Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004743

Physical Location & Seq

Genomic Coordinates Forward (+)

6143789 .. 6148384

Gene Structure 4596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G054200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3522 bp

ATGGCCAACGAGAATGAGAAGAAACTCAATGAAGAAGAAGACGACGAGCCCAAAATCCCAGTCTTCACAGTCCTTAAAAATGGAGCGATTCTCAAGAACATCTTCATCGTCAACAAACCCCCACCCCCACCTACCAATAAACCAATCTCCTCCGTCCATCAACAAACCCAAGAAGAAATCTTGATCGTCGGTCGCCACCCCGATTGCAACATCGTCTTGACTCACCCCAGCATCAGCAGATTCCACCTCCAAATCCTCTCTAACCCTTCTTCCAAGAAGCTCTCTCTCACCGATTTATCATCAGTGCATGGCACCTGGGTTTCGGAGAAGAGGCTTGAGCCAGGGGTCAGGGTGGAGCTGAGGGAAGGGGACATACTGAGGGTTGGTGGTTCCAGCAGGGTCTACAGCCTTCACTGGATACCTTTGAGTCGAGCCTATGATTTCGAAACGTCTTTTGTTCCGTTGACAAATAATGATGAAGATGAAACTGCAGAAGGAGTAGTCCAGGGTGAGAATTCTCTGTCAGTTGAAAATAAAGAAATTGAATCTCCGGATTCAAATTCTGTGGGTATAGAATCTTTGTTGCCTGAAGAAAATGTTGGACTAAGTGGGAAGAAGGAGATCCCGTCAGCACCTCCAATGCCTGAAAATGCCATTTACTCAATTTTTGATCAAATTGAAGAAGGTGGTGACAGCTTATCAAAAGGTACTGATGAAGTGAATGAATTCTCAAGCTTCTGGGCATTTGGAACTGAATCGGTGAACCTATTTTTGAATATGGAAGAATCTAGTTCTAATCCAAAGGAAAACCCAGAGAGTTCCTATTTTATTGAAATGGAAAGGGAAACTTATCCTACTGCTCAAGTGCCTGAGGAAACCGAGAACCAAAGCCCATTGATAAAAGACCATGGACACATTGATATTTCATGTCCGTCTGGACCTCTAGTGATGGAGAACCTAACCTTCCCGATCGGCGAAGTCCTTGGAGAGAACAAAGATGAACAAGTTGAAGAAGAAAGCCTGGAACCAATTTCGAACTTGCTGGTTAACCTGAATTTTGAACATTTAGAAGAAAAGGAAGAGGAAGCTTATCCTGCTGCTCAAGTACCTGAGAAACTTGACAGCCAAAGTCCACTGAGAAAAGATGATGGACCTCTAGTGATGGAGAACCTATCTTTGCCGATCGGCAAAGTCTTTGGAGAGGACAAAGATGAACAAGTTGAAGAAGAACGCCTGGAACCAAATTCGAGCTTGCTGGTTAACCTGAATTTTGAACATTTAGAAGAAAAGGAAGAGGAAACTTATCCTGCTGCTCAAGTACCTGAGAAAATTACCAGCCAAAGTCCATTGAGAAAAAATGATGGACCTCTGGTCATGGAGAACCTATCCTTGCCGATAGGTGAAGTCCTTGGAGAGGACAAAGATGAACAAGTTGAAGAAGAAATCCCGGAACCAATTTCAAACTTGCTGGATAACCTGAATTTTGAACGTTTAGAAGAAAAGGAAGAGGAAGCTTATCTTGCTGCTCAAGTACCTCAGAAAATTGACAGCCAAAGTCCATTGAGAAAAAATTATGGACCTCTAGTCATGGAGAACCTATCCTTGCTGATAGGCGATGTCCTTGGAGAGGACAAATATGAACAAGTTGAAGAAGAAATCCTGGAACCAATTTCAAACTTGCTGGATAACCTGAATTTTGAATATTTAGAAGAAAAGGAAGAGGAAGCTTATCCTACTGCTCAAGTACCTGAGAAAATTGACAGCCAAAGTCCACTGAGAAAAGATGATGGACAGACTGATGTATCGTGTCTTTCGTCTCCTCTTGTGATGGAGAACTTATCCTTTCCATTTGGGGAAGTCCTTGCCAAGAGTGAAGGTCAACAAGTTGAAGAAGAAAGCTTGACCTTGGAACAAGAATTAAACTTGCTGGTTAACCTGAATTTTGAACATTCTGATGAAATAGAATGTCCAGTGGAAGAAAGAATTGGAGAAACTGAAAACAAAAGTGTGTCACCAGAAGACCATGAAAAGAGGGATTCTACAAGCCTCCATTCTGAACCTCGTATGAAAGAATCTATAAACTCATCTACACTAGATGGGATACTGTCAGAGTTAATAGATGACAGAGAAAGCCAGACCCCACAATCTCTCTTTACTGCAGTAGGACAGCCTGAATCAGACATCTGTGAAAGCCCTCCACTGAGATCCGGGAATAAATCAGGCATGAGGGGAAGCATTTGGGCAAGAAGAGGTAAACGTGCTAGTGTTGTTCAGCTTCAAACAGATAGGAGTAGAGGGAAAACAGAGGAGGCAAGATATGGTGATGACATTGAACTGGAGGAGGAAATCTTTACACCAGACAAGGAAAATTTGACCCCAAATACTCTTCGACTGAGGTCCTTGAAAAGGAATGGTGAGATAGAATTTAAGCATTCCAAGTCACGTAGATCATCCTCGTTGAAACTAAGTTTAATTTCCAGTATCTGTCAACAAGATCTGATTGTATCCCCAGAAAAAGAAAACCAGAAATTGAAGGAACTCCGAAAAAGAAAATCAGTGGGAACTACTTCTGGAAAGCAAGCTAGGGTGGAAAAAAAGTTGGTAGAAACAAAAGAAAGAAGAGAAAGGATGCCATTTCAATCACTACTTAAAAATTCTGGAGGCAAGAACATATCAGAAACCTCGGTCCCAAACACAGCCACAAGAAGCAGCGCATCTTCCAGTTGTACTAGAACCACGAGAAAGGTCGCCAATCCACTCCTTAATAAATCTGTTGGAGAAGGAAAGAGGAGGGGCTGGACTATGGTTGCAGACACTACTACTCTTCTTGACAAGGAATCAAGGAAGTCATTGCAGCTTCTGCAAGGTCTTAAGGGGACTCGGTTAATAATTCCAAGAATGGTCATACGGGAACTGGATTACTTGAAGCAACGTGGCAGCCTTTTCAGAAGGAAAACAGAGGCTTGTCTGGTGCTCGAATGGATTGAAGATTGCATGGTAAAAACAAATTGGTGGATCCATGTCCAGAGCTCAATGGAAGATGGAAGACTGATAGCTCCAACCCCTCCCGTTTCTCCGCAGTCTCTATCTAGTGATAAGAGCTGGGCCTTTCCTTCTGGGGCAACAAGCTCATTGCCTTTTTCAAGATGGAGTTTGATGGACCTTGTATCACCAACAGCAGAAGACCATATCCTTGATTGTGCTCTTTTGCATAGAAAGATGAAGAATGATGGACAACTTGTCCTTCTAAGTAATGATGTCACCTTGAAGATCAAAGCCATGGCAGAGGGTTTGCTTTGTGAGACAGCTGAAGAATTCCGTGAGAGTCTGGTGAATCCAATATCTGAGAGGTTTATGTGGCCTGATAGCTCTCCCCGTGGGCGCACTTGGTCATACGTACCCGATGCAGTTTTGAGAGAAAGGTACAGCAGCTGCCCTCTGAAGAAGTCATCAACTGGAGAAGGTGCAAAGGGTTTGAAGCTCATTTTGCTCCATAATTCTCATTATGGACAGATCCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004540 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006401 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008995 GO:0009056 GO:0009057 GO:0009555 GO:0009892 GO:0009987 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0016070 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019439 GO:0019888 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0034641 GO:0034655 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043666 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045936 GO:0046483 GO:0046700 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098772 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PIN_4

Protein Analysis

1174

Amino Acids

131.84

Weight (kDa)

4.78

Isoelectric Point (pI)

64.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34355 AT1G34355 AT1G34355
fragaria_vesca	FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232
malus_domestica	MD05G1040500.v1.1 MD10G1046600.v1.1
prunus_persica	Prupe.8G054200_v2.0.a1
pyrus_communis	pycom05g03310 pycom10g03280 pycom10g03290
rosa_chinensis	RchiOBHm_Chr6g0272171
rosa_laevigata	RLG00000013694
rosa_multiflora	Rmu_sc0005748.1_g000012
rosa_roxburghii	Rroxscaffold_7G00196530
rosa_rugosa	Rorug06G0066700
rosa_samantha	Rh6AG183500 Rh6BG183500 Rh6BG183600 Rh6CG184900 Rh6DG176600
rosa_wichuraiana	Rw6G015820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	311
AccI	GTMKAC	1 cut(s)	402
AccIII	TCCGGA	1 cut(s)	550
AciI	CCGC	1 cut(s)	3077
AclI	AACGTT	1 cut(s)	1489
AclWI	GGATC	5 cut(s)	616, 2199, 3010, 3023, 3508
AcoI	YGGCCR	1 cut(s)	3
AcuI	CTGAAG	3 cut(s)	609, 3330, 3461
AfaI	GTAC	8 cut(s)	709, 1107, 1320, 1533, 1746, 2728, 3399, 3425
AfiI	CCNNNNNNNGG	3 cut(s)	1414, 1627, 2406
AflII	CTTAAG	1 cut(s)	2870
AhdI	GACNNNNNGTC	3 cut(s)	1370, 1583, 3239
AjnI	CCWGG	6 cut(s)	314, 340, 504, 1020, 1233, 1659
AjuI	GAANNNNNNNTTGG	4 cut(s)	582, 614, 1968, 2000
Alw21I	GWGCWC	3 cut(s)	2976, 3032, 3205
Alw26I	GTCTC	3 cut(s)	1821, 3087, 3296
AlwI	GGATC	5 cut(s)	616, 2199, 3010, 3023, 3508
AlwNI	CAGNNNCTG	3 cut(s)	2484, 2860, 3432
Aor13HI	TCCGGA	1 cut(s)	550
AoxI	GGCC	3 cut(s)	3, 3105, 3359
ApeKI	GCWGC	8 cut(s)	1097, 1310, 1523, 2709, 2854, 2937, 3429, 3432
ArsI	GACNNNNNNTTYG	2 cut(s)	45, 77
Asp700I	GAANNNNTTC	3 cut(s)	101, 725, 2566
AspLEI	GCGC	2 cut(s)	2714, 3384
AspS9I	GGNCC	8 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3105, 3160
AsuC2I	CCSGG	2 cut(s)	1448, 2209
AsuII	TTCGAA	2 cut(s)	444, 1034
AvaII	GGWCC	7 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3160
AxyI	CCTNAGG	1 cut(s)	870
BaeI	ACNNNNGTAYC	2 cut(s)	1785, 1818
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	3015
BanI	GGYRCC	1 cut(s)	311
BanII	GRGCYC	2 cut(s)	51, 3032
BarI	GAAGNNNNNNTAC	2 cut(s)	357, 389
BauI	CACGAG	1 cut(s)	2737
BbsI	GAAGAC	5 cut(s)	45, 55, 2025, 3052, 3189
Bbv12I	GWGCWC	3 cut(s)	2976, 3032, 3205
BbvCI	CCTCAGC	1 cut(s)	359
BbvI	GCAGC	8 cut(s)	1084, 1297, 1510, 2721, 2866, 2949, 3419, 3441
BciT130I	CCWGG	6 cut(s)	316, 342, 506, 1022, 1235, 1661
BciVI	GTATCC	3 cut(s)	411, 2094, 2515
BclI	TGATCA	1 cut(s)	670
BcnI	CCSGG	2 cut(s)	1448, 2209
BcoDI	GTCTC	3 cut(s)	1821, 3087, 3296
BfaI	CTAG	9 cut(s)	789, 944, 1157, 1583, 2093, 2262, 2583, 2730, 3090
BfmI	CTRYAG	3 cut(s)	403, 489, 2157
BfrI	CTTAAG	1 cut(s)	2870
BfuI	GTATCC	3 cut(s)	411, 2094, 2515
BglII	AGATCT	1 cut(s)	2494
BisI	GCNGC	8 cut(s)	1098, 1311, 1524, 2710, 2855, 2938, 3430, 3433
BlsI	GCNGC	8 cut(s)	1099, 1312, 1525, 2711, 2856, 2939, 3431, 3434
Bme1390I	CCNGG	8 cut(s)	316, 342, 506, 1022, 1235, 1448, 1661, 2209
Bme18I	GGWCC	7 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3160
BmeRI	GACNNNNNGTC	3 cut(s)	1370, 1583, 3239
BmgT120I	GGNCC	8 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3105, 3160
BmiI	GGNNCC	8 cut(s)	313, 391, 1026, 1239, 1452, 1665, 2688, 3017
BmrFI	CCNGG	8 cut(s)	316, 342, 506, 1022, 1235, 1448, 1661, 2209
BmrI	ACTGGG	1 cut(s)	53
BmsI	GCATC	4 cut(s)	240, 2619, 2723, 3394
BmuI	ACTGGG	1 cut(s)	53
BoxI	GACNNNNGTC	1 cut(s)	2395
BpiI	GAAGAC	5 cut(s)	45, 55, 2025, 3052, 3189
BplI	GAGNNNNNCTC	2 cut(s)	75, 107
BpmI	CTGGAG	3 cut(s)	2357, 2679, 3477
Bpu10I	CCTNAGC	1 cut(s)	359
Bpu14I	TTCGAA	2 cut(s)	444, 1034
BpuEI	CTTGAG	8 cut(s)	77, 356, 715, 846, 1086, 1299, 1512, 1725
BpuMI	CCSGG	2 cut(s)	1448, 2209
BsaAI	YACGTR	2 cut(s)	2444, 3397
BsaWI	WCCGGW	1 cut(s)	550
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	3 cut(s)	1414, 1627, 2406
Bse1I	ACTGG	8 cut(s)	59, 419, 1970, 2340, 2478, 2721, 2919, 3460
Bse21I	CCTNAGG	1 cut(s)	870
Bse3DI	GCAATG	2 cut(s)	2849, 3131
BseAI	TCCGGA	1 cut(s)	550
BseBI	CCWGG	6 cut(s)	316, 342, 506, 1022, 1235, 1661
BseGI	GGATG	2 cut(s)	2450, 2634
BseLI	CCNNNNNNNGG	3 cut(s)	1414, 1627, 2406
BseMI	GCAATG	2 cut(s)	2849, 3131
BseNI	ACTGG	8 cut(s)	59, 419, 1970, 2340, 2478, 2721, 2919, 3460
BseRI	GAGGAG	5 cut(s)	139, 1809, 2321, 2354, 2803
BseXI	GCAGC	8 cut(s)	1084, 1297, 1510, 2721, 2866, 2949, 3419, 3441
BseYI	CCCAGC	2 cut(s)	227, 3102
Bsh1285I	CGRYCG	3 cut(s)	193, 972, 1185
BshFI	GGCC	3 cut(s)	5, 3107, 3361
BshNI	GGYRCC	1 cut(s)	311
BsiEI	CGRYCG	3 cut(s)	193, 972, 1185
BsiHKAI	GWGCWC	3 cut(s)	2976, 3032, 3205
BsiSI	CCGG	3 cut(s)	551, 1448, 2208
BslFI	GGGAC	3 cut(s)	383, 2672, 2890
BslI	CCNNNNNNNGG	3 cut(s)	1414, 1627, 2406
BsmAI	GTCTC	3 cut(s)	1821, 3087, 3296
BsmBI	CGTCTC	1 cut(s)	1821
BsmFI	GGGAC	3 cut(s)	383, 2672, 2890
BsmI	GAATGC	1 cut(s)	2431
BsnI	GGCC	3 cut(s)	5, 3107, 3361
Bsp119I	TTCGAA	2 cut(s)	444, 1034
Bsp1286I	GDGCHC	4 cut(s)	51, 2976, 3032, 3205
Bsp13I	TCCGGA	1 cut(s)	550
Bsp19I	CCATGG	2 cut(s)	907, 3279
BspACI	CCGC	1 cut(s)	3077
BspANI	GGCC	3 cut(s)	5, 3107, 3361
BspEI	TCCGGA	1 cut(s)	550
BspLI	GGNNCC	8 cut(s)	313, 391, 1026, 1239, 1452, 1665, 2688, 3017
BspMAI	CTGCAG	2 cut(s)	493, 2161
BspPI	GGATC	5 cut(s)	616, 2199, 3010, 3023, 3508
BspT104I	TTCGAA	2 cut(s)	444, 1034
BspT107I	GGYRCC	1 cut(s)	311
BspTI	CTTAAG	1 cut(s)	2870
BsrDI	GCAATG	2 cut(s)	2849, 3131
BsrI	ACTGG	8 cut(s)	59, 419, 1970, 2340, 2478, 2721, 2919, 3460
BssSI	CACGAG	1 cut(s)	2737
BssT1I	CCWWGG	6 cut(s)	907, 982, 1408, 1621, 1905, 3279
Bst2BI	CACGAG	1 cut(s)	2737
Bst2UI	CCWGG	6 cut(s)	316, 342, 506, 1022, 1235, 1661
Bst4CI	ACNGT	2 cut(s)	70, 2106
Bst6I	CTCTTC	9 cut(s)	323, 1074, 1287, 1500, 1713, 2242, 2391, 2614, 2829
BstAFI	CTTAAG	1 cut(s)	2870
BstAPI	GCANNNNNTGC	1 cut(s)	2860
BstBAI	YACGTR	2 cut(s)	2444, 3397
BstBI	TTCGAA	2 cut(s)	444, 1034
BstC8I	GCNNGC	2 cut(s)	1253, 2580
BstDSI	CCRYGG	3 cut(s)	907, 3279, 3376
BstENI	CCTNNNNNAGG	3 cut(s)	1412, 1625, 2404
BstF5I	GGATG	2 cut(s)	2450, 2634
BstHHI	GCGC	2 cut(s)	2714, 3384
BstMAI	GTCTC	3 cut(s)	1821, 3087, 3296
BstMCI	CGRYCG	3 cut(s)	193, 972, 1185
BstMWI	GCNNNNNNNGC	4 cut(s)	1094, 1520, 2860, 3487
BstNI	CCWGG	6 cut(s)	316, 342, 506, 1022, 1235, 1661
BstPAI	GACNNNNGTC	1 cut(s)	2395
BstSCI	CCNGG	8 cut(s)	314, 340, 504, 1020, 1233, 1446, 1659, 2207
BstSFI	CTRYAG	3 cut(s)	403, 489, 2157
BstSNI	TACGTA	1 cut(s)	3397
BstV1I	GCAGC	8 cut(s)	1084, 1297, 1510, 2721, 2866, 2949, 3419, 3441
BstV2I	GAAGAC	5 cut(s)	45, 55, 2025, 3052, 3189
BstX2I	RGATCY	5 cut(s)	621, 2204, 2494, 3015, 3513
BstYI	RGATCY	5 cut(s)	621, 2204, 2494, 3015, 3513
Bsu36I	CCTNAGG	1 cut(s)	870
BsuI	GTATCC	3 cut(s)	411, 2094, 2515
BsuRI	GGCC	3 cut(s)	5, 3107, 3361
BtgI	CCRYGG	3 cut(s)	907, 3279, 3376
BtgZI	GCGATG	1 cut(s)	1629
BtsCI	GGATG	2 cut(s)	2450, 2634
BtsIMutI	CAGTG	7 cut(s)	309, 412, 1133, 1772, 1977, 2198, 2562
Cac8I	GCNNGC	2 cut(s)	1253, 2580
CaiI	CAGNNNCTG	3 cut(s)	2484, 2860, 3432
CfoI	GCGC	2 cut(s)	2714, 3384
Cfr13I	GGNCC	8 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3105, 3160
Csp6I	GTAC	8 cut(s)	708, 1106, 1319, 1532, 1745, 2727, 3398, 3424
CspCI	CAANNNNNGTGG	4 cut(s)	185, 220, 546, 581
CviQI	GTAC	8 cut(s)	708, 1106, 1319, 1532, 1745, 2727, 3398, 3424
DriI	GACNNNNNGTC	3 cut(s)	1370, 1583, 3239
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	9 cut(s)	323, 1074, 1287, 1500, 1713, 2242, 2391, 2614, 2829
Eam1105I	GACNNNNNGTC	3 cut(s)	1370, 1583, 3239
EarI	CTCTTC	9 cut(s)	323, 1074, 1287, 1500, 1713, 2242, 2391, 2614, 2829
Ecl136II	GAGCTC	1 cut(s)	3030
Eco105I	TACGTA	1 cut(s)	3397
Eco130I	CCWWGG	6 cut(s)	907, 982, 1408, 1621, 1905, 3279
Eco24I	GRGCYC	2 cut(s)	51, 3032
Eco47I	GGWCC	7 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3160
Eco53kI	GAGCTC	1 cut(s)	3030
Eco57I	CTGAAG	3 cut(s)	609, 3330, 3461
Eco81I	CCTNAGG	1 cut(s)	870
EcoICRI	GAGCTC	1 cut(s)	3030
EcoNI	CCTNNNNNAGG	3 cut(s)	1412, 1625, 2404
EcoO109I	RGGNCCY	1 cut(s)	2397
EcoRI	GAATTC	3 cut(s)	514, 725, 3314
EcoRII	CCWGG	6 cut(s)	314, 340, 504, 1020, 1233, 1659
EcoT14I	CCWWGG	6 cut(s)	907, 982, 1408, 1621, 1905, 3279
EcoT38I	GRGCYC	2 cut(s)	51, 3032
ErhI	CCWWGG	6 cut(s)	907, 982, 1408, 1621, 1905, 3279
Esp3I	CGTCTC	1 cut(s)	1821
FalI	AAGNNNNNCTT	6 cut(s)	86, 118, 832, 864, 1503, 1535
FaqI	GGGAC	3 cut(s)	383, 2672, 2890
FbaI	TGATCA	1 cut(s)	670
FblI	GTMKAC	1 cut(s)	402
Fnu4HI	GCNGC	8 cut(s)	1098, 1311, 1524, 2710, 2855, 2938, 3430, 3433
FokI	GGATG	2 cut(s)	2437, 2641
FriOI	GRGCYC	2 cut(s)	51, 3032
Fsp4HI	GCNGC	8 cut(s)	1098, 1311, 1524, 2710, 2855, 2938, 3430, 3433
FspBI	CTAG	9 cut(s)	789, 944, 1157, 1583, 2093, 2262, 2583, 2730, 3090
GlaI	GCGC	2 cut(s)	2713, 3383
GluI	GCNGC	8 cut(s)	1098, 1311, 1524, 2710, 2855, 2938, 3430, 3433
GsaI	CCCAGC	2 cut(s)	231, 3106
GsuI	CTGGAG	3 cut(s)	2357, 2679, 3477
HaeIII	GGCC	3 cut(s)	5, 3107, 3361
HapII	CCGG	3 cut(s)	551, 1448, 2208
HhaI	GCGC	2 cut(s)	2714, 3384
Hin6I	GCGC	2 cut(s)	2712, 3382
HinP1I	GCGC	2 cut(s)	2712, 3382
HincII	GTYRAC	7 cut(s)	112, 465, 1048, 1261, 1880, 1933, 2489
HindII	GTYRAC	7 cut(s)	112, 465, 1048, 1261, 1880, 1933, 2489
HindIII	AAGCTT	5 cut(s)	733, 1086, 1512, 1725, 1897
HpaI	GTTAAC	3 cut(s)	1048, 1261, 1933
HpaII	CCGG	3 cut(s)	551, 1448, 2208
Hpy99I	CGWCG	2 cut(s)	47, 191
HpyCH4III	ACNGT	2 cut(s)	70, 2106
HpyCH4IV	ACGT	6 cut(s)	449, 1489, 2257, 2443, 2932, 3396
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1094, 1520, 2860, 3487
HpySE526I	ACGT	6 cut(s)	449, 1489, 2257, 2443, 2932, 3396
HspAI	GCGC	2 cut(s)	2712, 3382
Kpn2I	TCCGGA	1 cut(s)	550
Ksp22I	TGATCA	1 cut(s)	670
KspAI	GTTAAC	3 cut(s)	1048, 1261, 1933
LmnI	GCTCC	4 cut(s)	83, 355, 3061, 3495
Lsp1109I	GCAGC	8 cut(s)	1084, 1297, 1510, 2721, 2866, 2949, 3419, 3441
LweI	GCATC	4 cut(s)	240, 2619, 2723, 3394
MaeI	CTAG	9 cut(s)	789, 944, 1157, 1583, 2093, 2262, 2583, 2730, 3090
MaeII	ACGT	6 cut(s)	449, 1489, 2257, 2443, 2932, 3396
MaeIII	GTNAC	4 cut(s)	689, 2010, 2439, 3259
MflI	RGATCY	5 cut(s)	621, 2204, 2494, 3015, 3513
MhlI	GDGCHC	4 cut(s)	51, 2976, 3032, 3205
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	214, 436, 2872, 3334
MmeI	TCCRAC	3 cut(s)	580, 2755, 3083
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	550
MroXI	GAANNNNTTC	3 cut(s)	101, 725, 2566
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	1 cut(s)	1953
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	3308, 3432
MspCI	CTTAAG	1 cut(s)	2870
MspI	CCGG	3 cut(s)	551, 1448, 2208
MspR9I	CCNGG	8 cut(s)	316, 342, 506, 1022, 1235, 1448, 1661, 2209
Mva1269I	GAATGC	1 cut(s)	2431
MvaI	CCWGG	6 cut(s)	316, 342, 506, 1022, 1235, 1661
MwoI	GCNNNNNNNGC	4 cut(s)	1094, 1520, 2860, 3487
NciI	CCSGG	2 cut(s)	1448, 2209
NcoI	CCATGG	2 cut(s)	907, 3279
NlaIV	GGNNCC	8 cut(s)	313, 391, 1026, 1239, 1452, 1665, 2688, 3017
NmuCI	GTSAC	4 cut(s)	689, 2010, 2439, 3259
NspV	TTCGAA	2 cut(s)	444, 1034
PcsI	WCGNNNNNNNCGW	1 cut(s)	1811
PctI	GAATGC	1 cut(s)	2431
PdmI	GAANNNNTTC	3 cut(s)	101, 725, 2566
PfoI	TCCNGGA	3 cut(s)	1446, 1659, 2207
PkrI	GCNGC	8 cut(s)	1099, 1312, 1525, 2711, 2856, 2939, 3431, 3434
Ple19I	CGATCG	2 cut(s)	972, 1185
PleI	GAGTC	4 cut(s)	214, 435, 2872, 3333
PpsI	GAGTC	4 cut(s)	214, 435, 2872, 3333
Ppu21I	YACGTR	2 cut(s)	2444, 3397
PpuMI	RGGWCCY	1 cut(s)	2397
PshAI	GACNNNNGTC	1 cut(s)	2395
Psp124BI	GAGCTC	1 cut(s)	3032
Psp1406I	AACGTT	1 cut(s)	1489
Psp5II	RGGWCCY	1 cut(s)	2397
Psp6I	CCWGG	6 cut(s)	314, 340, 504, 1020, 1233, 1659
PspFI	CCCAGC	2 cut(s)	227, 3102
PspGI	CCWGG	6 cut(s)	314, 340, 504, 1020, 1233, 1659
PspN4I	GGNNCC	8 cut(s)	313, 391, 1026, 1239, 1452, 1665, 2688, 3017
PspPI	GGNCC	8 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3105, 3160
PspPPI	RGGWCCY	1 cut(s)	2397
PstI	CTGCAG	2 cut(s)	493, 2161
PstNI	CAGNNNCTG	3 cut(s)	2484, 2860, 3432
PsuI	RGATCY	5 cut(s)	621, 2204, 2494, 3015, 3513
PvuI	CGATCG	2 cut(s)	972, 1185
PvuII	CAGCTG	2 cut(s)	3308, 3432
RsaI	GTAC	8 cut(s)	709, 1107, 1320, 1533, 1746, 2728, 3399, 3425
RsaNI	GTAC	8 cut(s)	708, 1106, 1319, 1532, 1745, 2727, 3398, 3424
RseI	CAYNNNNRTG	1 cut(s)	1953
SacI	GAGCTC	1 cut(s)	3032
SatI	GCNGC	8 cut(s)	1098, 1311, 1524, 2710, 2855, 2938, 3430, 3433
Sau96I	GGNCC	8 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3105, 3160
SchI	GAGTC	4 cut(s)	214, 436, 2872, 3334
ScrFI	CCNGG	8 cut(s)	316, 342, 506, 1022, 1235, 1448, 1661, 2209
SduI	GDGCHC	4 cut(s)	51, 2976, 3032, 3205
SfaNI	GCATC	4 cut(s)	240, 2619, 2723, 3394
SfcI	CTRYAG	3 cut(s)	403, 489, 2157
SfuI	TTCGAA	2 cut(s)	444, 1034
SinI	GGWCC	7 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3160
SmiMI	CAYNNNNRTG	1 cut(s)	1953
SmlI	CTYRAG	9 cut(s)	92, 335, 730, 861, 1101, 1314, 1527, 1740, 2870
SmoI	CTYRAG	9 cut(s)	92, 335, 730, 861, 1101, 1314, 1527, 1740, 2870
SnaBI	TACGTA	1 cut(s)	3397
SsiI	CCGC	1 cut(s)	3077
SspI	AATATT	1 cut(s)	1703
SspMI	CTAG	9 cut(s)	789, 944, 1157, 1583, 2093, 2262, 2583, 2730, 3090
SstI	GAGCTC	1 cut(s)	3032
StyD4I	CCNGG	8 cut(s)	314, 340, 504, 1020, 1233, 1446, 1659, 2207
StyI	CCWWGG	6 cut(s)	907, 982, 1408, 1621, 1905, 3279
TaaI	ACNGT	2 cut(s)	70, 2106
TaiI	ACGT	6 cut(s)	452, 1492, 2260, 2446, 2935, 3399
TaqI	TCGA	6 cut(s)	430, 444, 1034, 1247, 2389, 2976
TaqII	GACCGA	2 cut(s)	179, 2674
TatI	WGTACW	1 cut(s)	2726
TscAI	CASTG	7 cut(s)	309, 419, 1140, 1779, 1977, 2205, 2562
TseFI	GTSAC	4 cut(s)	689, 2010, 2439, 3259
TseI	GCWGC	8 cut(s)	1097, 1310, 1523, 2709, 2854, 2937, 3429, 3432
Tsp45I	GTSAC	4 cut(s)	689, 2010, 2439, 3259
TspGWI	ACGGA	5 cut(s)	142, 450, 921, 3308, 3506
TspRI	CASTG	7 cut(s)	309, 419, 1140, 1779, 1977, 2205, 2562
Vha464I	CTTAAG	1 cut(s)	2870
VpaK11BI	GGWCC	7 cut(s)	938, 1151, 1364, 1577, 2397, 2686, 3160
XagI	CCTNNNNNAGG	3 cut(s)	1412, 1625, 2404
XmiI	GTMKAC	1 cut(s)	402
XmnI	GAANNNNTTC	3 cut(s)	101, 725, 2566
XspI	CTAG	9 cut(s)	789, 944, 1157, 1583, 2093, 2262, 2583, 2730, 3090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.