Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004743

Physical Location & Seq

Genomic Coordinates Forward (+)

3828699 .. 3832578

Gene Structure 3880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g03310.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2982 bp

ATGGAGAACGAGAAAGTGAACAGGAAACTGAACGGAGAAGAAAATGAAGAAGAAGAAGAAGAGCCCAAAATCCCCGTCTTCACAGTCCTCAAGAACGGAGCCATTCTCAAGAACATCTTTGTCGTCAACAAATCCCCACCGCCGCCGCACTCCAAACCCATCTCCGCAGTCCACCGGAAAACCCATGAAGAAATCTTGATCGTCGGCCGACACCCGGACTGCAATATCGTCTTGACTCACCCCAGCATCAGCAGATTCCACCTCCAAATCCTCTCCGACCCCTTTTCCCAAAAGCTCTCTCTCACCGATTTGTCTTCAGTACATGGGACTTGGGTTTCGGACAAGAAGATCGAGCCGGGAGTTCGAGTGGAGCTGAGCGAAGGGGACAGGCTCCAGCTTGGTGGTTCCAGCAGGGTCTACAGCCTGCACTGGATTCCTATGAGTCGGGCCTATGATTCTGAAACCCCCTTCCTGCCATTCATAGAGCACGAAGATGATGGAAGTGCAGAACAAGTAGTGGACCTGTGGGAGAATTCTTTGTCAGCTGAAAACAAAAAACCTGAATCTCCAGATTCAAATTCAGTGGGTATAGAATCGATGTTCTCTGATGAAATTGTGGGAGTAATTGGGAAGATGGAGGTCCCATCAGCACCTCCGCTGCCGGAAAATGCCATTTACTCAATCTGTGATCAAAGTGAAGAAGGTGGTGAGAACTTATCAAAAGGTAGCGGTGAAGAGAATGAAGTGTCAAGCTTCTGGGCATTTGGAACGGAATCGGTGAACCTGTTTATGAATATGGAAGAATCTAATCCTAGTCAAAAGGAAAACCACCACCCACAGCCTCACTGTGTCACAGAAGAGGTTTCTGAAAGAGAGAACCCGGAGAATTCCTTTTTTACTGCAGAGGAAGGAGAAGCTTATCATGGAAAGAATGATCTTTCTATTCTTTCGACTTTGCCTCTTGTGAATGGAGAAATCCTCGAGGAGACTAAAATTCAGCTAGTTGAGAAAGAAAATCGGACCCCGGAATCAAAACCAAACTTGCCAGTCAACCTGAATGCTGAACATTCTACTGGTGAAAAGGAAGATGAGGCATATCCTGCTACTCAAGTACCTGAGGAATTTGAGAGCCAAAGCCCTTTGAGAAAATATCAGGGACAGATTGATAGTATATGTCTTTCCTCTGGACCTCAGGTGATGGAGAACTCATCCTTGCGGACTGGGGAAGTCCTTGAGGAGGACAAAGATGAACAAATTCCAGAAGAAATCCTGACCCGAGGACCAAAACCGAACTTGCTGATAAGCCAAAAGTTCGAACATTTTGATGAAAAGGAAAAGGAAGCTTATGCTGCTGCTTCTGTACCTGAGAAACTTGAGAACCAAAGCCCATTGGGAAAAGATAATGGACAGACTGATATTTCATGTCTTTTTTCTGGACCTCTTGTGATGGAGAACTTATCATTGCCAATCGGGGAAGTCCTCGGGGAGACCAAAGATCAGAAAGTTGTAGAAGAAAGCCTGACCCCAGAACCAAGATCCAACTTGCCCTTTAACCTAAATTTTGAACATTCTGATGAAAAAGAATGTCTAGTGGATGTGAGTTGTGGAGAATCAGAAAACAAAAGCGTGGCACCAGAAGATCATGAAAAGAGGGATACAAGCATTTCTTCTGCACCTCTTGTGACAGAATGTGGAAACTCATCTATGTCAGAGATAATAGATGACAAAGAGAGCCAGACCCCACAATCTCTCTTTACTGCAGAAGGACAGCCTGAATCGGAATTCTGTGAAAGCCCTCCACTGAGATCAGAGAATAAATCAAGCACGAGGATGGGAAGCGTTTGGACAAGAAGAGGCAAACCTGCTAGTGCTGTAGAGCTTCAAACAGATAAGAGCAGAGGAAAACCTACAGAGGCTGGGTATGATGATGATATTGAAGAGGACGAGGAGATCTTTACTCCAGACAAGGAAAATTTCACCCCAAATACTATTCGACTGAGGTCTTTGAAAAAGAAGGGTACAATAAAAGTTAAGCCTTCCAAATCAAGCACATCATCCTCATCGAAACTAAATCTAGTCTCCAATATCCATCAACAAGAGCTGATTGAATCCCCAGGAAAAGAGAACCAGATAATGAAGGAACTCCAGGAAACAAAATTAGCAGGAAATACGTCTGGAAATCAAGCAAGGGTGGGGAAAAAGTTGACAGTAACAAAATTAAGAAGAGAAAGGATTCCCTTTCAATCACTGAAAAGCTCCGGAGGCAAGAACATATCAGAAGACTCAGTCCCTAACACAGCGACAAAAAGCAGCATATCTTTCAGTTCTACTAAAAATAAGGAAGTTGCCAATGCACACTCTGAACTGGATTGCTTGAAGCAACGTGGCAGCCTTTTCAGAAAGAAAACAGAGGCTGAATCGGTTCTGGAATGGATCGAAGAATGTATGGTTAAAACAAATTGGTGGATCCATGTCCAGAGCTCAAAGGAAGATGGAAGACTGATTGCTCCAACCCCTCCTGTTTCTCCGCAGTCTCTATTTAGTGAGAAGAGTTGGTGCTTTCCTTCTAGGACAGCGGGCTCATTGACTTTTTCGAGGTGTGGGAGCACGATGGACCTTGTATCACCCTCCCCAGAAGACCATATCCTAGATTGTGCTCTTTTACATAGAAGGATGAAGAGGAGCGATGGACAACTTATCCTTCTCAGTAATGATGTTACCTTGAAGATCAAAGCCATGGCAGAGGGTTTGCTTTGTGAGACAGCTCAAGAATTTCGTGTGAGTCTGGTGAACCCACTTTCTGAGAGGTTTATGTGGCCAGACAGTTCTCCCTGTGGGCGTACATGGTCTTACTCCGGCAATGTAGCTTTGAGAGAAAAGTACAATAGCTGCGGCCCTCTGAAGAAGTTGTCAAATGGTGAAGGTGCAAGGGGCTTGAAGCTCATTCTGCACCACAATTCTCATTACGGGCAGATCCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004540 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006401 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008995 GO:0009056 GO:0009057 GO:0009555 GO:0009892 GO:0009987 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0016070 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019439 GO:0019888 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0034641 GO:0034655 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043666 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045936 GO:0046483 GO:0046700 GO:0048229 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0098772 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FHA PIN_4

Protein Analysis

994

Amino Acids

110.45

Weight (kDa)

5.02

Isoelectric Point (pI)

60.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004743)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34355 AT1G34355 AT1G34355
fragaria_vesca	FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232 FvH4_2g12232
malus_domestica	MD05G1040500.v1.1 MD10G1046600.v1.1
prunus_persica	Prupe.8G054200_v2.0.a1
pyrus_communis	pycom05g03310 pycom10g03280 pycom10g03290
rosa_chinensis	RchiOBHm_Chr6g0272171
rosa_laevigata	RLG00000013694
rosa_multiflora	Rmu_sc0005748.1_g000012
rosa_roxburghii	Rroxscaffold_7G00196530
rosa_rugosa	Rorug06G0066700
rosa_samantha	Rh6AG183500 Rh6BG183500 Rh6BG183600 Rh6CG184900 Rh6DG176600
rosa_wichuraiana	Rw6G015820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	980
Acc36I	ACCTGC	1 cut(s)	1870
AccB1I	GGYRCC	1 cut(s)	1630
AccI	GTMKAC	1 cut(s)	417
AccIII	TCCGGA	1 cut(s)	2258
AclWI	GGATC	5 cut(s)	1530, 2441, 2461, 2474, 2968
AcoI	YGGCCR	2 cut(s)	205, 2816
AcuI	CTGAAG	2 cut(s)	300, 2921
AfaI	GTAC	6 cut(s)	321, 1113, 1362, 2020, 2842, 2882
AfiI	CCNNNNNNNGG	2 cut(s)	214, 1237
AjnI	CCWGG	2 cut(s)	2113, 2145
Alw21I	GWGCWC	4 cut(s)	489, 2483, 2609, 2659
Alw26I	GTCTC	5 cut(s)	980, 1481, 2083, 2538, 2753
AlwI	GGATC	5 cut(s)	1530, 2441, 2461, 2474, 2968
AlwNI	CAGNNNCTG	2 cut(s)	1916, 2414
Ama87I	CYCGRG	3 cut(s)	980, 1275, 1481
Aor13HI	TCCGGA	1 cut(s)	2258
AoxI	GGCC	4 cut(s)	205, 447, 2816, 2893
ApeKI	GCWGC	6 cut(s)	658, 1349, 1352, 2310, 2388, 2889
ArsI	GACNNNNNNTTYG	4 cut(s)	60, 92, 319, 351
Asp700I	GAANNNNTTC	3 cut(s)	1254, 2232, 2421
AspS9I	GGNCC	9 cut(s)	447, 520, 640, 1020, 1187, 1280, 1436, 2614, 2894
AsuC2I	CCSGG	4 cut(s)	215, 357, 881, 1025
AsuII	TTCGAA	1 cut(s)	1314
AvaI	CYCGRG	3 cut(s)	980, 1275, 1481
AvaII	GGWCC	7 cut(s)	520, 640, 1020, 1187, 1280, 1436, 2614
AxyI	CCTNAGG	2 cut(s)	1116, 1191
BaeI	ACNNNNGTAYC	2 cut(s)	1095, 1128
BalI	TGGCCA	1 cut(s)	2818
BamHI	GGATCC	1 cut(s)	2466
BanI	GGYRCC	1 cut(s)	1630
BanII	GRGCYC	3 cut(s)	66, 2483, 2582
BauI	CACGAG	1 cut(s)	1825
BbsI	GAAGAC	5 cut(s)	70, 306, 2286, 2503, 2643
Bbv12I	GWGCWC	4 cut(s)	489, 2483, 2609, 2659
BbvI	GCAGC	6 cut(s)	645, 1336, 1339, 2322, 2400, 2876
BciT130I	CCWGG	2 cut(s)	2115, 2147
BciVI	GTATCC	1 cut(s)	1648
BclI	TGATCA	1 cut(s)	688
BcnI	CCSGG	4 cut(s)	215, 357, 881, 1025
BcoDI	GTCTC	5 cut(s)	980, 1481, 2083, 2538, 2753
BfaI	CTAG	7 cut(s)	813, 1001, 1589, 1866, 2075, 2568, 2648
BfmI	CTRYAG	5 cut(s)	418, 900, 1758, 1872, 1908
BfuAI	ACCTGC	1 cut(s)	1870
BfuI	GTATCC	1 cut(s)	1648
BglII	AGATCT	1 cut(s)	1950
BisI	GCNGC	9 cut(s)	143, 146, 659, 1350, 1353, 2311, 2389, 2890, 2893
BlpI	GCTNAGC	1 cut(s)	374
BlsI	GCNGC	9 cut(s)	144, 147, 660, 1351, 1354, 2312, 2390, 2891, 2894
Bme1390I	CCNGG	6 cut(s)	215, 357, 881, 1025, 2115, 2147
Bme18I	GGWCC	7 cut(s)	520, 640, 1020, 1187, 1280, 1436, 2614
BmeT110I	CYCGRG	3 cut(s)	980, 1275, 1481
BmgT120I	GGNCC	9 cut(s)	447, 520, 640, 1020, 1187, 1280, 1436, 2614, 2894
BmiI	GGNNCC	7 cut(s)	100, 392, 406, 642, 1022, 1632, 2468
BmrFI	CCNGG	6 cut(s)	215, 357, 881, 1025, 2115, 2147
BmrI	ACTGGG	1 cut(s)	1230
BmsI	GCATC	1 cut(s)	255
BmuI	ACTGGG	1 cut(s)	1230
BoxI	GACNNNNGTC	1 cut(s)	1999
BpiI	GAAGAC	5 cut(s)	70, 306, 2286, 2503, 2643
BplI	GAGNNNNNCTC	4 cut(s)	90, 122, 963, 995
BpmI	CTGGAG	4 cut(s)	377, 552, 1944, 2129
Bpu1102I	GCTNAGC	1 cut(s)	374
Bpu14I	TTCGAA	1 cut(s)	1314
BpuEI	CTTGAG	6 cut(s)	74, 92, 1092, 1253, 1394, 2751
BpuMI	CCSGG	4 cut(s)	215, 357, 881, 1025
Bsa29I	ATCGAT	1 cut(s)	596
BsaI	GGTCTC	1 cut(s)	1481
BsaJI	CCNNGG	5 cut(s)	1023, 1276, 1480, 2113, 2736
BsaWI	WCCGGW	2 cut(s)	174, 2258
BsaXI	ACNNNNNCTCC	2 cut(s)	351, 381
Bsc4I	CCNNNNNNNGG	2 cut(s)	214, 1237
Bse1I	ACTGG	5 cut(s)	434, 1046, 1078, 1225, 2370
Bse21I	CCTNAGG	2 cut(s)	1116, 1191
Bse3DI	GCAATG	2 cut(s)	1460, 2866
BseAI	TCCGGA	1 cut(s)	2258
BseBI	CCWGG	2 cut(s)	2115, 2147
BseCI	ATCGAT	1 cut(s)	596
BseDI	CCNNGG	5 cut(s)	1023, 1276, 1480, 2113, 2736
BseGI	GGATG	5 cut(s)	1208, 1600, 1836, 2054, 2679
BseLI	CCNNNNNNNGG	2 cut(s)	214, 1237
BseMI	GCAATG	2 cut(s)	1460, 2866
BseMII	CTCAG	9 cut(s)	365, 1107, 1205, 1356, 1793, 1988, 2298, 2719, 2793
BseNI	ACTGG	5 cut(s)	434, 1046, 1078, 1225, 2370
BseRI	GAGGAG	4 cut(s)	998, 1250, 1961, 2695
BseX3I	CGGCCG	1 cut(s)	205
BseXI	GCAGC	6 cut(s)	645, 1336, 1339, 2322, 2400, 2876
BseYI	CCCAGC	2 cut(s)	242, 1916
BsgI	GTGCAG	4 cut(s)	410, 525, 1656, 2933
Bsh1285I	CGRYCG	1 cut(s)	208
BshFI	GGCC	4 cut(s)	207, 449, 2818, 2895
BshNI	GGYRCC	1 cut(s)	1630
BshVI	ATCGAT	1 cut(s)	596
BsiEI	CGRYCG	1 cut(s)	208
BsiHKAI	GWGCWC	4 cut(s)	489, 2483, 2609, 2659
BsiHKCI	CYCGRG	3 cut(s)	980, 1275, 1481
BsiSI	CCGG	8 cut(s)	175, 215, 356, 662, 881, 1025, 2259, 2856
BslFI	GGGAC	5 cut(s)	340, 398, 626, 1170, 2273
BslI	CCNNNNNNNGG	2 cut(s)	214, 1237
BsmAI	GTCTC	5 cut(s)	980, 1481, 2083, 2538, 2753
BsmFI	GGGAC	5 cut(s)	340, 398, 626, 1170, 2273
BsmI	GAATGC	1 cut(s)	1063
BsnI	GGCC	4 cut(s)	207, 449, 2818, 2895
Bso31I	GGTCTC	1 cut(s)	1481
BsoBI	CYCGRG	3 cut(s)	980, 1275, 1481
Bsp119I	TTCGAA	1 cut(s)	1314
Bsp1286I	GDGCHC	6 cut(s)	66, 489, 2483, 2582, 2609, 2659
Bsp13I	TCCGGA	1 cut(s)	2258
Bsp1720I	GCTNAGC	1 cut(s)	374
Bsp19I	CCATGG	1 cut(s)	2736
BspANI	GGCC	4 cut(s)	207, 449, 2818, 2895
BspCNI	CTCAG	9 cut(s)	366, 1108, 1204, 1357, 1794, 1989, 2297, 2718, 2794
BspDI	ATCGAT	1 cut(s)	596
BspEI	TCCGGA	1 cut(s)	2258
BspHI	TCATGA	1 cut(s)	1642
BspLI	GGNNCC	7 cut(s)	100, 392, 406, 642, 1022, 1632, 2468
BspMAI	CTGCAG	2 cut(s)	904, 1762
BspMI	ACCTGC	1 cut(s)	1870
BspPI	GGATC	5 cut(s)	1530, 2441, 2461, 2474, 2968
BspQI	GCTCTTC	1 cut(s)	54
BspT104I	TTCGAA	1 cut(s)	1314
BspT107I	GGYRCC	1 cut(s)	1630
BspTNI	GGTCTC	1 cut(s)	1481
BsrDI	GCAATG	2 cut(s)	1460, 2866
BsrI	ACTGG	5 cut(s)	434, 1046, 1078, 1225, 2370
BssECI	CCNNGG	5 cut(s)	1023, 1276, 1480, 2113, 2736
BssSI	CACGAG	1 cut(s)	1825
BssT1I	CCWWGG	1 cut(s)	2736
Bst2BI	CACGAG	1 cut(s)	1825
Bst2UI	CCWGG	2 cut(s)	2115, 2147
Bst4CI	ACNGT	4 cut(s)	85, 848, 2209, 2825
Bst6I	CTCTTC	8 cut(s)	54, 729, 852, 1846, 1932, 2218, 2543, 2672
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstBI	TTCGAA	1 cut(s)	1314
BstC8I	GCNNGC	2 cut(s)	425, 2578
BstDEI	CTNAG	9 cut(s)	374, 1116, 1191, 1365, 1802, 1997, 2284, 2705, 2802
BstDSI	CCRYGG	1 cut(s)	2736
BstENI	CCTNNNNNAGG	1 cut(s)	1235
BstF5I	GGATG	5 cut(s)	1208, 1600, 1836, 2054, 2679
BstMAI	GTCTC	5 cut(s)	980, 1481, 2083, 2538, 2753
BstMCI	CGRYCG	1 cut(s)	208
BstMWI	GCNNNNNNNGC	4 cut(s)	1100, 1349, 2262, 2947
BstNI	CCWGG	2 cut(s)	2115, 2147
BstPAI	GACNNNNGTC	1 cut(s)	1999
BstSCI	CCNGG	6 cut(s)	213, 355, 879, 1023, 2113, 2145
BstSFI	CTRYAG	5 cut(s)	418, 900, 1758, 1872, 1908
BstV1I	GCAGC	6 cut(s)	645, 1336, 1339, 2322, 2400, 2876
BstV2I	GAAGAC	5 cut(s)	70, 306, 2286, 2503, 2643
BstX2I	RGATCY	4 cut(s)	1535, 1950, 2466, 2973
BstXI	CCANNNNNNTGG	1 cut(s)	401
BstYI	RGATCY	4 cut(s)	1535, 1950, 2466, 2973
BstZI	CGGCCG	1 cut(s)	205
Bsu15I	ATCGAT	1 cut(s)	596
Bsu36I	CCTNAGG	2 cut(s)	1116, 1191
BsuI	GTATCC	1 cut(s)	1648
BsuRI	GGCC	4 cut(s)	207, 449, 2818, 2895
BsuTUI	ATCGAT	1 cut(s)	596
BtgI	CCRYGG	1 cut(s)	2736
BtgZI	GCGATG	1 cut(s)	2700
BtsCI	GGATG	5 cut(s)	1208, 1600, 1836, 2054, 2679
BtsIMutI	CAGTG	5 cut(s)	427, 588, 844, 1799, 2246
BveI	ACCTGC	1 cut(s)	1870
Cac8I	GCNNGC	2 cut(s)	425, 2578
CaiI	CAGNNNCTG	2 cut(s)	1916, 2414
CciI	TCATGA	1 cut(s)	1642
Cfr13I	GGNCC	9 cut(s)	447, 520, 640, 1020, 1187, 1280, 1436, 2614, 2894
ClaI	ATCGAT	1 cut(s)	596
Csp6I	GTAC	6 cut(s)	320, 1112, 1361, 2019, 2841, 2881
CspCI	CAANNNNNGTGG	2 cut(s)	564, 599
CviAII	CATG	8 cut(s)	185, 323, 923, 1422, 1643, 2471, 2737, 2844
CviQI	GTAC	6 cut(s)	320, 1112, 1361, 2019, 2841, 2881
DdeI	CTNAG	9 cut(s)	374, 1116, 1191, 1365, 1802, 1997, 2284, 2705, 2802
EaeI	YGGCCR	2 cut(s)	205, 2816
EagI	CGGCCG	1 cut(s)	205
Eam1104I	CTCTTC	8 cut(s)	54, 729, 852, 1846, 1932, 2218, 2543, 2672
EarI	CTCTTC	8 cut(s)	54, 729, 852, 1846, 1932, 2218, 2543, 2672
Ecl136II	GAGCTC	1 cut(s)	2481
EclXI	CGGCCG	1 cut(s)	205
Eco130I	CCWWGG	1 cut(s)	2736
Eco24I	GRGCYC	3 cut(s)	66, 2483, 2582
Eco31I	GGTCTC	1 cut(s)	1481
Eco47I	GGWCC	7 cut(s)	520, 640, 1020, 1187, 1280, 1436, 2614
Eco52I	CGGCCG	1 cut(s)	205
Eco53kI	GAGCTC	1 cut(s)	2481
Eco57I	CTGAAG	2 cut(s)	300, 2921
Eco81I	CCTNAGG	2 cut(s)	1116, 1191
Eco88I	CYCGRG	3 cut(s)	980, 1275, 1481
EcoICRI	GAGCTC	1 cut(s)	2481
EcoNI	CCTNNNNNAGG	1 cut(s)	1235
EcoO109I	RGGNCCY	1 cut(s)	640
EcoRI	GAATTC	3 cut(s)	532, 886, 1781
EcoRII	CCWGG	2 cut(s)	2113, 2145
EcoT14I	CCWWGG	1 cut(s)	2736
EcoT38I	GRGCYC	3 cut(s)	66, 2483, 2582
ErhI	CCWWGG	1 cut(s)	2736
FaeI	CATG	8 cut(s)	188, 326, 926, 1425, 1646, 2474, 2740, 2847
FalI	AAGNNNNNCTT	4 cut(s)	101, 133, 1651, 1683
FaqI	GGGAC	5 cut(s)	340, 398, 626, 1170, 2273
FatI	CATG	8 cut(s)	184, 322, 922, 1421, 1642, 2470, 2736, 2843
FauI	CCCGC	1 cut(s)	2569
FbaI	TGATCA	1 cut(s)	688
FblI	GTMKAC	1 cut(s)	417
Fnu4HI	GCNGC	9 cut(s)	143, 146, 659, 1350, 1353, 2311, 2389, 2890, 2893
FokI	GGATG	5 cut(s)	1195, 1607, 1843, 2041, 2686
FriOI	GRGCYC	3 cut(s)	66, 2483, 2582
Fsp4HI	GCNGC	9 cut(s)	143, 146, 659, 1350, 1353, 2311, 2389, 2890, 2893
FspBI	CTAG	7 cut(s)	813, 1001, 1589, 1866, 2075, 2568, 2648
GluI	GCNGC	9 cut(s)	143, 146, 659, 1350, 1353, 2311, 2389, 2890, 2893
GsaI	CCCAGC	2 cut(s)	246, 1920
GsuI	CTGGAG	4 cut(s)	377, 552, 1944, 2129
HaeIII	GGCC	4 cut(s)	207, 449, 2818, 2895
HapII	CCGG	8 cut(s)	175, 215, 356, 662, 881, 1025, 2259, 2856
Hin1II	CATG	8 cut(s)	188, 326, 926, 1425, 1646, 2474, 2740, 2847
HincII	GTYRAC	3 cut(s)	127, 1051, 2205
HindII	GTYRAC	3 cut(s)	127, 1051, 2205
HindIII	AAGCTT	3 cut(s)	751, 915, 1341
HpaII	CCGG	8 cut(s)	175, 215, 356, 662, 881, 1025, 2259, 2856
Hpy166II	GTNNAC	9 cut(s)	19, 127, 172, 418, 520, 781, 1051, 2205, 2791
Hpy8I	GTNNAC	9 cut(s)	19, 127, 172, 418, 520, 781, 1051, 2205, 2791
Hpy99I	CGWCG	1 cut(s)	206
HpyCH4III	ACNGT	4 cut(s)	85, 848, 2209, 2825
HpyCH4IV	ACGT	2 cut(s)	2171, 2383
HpyCH4V	TGCA	9 cut(s)	222, 427, 506, 902, 1673, 1760, 2354, 2927, 2950
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1100, 1349, 2262, 2947
HpyF3I	CTNAG	9 cut(s)	374, 1116, 1191, 1365, 1802, 1997, 2284, 2705, 2802
HpySE526I	ACGT	2 cut(s)	2171, 2383
Hsp92II	CATG	8 cut(s)	188, 326, 926, 1425, 1646, 2474, 2740, 2847
Kpn2I	TCCGGA	1 cut(s)	2258
Ksp22I	TGATCA	1 cut(s)	688
LguI	GCTCTTC	1 cut(s)	54
LmnI	GCTCC	7 cut(s)	98, 370, 396, 2261, 2512, 2604, 2682
Lsp1109I	GCAGC	6 cut(s)	645, 1336, 1339, 2322, 2400, 2876
LweI	GCATC	1 cut(s)	255
MaeI	CTAG	7 cut(s)	813, 1001, 1589, 1866, 2075, 2568, 2648
MaeII	ACGT	2 cut(s)	2171, 2383
MaeIII	GTNAC	4 cut(s)	850, 1681, 2209, 2716
MflI	RGATCY	4 cut(s)	1535, 1950, 2466, 2973
MhlI	GDGCHC	6 cut(s)	66, 489, 2483, 2582, 2609, 2659
MlsI	TGGCCA	1 cut(s)	2818
MluNI	TGGCCA	1 cut(s)	2818
MlyI	GAGTC	4 cut(s)	229, 451, 2276, 2791
MmeI	TCCRAC	3 cut(s)	300, 1563, 2534
Mox20I	TGGCCA	1 cut(s)	2818
MroI	TCCGGA	1 cut(s)	2258
MroXI	GAANNNNTTC	3 cut(s)	1254, 2232, 2421
MscI	TGGCCA	1 cut(s)	2818
MseI	TTAA	4 cut(s)	1551, 2031, 2219, 2451
MslI	CAYNNNNRTG	4 cut(s)	492, 1323, 1572, 1829
Msp20I	TGGCCA	1 cut(s)	2818
MspA1I	CMGCKG	3 cut(s)	545, 658, 2576
MspI	CCGG	8 cut(s)	175, 215, 356, 662, 881, 1025, 2259, 2856
MspR9I	CCNGG	6 cut(s)	215, 357, 881, 1025, 2115, 2147
Mva1269I	GAATGC	1 cut(s)	1063
MvaI	CCWGG	2 cut(s)	2115, 2147
MwoI	GCNNNNNNNGC	4 cut(s)	1100, 1349, 2262, 2947
NciI	CCSGG	4 cut(s)	215, 357, 881, 1025
NcoI	CCATGG	1 cut(s)	2736
NlaIII	CATG	8 cut(s)	188, 326, 926, 1425, 1646, 2474, 2740, 2847
NlaIV	GGNNCC	7 cut(s)	100, 392, 406, 642, 1022, 1632, 2468
NmuCI	GTSAC	2 cut(s)	850, 1681
NspV	TTCGAA	1 cut(s)	1314
PaeR7I	CTCGAG	1 cut(s)	980
PagI	TCATGA	1 cut(s)	1642
PciSI	GCTCTTC	1 cut(s)	54
PctI	GAATGC	1 cut(s)	1063
PdmI	GAANNNNTTC	3 cut(s)	1254, 2232, 2421
PflFI	GACNNNGTC	1 cut(s)	2285
PfoI	TCCNGGA	1 cut(s)	2145
PkrI	GCNGC	9 cut(s)	144, 147, 660, 1351, 1354, 2312, 2390, 2891, 2894
PleI	GAGTC	4 cut(s)	229, 450, 2276, 2790
PpsI	GAGTC	4 cut(s)	229, 450, 2276, 2790
PpuMI	RGGWCCY	1 cut(s)	640
PshAI	GACNNNNGTC	1 cut(s)	1999
Psp124BI	GAGCTC	1 cut(s)	2483
Psp5II	RGGWCCY	1 cut(s)	640
Psp6I	CCWGG	2 cut(s)	2113, 2145
PspFI	CCCAGC	2 cut(s)	242, 1916
PspGI	CCWGG	2 cut(s)	2113, 2145
PspN4I	GGNNCC	7 cut(s)	100, 392, 406, 642, 1022, 1632, 2468
PspPI	GGNCC	9 cut(s)	447, 520, 640, 1020, 1187, 1280, 1436, 2614, 2894
PspPPI	RGGWCCY	1 cut(s)	640
PspXI	VCTCGAGB	1 cut(s)	980
PstI	CTGCAG	2 cut(s)	904, 1762
PstNI	CAGNNNCTG	2 cut(s)	1916, 2414
PsuI	RGATCY	4 cut(s)	1535, 1950, 2466, 2973
PsyI	GACNNNGTC	1 cut(s)	2285
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	6 cut(s)	321, 1113, 1362, 2020, 2842, 2882
RsaNI	GTAC	6 cut(s)	320, 1112, 1361, 2019, 2841, 2881
RseI	CAYNNNNRTG	4 cut(s)	492, 1323, 1572, 1829
SacI	GAGCTC	1 cut(s)	2483
SapI	GCTCTTC	1 cut(s)	54
SaqAI	TTAA	4 cut(s)	1551, 2031, 2219, 2451
SatI	GCNGC	9 cut(s)	143, 146, 659, 1350, 1353, 2311, 2389, 2890, 2893
Sau96I	GGNCC	9 cut(s)	447, 520, 640, 1020, 1187, 1280, 1436, 2614, 2894
SchI	GAGTC	4 cut(s)	229, 451, 2276, 2791
ScrFI	CCNGG	6 cut(s)	215, 357, 881, 1025, 2115, 2147
SduI	GDGCHC	6 cut(s)	66, 489, 2483, 2582, 2609, 2659
SfaNI	GCATC	1 cut(s)	255
SfcI	CTRYAG	5 cut(s)	418, 900, 1758, 1872, 1908
Sfr274I	CTCGAG	1 cut(s)	980
SfuI	TTCGAA	1 cut(s)	1314
SinI	GGWCC	7 cut(s)	520, 640, 1020, 1187, 1280, 1436, 2614
SlaI	CTCGAG	1 cut(s)	980
SmiMI	CAYNNNNRTG	4 cut(s)	492, 1323, 1572, 1829
SmlI	CTYRAG	7 cut(s)	89, 107, 980, 1107, 1232, 1373, 2766
SmoI	CTYRAG	7 cut(s)	89, 107, 980, 1107, 1232, 1373, 2766
SspMI	CTAG	7 cut(s)	813, 1001, 1589, 1866, 2075, 2568, 2648
SstI	GAGCTC	1 cut(s)	2483
StyD4I	CCNGG	6 cut(s)	213, 355, 879, 1023, 2113, 2145
StyI	CCWWGG	1 cut(s)	2736
TaaI	ACNGT	4 cut(s)	85, 848, 2209, 2825
TaiI	ACGT	2 cut(s)	2174, 2386
TatI	WGTACW	2 cut(s)	319, 2880
TauI	GCSGC	3 cut(s)	145, 148, 2895
Tru1I	TTAA	4 cut(s)	1551, 2031, 2219, 2451
Tru9I	TTAA	4 cut(s)	1551, 2031, 2219, 2451
TscAI	CASTG	5 cut(s)	434, 588, 851, 1806, 2253
TseFI	GTSAC	2 cut(s)	850, 1681
TseI	GCWGC	6 cut(s)	658, 1349, 1352, 2310, 2388, 2889
Tsp45I	GTSAC	2 cut(s)	850, 1681
TspGWI	ACGGA	4 cut(s)	48, 111, 785, 2966
TspRI	CASTG	5 cut(s)	434, 588, 851, 1806, 2253
Tth111I	GACNNNGTC	1 cut(s)	2285
VpaK11BI	GGWCC	7 cut(s)	520, 640, 1020, 1187, 1280, 1436, 2614
XagI	CCTNNNNNAGG	1 cut(s)	1235
XhoI	CTCGAG	1 cut(s)	980
XmiI	GTMKAC	1 cut(s)	417
XmnI	GAANNNNTTC	3 cut(s)	1254, 2232, 2421
XspI	CTAG	7 cut(s)	813, 1001, 1589, 1866, 2075, 2568, 2648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.