 460, 505, 858
BspACI	CCGC	1 cut(s)	482
BspANI	GGCC	4 cut(s)	431, 472, 709, 938
BspCNI	CTCAG	3 cut(s)	12, 109, 805
BspFNI	CGCG	2 cut(s)	330, 482
BspLI	GGNNCC	2 cut(s)	217, 999
BspMAI	CTGCAG	1 cut(s)	640
BspPI	GGATC	3 cut(s)	293, 455, 513
BspT104I	TTCGAA	1 cut(s)	907
BsrGI	TGTACA	2 cut(s)	688, 751
BsrI	ACTGG	2 cut(s)	141, 744
BssMI	GATC	4 cut(s)	298, 460, 505, 858
Bst4CI	ACNGT	1 cut(s)	202
Bst6I	CTCTTC	2 cut(s)	315, 642
BstAPI	GCANNNNNTGC	1 cut(s)	803
BstAUI	TGTACA	2 cut(s)	688, 751
BstBI	TTCGAA	1 cut(s)	907
BstC8I	GCNNGC	1 cut(s)	773
BstDEI	CTNAG	4 cut(s)	20, 96, 813, 870
BstENI	CCTNNNNNAGG	1 cut(s)	282
BstF5I	GGATG	5 cut(s)	135, 463, 490, 559, 604
BstFNI	CGCG	2 cut(s)	330, 482
BstKTI	GATC	4 cut(s)	301, 463, 508, 861
BstMAI	GTCTC	3 cut(s)	105, 319, 1018
BstMBI	GATC	4 cut(s)	298, 460, 505, 858
BstMWI	GCNNNNNNNGC	3 cut(s)	244, 803, 978
BstSFI	CTRYAG	1 cut(s)	636
BstUI	CGCG	2 cut(s)	330, 482
BstV1I	GCAGC	1 cut(s)	968
BstV2I	GAAGAC	1 cut(s)	841
Bsu36I	CCTNAGG	1 cut(s)	20
BsuRI	GGCC	4 cut(s)	431, 472, 709, 938
BtsCI	GGATG	5 cut(s)	135, 463, 490, 559, 604
BtsIMutI	CAGTG	1 cut(s)	148
Cac8I	GCNNGC	1 cut(s)	773
Cfr13I	GGNCC	1 cut(s)	92
CseI	GACGC	2 cut(s)	336, 488
Csp6I	GTAC	4 cut(s)	68, 146, 689, 752
CspCI	CAANNNNNGTGG	2 cut(s)	954, 989
CviAII	CATG	3 cut(s)	155, 818, 1032
CviQI	GTAC	4 cut(s)	68, 146, 689, 752
DdeI	CTNAG	4 cut(s)	20, 96, 813, 870
DpnI	GATC	4 cut(s)	300, 462, 507, 860
DpnII	GATC	4 cut(s)	298, 460, 505, 858
DraIII	CACNNNGTG	1 cut(s)	158
EaeI	YGGCCR	1 cut(s)	429
Eam1104I	CTCTTC	2 cut(s)	315, 642
EarI	CTCTTC	2 cut(s)	315, 642
Eco47I	GGWCC	1 cut(s)	92
Eco57I	CTGAAG	1 cut(s)	339
Eco81I	CCTNAGG	1 cut(s)	20
Eco88I	CYCGRG	1 cut(s)	854
EcoNI	CCTNNNNNAGG	1 cut(s)	282
EcoO109I	RGGNCCY	1 cut(s)	92
Esp3I	CGTCTC	1 cut(s)	319
FaeI	CATG	3 cut(s)	158, 821, 1035
FaqI	GGGAC	1 cut(s)	600
FatI	CATG	3 cut(s)	154, 817, 1031
FauNDI	CATATG	2 cut(s)	761, 1009
Fnu4HI	GCNGC	1 cut(s)	957
FokI	GGATG	5 cut(s)	142, 470, 497, 566, 611
Fsp4HI	GCNGC	1 cut(s)	957
FspBI	CTAG	1 cut(s)	180
GluI	GCNGC	1 cut(s)	957
GsaI	CCCAGC	1 cut(s)	879
GsuI	CTGGAG	1 cut(s)	761
HaeIII	GGCC	4 cut(s)	431, 472, 709, 938
HgaI	GACGC	2 cut(s)	336, 488
Hin1II	CATG	3 cut(s)	158, 821, 1035
HinfI	GANTC	3 cut(s)	257, 727, 1003
HphI	GGTGA	3 cut(s)	36, 299, 774
Hpy166II	GTNNAC	2 cut(s)	146, 754
Hpy188I	TCNGA	4 cut(s)	220, 262, 319, 732
Hpy188III	TCNNGA	4 cut(s)	104, 464, 532, 893
Hpy8I	GTNNAC	2 cut(s)	146, 754
Hpy99I	CGWCG	1 cut(s)	482
HpyAV	CCTTC	5 cut(s)	202, 406, 739, 789, 949
HpyCH4III	ACNGT	1 cut(s)	202
HpyCH4V	TGCA	4 cut(s)	418, 638, 771, 797
HpyF10VI	GCNNNNNNNGC	3 cut(s)	244, 803, 978
HpyF3I	CTNAG	4 cut(s)	20, 96, 813, 870
Hsp92II	CATG	3 cut(s)	158, 821, 1035
Kzo9I	GATC	4 cut(s)	298, 460, 505, 858
LmnI	GCTCC	3 cut(s)	173, 221, 953
Lsp1109I	GCAGC	1 cut(s)	968
LweI	GCATC	1 cut(s)	793
MaeI	CTAG	1 cut(s)	180
MaeIII	GTNAC	5 cut(s)	42, 175, 287, 631, 808
MalI	GATC	4 cut(s)	300, 462, 507, 860
MboI	GATC	4 cut(s)	298, 460, 505, 858
MboII	GAAGA	8 cut(s)	145, 236, 332, 421, 659, 841, 856, 892
MlsI	TGGCCA	1 cut(s)	431
MluCI	AATT	6 cut(s)	59, 345, 433, 509, 604, 903
MluNI	TGGCCA	1 cut(s)	431
MlyI	GAGTC	1 cut(s)	251
MmeI	TCCRAC	1 cut(s)	483
MnlI	CCTC	9 cut(s)	15, 105, 262, 373, 376, 445, 448, 450, 643
Mox20I	TGGCCA	1 cut(s)	431
MroXI	GAANNNNTTC	3 cut(s)	59, 726, 1002
MscI	TGGCCA	1 cut(s)	431
MseI	TTAA	4 cut(s)	243, 252, 621, 677
MslI	CAYNNNNRTG	2 cut(s)	159, 787
Msp20I	TGGCCA	1 cut(s)	431
MvnI	CGCG	2 cut(s)	330, 482
MwoI	GCNNNNNNNGC	3 cut(s)	244, 803, 978
NdeI	CATATG	2 cut(s)	761, 1009
NdeII	GATC	4 cut(s)	298, 460, 505, 858
NlaIII	CATG	3 cut(s)	158, 821, 1035
NlaIV	GGNNCC	2 cut(s)	217, 999
NmuCI	GTSAC	2 cut(s)	42, 287
NspV	TTCGAA	1 cut(s)	907
PdmI	GAANNNNTTC	3 cut(s)	59, 726, 1002
PfeI	GAWTC	2 cut(s)	727, 1003
PflMI	CCANNNNNTGG	1 cut(s)	155
PkrI	GCNGC	1 cut(s)	958
PleI	GAGTC	1 cut(s)	251
PpsI	GAGTC	1 cut(s)	251
PpuMI	RGGWCCY	1 cut(s)	92
Psp5II	RGGWCCY	1 cut(s)	92
PspFI	CCCAGC	1 cut(s)	875
PspN4I	GGNNCC	2 cut(s)	217, 999
PspPI	GGNCC	1 cut(s)	92
PspPPI	RGGWCCY	1 cut(s)	92
PstI	CTGCAG	1 cut(s)	640
RsaI	GTAC	4 cut(s)	69, 147, 690, 753
RsaNI	GTAC	4 cut(s)	68, 146, 689, 752
RseI	CAYNNNNRTG	2 cut(s)	159, 787
SaqAI	TTAA	4 cut(s)	243, 252, 621, 677
SatI	GCNGC	1 cut(s)	957
Sau3AI	GATC	4 cut(s)	298, 460, 505, 858
Sau96I	GGNCC	1 cut(s)	92
SchI	GAGTC	1 cut(s)	251
SfaNI	GCATC	1 cut(s)	793
SfcI	CTRYAG	1 cut(s)	636
SfuI	TTCGAA	1 cut(s)	907
SinI	GGWCC	1 cut(s)	92
SmiMI	CAYNNNNRTG	2 cut(s)	159, 787
SmlI	CTYRAG	1 cut(s)	102
SmoI	CTYRAG	1 cut(s)	102
Sse9I	AATT	6 cut(s)	59, 345, 433, 509, 604, 903
SsiI	CCGC	1 cut(s)	482
SspMI	CTAG	1 cut(s)	180
TaaI	ACNGT	1 cut(s)	202
TaqI	TCGA	2 cut(s)	112, 907
TasI	AATT	6 cut(s)	59, 345, 433, 509, 604, 903
TatI	WGTACW	2 cut(s)	688, 751
TfiI	GAWTC	2 cut(s)	727, 1003
Tru1I	TTAA	4 cut(s)	243, 252, 621, 677
Tru9I	TTAA	4 cut(s)	243, 252, 621, 677
TscAI	CASTG	1 cut(s)	148
TseFI	GTSAC	2 cut(s)	42, 287
TseI	GCWGC	1 cut(s)	956
Tsp45I	GTSAC	2 cut(s)	42, 287
TspDTI	ATGAA	7 cut(s)	52, 66, 146, 237, 597, 735, 750
TspGWI	ACGGA	1 cut(s)	966
TspRI	CASTG	1 cut(s)	148
Van91I	CCANNNNNTGG	1 cut(s)	155
VpaK11BI	GGWCC	1 cut(s)	92
XagI	CCTNNNNNAGG	1 cut(s)	282
XapI	RAATTY	1 cut(s)	59
XmnI	GAANNNNTTC	3 cut(s)	59, 726, 1002
XspI	CTAG	1 cut(s)	180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.