Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005748.1

Orthogroup ID

OG0004743

Physical Location & Seq

Genomic Coordinates Forward (+)

50087 .. 54073

Gene Structure 3987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005748.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3192 bp

atgggcgacgagaaagcgaaaacagtggttgaagaagagcccaaaatcccagtgttcacagtccttaagaacggagcgattctcaagaacatcttcatcgtcaacaaacccccaccaccgccacactccgaaccaatctcgtccgtccatcaagaaaccgaagaaatcttgatcgtcggacgccaccccgactgcaacatcgtgctgactcaccccagcgtcagcagattccacctccaaatcctctctaatccctcctcccacaagctttccctcaccgatttgtcatcagtccatgggacttggatctcggagaagaggattgagccaggggttcgagtagagctgaggcaaggggacacgctccgggttggtgcttctagcaggctctacaggcttcactggattcctttgagccacgcctatgaacaagacgcactcagggttctgaattgtttgccagttgaaaacgcagaacctgattgttctgatatgaattttgagggtatggagtctttattctctgatgaaaatatgggattaattcaacctccggtgcctcgaggaggagatcaaagtgaacaaggtgttgttgacaactcatcagaagatgattgtgaagagaaaaagatgtgtgagattccagaaatagaccaggttgtgaatattttgccaattgaaaaagcagaatttgaatctactgaatcaatttctgaggttatagaatctctagtctgtggtgataatttgggatttattgggcggaaggagatcccatcagcacctccaatgcctgaagaagaagaccgaagtgaacatggtggtgagaactcgtcaaaagttgttggccaagagaatgtgttgtcaagcttctgggcctttggaactgaatcggtgaacctgttttttcctcttgaagactcttcaaaggaaaaccagtacgtgcaactaagttgtgtcacaggaggttctgaattggaaaaagaaggagaagcttctcctactgttcagatattggaaaaagaccagggacagagtgatatctctggtctttcagctggaccttttgtgatagagaattcatccttgctgatccgagaagtccttgcggagacgaaacatcaacaaattgaagaagtaaacctgaccccagaaacaaaatcagacttgctggttaatcttgatggcaaaagctctataacgaaagaccatggacaggctgatcaattgtgtctatcttctgaacctcttgaatattctgttgacaaggaagagggtgcctatcctgctgcgcaaatacctgggagaaatgctgaccaaagctctttgagcaaagaccatggacagaatgataatgtcttgtgtctttcagctggaccttttgtgacggagaactcacccctgctggttggggaagtctttggggagatcaacaatcaacaaggtgaagaagaaaacccatcacaaaaacctaccttgctggttaacctggattttgagatttctgatgaaatcagatgtcttgttgatgaaagatgtggagaaactgaaaagagaagtgtgtcacccaaaaaccaccatgaaaagagggataccaaaaccatctcctctgtgcctcttgtcacagattctgtagactcattttcaccagacagggatctctcagagatactagatgacaaagagaaccagactccactatctatctgcactgcaggaggacagcctgaatcagaattctgtaatagccctcccgtgagatccgaagataagtcaatctttggagaaagcgtttgggaaagaagaggtaaacctgctagtgctgttaggattcaaacagagagaagcagagaaagaactactgtggaggcaggaattgataacgataatgaacaggaggtggaaagctttactccagacaaggagaatctaacaccaaatactcttcgtctgaggtccttgaaaaagaagtttgaggtagatattaagctggatgatactcaagaggagcaggaaatctttactcctgacaaggaaaacttcacaccaaatactcttcgactgaggtccttgaagaagaagggtaagctagaattaaccgattccaaatcccacagatcatccttgtcgaagcaaaacttaaattccaatatccctagagaagatctgcttgtatcgccggggaaagagaaccagaagttgaaggatatccaagaaagaaaatcagtagaaactactactgggaatcaagcaagggtggaaaaaaagttgatgctcacaagcagcacgaaaaggatgccattccaatcactacttaaaagttctgcaggcaagaacagcagatcagaagcttcagtccccgatgtagctactaaaagcagcacatttcttgcttgtagtcaaacaaaggagaaggtcaagaatccactctctaataaatttgctggagaaggaaagaggggctggactatagttgcagacactaatactctccttcacaaggaatcaaggaagtcattgcaacttctacaaggtcttaaggggactcatttgatcattccaagaatggttatacgggaactggattgcttgaaacagcgtggcagcctgttcagaaagaaaacagaggcttgtttggttctggaatggattgaagagtgtatggtaaaaacaaattggtggatccatgtccagagttcactggaagatggaagactgatcgctccaacccctcctgcttctccacagtctctatttagtgaggacagttggggacttacttctggaacaacaagctcgtttcccttcttaagatgtaggagttctatggaacttgtatcgccagcagcagaagatcatatacttgattgtgctcttttacataggaagatgagcaatgagggacaacttgttcttctaagtagtgacatcaccctgaagatcaaagccatggcagagggtttgatttgtgagacagctcaagaattccatgagagtctagtgaacccgtcttctgagaggtttatgtgggctggtagctgtccccgtgggcgtacttggtcctacttagctgacatagtgttggcggagaagtataatcgctgccaactgaagaagtcatcaaggggggaaggcgcaaaaggtctcaagctcattttgctccacaattctcagtatggacagatccattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004540 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006401 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008995 GO:0009056 GO:0009057 GO:0009555 GO:0009892 GO:0009987 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0016070 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019439 GO:0019888 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0034641 GO:0034655 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043666 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045936 GO:0046483 GO:0046700 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098772 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PIN_4

Protein Analysis

1063

Amino Acids

118.2

Weight (kDa)

5.12

Isoelectric Point (pI)

55.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34355 AT1G34355 AT1G34355
fragaria_vesca	FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232
malus_domestica	MD05G1040500.v1.1 MD10G1046600.v1.1
prunus_persica	Prupe.8G054200_v2.0.a1
pyrus_communis	pycom05g03310 pycom10g03280 pycom10g03290
rosa_chinensis	RchiOBHm_Chr6g0272171
rosa_laevigata	RLG00000013694
rosa_multiflora	Rmu_sc0005748.1_g000012
rosa_roxburghii	Rroxscaffold_7G00196530
rosa_rugosa	Rorug06G0066700
rosa_samantha	Rh6AG183500 Rh6BG183500 Rh6BG183600 Rh6CG184900 Rh6DG176600
rosa_wichuraiana	Rw6G015820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	561
Acc16I	TGCGCA	1 cut(s)	1293
Acc36I	ACCTGC	1 cut(s)	1822
AccB1I	GGYRCC	2 cut(s)	556, 1277
AccI	GTMKAC	1 cut(s)	1635
AciI	CCGC	4 cut(s)	119, 763, 1109, 3086
AclWI	GGATC	8 cut(s)	314, 766, 1087, 1665, 1755, 2677, 2690, 3178
AcoI	YGGCCR	1 cut(s)	847
AcsI	RAATTY	7 cut(s)	496, 689, 1078, 1736, 2143, 2438, 2984
AcuI	CTGAAG	4 cut(s)	816, 2337, 2957, 3131
AcyI	GRCGYC	1 cut(s)	181
AfaI	GTAC	2 cut(s)	941, 3055
AfiI	CCNNNNNNNGG	3 cut(s)	566, 1216, 2500
AflII	CTTAAG	3 cut(s)	65, 2537, 2809
AjnI	CCWGG	5 cut(s)	328, 654, 1026, 1300, 1488
AloI	GAACNNNNNNTCC	2 cut(s)	2895, 2927
Alw21I	GWGCWC	1 cut(s)	2875
Alw26I	GTCTC	4 cut(s)	1106, 2754, 2966, 3149
AlwI	GGATC	8 cut(s)	314, 766, 1087, 1665, 1755, 2677, 2690, 3178
AlwNI	CAGNNNCTG	2 cut(s)	479, 1631
Ama87I	CYCGRG	1 cut(s)	561
AoxI	GGCC	2 cut(s)	847, 876
ApeKI	GCWGC	6 cut(s)	1289, 2283, 2379, 2604, 2846, 3102
ApoI	RAATTY	7 cut(s)	496, 689, 1078, 1736, 2143, 2438, 2984
AseI	ATTAAT	1 cut(s)	542
Asp700I	GAANNNNTTC	1 cut(s)	92
AspLEI	GCGC	2 cut(s)	1294, 3137
AspS9I	GGNCC	6 cut(s)	876, 1061, 1376, 1956, 2067, 3060
AsuC2I	CCSGG	2 cut(s)	368, 2181
AvaI	CYCGRG	1 cut(s)	561
AvaII	GGWCC	5 cut(s)	1061, 1376, 1956, 2067, 3060
BalI	TGGCCA	1 cut(s)	849
BamHI	GGATCC	1 cut(s)	2682
BanI	GGYRCC	2 cut(s)	556, 1277
BanII	GRGCYC	1 cut(s)	42
BarI	GAAGNNNNNNTAC	2 cut(s)	2844, 2876
BbsI	GAAGAC	4 cut(s)	810, 924, 2719, 3003
Bbv12I	GWGCWC	1 cut(s)	2875
BbvCI	CCTCAGC	1 cut(s)	347
BbvI	GCAGC	6 cut(s)	1276, 2295, 2391, 2616, 2858, 3089
BccI	CCATC	6 cut(s)	156, 784, 1178, 1468, 1610, 2702
BcgI	CGANNNNNNTGC	2 cut(s)	2278, 2312
BciT130I	CCWGG	5 cut(s)	330, 656, 1028, 1302, 1490
BciVI	GTATCC	1 cut(s)	1585
BclI	TGATCA	2 cut(s)	1222, 2553
BcnI	CCSGG	2 cut(s)	368, 2181
BcoDI	GTCTC	4 cut(s)	1106, 2754, 2966, 3149
BfaI	CTAG	7 cut(s)	381, 731, 1673, 1818, 2090, 2157, 2999
BfmI	CTRYAG	5 cut(s)	391, 1632, 1713, 2325, 2469
BfrI	CTTAAG	3 cut(s)	65, 2537, 2809
BfuAI	ACCTGC	1 cut(s)	1822
BfuI	GTATCC	1 cut(s)	1585
BglII	AGATCT	1 cut(s)	2164
BisI	GCNGC	6 cut(s)	1290, 2284, 2380, 2605, 2847, 3103
BlsI	GCNGC	6 cut(s)	1291, 2285, 2381, 2606, 2848, 3104
Bme1390I	CCNGG	7 cut(s)	330, 368, 656, 1028, 1302, 1490, 2181
Bme18I	GGWCC	5 cut(s)	1061, 1376, 1956, 2067, 3060
BmeT110I	CYCGRG	1 cut(s)	561
BmgT120I	GGNCC	6 cut(s)	876, 1061, 1376, 1956, 2067, 3060
BmiI	GGNNCC	3 cut(s)	558, 1279, 2684
BmrFI	CCNGG	7 cut(s)	330, 368, 656, 1028, 1302, 1490, 2181
BmrI	ACTGGG	2 cut(s)	44, 2250
BmsI	GCATC	2 cut(s)	2262, 2286
BmuI	ACTGGG	2 cut(s)	44, 2250
BoxI	GACNNNNGTC	1 cut(s)	2065
BpiI	GAAGAC	4 cut(s)	810, 924, 2719, 3003
BplI	GAGNNNNNCTC	2 cut(s)	66, 98
BpmI	CTGGAG	2 cut(s)	1899, 2466
Bpu10I	CCTNAGC	1 cut(s)	347
BpuEI	CTTGAG	4 cut(s)	68, 1986, 2964, 3131
BpuMI	CCSGG	2 cut(s)	368, 2181
BsaAI	YACGTR	1 cut(s)	943
BsaHI	GRCGYC	1 cut(s)	181
BsaI	GGTCTC	1 cut(s)	3149
BsaJI	CCNNGG	9 cut(s)	295, 329, 1027, 1210, 1301, 1339, 2180, 2949, 3046
BsaWI	WCCGGW	1 cut(s)	553
BsaXI	ACNNNNNCTCC	2 cut(s)	1776, 1806
Bsc4I	CCNNNNNNNGG	3 cut(s)	566, 1216, 2500
Bse1I	ACTGG	7 cut(s)	50, 407, 461, 937, 2245, 2586, 2706
Bse3DI	GCAATG	2 cut(s)	2516, 2902
BseBI	CCWGG	5 cut(s)	330, 656, 1028, 1302, 1490
BseDI	CCNNGG	9 cut(s)	295, 329, 1027, 1210, 1301, 1339, 2180, 2949, 3046
BseGI	GGATG	4 cut(s)	1082, 1999, 2120, 2301
BseLI	CCNNNNNNNGG	3 cut(s)	566, 1216, 2500
BseMI	GCAATG	2 cut(s)	2516, 2902
BseMII	CTCAG	8 cut(s)	338, 454, 705, 1677, 1943, 2054, 3006, 3185
BseNI	ACTGG	7 cut(s)	50, 407, 461, 937, 2245, 2586, 2706
BseRI	GAGGAG	5 cut(s)	247, 579, 582, 1597, 2021
BseXI	GCAGC	6 cut(s)	1276, 2295, 2391, 2616, 2858, 3089
BseYI	CCCAGC	1 cut(s)	215
BsgI	GTGCAG	1 cut(s)	1693
BshFI	GGCC	2 cut(s)	849, 878
BshNI	GGYRCC	2 cut(s)	556, 1277
BsiHKAI	GWGCWC	1 cut(s)	2875
BsiHKCI	CYCGRG	1 cut(s)	561
BsiSI	CCGG	3 cut(s)	367, 554, 2180
BslFI	GGGAC	8 cut(s)	313, 371, 1044, 2342, 2557, 2787, 2916, 3027
BslI	CCNNNNNNNGG	3 cut(s)	566, 1216, 2500
BsmAI	GTCTC	4 cut(s)	1106, 2754, 2966, 3149
BsmBI	CGTCTC	1 cut(s)	1106
BsmFI	GGGAC	8 cut(s)	313, 371, 1044, 2342, 2557, 2787, 2916, 3027
BsnI	GGCC	2 cut(s)	849, 878
Bso31I	GGTCTC	1 cut(s)	3149
BsoBI	CYCGRG	1 cut(s)	561
Bsp1286I	GDGCHC	2 cut(s)	42, 2875
Bsp19I	CCATGG	4 cut(s)	295, 1210, 1339, 2949
BspACI	CCGC	4 cut(s)	119, 763, 1109, 3086
BspANI	GGCC	2 cut(s)	849, 878
BspCNI	CTCAG	8 cut(s)	339, 453, 706, 1676, 1944, 2055, 3007, 3184
BspLI	GGNNCC	3 cut(s)	558, 1279, 2684
BspMAI	CTGCAG	2 cut(s)	1717, 2329
BspMI	ACCTGC	1 cut(s)	1822
BspPI	GGATC	8 cut(s)	314, 766, 1087, 1665, 1755, 2677, 2690, 3178
BspQI	GCTCTTC	1 cut(s)	30
BspT107I	GGYRCC	2 cut(s)	556, 1277
BspTI	CTTAAG	3 cut(s)	65, 2537, 2809
BspTNI	GGTCTC	1 cut(s)	3149
BsrDI	GCAATG	2 cut(s)	2516, 2902
BsrI	ACTGG	7 cut(s)	50, 407, 461, 937, 2245, 2586, 2706
BssECI	CCNNGG	9 cut(s)	295, 329, 1027, 1210, 1301, 1339, 2180, 2949, 3046
BssNI	GRCGYC	1 cut(s)	181
BssT1I	CCWWGG	4 cut(s)	295, 1210, 1339, 2949
Bst2UI	CCWGG	5 cut(s)	330, 656, 1028, 1302, 1490
Bst4CI	ACNGT	6 cut(s)	25, 61, 1006, 1864, 2748, 2768
Bst6I	CTCTTC	9 cut(s)	30, 311, 615, 928, 1266, 1798, 1950, 2061, 2649
BstACI	GRCGYC	1 cut(s)	181
BstAFI	CTTAAG	3 cut(s)	65, 2537, 2809
BstBAI	YACGTR	1 cut(s)	943
BstC8I	GCNNGC	3 cut(s)	386, 2329, 2844
BstDSI	CCRYGG	5 cut(s)	295, 1210, 1339, 2949, 3046
BstENI	CCTNNNNNAGG	2 cut(s)	564, 2498
BstF5I	GGATG	4 cut(s)	1082, 1999, 2120, 2301
BstHHI	GCGC	2 cut(s)	1294, 3137
BstMAI	GTCTC	4 cut(s)	1106, 2754, 2966, 3149
BstMWI	GCNNNNNNNGC	6 cut(s)	394, 1286, 1329, 2176, 2337, 3157
BstNI	CCWGG	5 cut(s)	330, 656, 1028, 1302, 1490
BstPAI	GACNNNNGTC	1 cut(s)	2065
BstSCI	CCNGG	7 cut(s)	328, 366, 654, 1026, 1300, 1488, 2179
BstSFI	CTRYAG	5 cut(s)	391, 1632, 1713, 2325, 2469
BstV1I	GCAGC	6 cut(s)	1276, 2295, 2391, 2616, 2858, 3089
BstV2I	GAAGAC	4 cut(s)	810, 924, 2719, 3003
BstX2I	RGATCY	7 cut(s)	306, 771, 1657, 1760, 2164, 2682, 3183
BstYI	RGATCY	7 cut(s)	306, 771, 1657, 1760, 2164, 2682, 3183
BsuI	GTATCC	1 cut(s)	1585
BsuRI	GGCC	2 cut(s)	849, 878
BtgI	CCRYGG	5 cut(s)	295, 1210, 1339, 2949, 3046
BtsCI	GGATG	4 cut(s)	1082, 1999, 2120, 2301
BtsI	GCAGTG	1 cut(s)	1710
BtsIMutI	CAGTG	5 cut(s)	30, 57, 400, 1710, 2699
BveI	ACCTGC	1 cut(s)	1822
Cac8I	GCNNGC	3 cut(s)	386, 2329, 2844
CaiI	CAGNNNCTG	2 cut(s)	479, 1631
CfoI	GCGC	2 cut(s)	1294, 3137
Cfr13I	GGNCC	6 cut(s)	876, 1061, 1376, 1956, 2067, 3060
CseI	GACGC	3 cut(s)	189, 208, 443
CsiI	ACCWGGT	1 cut(s)	654
Csp6I	GTAC	2 cut(s)	940, 3054
CviAII	CATG	8 cut(s)	296, 818, 1211, 1340, 1580, 2687, 2950, 2990
CviQI	GTAC	2 cut(s)	940, 3054
EaeI	YGGCCR	1 cut(s)	847
Eam1104I	CTCTTC	9 cut(s)	30, 311, 615, 928, 1266, 1798, 1950, 2061, 2649
EarI	CTCTTC	9 cut(s)	30, 311, 615, 928, 1266, 1798, 1950, 2061, 2649
EciI	GGCGGA	2 cut(s)	778, 3101
Eco130I	CCWWGG	4 cut(s)	295, 1210, 1339, 2949
Eco24I	GRGCYC	1 cut(s)	42
Eco31I	GGTCTC	1 cut(s)	3149
Eco32I	GATATC	2 cut(s)	1042, 2209
Eco47I	GGWCC	5 cut(s)	1061, 1376, 1956, 2067, 3060
Eco57I	CTGAAG	4 cut(s)	816, 2337, 2957, 3131
Eco88I	CYCGRG	1 cut(s)	561
EcoNI	CCTNNNNNAGG	2 cut(s)	564, 2498
EcoO109I	RGGNCCY	2 cut(s)	1956, 2067
EcoRI	GAATTC	3 cut(s)	1078, 1736, 2984
EcoRII	CCWGG	5 cut(s)	328, 654, 1026, 1300, 1488
EcoRV	GATATC	2 cut(s)	1042, 2209
EcoT14I	CCWWGG	4 cut(s)	295, 1210, 1339, 2949
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	4 cut(s)	295, 1210, 1339, 2949
Esp3I	CGTCTC	1 cut(s)	1106
FaeI	CATG	8 cut(s)	299, 821, 1214, 1343, 1583, 2690, 2953, 2993
FaqI	GGGAC	8 cut(s)	313, 371, 1044, 2342, 2557, 2787, 2916, 3027
FatI	CATG	8 cut(s)	295, 817, 1210, 1339, 1579, 2686, 2949, 2989
FbaI	TGATCA	2 cut(s)	1222, 2553
FblI	GTMKAC	1 cut(s)	1635
Fnu4HI	GCNGC	6 cut(s)	1290, 2284, 2380, 2605, 2847, 3103
FokI	GGATG	4 cut(s)	1069, 2006, 2107, 2308
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	6 cut(s)	1290, 2284, 2380, 2605, 2847, 3103
FspBI	CTAG	7 cut(s)	381, 731, 1673, 1818, 2090, 2157, 2999
FspI	TGCGCA	1 cut(s)	1293
GlaI	GCGC	2 cut(s)	1293, 3136
GluI	GCNGC	6 cut(s)	1290, 2284, 2380, 2605, 2847, 3103
GsaI	CCCAGC	1 cut(s)	219
GsuI	CTGGAG	2 cut(s)	1899, 2466
HaeIII	GGCC	2 cut(s)	849, 878
HapII	CCGG	3 cut(s)	367, 554, 2180
HgaI	GACGC	3 cut(s)	189, 208, 443
HhaI	GCGC	2 cut(s)	1294, 3137
Hin1I	GRCGYC	1 cut(s)	181
Hin1II	CATG	8 cut(s)	299, 821, 1214, 1343, 1583, 2690, 2953, 2993
Hin6I	GCGC	2 cut(s)	1292, 3135
HinP1I	GCGC	2 cut(s)	1292, 3135
HincII	GTYRAC	4 cut(s)	103, 595, 1264, 1486
HindII	GTYRAC	4 cut(s)	103, 595, 1264, 1486
HindIII	AAGCTT	5 cut(s)	266, 868, 993, 1906, 2349
HpaI	GTTAAC	1 cut(s)	1486
HpaII	CCGG	3 cut(s)	367, 554, 2180
Hpy99I	CGWCG	2 cut(s)	11, 179
HpyAV	CCTTC	9 cut(s)	760, 980, 2074, 2197, 2407, 2444, 2504, 2815, 3125
HpyCH4III	ACNGT	6 cut(s)	25, 61, 1006, 1864, 2748, 2768
HpyCH4IV	ACGT	1 cut(s)	942
HpyCH4V	TGCA	7 cut(s)	195, 946, 1710, 1715, 2327, 2477, 2521
HpyF10VI	GCNNNNNNNGC	6 cut(s)	394, 1286, 1329, 2176, 2337, 3157
HpySE526I	ACGT	1 cut(s)	942
Hsp92I	GRCGYC	1 cut(s)	181
Hsp92II	CATG	8 cut(s)	299, 821, 1214, 1343, 1583, 2690, 2953, 2993
HspAI	GCGC	2 cut(s)	1292, 3135
Ksp22I	TGATCA	2 cut(s)	1222, 2553
KspAI	GTTAAC	1 cut(s)	1486
LguI	GCTCTTC	1 cut(s)	30
LmnI	GCTCC	5 cut(s)	74, 369, 2008, 2728, 3165
Lsp1109I	GCAGC	6 cut(s)	1276, 2295, 2391, 2616, 2858, 3089
LweI	GCATC	2 cut(s)	2262, 2286
MabI	ACCWGGT	1 cut(s)	654
MaeI	CTAG	7 cut(s)	381, 731, 1673, 1818, 2090, 2157, 2999
MaeII	ACGT	1 cut(s)	942
MaeIII	GTNAC	5 cut(s)	958, 1384, 1563, 1621, 2924
MfeI	CAATTG	2 cut(s)	675, 1226
MflI	RGATCY	7 cut(s)	306, 771, 1657, 1760, 2164, 2682, 3183
MhlI	GDGCHC	2 cut(s)	42, 2875
MlsI	TGGCCA	1 cut(s)	849
MluNI	TGGCCA	1 cut(s)	849
MlyI	GAGTC	7 cut(s)	202, 521, 914, 1631, 1687, 2539, 3004
MmeI	TCCRAC	2 cut(s)	157, 2750
Mox20I	TGGCCA	1 cut(s)	849
MroXI	GAANNNNTTC	1 cut(s)	92
MscI	TGGCCA	1 cut(s)	849
MslI	CAYNNNNRTG	2 cut(s)	423, 822
Msp20I	TGGCCA	1 cut(s)	849
MspA1I	CMGCKG	2 cut(s)	1058, 1373
MspCI	CTTAAG	3 cut(s)	65, 2537, 2809
MspI	CCGG	3 cut(s)	367, 554, 2180
MspR9I	CCNGG	7 cut(s)	330, 368, 656, 1028, 1302, 1490, 2181
MunI	CAATTG	2 cut(s)	675, 1226
MvaI	CCWGG	5 cut(s)	330, 656, 1028, 1302, 1490
MwoI	GCNNNNNNNGC	6 cut(s)	394, 1286, 1329, 2176, 2337, 3157
NciI	CCSGG	2 cut(s)	368, 2181
NcoI	CCATGG	4 cut(s)	295, 1210, 1339, 2949
NlaIII	CATG	8 cut(s)	299, 821, 1214, 1343, 1583, 2690, 2953, 2993
NlaIV	GGNNCC	3 cut(s)	558, 1279, 2684
NmuCI	GTSAC	5 cut(s)	958, 1384, 1563, 1621, 2924
NsbI	TGCGCA	1 cut(s)	1293
PaeR7I	CTCGAG	1 cut(s)	561
PciSI	GCTCTTC	1 cut(s)	30
PdmI	GAANNNNTTC	1 cut(s)	92
PkrI	GCNGC	6 cut(s)	1291, 2285, 2381, 2606, 2848, 3104
PleI	GAGTC	7 cut(s)	202, 520, 914, 1631, 1687, 2539, 3003
PpsI	GAGTC	7 cut(s)	202, 520, 914, 1631, 1687, 2539, 3003
Ppu21I	YACGTR	1 cut(s)	943
PpuMI	RGGWCCY	2 cut(s)	1956, 2067
PshAI	GACNNNNGTC	1 cut(s)	2065
PshBI	ATTAAT	1 cut(s)	542
Psp5II	RGGWCCY	2 cut(s)	1956, 2067
Psp6I	CCWGG	5 cut(s)	328, 654, 1026, 1300, 1488
PspFI	CCCAGC	1 cut(s)	215
PspGI	CCWGG	5 cut(s)	328, 654, 1026, 1300, 1488
PspN4I	GGNNCC	3 cut(s)	558, 1279, 2684
PspPI	GGNCC	6 cut(s)	876, 1061, 1376, 1956, 2067, 3060
PspPPI	RGGWCCY	2 cut(s)	1956, 2067
PspXI	VCTCGAGB	1 cut(s)	561
PstI	CTGCAG	2 cut(s)	1717, 2329
PstNI	CAGNNNCTG	2 cut(s)	479, 1631
PsuI	RGATCY	7 cut(s)	306, 771, 1657, 1760, 2164, 2682, 3183
PvuII	CAGCTG	2 cut(s)	1058, 1373
RsaI	GTAC	2 cut(s)	941, 3055
RsaNI	GTAC	2 cut(s)	940, 3054
RseI	CAYNNNNRTG	2 cut(s)	423, 822
SapI	GCTCTTC	1 cut(s)	30
SatI	GCNGC	6 cut(s)	1290, 2284, 2380, 2605, 2847, 3103
Sau96I	GGNCC	6 cut(s)	876, 1061, 1376, 1956, 2067, 3060
SchI	GAGTC	7 cut(s)	202, 521, 914, 1631, 1687, 2539, 3004
ScrFI	CCNGG	7 cut(s)	330, 368, 656, 1028, 1302, 1490, 2181
SduI	GDGCHC	2 cut(s)	42, 2875
SexAI	ACCWGGT	1 cut(s)	654
SfaNI	GCATC	2 cut(s)	2262, 2286
SfcI	CTRYAG	5 cut(s)	391, 1632, 1713, 2325, 2469
Sfr274I	CTCGAG	1 cut(s)	561
SinI	GGWCC	5 cut(s)	1061, 1376, 1956, 2067, 3060
SlaI	CTCGAG	1 cut(s)	561
SmiMI	CAYNNNNRTG	2 cut(s)	423, 822
SmlI	CTYRAG	8 cut(s)	65, 83, 561, 2001, 2537, 2809, 2979, 3146
SmoI	CTYRAG	8 cut(s)	65, 83, 561, 2001, 2537, 2809, 2979, 3146
SsiI	CCGC	4 cut(s)	119, 763, 1109, 3086
SspI	AATATT	2 cut(s)	667, 1256
SspMI	CTAG	7 cut(s)	381, 731, 1673, 1818, 2090, 2157, 2999
StyD4I	CCNGG	7 cut(s)	328, 366, 654, 1026, 1300, 1488, 2179
StyI	CCWWGG	4 cut(s)	295, 1210, 1339, 2949
TaaI	ACNGT	6 cut(s)	25, 61, 1006, 1864, 2748, 2768
TaiI	ACGT	1 cut(s)	945
TaqI	TCGA	4 cut(s)	337, 562, 2059, 2129
TaqII	GACCGA	1 cut(s)	822
TscAI	CASTG	5 cut(s)	30, 57, 407, 1717, 2706
TseFI	GTSAC	5 cut(s)	958, 1384, 1563, 1621, 2924
TseI	GCWGC	6 cut(s)	1289, 2283, 2379, 2604, 2846, 3102
Tsp45I	GTSAC	5 cut(s)	958, 1384, 1563, 1621, 2924
TspDTI	ATGAA	9 cut(s)	85, 441, 509, 543, 1071, 1524, 1545, 1596, 1905
TspGWI	ACGGA	3 cut(s)	87, 133, 1403
TspRI	CASTG	5 cut(s)	30, 57, 407, 1717, 2706
Vha464I	CTTAAG	3 cut(s)	65, 2537, 2809
VpaK11BI	GGWCC	5 cut(s)	1061, 1376, 1956, 2067, 3060
VspI	ATTAAT	1 cut(s)	542
XagI	CCTNNNNNAGG	2 cut(s)	564, 2498
XapI	RAATTY	7 cut(s)	496, 689, 1078, 1736, 2143, 2438, 2984
XhoI	CTCGAG	1 cut(s)	561
XmiI	GTMKAC	1 cut(s)	1635
XmnI	GAANNNNTTC	1 cut(s)	92
XspI	CTAG	7 cut(s)	381, 731, 1673, 1818, 2090, 2157, 2999

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.