Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0004743

Physical Location & Seq

Genomic Coordinates Reverse (-)

29803846 .. 29807691

Gene Structure 3846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG184900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

ATGGGCGACGAGAAAGCGAAAACAGTGGTTGAAGAAGAGCCCAAAATCCCAGTGTTCACAGTCCTTAAGAACGGAGCGATTCTCAAGAACATCTTCATCGTCAACAAACCCCCACCACCGCCACACTCCGAACCAATCTCGTCCGTCCATCAAGAAACCGAAGAAATCTTGATCGTCGGACGCCACCCCGACTGCAACATCGTGCTGACTCACCCCAGCGTCAGCAGATTCCACCTCCAAATCCTCTCTAATCCCTCCTCCCACAAGCTTTCCCTCACCGATTTATCATCAGTCCATGGGACTTGGATCTCGGAGAAGAGGATTGAGCCAGGGGTTCGAGTAGAGCTGAGGCAAGGGGACACGCTCCGGGTTGGTGCTTCTAGCAGGCTCTACAGGCTTCACTGGATTCCTTTGAGCCACGCCTATGAACAAGACGCACTCAGGGTTCTGAATTGTTTGCCAGTTGAAACCGCAGAACCTGATTGTTCTGATATGAATTTTGAGGGTATGGAGTCTTTATTCTCTGATGAAAATATGGGATTAATTCAACCTCCGGTGCCTCGAGGAGGAGATCAAAGTGAACAAGGTGTTGACAACTCATCAGAAGATGATTGTCAAGAGAAAAAGATGTGTGAGATTCCAGAAATAGACCAGGTTGTGAATATTTTGCCAATTGAAAAAGCAGAATTTGAATCTACTGAATCAATTTCTGAGGTTATAGAATCTCTAGTCTGTGGTGATAATTTGGGATTTATTGGGCGGAAGGAGATCCCATCAGCACCTCCAATGCCTGAAGAAGAAGAAGACCGAAGTGAACATGGTGGTGAGAACTCGTCAAAAGTTGTTGGCCAAGAGAATGTGTTGTCAAGCTTCTGGGCCTTTGGAACTGAATCGGTGAACCTGTTTTTTCCTCTTGAAGACTCTTCAAAGGAAAACCAGTACGTGCAACTAAGTTGTGTCACAGGAGGTTCTGAATTGGAAAAAGACCAGGGACAGAGTGATATCTCTGGCCTTTCAGCTGGACCTTTTGTGATAGAGAATTCATCCTTGCTGATCCGAGAAGTCCTTGCGGAGACGAAACATCAACAAATTGAAGAAGTAAACCTGACCCCAGAAACAAAATCAGACTTGCTGGTTAATCTTGATGGCAAAAGCTCTATAACGAAAGACCATGGACAGGCTGATCAATTGTGTCTATCTTCTGAACCTCTTGAATATTCTGTTGACAAGGAAGAGGGTGCCTATCCTGCTGCGCAAATACCTGGGAGAAATGCTGACCAAAGCTCTTTGAGCAAAGACCATGGACAGAATGATAATGTCTTGTGTCTTTCAGCTGGACCTTTTGTGACGGAGAACTCATCCTTGCTGGTTGGGGAAGTCCTTGGGGAGATCAACAATCAACAAGGTGAAGAAGAAAACCCATCACAAAAACCAACCTTGCTGGTTAACCTGGATTTTGAGATTTCTAATGAAATCAGATGTCTTGTTGATGAAAGACGTGGAGAAACTGAAAAGAGAAGTGTGTCATCCAAAAACCACCATGGAAAGAGGGATACCAAAACCAGCTCCTCTGTGCCTCTTGTCACAGATTCTGTAGACTCATTTTCACCAGACAGGGATCTCTCAGAGATAATAGATGACAAACAGAACCAGACTCCACTATCTATCTGCACTGCAGGAGGACAGCCTGAATCAGAATTCTGTAATAGCCCTCCCCTGAGATCTGAAGATAAGTCGATCTTTGGAGAAAGCATTTGGGAAAGAAGAGGTAAACCTGCTAGTGCTGTTAGGATTCAAACAGAGAGAAGCAGAGAAAAAACTACTGTGGAGGCAGGAATTGATAACGATAATGAACAGGAGGTGGAAACCTTTACTCCAGACAAGGAGAATCTAACACCAAATACTCTTCGTCTGAGGTCCTTGAAAAAGAAGTTTGAGGTAGAAATTAAGCTGGATGATACTGAAGAGGAGCGGGAAATCTTTACTCCTGACAAGGAAAACTTCACACCAAATAATCTTCGACTGGGGTCCTTGAAGAAGAAGGGTAAGCTAGAATTAACCGATTCCAAATCCCACAGATCATCCTTGTTGAAGCAAAACTTAAATTCCAATATCCCTAGAGAAGATCTGCTTGTATCGCCAGGGAAAGAGAACCAGATATTGAAGGATATCCAAGAAAGAAAATCAGTAGAAACTACTACTGGGAATCAAGCAAGGCTGGAAAAAAAGTTGATGCTCACAAGCAGCACGAAAAGGATGCCATTCCAATCACTACTTCCAGGCAAGAACATCAGATCAGAAGCTTCAGTCCCCGATGTAGCTACTAAAAGCAGCACATTTCTTGCTTGTAGTCGAACAAAGGAGAAGGTCAAGAATCCACTCTCTAATAAATTTGTTGGAGAAGGAAAGAGGGGCTGGACTATGGTTGCAGACACTAATACTCTCCTTCACAAGCAATCAAGGAAGTCATTGCAACTTCTACAAGGTCTTAAGGGGACTCATTTGATCATTCCAAGAATGGTTATACGGGAACTGGATTGCCTGAAACAGCGTGGCAGCCTGTTCAGAAAGAAAACAGAGGCTTGTTTGGTTCTGGAATGGATTGAAGAGTGTATGGTAAAAACAAATTGGTGGATCCATGTCCAGAGTTCACTGGAAGATGGAAGACTGATCGCTCCAACCCCTCCTGCTTCTCCACAGTCTCTATTTAGTGAGGACAGTTGGGGACTTACTTCTGGAACAACAAGCTCGTTTCCCTTCTTAAGATGGAGGAGTTCTATGGAACTTGTATCGCCAGCAGCAGAAGATCATATACTTGATTGTGCTCTTTTACATAGGAAGATGAGCAATGAGGGACAACTTGTTCTTCTAAGTAGTGACATCACCCTGAAGATCAAAGCCATGGCAGAGGGTTTGATTTGTGAGACAGCTCAAGAATTCCATGAGAGTCTAGTGAACCCGTCTTCTGAGAGGTTTATGTGGGCTGGTAGCTGTCCCCGTGGGCGTACTTGGTCCTACTTAGCTGACATAGTTTTGGCGGAGAAGTATAATCGCTGCCAACTGAAGAAGTCATCAAGGGGAGAAGGCGCAAAAGGTCTCAAGCTCATTTTGCTCCACAATTCTCAGTATGGACAGATCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004540 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006401 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008995 GO:0009056 GO:0009057 GO:0009555 GO:0009892 GO:0009987 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0016070 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019439 GO:0019888 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0034641 GO:0034655 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043666 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045936 GO:0046483 GO:0046700 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098772 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PIN_4

Protein Analysis

1047

Amino Acids

116.64

Weight (kDa)

5.21

Isoelectric Point (pI)

57.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	54 - 126	1.5e-08	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	58 - 125	8.5e-17	FHA domain
PIN_4	PF13638	808 - 977	7.4e-20	PIN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34355 AT1G34355 AT1G34355
fragaria_vesca	FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232
malus_domestica	MD05G1040500.v1.1 MD10G1046600.v1.1
prunus_persica	Prupe.8G054200_v2.0.a1
pyrus_communis	pycom05g03310 pycom10g03280 pycom10g03290
rosa_chinensis	RchiOBHm_Chr6g0272171
rosa_laevigata	RLG00000013694
rosa_multiflora	Rmu_sc0005748.1_g000012
rosa_roxburghii	Rroxscaffold_7G00196530
rosa_rugosa	Rorug06G0066700
rosa_samantha	Rh6AG183500 Rh6BG183500 Rh6BG183600 Rh6CG184900 Rh6DG176600
rosa_wichuraiana	Rw6G015820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	561
Acc16I	TGCGCA	1 cut(s)	1254
Acc36I	ACCTGC	1 cut(s)	1783
AccB1I	GGYRCC	2 cut(s)	556, 1238
AccBSI	CCGCTC	1 cut(s)	1972
AccI	GTMKAC	1 cut(s)	1596
AciI	CCGC	6 cut(s)	119, 471, 760, 1070, 1972, 3038
AclWI	GGATC	7 cut(s)	314, 763, 1048, 1626, 2629, 2642, 3130
AcoI	YGGCCR	1 cut(s)	847
AcsI	RAATTY	7 cut(s)	496, 686, 1039, 1697, 2104, 2390, 2936
AcuI	CTGAAG	6 cut(s)	813, 1746, 1983, 2289, 2909, 3083
AcyI	GRCGYC	1 cut(s)	181
AfaI	GTAC	2 cut(s)	941, 3007
AfiI	CCNNNNNNNGG	2 cut(s)	566, 1177
AflII	CTTAAG	3 cut(s)	65, 2489, 2761
AjiI	CACGTC	1 cut(s)	1499
AjnI	CCWGG	7 cut(s)	328, 651, 987, 1261, 1449, 2140, 2278
AjuI	GAANNNNNNNTTGG	2 cut(s)	2259, 2291
AloI	GAACNNNNNNTCC	2 cut(s)	2847, 2879
Alw21I	GWGCWC	1 cut(s)	2827
Alw26I	GTCTC	4 cut(s)	1067, 2706, 2918, 3101
AlwI	GGATC	7 cut(s)	314, 763, 1048, 1626, 2629, 2642, 3130
AlwNI	CAGNNNCTG	2 cut(s)	479, 1592
Ama87I	CYCGRG	1 cut(s)	561
AoxI	GGCC	3 cut(s)	847, 876, 1009
ApeKI	GCWGC	6 cut(s)	1250, 2244, 2331, 2556, 2798, 3054
ApoI	RAATTY	7 cut(s)	496, 686, 1039, 1697, 2104, 2390, 2936
AseI	ATTAAT	1 cut(s)	542
Asp700I	GAANNNNTTC	1 cut(s)	92
AspLEI	GCGC	2 cut(s)	1255, 3089
AspS9I	GGNCC	6 cut(s)	876, 1022, 1337, 1917, 2028, 3012
AsuC2I	CCSGG	1 cut(s)	368
AsuHPI	GGTGA	8 cut(s)	203, 268, 749, 836, 907, 1418, 1599, 2875
AvaI	CYCGRG	1 cut(s)	561
AvaII	GGWCC	5 cut(s)	1022, 1337, 1917, 2028, 3012
BalI	TGGCCA	1 cut(s)	849
BamHI	GGATCC	1 cut(s)	2634
BanI	GGYRCC	2 cut(s)	556, 1238
BanII	GRGCYC	1 cut(s)	42
BarI	GAAGNNNNNNTAC	2 cut(s)	2796, 2828
BbsI	GAAGAC	4 cut(s)	810, 924, 2671, 2955
Bbv12I	GWGCWC	1 cut(s)	2827
BbvCI	CCTCAGC	1 cut(s)	347
BbvI	GCAGC	6 cut(s)	1237, 2256, 2343, 2568, 2810, 3041
BccI	CCATC	6 cut(s)	156, 781, 1139, 1429, 2654, 2760
BcgI	CGANNNNNNTGC	2 cut(s)	2239, 2273
BciT130I	CCWGG	7 cut(s)	330, 653, 989, 1263, 1451, 2142, 2280
BciVI	GTATCC	1 cut(s)	1546
BclI	TGATCA	2 cut(s)	1183, 2505
BcnI	CCSGG	1 cut(s)	368
BcoDI	GTCTC	4 cut(s)	1067, 2706, 2918, 3101
BfaI	CTAG	6 cut(s)	381, 728, 1779, 2051, 2118, 2951
BfmI	CTRYAG	3 cut(s)	391, 1593, 1674
BfrI	CTTAAG	3 cut(s)	65, 2489, 2761
BfuAI	ACCTGC	1 cut(s)	1783
BfuI	GTATCC	1 cut(s)	1546
BglII	AGATCT	2 cut(s)	1721, 2125
BisI	GCNGC	6 cut(s)	1251, 2245, 2332, 2557, 2799, 3055
BlsI	GCNGC	6 cut(s)	1252, 2246, 2333, 2558, 2800, 3056
Bme1390I	CCNGG	8 cut(s)	330, 368, 653, 989, 1263, 1451, 2142, 2280
Bme18I	GGWCC	5 cut(s)	1022, 1337, 1917, 2028, 3012
BmeT110I	CYCGRG	1 cut(s)	561
BmgBI	CACGTC	1 cut(s)	1499
BmgT120I	GGNCC	6 cut(s)	876, 1022, 1337, 1917, 2028, 3012
BmiI	GGNNCC	4 cut(s)	558, 1240, 2029, 2636
BmrFI	CCNGG	8 cut(s)	330, 368, 653, 989, 1263, 1451, 2142, 2280
BmrI	ACTGGG	3 cut(s)	44, 2033, 2211
BmsI	GCATC	2 cut(s)	2223, 2247
BmuI	ACTGGG	3 cut(s)	44, 2033, 2211
BoxI	GACNNNNGTC	1 cut(s)	2026
BpiI	GAAGAC	4 cut(s)	810, 924, 2671, 2955
BplI	GAGNNNNNCTC	2 cut(s)	66, 98
BpmI	CTGGAG	1 cut(s)	1860
Bpu10I	CCTNAGC	1 cut(s)	347
BpuEI	CTTGAG	3 cut(s)	68, 2916, 3083
BpuMI	CCSGG	1 cut(s)	368
BsaAI	YACGTR	1 cut(s)	943
BsaHI	GRCGYC	1 cut(s)	181
BsaI	GGTCTC	1 cut(s)	3101
BsaWI	WCCGGW	1 cut(s)	553
BsaXI	ACNNNNNCTCC	2 cut(s)	1858, 1888
Bsc4I	CCNNNNNNNGG	2 cut(s)	566, 1177
Bse1I	ACTGG	8 cut(s)	50, 407, 461, 937, 2028, 2206, 2538, 2658
Bse3DI	GCAATG	2 cut(s)	2468, 2854
BseBI	CCWGG	7 cut(s)	330, 653, 989, 1263, 1451, 2142, 2280
BseGI	GGATG	6 cut(s)	1043, 1358, 1526, 1960, 2081, 2262
BseLI	CCNNNNNNNGG	2 cut(s)	566, 1177
BseMI	GCAATG	2 cut(s)	2468, 2854
BseMII	CTCAG	8 cut(s)	338, 454, 702, 1638, 1709, 1904, 2958, 3137
BseNI	ACTGG	8 cut(s)	50, 407, 461, 937, 2028, 2206, 2538, 2658
BseRI	GAGGAG	6 cut(s)	247, 579, 582, 1558, 1982, 2785
BseXI	GCAGC	6 cut(s)	1237, 2256, 2343, 2568, 2810, 3041
BseYI	CCCAGC	1 cut(s)	215
BsgI	GTGCAG	1 cut(s)	1654
BshFI	GGCC	3 cut(s)	849, 878, 1011
BshNI	GGYRCC	2 cut(s)	556, 1238
BsiHKAI	GWGCWC	1 cut(s)	2827
BsiHKCI	CYCGRG	1 cut(s)	561
BsiSI	CCGG	2 cut(s)	367, 554
BslFI	GGGAC	8 cut(s)	313, 371, 1005, 2294, 2509, 2739, 2868, 2979
BslI	CCNNNNNNNGG	2 cut(s)	566, 1177
BsmAI	GTCTC	4 cut(s)	1067, 2706, 2918, 3101
BsmBI	CGTCTC	1 cut(s)	1067
BsmFI	GGGAC	8 cut(s)	313, 371, 1005, 2294, 2509, 2739, 2868, 2979
BsnI	GGCC	3 cut(s)	849, 878, 1011
Bso31I	GGTCTC	1 cut(s)	3101
BsoBI	CYCGRG	1 cut(s)	561
Bsp1286I	GDGCHC	2 cut(s)	42, 2827
Bsp19I	CCATGG	5 cut(s)	295, 1171, 1300, 1540, 2901
BspACI	CCGC	6 cut(s)	119, 471, 760, 1070, 1972, 3038
BspANI	GGCC	3 cut(s)	849, 878, 1011
BspCNI	CTCAG	8 cut(s)	339, 453, 703, 1637, 1710, 1905, 2959, 3136
BspLI	GGNNCC	4 cut(s)	558, 1240, 2029, 2636
BspMAI	CTGCAG	1 cut(s)	1678
BspMI	ACCTGC	1 cut(s)	1783
BspPI	GGATC	7 cut(s)	314, 763, 1048, 1626, 2629, 2642, 3130
BspQI	GCTCTTC	1 cut(s)	30
BspT107I	GGYRCC	2 cut(s)	556, 1238
BspTI	CTTAAG	3 cut(s)	65, 2489, 2761
BspTNI	GGTCTC	1 cut(s)	3101
BsrBI	CCGCTC	1 cut(s)	1972
BsrDI	GCAATG	2 cut(s)	2468, 2854
BsrI	ACTGG	8 cut(s)	50, 407, 461, 937, 2028, 2206, 2538, 2658
BssNI	GRCGYC	1 cut(s)	181
BssT1I	CCWWGG	6 cut(s)	295, 1171, 1300, 1381, 1540, 2901
Bst2UI	CCWGG	7 cut(s)	330, 653, 989, 1263, 1451, 2142, 2280
Bst4CI	ACNGT	5 cut(s)	25, 61, 1825, 2700, 2720
Bst6I	CTCTTC	8 cut(s)	30, 311, 928, 1227, 1759, 1911, 1959, 2601
BstACI	GRCGYC	1 cut(s)	181
BstAFI	CTTAAG	3 cut(s)	65, 2489, 2761
BstBAI	YACGTR	1 cut(s)	943
BstC8I	GCNNGC	2 cut(s)	386, 2796
BstDSI	CCRYGG	6 cut(s)	295, 1171, 1300, 1540, 2901, 2998
BstENI	CCTNNNNNAGG	1 cut(s)	564
BstF5I	GGATG	6 cut(s)	1043, 1358, 1526, 1960, 2081, 2262
BstHHI	GCGC	2 cut(s)	1255, 3089
BstMAI	GTCTC	4 cut(s)	1067, 2706, 2918, 3101
BstMWI	GCNNNNNNNGC	5 cut(s)	394, 1247, 1290, 2137, 3109
BstNI	CCWGG	7 cut(s)	330, 653, 989, 1263, 1451, 2142, 2280
BstPAI	GACNNNNGTC	1 cut(s)	2026
BstSCI	CCNGG	8 cut(s)	328, 366, 651, 987, 1261, 1449, 2140, 2278
BstSFI	CTRYAG	3 cut(s)	391, 1593, 1674
BstV1I	GCAGC	6 cut(s)	1237, 2256, 2343, 2568, 2810, 3041
BstV2I	GAAGAC	4 cut(s)	810, 924, 2671, 2955
BstX2I	RGATCY	7 cut(s)	306, 768, 1618, 1721, 2125, 2634, 3135
BstYI	RGATCY	7 cut(s)	306, 768, 1618, 1721, 2125, 2634, 3135
BsuI	GTATCC	1 cut(s)	1546
BsuRI	GGCC	3 cut(s)	849, 878, 1011
BtgI	CCRYGG	6 cut(s)	295, 1171, 1300, 1540, 2901, 2998
BtrI	CACGTC	1 cut(s)	1499
BtsCI	GGATG	6 cut(s)	1043, 1358, 1526, 1960, 2081, 2262
BtsI	GCAGTG	1 cut(s)	1671
BtsIMutI	CAGTG	5 cut(s)	30, 57, 400, 1671, 2651
BveI	ACCTGC	1 cut(s)	1783
Cac8I	GCNNGC	2 cut(s)	386, 2796
CaiI	CAGNNNCTG	2 cut(s)	479, 1592
CfoI	GCGC	2 cut(s)	1255, 3089
Cfr13I	GGNCC	6 cut(s)	876, 1022, 1337, 1917, 2028, 3012
CseI	GACGC	3 cut(s)	189, 208, 443
CsiI	ACCWGGT	1 cut(s)	651
Csp6I	GTAC	2 cut(s)	940, 3006
CviAII	CATG	8 cut(s)	296, 818, 1172, 1301, 1541, 2639, 2902, 2942
CviQI	GTAC	2 cut(s)	940, 3006
EaeI	YGGCCR	1 cut(s)	847
Eam1104I	CTCTTC	8 cut(s)	30, 311, 928, 1227, 1759, 1911, 1959, 2601
EarI	CTCTTC	8 cut(s)	30, 311, 928, 1227, 1759, 1911, 1959, 2601
EciI	GGCGGA	2 cut(s)	775, 3053
Eco130I	CCWWGG	6 cut(s)	295, 1171, 1300, 1381, 1540, 2901
Eco24I	GRGCYC	1 cut(s)	42
Eco31I	GGTCTC	1 cut(s)	3101
Eco32I	GATATC	2 cut(s)	1003, 2170
Eco47I	GGWCC	5 cut(s)	1022, 1337, 1917, 2028, 3012
Eco57I	CTGAAG	6 cut(s)	813, 1746, 1983, 2289, 2909, 3083
Eco88I	CYCGRG	1 cut(s)	561
EcoNI	CCTNNNNNAGG	1 cut(s)	564
EcoO109I	RGGNCCY	2 cut(s)	1917, 2028
EcoRI	GAATTC	3 cut(s)	1039, 1697, 2936
EcoRII	CCWGG	7 cut(s)	328, 651, 987, 1261, 1449, 2140, 2278
EcoRV	GATATC	2 cut(s)	1003, 2170
EcoT14I	CCWWGG	6 cut(s)	295, 1171, 1300, 1381, 1540, 2901
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	6 cut(s)	295, 1171, 1300, 1381, 1540, 2901
Esp3I	CGTCTC	1 cut(s)	1067
FaeI	CATG	8 cut(s)	299, 821, 1175, 1304, 1544, 2642, 2905, 2945
FaqI	GGGAC	8 cut(s)	313, 371, 1005, 2294, 2509, 2739, 2868, 2979
FatI	CATG	8 cut(s)	295, 817, 1171, 1300, 1540, 2638, 2901, 2941
FauI	CCCGC	1 cut(s)	1965
FbaI	TGATCA	2 cut(s)	1183, 2505
FblI	GTMKAC	1 cut(s)	1596
Fnu4HI	GCNGC	6 cut(s)	1251, 2245, 2332, 2557, 2799, 3055
FokI	GGATG	6 cut(s)	1030, 1345, 1513, 1967, 2068, 2269
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	6 cut(s)	1251, 2245, 2332, 2557, 2799, 3055
FspBI	CTAG	6 cut(s)	381, 728, 1779, 2051, 2118, 2951
FspI	TGCGCA	1 cut(s)	1254
GlaI	GCGC	2 cut(s)	1254, 3088
GluI	GCNGC	6 cut(s)	1251, 2245, 2332, 2557, 2799, 3055
GsaI	CCCAGC	1 cut(s)	219
GsuI	CTGGAG	1 cut(s)	1860
HaeIII	GGCC	3 cut(s)	849, 878, 1011
HapII	CCGG	2 cut(s)	367, 554
HgaI	GACGC	3 cut(s)	189, 208, 443
HhaI	GCGC	2 cut(s)	1255, 3089
Hin1I	GRCGYC	1 cut(s)	181
Hin1II	CATG	8 cut(s)	299, 821, 1175, 1304, 1544, 2642, 2905, 2945
Hin6I	GCGC	2 cut(s)	1253, 3087
HinP1I	GCGC	2 cut(s)	1253, 3087
HincII	GTYRAC	4 cut(s)	103, 592, 1225, 1447
HindII	GTYRAC	4 cut(s)	103, 592, 1225, 1447
HindIII	AAGCTT	3 cut(s)	266, 868, 2301
HpaI	GTTAAC	1 cut(s)	1447
HpaII	CCGG	2 cut(s)	367, 554
HphI	GGTGA	8 cut(s)	203, 268, 749, 836, 907, 1418, 1599, 2875
Hpy99I	CGWCG	2 cut(s)	11, 179
HpyAV	CCTTC	8 cut(s)	757, 2035, 2158, 2359, 2396, 2456, 2767, 3077
HpyCH4III	ACNGT	5 cut(s)	25, 61, 1825, 2700, 2720
HpyCH4IV	ACGT	2 cut(s)	942, 1498
HpyCH4V	TGCA	6 cut(s)	195, 946, 1671, 1676, 2429, 2473
HpyF10VI	GCNNNNNNNGC	5 cut(s)	394, 1247, 1290, 2137, 3109
HpySE526I	ACGT	2 cut(s)	942, 1498
Hsp92I	GRCGYC	1 cut(s)	181
Hsp92II	CATG	8 cut(s)	299, 821, 1175, 1304, 1544, 2642, 2905, 2945
HspAI	GCGC	2 cut(s)	1253, 3087
Ksp22I	TGATCA	2 cut(s)	1183, 2505
KspAI	GTTAAC	1 cut(s)	1447
LguI	GCTCTTC	1 cut(s)	30
LmnI	GCTCC	6 cut(s)	74, 369, 1571, 1969, 2680, 3117
Lsp1109I	GCAGC	6 cut(s)	1237, 2256, 2343, 2568, 2810, 3041
LweI	GCATC	2 cut(s)	2223, 2247
MabI	ACCWGGT	1 cut(s)	651
MaeI	CTAG	6 cut(s)	381, 728, 1779, 2051, 2118, 2951
MaeII	ACGT	2 cut(s)	942, 1498
MaeIII	GTNAC	4 cut(s)	958, 1345, 1582, 2876
MbiI	CCGCTC	1 cut(s)	1972
MfeI	CAATTG	2 cut(s)	672, 1187
MflI	RGATCY	7 cut(s)	306, 768, 1618, 1721, 2125, 2634, 3135
MhlI	GDGCHC	2 cut(s)	42, 2827
MlsI	TGGCCA	1 cut(s)	849
MluNI	TGGCCA	1 cut(s)	849
MlyI	GAGTC	7 cut(s)	202, 521, 914, 1592, 1648, 2491, 2956
MmeI	TCCRAC	3 cut(s)	157, 2377, 2702
Mox20I	TGGCCA	1 cut(s)	849
MroXI	GAANNNNTTC	1 cut(s)	92
MscI	TGGCCA	1 cut(s)	849
MseI	TTAA	9 cut(s)	66, 542, 1137, 1446, 1947, 2057, 2102, 2490, 2762
MslI	CAYNNNNRTG	2 cut(s)	423, 822
Msp20I	TGGCCA	1 cut(s)	849
MspA1I	CMGCKG	2 cut(s)	1019, 1334
MspCI	CTTAAG	3 cut(s)	65, 2489, 2761
MspI	CCGG	2 cut(s)	367, 554
MspR9I	CCNGG	8 cut(s)	330, 368, 653, 989, 1263, 1451, 2142, 2280
MunI	CAATTG	2 cut(s)	672, 1187
MvaI	CCWGG	7 cut(s)	330, 653, 989, 1263, 1451, 2142, 2280
MwoI	GCNNNNNNNGC	5 cut(s)	394, 1247, 1290, 2137, 3109
NciI	CCSGG	1 cut(s)	368
NcoI	CCATGG	5 cut(s)	295, 1171, 1300, 1540, 2901
NlaIII	CATG	8 cut(s)	299, 821, 1175, 1304, 1544, 2642, 2905, 2945
NlaIV	GGNNCC	4 cut(s)	558, 1240, 2029, 2636
NmuCI	GTSAC	4 cut(s)	958, 1345, 1582, 2876
NsbI	TGCGCA	1 cut(s)	1254
PaeR7I	CTCGAG	1 cut(s)	561
PciSI	GCTCTTC	1 cut(s)	30
PdmI	GAANNNNTTC	1 cut(s)	92
PkrI	GCNGC	6 cut(s)	1252, 2246, 2333, 2558, 2800, 3056
PleI	GAGTC	7 cut(s)	202, 520, 914, 1592, 1648, 2491, 2955
PpsI	GAGTC	7 cut(s)	202, 520, 914, 1592, 1648, 2491, 2955
Ppu21I	YACGTR	1 cut(s)	943
PpuMI	RGGWCCY	2 cut(s)	1917, 2028
PshAI	GACNNNNGTC	1 cut(s)	2026
PshBI	ATTAAT	1 cut(s)	542
Psp5II	RGGWCCY	2 cut(s)	1917, 2028
Psp6I	CCWGG	7 cut(s)	328, 651, 987, 1261, 1449, 2140, 2278
PspFI	CCCAGC	1 cut(s)	215
PspGI	CCWGG	7 cut(s)	328, 651, 987, 1261, 1449, 2140, 2278
PspN4I	GGNNCC	4 cut(s)	558, 1240, 2029, 2636
PspPI	GGNCC	6 cut(s)	876, 1022, 1337, 1917, 2028, 3012
PspPPI	RGGWCCY	2 cut(s)	1917, 2028
PspXI	VCTCGAGB	1 cut(s)	561
PstI	CTGCAG	1 cut(s)	1678
PstNI	CAGNNNCTG	2 cut(s)	479, 1592
PsuI	RGATCY	7 cut(s)	306, 768, 1618, 1721, 2125, 2634, 3135
PvuII	CAGCTG	2 cut(s)	1019, 1334
RsaI	GTAC	2 cut(s)	941, 3007
RsaNI	GTAC	2 cut(s)	940, 3006
RseI	CAYNNNNRTG	2 cut(s)	423, 822
SapI	GCTCTTC	1 cut(s)	30
SaqAI	TTAA	9 cut(s)	66, 542, 1137, 1446, 1947, 2057, 2102, 2490, 2762
SatI	GCNGC	6 cut(s)	1251, 2245, 2332, 2557, 2799, 3055
Sau96I	GGNCC	6 cut(s)	876, 1022, 1337, 1917, 2028, 3012
SchI	GAGTC	7 cut(s)	202, 521, 914, 1592, 1648, 2491, 2956
ScrFI	CCNGG	8 cut(s)	330, 368, 653, 989, 1263, 1451, 2142, 2280
SduI	GDGCHC	2 cut(s)	42, 2827
SexAI	ACCWGGT	1 cut(s)	651
SfaNI	GCATC	2 cut(s)	2223, 2247
SfcI	CTRYAG	3 cut(s)	391, 1593, 1674
Sfr274I	CTCGAG	1 cut(s)	561
SinI	GGWCC	5 cut(s)	1022, 1337, 1917, 2028, 3012
SlaI	CTCGAG	1 cut(s)	561
SmiMI	CAYNNNNRTG	2 cut(s)	423, 822
SmlI	CTYRAG	7 cut(s)	65, 83, 561, 2489, 2761, 2931, 3098
SmoI	CTYRAG	7 cut(s)	65, 83, 561, 2489, 2761, 2931, 3098
SsiI	CCGC	6 cut(s)	119, 471, 760, 1070, 1972, 3038
SspI	AATATT	2 cut(s)	664, 1217
SspMI	CTAG	6 cut(s)	381, 728, 1779, 2051, 2118, 2951
StyD4I	CCNGG	8 cut(s)	328, 366, 651, 987, 1261, 1449, 2140, 2278
StyI	CCWWGG	6 cut(s)	295, 1171, 1300, 1381, 1540, 2901
TaaI	ACNGT	5 cut(s)	25, 61, 1825, 2700, 2720
TaiI	ACGT	2 cut(s)	945, 1501
TaqI	TCGA	5 cut(s)	337, 562, 1736, 2020, 2353
TaqII	GACCGA	1 cut(s)	822
Tru1I	TTAA	9 cut(s)	66, 542, 1137, 1446, 1947, 2057, 2102, 2490, 2762
Tru9I	TTAA	9 cut(s)	66, 542, 1137, 1446, 1947, 2057, 2102, 2490, 2762
TscAI	CASTG	5 cut(s)	30, 57, 407, 1678, 2658
TseFI	GTSAC	4 cut(s)	958, 1345, 1582, 2876
TseI	GCWGC	6 cut(s)	1250, 2244, 2331, 2556, 2798, 3054
Tsp45I	GTSAC	4 cut(s)	958, 1345, 1582, 2876
TspDTI	ATGAA	8 cut(s)	85, 441, 509, 543, 1032, 1485, 1506, 1866
TspGWI	ACGGA	3 cut(s)	87, 133, 1364
TspRI	CASTG	5 cut(s)	30, 57, 407, 1678, 2658
Vha464I	CTTAAG	3 cut(s)	65, 2489, 2761
VpaK11BI	GGWCC	5 cut(s)	1022, 1337, 1917, 2028, 3012
VspI	ATTAAT	1 cut(s)	542
XagI	CCTNNNNNAGG	1 cut(s)	564
XapI	RAATTY	7 cut(s)	496, 686, 1039, 1697, 2104, 2390, 2936
XhoI	CTCGAG	1 cut(s)	561
XmiI	GTMKAC	1 cut(s)	1596
XmnI	GAANNNNTTC	1 cut(s)	92
XspI	CTAG	6 cut(s)	381, 728, 1779, 2051, 2118, 2951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.