Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0004743

Physical Location & Seq

Genomic Coordinates Reverse (-)

30569856 .. 30573912

Gene Structure 4057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G015820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGGCGACGAGAATGCGAAAACAGTGGTTGAAGAAGAGCCCAAAATCCCAGTGTTCACAGTCCTTAAGAACGGAGCGATTCTCAAGAACATCTTCATCGTCAACAAACCCCCACCACCGCCACACTCCGAACCAATCTCGTCCGTCCATCAAGAAACCGAAGAAATCTTGATCGTCGGACGCCACCCCGACTGCAACATCGTGCTGACTCACCCCAGCGTCAGCAGATTCCACCTCCAAATCCTCTCTAATCCCTCCTCCCACAAGCTTTCCCTCACCGATTTATCATCAGTCCATGGGACTTGGATCTCGGAGAAGAGGATTGAGCCAGGGGTTCGAGTAGAGCTGAGGCAAGGGGACACGCTCCGGGTTGGTGCTTCTAGCAGGCTCTACAGGCTTCACTGGATTCCTTTGAGCCACGCCTATGAACAAGACGCACTCAGGGTGAGACCAATCGTCTTCTTGGGCTTCTCTGCTTTGAATTTCTTGATGCGAATTGAATTGGTTAGGGTTTCTGTTGTGAATATTTTGCCAATTGAAAAAGCAGAATTTGAATCTACTGAATCAGTTTCTGAGGTTATAGAATCTCTAGTCTGTGGTGATAATTTGGGATTTATTGGGCGGAAGGAGATCCCATCAGCACCTCCAATGCCTGAAGAAGAAGACCGAAGTGAACATGTTGGTGAGAACTCGTCAAAAGTTGTTGGCCAAGAGAATGTGTTGTCAAGCTTCTGGGCCTTTGGAACTGAATCGGTGAACCTGTTTTTTCCTCTTGAAGACTCTTCAAAGGAAAACCAGTACGTGCAACTAAGTTGTGTCACAGGAGGTTCTGAATTGGAAAAAGAAGGAGAAGCTTCTCCTACTGTTCAGATATTGGAAAAAGACCAGGGACAGAGTGATATCTCTGGTCTTTCAGCTGGACCTTTTGTGATAGAGAATTCATCCTTGCTGATCCAAGAAGTCCTTGCGGAGACGAAACATCAACAAGTTGAAGAAGTAAACCTGACACCAGAAACAAAATCAGACTTGCTGGTTAATCTGGATGGCAAAAGCTCTATAACGAAAGACCATGGACAGGCTGATCATTTGTGTCTATCTTCTGAACCTCTTGAATATTCTGTTGACAAGGAAGAGGGTGCCTATCCTGCTGCGCAAATACCTGGGAGAAATGCTGACCAAAGCTCTTTGAGCAAAGACCATGGACAGAATGATAATGTCTTGTGTCTTTCAGCTGGACCTTTTGTGACGGAGAACTCTTCCTTGCTGGTTGGGGAAGTCCTTGGGGAGATCAACAATCAACAAGGTGAAGAAGAAAACCCATCACAAAAACCTACCTTGCTGGTTAACCTGGATTTTGAGATTTCTGATGAAATCAGATGTCTTGTTGATGAAAGACGTGGAGAAACTGAAAAGAGAAGTGTGTCACCCAAAAACCACCATGAAAAGAGGGATACCAAAACCATCTCCTCTGTGCCTCTTGTCACAGATTCTGTAGAGAACCAGACTCCACTATCTATCTGCACTGCAGGAGGACAGCCTGAATCAGAATTCTGTAATAGCCCTCCCCTGAGATCCGAAGATAAGTCAATCTTTGGAGAAAGCATTTGGGAAAGAAGAGGTAAACCTGCTAGTGCTGTTAGGATTCAAACAGAGAGAAGCAGAGAAAGAACTACTGTGGAGGCAGGAATTGATAACGATAATGAACAGGAGGTGGAAAGCTTTACTCCAGACAAGGAGAATCTAACACCAAATACTCTTCGTCTGAGGTCCTTGAAAAAGAAGTTTGAGGTAGAAATTAAGCTGGATGATACTCAAGAGGAGCAGGAAATCTTTACTCCTGACAAGGAAAACTTCACACCAAATACTCTTCAACTGAGGTCCTTGAAGAAGAAGGGTAAGCTAGAATTAACCGATTCCAAATCCCACAGATCATCCTTGTCGAAGCAAAACTTAAATTCCAATATCCCTAGAGAAGATCTGCTTGTATCGCCGGGGAAAGAGAACCAGAAGTTGAAGGATATCCAAGAAAGAAAATCAGTAGAAACTACTACTGGGAATCAAGCAAGGGTGGAAAAAAAGTTGATGCTCACAAGCAGCACGAAAAGGATGCCATTCCAATCACTACTTAAAAGTTCTGCAGGCAAGAACAGCAGATCAGAAGCTTCAGTCCCCGATGTAGCTACTAAAAGCAGCACATTTCTTGCTTGTAGTCAAACAAAGGAGAAGGTCAAGAATCCACTCTCTGTAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004540 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006401 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008995 GO:0009056 GO:0009057 GO:0009555 GO:0009892 GO:0009987 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0016070 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019439 GO:0019888 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0034641 GO:0034655 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043666 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045936 GO:0046483 GO:0046700 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098772 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PIN_4

Protein Analysis

750

Amino Acids

83.18

Weight (kDa)

5.18

Isoelectric Point (pI)

55.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yop-YscD_cpl	PF16697	54 - 126	9.5e-09	Inner membrane component of T3SS, cytoplasmic domain
FHA	PF00498	58 - 125	5.6e-17	FHA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34355 AT1G34355 AT1G34355
fragaria_vesca	FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232
malus_domestica	MD05G1040500.v1.1 MD10G1046600.v1.1
prunus_persica	Prupe.8G054200_v2.0.a1
pyrus_communis	pycom05g03310 pycom10g03280 pycom10g03290
rosa_chinensis	RchiOBHm_Chr6g0272171
rosa_laevigata	RLG00000013694
rosa_multiflora	Rmu_sc0005748.1_g000012
rosa_roxburghii	Rroxscaffold_7G00196530
rosa_rugosa	Rorug06G0066700
rosa_samantha	Rh6AG183500 Rh6BG183500 Rh6BG183600 Rh6CG184900 Rh6DG176600
rosa_wichuraiana	Rw6G015820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1152
Acc36I	ACCTGC	1 cut(s)	1633
AccB1I	GGYRCC	1 cut(s)	1136
AciI	CCGC	3 cut(s)	119, 622, 968
AclWI	GGATC	4 cut(s)	314, 625, 946, 1566
AcoI	YGGCCR	1 cut(s)	706
AcsI	RAATTY	5 cut(s)	481, 548, 937, 1547, 1954
AcuI	CTGAAG	2 cut(s)	675, 2148
AcyI	GRCGYC	1 cut(s)	181
AfaI	GTAC	1 cut(s)	800
AfiI	CCNNNNNNNGG	1 cut(s)	1075
AflII	CTTAAG	1 cut(s)	65
AflIII	ACRYGT	1 cut(s)	676
AhdI	GACNNNNNGTC	1 cut(s)	455
AjiI	CACGTC	1 cut(s)	1397
AjnI	CCWGG	4 cut(s)	328, 885, 1159, 1347
Alw26I	GTCTC	2 cut(s)	442, 965
AlwI	GGATC	4 cut(s)	314, 625, 946, 1566
AlwNI	CAGNNNCTG	2 cut(s)	572, 1490
AoxI	GGCC	2 cut(s)	706, 735
ApeKI	GCWGC	3 cut(s)	1148, 2094, 2190
ApoI	RAATTY	5 cut(s)	481, 548, 937, 1547, 1954
Asp700I	GAANNNNTTC	1 cut(s)	92
AspLEI	GCGC	1 cut(s)	1153
AspS9I	GGNCC	5 cut(s)	735, 920, 1235, 1767, 1878
AsuC2I	CCSGG	2 cut(s)	368, 1992
AsuHPI	GGTGA	8 cut(s)	203, 268, 457, 611, 695, 766, 1316, 1416
AvaII	GGWCC	4 cut(s)	920, 1235, 1767, 1878
BalI	TGGCCA	1 cut(s)	708
BanI	GGYRCC	1 cut(s)	1136
BanII	GRGCYC	1 cut(s)	42
BbsI	GAAGAC	3 cut(s)	451, 669, 783
BbvCI	CCTCAGC	1 cut(s)	347
BbvI	GCAGC	3 cut(s)	1135, 2106, 2202
BccI	CCATC	5 cut(s)	156, 643, 1037, 1327, 1469
BcgI	CGANNNNNNTGC	3 cut(s)	30, 2089, 2123
BciT130I	CCWGG	4 cut(s)	330, 887, 1161, 1349
BciVI	GTATCC	1 cut(s)	1444
BclI	TGATCA	1 cut(s)	1081
BcnI	CCSGG	2 cut(s)	368, 1992
BcoDI	GTCTC	2 cut(s)	442, 965
BfaI	CTAG	5 cut(s)	381, 590, 1629, 1901, 1968
BfmI	CTRYAG	4 cut(s)	391, 1491, 1524, 2136
BfrI	CTTAAG	1 cut(s)	65
BfuAI	ACCTGC	1 cut(s)	1633
BfuI	GTATCC	1 cut(s)	1444
BglII	AGATCT	1 cut(s)	1975
BisI	GCNGC	3 cut(s)	1149, 2095, 2191
BlsI	GCNGC	3 cut(s)	1150, 2096, 2192
Bme1390I	CCNGG	6 cut(s)	330, 368, 887, 1161, 1349, 1992
Bme18I	GGWCC	4 cut(s)	920, 1235, 1767, 1878
BmeRI	GACNNNNNGTC	1 cut(s)	455
BmgBI	CACGTC	1 cut(s)	1397
BmgT120I	GGNCC	5 cut(s)	735, 920, 1235, 1767, 1878
BmiI	GGNNCC	1 cut(s)	1138
BmrFI	CCNGG	6 cut(s)	330, 368, 887, 1161, 1349, 1992
BmrI	ACTGGG	2 cut(s)	44, 2061
BmsI	GCATC	3 cut(s)	480, 2073, 2097
BmuI	ACTGGG	2 cut(s)	44, 2061
BpiI	GAAGAC	3 cut(s)	451, 669, 783
BplI	GAGNNNNNCTC	2 cut(s)	66, 98
BpmI	CTGGAG	1 cut(s)	1710
Bpu10I	CCTNAGC	1 cut(s)	347
BpuEI	CTTGAG	2 cut(s)	68, 1797
BpuMI	CCSGG	2 cut(s)	368, 1992
BsaAI	YACGTR	1 cut(s)	802
BsaHI	GRCGYC	1 cut(s)	181
BsaI	GGTCTC	1 cut(s)	442
BsaJI	CCNNGG	8 cut(s)	295, 329, 886, 1069, 1160, 1198, 1279, 1991
Bsc4I	CCNNNNNNNGG	1 cut(s)	1075
Bse1I	ACTGG	4 cut(s)	50, 407, 796, 2056
BseBI	CCWGG	4 cut(s)	330, 887, 1161, 1349
BseDI	CCNNGG	8 cut(s)	295, 329, 886, 1069, 1160, 1198, 1279, 1991
BseGI	GGATG	5 cut(s)	941, 1048, 1810, 1931, 2112
BseLI	CCNNNNNNNGG	1 cut(s)	1075
BseMII	CTCAG	6 cut(s)	338, 454, 564, 1559, 1754, 1865
BseNI	ACTGG	4 cut(s)	50, 407, 796, 2056
BseRI	GAGGAG	3 cut(s)	247, 1456, 1832
BseXI	GCAGC	3 cut(s)	1135, 2106, 2202
BseYI	CCCAGC	1 cut(s)	215
BsgI	GTGCAG	1 cut(s)	1504
BshFI	GGCC	2 cut(s)	708, 737
BshNI	GGYRCC	1 cut(s)	1136
BsiSI	CCGG	2 cut(s)	367, 1991
BslFI	GGGAC	4 cut(s)	313, 371, 903, 2153
BslI	CCNNNNNNNGG	1 cut(s)	1075
BsmAI	GTCTC	2 cut(s)	442, 965
BsmBI	CGTCTC	1 cut(s)	965
BsmFI	GGGAC	4 cut(s)	313, 371, 903, 2153
BsmI	GAATGC	1 cut(s)	19
BsnI	GGCC	2 cut(s)	708, 737
Bso31I	GGTCTC	1 cut(s)	442
Bsp1286I	GDGCHC	1 cut(s)	42
Bsp19I	CCATGG	3 cut(s)	295, 1069, 1198
BspACI	CCGC	3 cut(s)	119, 622, 968
BspANI	GGCC	2 cut(s)	708, 737
BspCNI	CTCAG	6 cut(s)	339, 453, 565, 1560, 1755, 1866
BspLI	GGNNCC	1 cut(s)	1138
BspMAI	CTGCAG	2 cut(s)	1528, 2140
BspMI	ACCTGC	1 cut(s)	1633
BspPI	GGATC	4 cut(s)	314, 625, 946, 1566
BspQI	GCTCTTC	1 cut(s)	30
BspT107I	GGYRCC	1 cut(s)	1136
BspTI	CTTAAG	1 cut(s)	65
BspTNI	GGTCTC	1 cut(s)	442
BsrI	ACTGG	4 cut(s)	50, 407, 796, 2056
BssECI	CCNNGG	8 cut(s)	295, 329, 886, 1069, 1160, 1198, 1279, 1991
BssNI	GRCGYC	1 cut(s)	181
BssT1I	CCWWGG	4 cut(s)	295, 1069, 1198, 1279
Bst2UI	CCWGG	4 cut(s)	330, 887, 1161, 1349
Bst4CI	ACNGT	4 cut(s)	25, 61, 865, 1675
Bst6I	CTCTTC	8 cut(s)	30, 311, 787, 1125, 1261, 1609, 1761, 1872
BstACI	GRCGYC	1 cut(s)	181
BstAFI	CTTAAG	1 cut(s)	65
BstBAI	YACGTR	1 cut(s)	802
BstC8I	GCNNGC	2 cut(s)	386, 2140
BstDEI	CTNAG	7 cut(s)	347, 440, 573, 809, 1568, 1763, 1874
BstDSI	CCRYGG	3 cut(s)	295, 1069, 1198
BstF5I	GGATG	5 cut(s)	941, 1048, 1810, 1931, 2112
BstHHI	GCGC	1 cut(s)	1153
BstMAI	GTCTC	2 cut(s)	442, 965
BstMWI	GCNNNNNNNGC	5 cut(s)	394, 1145, 1188, 1987, 2148
BstNI	CCWGG	4 cut(s)	330, 887, 1161, 1349
BstNSI	RCATGY	1 cut(s)	680
BstSCI	CCNGG	6 cut(s)	328, 366, 885, 1159, 1347, 1990
BstSFI	CTRYAG	4 cut(s)	391, 1491, 1524, 2136
BstV1I	GCAGC	3 cut(s)	1135, 2106, 2202
BstV2I	GAAGAC	3 cut(s)	451, 669, 783
BstX2I	RGATCY	4 cut(s)	306, 630, 1571, 1975
BstYI	RGATCY	4 cut(s)	306, 630, 1571, 1975
BsuI	GTATCC	1 cut(s)	1444
BsuRI	GGCC	2 cut(s)	708, 737
BtgI	CCRYGG	3 cut(s)	295, 1069, 1198
BtrI	CACGTC	1 cut(s)	1397
BtsCI	GGATG	5 cut(s)	941, 1048, 1810, 1931, 2112
BtsI	GCAGTG	1 cut(s)	1521
BtsIMutI	CAGTG	4 cut(s)	30, 57, 400, 1521
BveI	ACCTGC	1 cut(s)	1633
Cac8I	GCNNGC	2 cut(s)	386, 2140
CaiI	CAGNNNCTG	2 cut(s)	572, 1490
CfoI	GCGC	1 cut(s)	1153
Cfr13I	GGNCC	5 cut(s)	735, 920, 1235, 1767, 1878
CseI	GACGC	3 cut(s)	189, 208, 443
Csp6I	GTAC	1 cut(s)	799
CviAII	CATG	5 cut(s)	296, 677, 1070, 1199, 1439
CviQI	GTAC	1 cut(s)	799
DdeI	CTNAG	7 cut(s)	347, 440, 573, 809, 1568, 1763, 1874
DriI	GACNNNNNGTC	1 cut(s)	455
EaeI	YGGCCR	1 cut(s)	706
Eam1104I	CTCTTC	8 cut(s)	30, 311, 787, 1125, 1261, 1609, 1761, 1872
Eam1105I	GACNNNNNGTC	1 cut(s)	455
EarI	CTCTTC	8 cut(s)	30, 311, 787, 1125, 1261, 1609, 1761, 1872
EciI	GGCGGA	1 cut(s)	637
Eco130I	CCWWGG	4 cut(s)	295, 1069, 1198, 1279
Eco24I	GRGCYC	1 cut(s)	42
Eco31I	GGTCTC	1 cut(s)	442
Eco32I	GATATC	2 cut(s)	901, 2020
Eco47I	GGWCC	4 cut(s)	920, 1235, 1767, 1878
Eco57I	CTGAAG	2 cut(s)	675, 2148
EcoO109I	RGGNCCY	2 cut(s)	1767, 1878
EcoRI	GAATTC	2 cut(s)	937, 1547
EcoRII	CCWGG	4 cut(s)	328, 885, 1159, 1347
EcoRV	GATATC	2 cut(s)	901, 2020
EcoT14I	CCWWGG	4 cut(s)	295, 1069, 1198, 1279
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	4 cut(s)	295, 1069, 1198, 1279
Esp3I	CGTCTC	1 cut(s)	965
FaeI	CATG	5 cut(s)	299, 680, 1073, 1202, 1442
FaiI	YATR	8 cut(s)	297, 426, 581, 678, 1058, 1071, 1200, 1440
FaqI	GGGAC	4 cut(s)	313, 371, 903, 2153
FatI	CATG	5 cut(s)	295, 676, 1069, 1198, 1438
FbaI	TGATCA	1 cut(s)	1081
Fnu4HI	GCNGC	3 cut(s)	1149, 2095, 2191
FokI	GGATG	5 cut(s)	928, 1055, 1817, 1918, 2119
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	3 cut(s)	1149, 2095, 2191
FspBI	CTAG	5 cut(s)	381, 590, 1629, 1901, 1968
FspI	TGCGCA	1 cut(s)	1152
GlaI	GCGC	1 cut(s)	1152
GluI	GCNGC	3 cut(s)	1149, 2095, 2191
GsaI	CCCAGC	1 cut(s)	219
GsuI	CTGGAG	1 cut(s)	1710
HaeIII	GGCC	2 cut(s)	708, 737
HapII	CCGG	2 cut(s)	367, 1991
HgaI	GACGC	3 cut(s)	189, 208, 443
HhaI	GCGC	1 cut(s)	1153
Hin1I	GRCGYC	1 cut(s)	181
Hin1II	CATG	5 cut(s)	299, 680, 1073, 1202, 1442
Hin6I	GCGC	1 cut(s)	1151
HinP1I	GCGC	1 cut(s)	1151
HincII	GTYRAC	3 cut(s)	103, 1123, 1345
HindII	GTYRAC	3 cut(s)	103, 1123, 1345
HindIII	AAGCTT	5 cut(s)	266, 727, 852, 1717, 2160
HpaI	GTTAAC	1 cut(s)	1345
HpaII	CCGG	2 cut(s)	367, 1991
HphI	GGTGA	8 cut(s)	203, 268, 457, 611, 695, 766, 1316, 1416
Hpy166II	GTNNAC	8 cut(s)	57, 103, 674, 757, 1000, 1123, 1345, 1622
Hpy8I	GTNNAC	8 cut(s)	57, 103, 674, 757, 1000, 1123, 1345, 1622
Hpy99I	CGWCG	2 cut(s)	11, 179
HpyAV	CCTTC	5 cut(s)	619, 839, 1885, 2008, 2218
HpyCH4III	ACNGT	4 cut(s)	25, 61, 865, 1675
HpyCH4IV	ACGT	2 cut(s)	801, 1396
HpyCH4V	TGCA	5 cut(s)	195, 805, 1521, 1526, 2138
HpyF10VI	GCNNNNNNNGC	5 cut(s)	394, 1145, 1188, 1987, 2148
HpyF3I	CTNAG	7 cut(s)	347, 440, 573, 809, 1568, 1763, 1874
HpySE526I	ACGT	2 cut(s)	801, 1396
Hsp92I	GRCGYC	1 cut(s)	181
Hsp92II	CATG	5 cut(s)	299, 680, 1073, 1202, 1442
HspAI	GCGC	1 cut(s)	1151
Ksp22I	TGATCA	1 cut(s)	1081
KspAI	GTTAAC	1 cut(s)	1345
LguI	GCTCTTC	1 cut(s)	30
LmnI	GCTCC	3 cut(s)	74, 369, 1819
Lsp1109I	GCAGC	3 cut(s)	1135, 2106, 2202
LweI	GCATC	3 cut(s)	480, 2073, 2097
MaeI	CTAG	5 cut(s)	381, 590, 1629, 1901, 1968
MaeII	ACGT	2 cut(s)	801, 1396
MaeIII	GTNAC	4 cut(s)	817, 1243, 1422, 1480
MfeI	CAATTG	1 cut(s)	534
MflI	RGATCY	4 cut(s)	306, 630, 1571, 1975
MhlI	GDGCHC	1 cut(s)	42
MlsI	TGGCCA	1 cut(s)	708
MluNI	TGGCCA	1 cut(s)	708
MlyI	GAGTC	3 cut(s)	202, 773, 1498
MmeI	TCCRAC	1 cut(s)	157
Mox20I	TGGCCA	1 cut(s)	708
MroXI	GAANNNNTTC	1 cut(s)	92
MscI	TGGCCA	1 cut(s)	708
MseI	TTAA	7 cut(s)	66, 1035, 1344, 1797, 1907, 1952, 2127
MslI	CAYNNNNRTG	2 cut(s)	423, 681
Msp20I	TGGCCA	1 cut(s)	708
MspA1I	CMGCKG	2 cut(s)	917, 1232
MspCI	CTTAAG	1 cut(s)	65
MspI	CCGG	2 cut(s)	367, 1991
MspR9I	CCNGG	6 cut(s)	330, 368, 887, 1161, 1349, 1992
MunI	CAATTG	1 cut(s)	534
Mva1269I	GAATGC	1 cut(s)	19
MvaI	CCWGG	4 cut(s)	330, 887, 1161, 1349
MwoI	GCNNNNNNNGC	5 cut(s)	394, 1145, 1188, 1987, 2148
NciI	CCSGG	2 cut(s)	368, 1992
NcoI	CCATGG	3 cut(s)	295, 1069, 1198
NlaIII	CATG	5 cut(s)	299, 680, 1073, 1202, 1442
NlaIV	GGNNCC	1 cut(s)	1138
NmuCI	GTSAC	4 cut(s)	817, 1243, 1422, 1480
NsbI	TGCGCA	1 cut(s)	1152
NspI	RCATGY	1 cut(s)	680
PciI	ACATGT	1 cut(s)	676
PciSI	GCTCTTC	1 cut(s)	30
PctI	GAATGC	1 cut(s)	19
PdmI	GAANNNNTTC	1 cut(s)	92
PkrI	GCNGC	3 cut(s)	1150, 2096, 2192
PleI	GAGTC	3 cut(s)	202, 773, 1498
PpsI	GAGTC	3 cut(s)	202, 773, 1498
Ppu21I	YACGTR	1 cut(s)	802
PpuMI	RGGWCCY	2 cut(s)	1767, 1878
PscI	ACATGT	1 cut(s)	676
Psp5II	RGGWCCY	2 cut(s)	1767, 1878
Psp6I	CCWGG	4 cut(s)	328, 885, 1159, 1347
PspFI	CCCAGC	1 cut(s)	215
PspGI	CCWGG	4 cut(s)	328, 885, 1159, 1347
PspN4I	GGNNCC	1 cut(s)	1138
PspPI	GGNCC	5 cut(s)	735, 920, 1235, 1767, 1878
PspPPI	RGGWCCY	2 cut(s)	1767, 1878
PstI	CTGCAG	2 cut(s)	1528, 2140
PstNI	CAGNNNCTG	2 cut(s)	572, 1490
PsuI	RGATCY	4 cut(s)	306, 630, 1571, 1975
PvuII	CAGCTG	2 cut(s)	917, 1232
RsaI	GTAC	1 cut(s)	800
RsaNI	GTAC	1 cut(s)	799
RseI	CAYNNNNRTG	2 cut(s)	423, 681
SapI	GCTCTTC	1 cut(s)	30
SaqAI	TTAA	7 cut(s)	66, 1035, 1344, 1797, 1907, 1952, 2127
SatI	GCNGC	3 cut(s)	1149, 2095, 2191
Sau96I	GGNCC	5 cut(s)	735, 920, 1235, 1767, 1878
SchI	GAGTC	3 cut(s)	202, 773, 1498
ScrFI	CCNGG	6 cut(s)	330, 368, 887, 1161, 1349, 1992
SduI	GDGCHC	1 cut(s)	42
SfaNI	GCATC	3 cut(s)	480, 2073, 2097
SfcI	CTRYAG	4 cut(s)	391, 1491, 1524, 2136
SinI	GGWCC	4 cut(s)	920, 1235, 1767, 1878
SmiMI	CAYNNNNRTG	2 cut(s)	423, 681
SmlI	CTYRAG	3 cut(s)	65, 83, 1812
SmoI	CTYRAG	3 cut(s)	65, 83, 1812
SsiI	CCGC	3 cut(s)	119, 622, 968
SspI	AATATT	2 cut(s)	526, 1115
SspMI	CTAG	5 cut(s)	381, 590, 1629, 1901, 1968
StyD4I	CCNGG	6 cut(s)	328, 366, 885, 1159, 1347, 1990
StyI	CCWWGG	4 cut(s)	295, 1069, 1198, 1279
TaaI	ACNGT	4 cut(s)	25, 61, 865, 1675
TaiI	ACGT	2 cut(s)	804, 1399
TaqI	TCGA	2 cut(s)	337, 1940
TaqII	GACCGA	1 cut(s)	681
Tru1I	TTAA	7 cut(s)	66, 1035, 1344, 1797, 1907, 1952, 2127
Tru9I	TTAA	7 cut(s)	66, 1035, 1344, 1797, 1907, 1952, 2127
TscAI	CASTG	4 cut(s)	30, 57, 407, 1528
TseFI	GTSAC	4 cut(s)	817, 1243, 1422, 1480
TseI	GCWGC	3 cut(s)	1148, 2094, 2190
Tsp45I	GTSAC	4 cut(s)	817, 1243, 1422, 1480
TspDTI	ATGAA	7 cut(s)	85, 441, 930, 1383, 1404, 1455, 1716
TspGWI	ACGGA	3 cut(s)	87, 133, 1262
TspRI	CASTG	4 cut(s)	30, 57, 407, 1528
Vha464I	CTTAAG	1 cut(s)	65
VpaK11BI	GGWCC	4 cut(s)	920, 1235, 1767, 1878
XapI	RAATTY	5 cut(s)	481, 548, 937, 1547, 1954
XceI	RCATGY	1 cut(s)	680
XmnI	GAANNNNTTC	1 cut(s)	92
XspI	CTAG	5 cut(s)	381, 590, 1629, 1901, 1968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.