Prupe.8G085700_v2.0.a1

zinc finger CCCH domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
11875092 .. 11886854
11763 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G085700.1

Sequence Viewer

Length: 4794 bp
ATGGAAGCCGAAGAAGAAGATGTTTTGAAGGTGAACGAGCCTTCGGTTCCGGTTCAAAATGACGCCGTACTGTCTCCTGAAACACAGGAGGAGCTCCGGAGAACCGAGGCCCAATGCATGTCGGAGTCTTTACCCGAGCCCGAGCTCAAGCCCGAAACCGAGGGCTTTGGGCAGGGTGTTGAGGGGGAATCTGATGCGGTTCCAACAGAGGATACTGAGATTGTGGAGGAGCTGAATGTCGCAGAAGGTTATGGGACAGAGGATACTGAGATTGTGGAGGAACTGAATGTCGCAGAAGGTCATGGGACAGAGGATACTGAGATTGTGGAGGAGCTGAATGTCGCAGAAGGTTATGGGACAGAGGATACTGAGATTGTGGAGGAGCTGAATGTCGCTGAAGGTCATGGGACAGAGGATACTGAGATTGTGGAGGAGCTGAGTGTCGCCGAAGGTCAGGTGACAGAGGAAACTGAAGTTGGGGCCGTGGATGAAAAAGGATTGGAGACGGAGAAGGTGTTGTCCGAGGAAGGTGTTGTAGCTCACTCGGCAAAGGAGGCTGCTGAGAAGTCTAATGTGGCTGAAGTGGCTGAGGAGACTGTCATTTCATGGAAGGACCAAGCAGAGGAAAAGACGGCCGAAGTGGAAGCGGAGGAGGCCGAAGCAGAGGCTGAGAAGGTCCAAGCGGTGGGAGAGCAGGCTGAGGCAGAGGGTGAAAAGACTGAGGCTGAGGTGGAGGGAGATGATGAGGCAAATGTGACGGACATGGTGGCTGAGACCGACATGGTGGAGGAGGTGGATATGGCTGATGATGCAATGGAGGAGACAACTGAGGCAGAGGAGACAGAGGCAGCAGAGGAAGAAGCAGAAGGGATGGAGGTAGAGGAGGAGGAGGAGGATGAGGAAACGAATAGGGCCGGCAGTGGCGGGAAGAGGAAGCGTGGGAAGAGTTCTAAGGCGACGGGAAAACTCCTCTCAAAGAAGAAGATGGAAGAGGATGTCTGTTTCATTTGCTTTGATGGGGGTGAGCTTGTACTTTGTGATCGCAGGGGATGCCCTAAAGCATACCATCCTTCATGTGTTAATCGTGATGAGGCTTTCTTTCGGGCTAAGGGTCGATGGAATTGCGGTTGGCACCTTTGCAGCAACTGTGAGAAGAATGCCCACTACATGTGTTATACATGTACCTTTTCCTTGTGCAAGGGGTGTACCAAAGATGCTGTCTTCTTATGTGTTCGAGGAAACAAAGGCTTCTGTGAGACATGCATGAAAACTGTCATGTTGATTGAAAAGAATGAGCAAGGAAACAAGGACACGAATGAAGTTGATTTTGATGATAAAACCAGCTGGGAGTACCTCTTCAAGGATTATTGGATAGACTTAAAAGAGAGGTTATCTCTAACGGTTGATGAACTTGCTCAGGCCAAGAATCCATGGAAAGGAGCAACTGGACATAAACAGGAGTCACATGATGAACCTTATGATGTTAATAATGATGAAGGGTCTGAGTCAGACAATTCTGAGAATTTGGATTTGGCCAACTCTAAAAAAAGAAAGGCCAAGAAACGATTGAGATCCCGTGGAAAGGGGAAGGATTCATCAAGTCCAGCTACAGCAACTGGCTCTGGACGCCCATCTGCAGATGACAGTACAGGGTGGGGATCAAAGGAACTCTTGGAGTTTGTTATGCACATGAGAAATGGTGACAGATCTGCTCTATCTCAGTTTGATGTCCAGGCTCTTTTGCTAGAATATATAAAAAGGAACAAACTTCGTGACCCTCGCCGGAAAAGTCAGATAATTTGTGATATAAGGCTTCAAAATTTATTTGGGAAACCACGTGTTGGGCATTTTGAAATGTTAAAACTTCTGGAATCCCACTTTCTTGTAAAAGAGGATTCTCAGGCTGATGATCTTCAAGGGAGTGTTGTTGATACTGAAGGCAATCAGTTGGAGGCTGATGGAAACTCTGATACACCGGCAAAATCCGGTAAAGACAAGAGACGCAAAACACGTAAAAAGGGTGATGGGAGAGGACCACAGTCTAATATCGATGACTTTGCAGCCATTGATATACACAACATTAATTTAATTTACTTAAAGCGTAATTTAGTGGAAGATCTACTTGATGATCTGGATAACTTTGGGGACAAGGTTGCTCATTCTTTTGTCAGAATTAGAATTTCTGGTAGTGGTCAAAAGCAAGATTTGTATAGGCTGGTCCAAGTTATAGGTACATGCAAAGCTGCTGAGCCATATAAAGTTGGTAAAAGGATGACAGATATCTTGCTAGAGATATTAAACTTAAACAAGACAGAGATCATTTCAATTGACATCATCTCAAACCAAGACTTCACTGAGGATGAATGCAAACGACTGCGTCAGAGCATAAAATGTGGACTTATCAACCGGCTAACTGTGGGTGATGTTCAAGAGAAAGCGTTGGCACTCCAAGCAGTCAGAGTCAAAGACTGGTTAGAAACAGAGATAGTGAGACTCAGTCATCTTCGTGATCGAGCTAGTGAAAAAGGGCGTAGGAAGGAGCTTAGAGAGTGTGTAGAGAAATTGCAGCTACTGAAGACACCTGAGGAGCGCCAGCGTAGACTAGAGGAAACTCTAGAAATACATGTGGATCCAAATATGGATCCAAGTTATGAGTCCGAGGAAGATGAAGATGAAGGAGATGATAAAAAACAAGAAAGTTATATTAGACCTACAGGTTCTGGCTTTGGAAGGAAGGGGAGGGAGCCAATCTCTCCACGAAGAGCAGGACCTTCTTCAAATGATTCCTGGAGTGGGACAAGGAATTTTTCCAGTATGAATCGGGAGTTAAGCAGGAACATGTCAAATAAAGGGTTCTTCAACAAAGCAGAAAATACAACTGCAGCTGGTGAGATAGTAAATGATTCGTGGGGTCATGGAAGAGACAGAGAAACACAGCAAACAAACCACTGGGAGAAGAAACAAAATATTTCAAGTTTAGAAACCGGTGTTAGGAGTACACAGTCTGCAGTACCATCTGAATCATCTCCTGCTGGGGGGTCAGAAAATTCAGTGGTGCATCTCTCCACTGGTGTAGCACAATCTGCAGCCAATATCAATGAATCAGAAAAAATTTGGCATTACAAGGATCCTTCTGGAAAAGTCCAGGGACCATTTTCCATGGTACAGTTGCGTAAATGGAATCACACTGGCTATTTCCCTGCCAACTTGAGAGTTTGGAAAAACACTGAGAAAGAAGAAGATTCTATACTGGTAACTGATGCATTGGCTGGAAAGTTCCAGAAAGACCCTTCATTCGTTGACAGCAGTTTTCCAAAGGCTCAAATGGTGCATAATTCACATCTCTCACCTGTACATTCTGGGAAGTCTCAAGGAGCTCTCTTTCAGCGAGGTACAGAAGGCCAAGCGGGAGGAGTAAGTTGGGGATCTCAAAATGAAATTAATTCTTCCTCAGGCAGAGGTACTCCACAATCAGTTGAGGTCCCCAAGTATTCTTCAGATGGGTGGAGCACAACAAACCTTCCCTCACCTACTCCATCCCAAACTCCATTGGGTGGGGCAAGGGGGCAAGCTTACGAAAGTAATTGGTCACCCAGCCCTGCTCGTCCAGGTGGCTCTGTCTTGGGAGGCAACGGAGTGCTGCAACCTACTGCAGTAGTTACTCCAGAAAGTGCACTGCGAGCTTCTGGAAATGATCGCTCAAGTTCTCTTCCTGGCATTAATGCAGCACCCAAGTCTGAAAATGCTACTCTTCTGGGCTCTACAACTGCTCTTCGAATGCATGGTCAAGTAACAGGGTCAGCGCCTGTATTGTCCAATGCCTCAATGAATCAAGTAGCTGATGTGAATAACCTAGTTTCAAATCTGCAAAATCTGGTTCAGTCAGTGACTAGTCGTGCTCCTGCCAGCGATGCTCGAGGATGGGGTTCTGGTTCAGTTCCGAATCAGGAAATGACTGCCTCCGGCCCAGTACCTGGGAGTGAATCTCAACCTTGGGGAGGTGCTCCATCTCAAAGGATAGAACCAAATAATGCTGCTACTGTGCCTGCACAACATCACACCCATGGTTACTGGAATAACGCTCCATCTACCAACAATGCCCCCTCATCTATGAACACAGGGAATTTAGCTGGAAATTTCCCTACATCAGGCTTCTCGGGTGTTCCGCACTCTGATCCTTGGAGACCCCCAGTTCCGAGTAATCATACATACATTCAGCCTCCCGCACAACCGCAGGCACCTTGGGGCGTGGGAGTTCCAGATAGCCAAAGTGCTGTGCCAAGAACGGGGCAAGAGAATCAAAATACTAGTTGGGTGCCAATGGCAGGAAATCCAAATGTGACCTGGGGAGGACCGGTGCCTGGTAATACAAACATGAACTGGGGACCTCCGAGTCAAGGTCCAGGATGGACTGCACCCAGCCAAGGTCCTGTACCTGGAAATGCAGTTACTAATTGGGTCCCACCTGGTCAAGGACCACCATCGGTAAGTGCAAATCCAGGTTGGGCTCCACCTGGTCAAGGGCCAACACTTGGGAATGCCAATCCTGGTTGGAGTGCACCCAATGCAACTCAGAATGGAGATAGGTTCTCAAATCAAAGGGATCGAGGTTCTCATGGTGATCCTGGTTTCAGTGGTGGCAAACCTTGGAATAGGCAGTCATCTTTTGGTGGTGGAGGTGGGGGAGGAGGTTCTTCCAGGCCTCCTTTCAGAGGGCAGAGAGTGTGCAGGTTCTTCGAAAGTGGTCACTGCAAGAAGGGCGCGTCGTGCGATTATTTGCACCCGGACCATTAA

Protein Analysis

1598

Amino Acids

173.89

Weight (kDa)

4.88

Isoelectric Point (pI)

52.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 4392
Acc36I ACCTGC 1 cut(s) 4719
AccB1I GGYRCC 4 cut(s) 1131, 4237, 4315, 4357
AccB7I CCANNNNNTGG 5 cut(s) 685, 1841, 3554, 3974, 4532
AccI GTMKAC 1 cut(s) 2599
AccII CGCG 1 cut(s) 4763
AccIII TCCGGA 1 cut(s) 96
AciI CCGC 9 cut(s) 197, 647, 683, 924, 1125, 3407, 4166, 4224, 4232
AcoI YGGCCR 2 cut(s) 633, 1533
AcsI RAATTY 8 cut(s) 1522, 1819, 2178, 2803, 3046, 3111, 4123, 4135
AcuI CTGAAG 6 cut(s) 417, 492, 600, 1956, 2594, 3480
AcvI CACGTG 1 cut(s) 1838
AcyI GRCGYC 2 cut(s) 63, 1627
AflIII ACRYGT 6 cut(s) 1167, 1178, 1837, 2009, 2623, 2838
AgeI ACCGGT 2 cut(s) 2984, 4354
AhlI ACTAGT 2 cut(s) 3890, 4307
AjuI GAANNNNNNNTTGG 4 cut(s) 459, 491, 1514, 1546
Alw21I GWGCWC 8 cut(s) 96, 147, 3379, 3512, 3676, 3901, 4006, 4561
Alw44I GTGCAC 2 cut(s) 3672, 4557
AlwNI CAGNNNCTG 7 cut(s) 668, 1146, 1616, 2572, 2720, 3806, 3974
Ama87I CYCGRG 4 cut(s) 134, 140, 3915, 4156
Aor13HI TCCGGA 1 cut(s) 96
ApaLI GTGCAC 2 cut(s) 3672, 4557
ApoI RAATTY 8 cut(s) 1522, 1819, 2178, 2803, 3046, 3111, 4123, 4135
ArsI GACNNNNNNTTYG 6 cut(s) 1203, 1235, 3278, 3310, 3769, 3801
AseI ATTAAT 3 cut(s) 2082, 3441, 3720
AsiGI ACCGGT 2 cut(s) 2984, 4354
AspLEI GCGC 3 cut(s) 2592, 3805, 4763
AsuC2I CCSGG 1 cut(s) 4784
AsuII TTCGAA 2 cut(s) 3775, 4737
AvaI CYCGRG 4 cut(s) 134, 140, 3915, 4156
AxyI CCTNAGG 2 cut(s) 2583, 3451
BaeGI GKGCMC 2 cut(s) 3676, 4561
BalI TGGCCA 1 cut(s) 1535
BamHI GGATCC 3 cut(s) 2629, 2641, 3127
BanI GGYRCC 4 cut(s) 1131, 4237, 4315, 4357
BanII GRGCYC 6 cut(s) 96, 141, 147, 3379, 3761, 4510
BarI GAAGNNNNNNTAC 2 cut(s) 3231, 3263
BbrPI CACGTG 1 cut(s) 1838
BbsI GAAGAC 2 cut(s) 1213, 2582
Bbv12I GWGCWC 8 cut(s) 96, 147, 3379, 3512, 3676, 3901, 4006, 4561
BbvCI CCTCAGC 3 cut(s) 588, 699, 726
BceAI ACGGC 3 cut(s) 50, 467, 648
BcgI CGANNNNNNTGC 6 cut(s) 1104, 1138, 2039, 2073, 4717, 4751
BciVI GTATCC 5 cut(s) 205, 256, 307, 358, 409
BcnI CCSGG 1 cut(s) 4784
BcuI ACTAGT 2 cut(s) 3890, 4307
BfaI CTAG 8 cut(s) 1745, 2288, 2517, 2603, 2615, 3854, 3891, 4308
BfmI CTRYAG 7 cut(s) 1608, 1635, 2712, 2880, 3006, 3084, 3651
BfoI RGCGCY 2 cut(s) 2593, 3806
BfuAI ACCTGC 1 cut(s) 4719
BfuI GTATCC 5 cut(s) 205, 256, 307, 358, 409
BglII AGATCT 2 cut(s) 1706, 2116
BlpI GCTNAGC 1 cut(s) 2247
BmeT110I CYCGRG 4 cut(s) 134, 140, 3915, 4156
BmrI ACTGGG 4 cut(s) 2959, 3962, 4184, 4390
BmsI GCATC 7 cut(s) 184, 799, 1040, 1204, 3067, 3250, 3901
BmuI ACTGGG 4 cut(s) 2959, 3962, 4184, 4390
BoxI GACNNNNGTC 1 cut(s) 2038
BpiI GAAGAC 2 cut(s) 1213, 2582
BplI GAGNNNNNCTC 6 cut(s) 1378, 1410, 2735, 2767, 3970, 4002
BpmI CTGGAG 2 cut(s) 2809, 3648
Bpu10I CCTNAGC 5 cut(s) 588, 699, 726, 1107, 1416
Bpu1102I GCTNAGC 1 cut(s) 2247
Bpu14I TTCGAA 2 cut(s) 3775, 4737
BpuEI CTTGAG 4 cut(s) 131, 3229, 3354, 3685
BpuMI CCSGG 1 cut(s) 4784
Bsa29I ATCGAT 1 cut(s) 2049
BsaAI YACGTR 2 cut(s) 1838, 2012
BsaBI GATNNNNATC 1 cut(s) 1570
BsaHI GRCGYC 2 cut(s) 63, 1627
BsaI GGTCTC 2 cut(s) 767, 4177
BsaWI WCCGGW 5 cut(s) 49, 96, 1985, 2984, 4354
BsaXI ACNNNNNCTCC 4 cut(s) 500, 530, 4341, 4371
Bse118I RCCGGY 5 cut(s) 914, 1975, 2406, 2984, 4354
Bse21I CCTNAGG 2 cut(s) 2583, 3451
Bse3DI GCAATG 1 cut(s) 819
Bse8I GATNNNNATC 1 cut(s) 1570
BseAI TCCGGA 1 cut(s) 96
BseCI ATCGAT 1 cut(s) 2049
BseJI GATNNNNATC 1 cut(s) 1570
BseMI GCAATG 1 cut(s) 819
BseSI GKGCMC 2 cut(s) 3676, 4561
BseX3I CGGCCG 1 cut(s) 633
BseYI CCCAGC 4 cut(s) 1344, 3032, 3593, 4418
BsgI GTGCAG 3 cut(s) 4032, 4398, 4747
Bsh1236I CGCG 1 cut(s) 4763
Bsh1285I CGRYCG 1 cut(s) 636
BshNI GGYRCC 4 cut(s) 1131, 4237, 4315, 4357
BshTI ACCGGT 2 cut(s) 2984, 4354
BshVI ATCGAT 1 cut(s) 2049
BsiEI CGRYCG 1 cut(s) 636
BsiHKAI GWGCWC 8 cut(s) 96, 147, 3379, 3512, 3676, 3901, 4006, 4561
BsiHKCI CYCGRG 4 cut(s) 134, 140, 3915, 4156
BsmBI CGTCTC 2 cut(s) 497, 1993
BsmI GAATGC 4 cut(s) 1162, 2369, 3783, 4543
Bso31I GGTCTC 2 cut(s) 767, 4177
BsoBI CYCGRG 4 cut(s) 134, 140, 3915, 4156
Bsp119I TTCGAA 2 cut(s) 3775, 4737
Bsp13I TCCGGA 1 cut(s) 96
Bsp1407I TGTACA 1 cut(s) 3352
Bsp1720I GCTNAGC 1 cut(s) 2247
Bsp19I CCATGG 3 cut(s) 1430, 3159, 4063
BspACI CCGC 9 cut(s) 197, 647, 683, 924, 1125, 3407, 4166, 4224, 4232
BspDI ATCGAT 1 cut(s) 2049
BspEI TCCGGA 1 cut(s) 96
BspFNI CGCG 1 cut(s) 4763
BspMAI CTGCAG 5 cut(s) 1639, 2884, 3010, 3088, 3655
BspMI ACCTGC 1 cut(s) 4719
BspQI GCTCTTC 2 cut(s) 2755, 3777
BspT104I TTCGAA 2 cut(s) 3775, 4737
BspT107I GGYRCC 4 cut(s) 1131, 4237, 4315, 4357
BspTNI GGTCTC 2 cut(s) 767, 4177
BsrDI GCAATG 1 cut(s) 819
BsrFI RCCGGY 5 cut(s) 914, 1975, 2406, 2984, 4354
BsrGI TGTACA 1 cut(s) 3352
BssAI RCCGGY 5 cut(s) 914, 1975, 2406, 2984, 4354
BssNI GRCGYC 2 cut(s) 63, 1627
BssT1I CCWWGG 8 cut(s) 1430, 3159, 3992, 4063, 4178, 4241, 4423, 4646
Bst6I CTCTTC 9 cut(s) 923, 938, 984, 1361, 2755, 2914, 3714, 3756, 3777
BstACI GRCGYC 2 cut(s) 63, 1627
BstAPI GCANNNNNTGC 3 cut(s) 1050, 3083, 4565
BstAUI TGTACA 1 cut(s) 3352
BstBAI YACGTR 2 cut(s) 1838, 2012
BstBI TTCGAA 2 cut(s) 3775, 4737
BstC8I GCNNGC 8 cut(s) 696, 916, 2594, 3570, 3681, 3907, 4047, 4236
BstDSI CCRYGG 5 cut(s) 483, 1430, 1576, 3159, 4063
BstEII GGTNACC 1 cut(s) 3588
BstENI CCTNNNNNAGG 6 cut(s) 1358, 3996, 4146, 4470, 4518, 4710
BstFNI CGCG 1 cut(s) 4763
BstH2I RGCGCY 2 cut(s) 2593, 3806
BstHHI GCGC 3 cut(s) 2592, 3805, 4763
BstMCI CGRYCG 1 cut(s) 636
BstNSI RCATGY 7 cut(s) 121, 1171, 1182, 1263, 2238, 2627, 2842
BstPAI GACNNNNGTC 1 cut(s) 2038
BstPI GGTNACC 1 cut(s) 3588
BstSFI CTRYAG 7 cut(s) 1608, 1635, 2712, 2880, 3006, 3084, 3651
BstSLI GKGCMC 2 cut(s) 3676, 4561
BstUI CGCG 1 cut(s) 4763
BstV2I GAAGAC 2 cut(s) 1213, 2582
BstX2I RGATCY 7 cut(s) 1571, 1706, 2116, 2629, 2641, 3127, 3425
BstYI RGATCY 7 cut(s) 1571, 1706, 2116, 2629, 2641, 3127, 3425
BstZI CGGCCG 1 cut(s) 633
Bsu15I ATCGAT 1 cut(s) 2049
Bsu36I CCTNAGG 2 cut(s) 2583, 3451
BsuI GTATCC 5 cut(s) 205, 256, 307, 358, 409
BsuTUI ATCGAT 1 cut(s) 2049
BtgI CCRYGG 5 cut(s) 483, 1430, 1576, 3159, 4063
BtgZI GCGATG 1 cut(s) 3924
BtsI GCAGTG 3 cut(s) 925, 3674, 4747
BveI ACCTGC 1 cut(s) 4719
Cac8I GCNNGC 8 cut(s) 696, 916, 2594, 3570, 3681, 3907, 4047, 4236
CaiI CAGNNNCTG 7 cut(s) 668, 1146, 1616, 2572, 2720, 3806, 3974
CfoI GCGC 3 cut(s) 2592, 3805, 4763
Cfr10I RCCGGY 5 cut(s) 914, 1975, 2406, 2984, 4354
ClaI ATCGAT 1 cut(s) 2049
CseI GACGC 5 cut(s) 71, 1635, 2010, 2366, 4752
CsiI ACCWGGT 2 cut(s) 4465, 4513
CspAI ACCGGT 2 cut(s) 2984, 4354
DrdI GACNNNNNNGTC 1 cut(s) 4392
DseDI GACNNNNNNGTC 1 cut(s) 4392
EaeI YGGCCR 2 cut(s) 633, 1533
EagI CGGCCG 1 cut(s) 633
Eam1104I CTCTTC 9 cut(s) 923, 938, 984, 1361, 2755, 2914, 3714, 3756, 3777
EarI CTCTTC 9 cut(s) 923, 938, 984, 1361, 2755, 2914, 3714, 3756, 3777
Ecl136II GAGCTC 3 cut(s) 94, 145, 3377
EclXI CGGCCG 1 cut(s) 633
Eco130I CCWWGG 8 cut(s) 1430, 3159, 3992, 4063, 4178, 4241, 4423, 4646
Eco147I AGGCCT 1 cut(s) 4702
Eco24I GRGCYC 6 cut(s) 96, 141, 147, 3379, 3761, 4510
Eco31I GGTCTC 2 cut(s) 767, 4177
Eco32I GATATC 1 cut(s) 2281
Eco52I CGGCCG 1 cut(s) 633
Eco53kI GAGCTC 3 cut(s) 94, 145, 3377
Eco57I CTGAAG 6 cut(s) 417, 492, 600, 1956, 2594, 3480
Eco72I CACGTG 1 cut(s) 1838
Eco81I CCTNAGG 2 cut(s) 2583, 3451
Eco88I CYCGRG 4 cut(s) 134, 140, 3915, 4156
Eco91I GGTNACC 1 cut(s) 3588
EcoICRI GAGCTC 3 cut(s) 94, 145, 3377
EcoNI CCTNNNNNAGG 6 cut(s) 1358, 3996, 4146, 4470, 4518, 4710
EcoO109I RGGNCCY 5 cut(s) 2768, 3481, 4385, 4427, 4459
EcoO65I GGTNACC 1 cut(s) 3588
EcoRV GATATC 1 cut(s) 2281
EcoT14I CCWWGG 8 cut(s) 1430, 3159, 3992, 4063, 4178, 4241, 4423, 4646
EcoT22I ATGCAT 4 cut(s) 119, 1265, 3265, 3783
EcoT38I GRGCYC 6 cut(s) 96, 141, 147, 3379, 3761, 4510
ErhI CCWWGG 8 cut(s) 1430, 3159, 3992, 4063, 4178, 4241, 4423, 4646
Esp3I CGTCTC 2 cut(s) 497, 1993
FalI AAGNNNNNCTT 4 cut(s) 1655, 1687, 2106, 2138
FauI CCCGC 3 cut(s) 917, 3400, 4231
FblI GTMKAC 1 cut(s) 2599
FriOI GRGCYC 6 cut(s) 96, 141, 147, 3379, 3761, 4510
FspBI CTAG 8 cut(s) 1745, 2288, 2517, 2603, 2615, 3854, 3891, 4308
GlaI GCGC 3 cut(s) 2591, 3804, 4762
GsaI CCCAGC 4 cut(s) 1348, 3036, 3597, 4422
GsuI CTGGAG 2 cut(s) 2809, 3648
HaeII RGCGCY 2 cut(s) 2593, 3806
HgaI GACGC 5 cut(s) 71, 1635, 2010, 2366, 4752
HhaI GCGC 3 cut(s) 2592, 3805, 4763
Hin1I GRCGYC 2 cut(s) 63, 1627
Hin6I GCGC 3 cut(s) 2590, 3803, 4761
HinP1I GCGC 3 cut(s) 2590, 3803, 4761
HincII GTYRAC 1 cut(s) 3301
HindII GTYRAC 1 cut(s) 3301
HindIII AAGCTT 1 cut(s) 3570
Hpy166II GTNNAC 8 cut(s) 34, 1206, 2396, 2600, 2999, 3301, 3674, 4559
Hpy8I GTNNAC 8 cut(s) 34, 1206, 2396, 2600, 2999, 3301, 3674, 4559
Hpy99I CGWCG 2 cut(s) 961, 4768
HpyCH4IV ACGT 2 cut(s) 1837, 2011
HpySE526I ACGT 2 cut(s) 1837, 2011
Hsp92I GRCGYC 2 cut(s) 63, 1627
HspAI GCGC 3 cut(s) 2590, 3803, 4761
KflI GGGWCCC 1 cut(s) 4459
Kpn2I TCCGGA 1 cut(s) 96
KroI GCCGGC 1 cut(s) 914
KroNI GCCGGC 1 cut(s) 916
LguI GCTCTTC 2 cut(s) 2755, 3777
LweI GCATC 7 cut(s) 184, 799, 1040, 1204, 3067, 3250, 3901
MabI ACCWGGT 2 cut(s) 4465, 4513
MaeI CTAG 8 cut(s) 1745, 2288, 2517, 2603, 2615, 3854, 3891, 4308
MaeII ACGT 2 cut(s) 1837, 2011
MfeI CAATTG 1 cut(s) 2325
MflI RGATCY 7 cut(s) 1571, 1706, 2116, 2629, 2641, 3127, 3425
MlsI TGGCCA 1 cut(s) 1535
MluNI TGGCCA 1 cut(s) 1535
MlyI GAGTC 7 cut(s) 134, 1469, 1514, 2469, 2487, 2663, 4402
MmeI TCCRAC 4 cut(s) 102, 227, 1929, 4532
Mox20I TGGCCA 1 cut(s) 1535
Mph1103I ATGCAT 4 cut(s) 119, 1265, 3265, 3783
MroI TCCGGA 1 cut(s) 96
MroNI GCCGGC 1 cut(s) 914
MscI TGGCCA 1 cut(s) 1535
MslI CAYNNNNRTG 2 cut(s) 2505, 4062
Msp20I TGGCCA 1 cut(s) 1535
MspA1I CMGCKG 2 cut(s) 1344, 2885
MunI CAATTG 1 cut(s) 2325
Mva1269I GAATGC 4 cut(s) 1162, 2369, 3783, 4543
MvnI CGCG 1 cut(s) 4763
NaeI GCCGGC 1 cut(s) 916
NciI CCSGG 1 cut(s) 4784
NcoI CCATGG 3 cut(s) 1430, 3159, 4063
NgoMIV GCCGGC 1 cut(s) 914
NmeAIII GCCGAG 1 cut(s) 524
NmuCI GTSAC 9 cut(s) 457, 754, 1461, 1700, 1772, 3588, 3886, 4339, 4745
NsiI ATGCAT 4 cut(s) 119, 1265, 3265, 3783
NspI RCATGY 7 cut(s) 121, 1171, 1182, 1263, 2238, 2627, 2842
NspV TTCGAA 2 cut(s) 3775, 4737
PaeR7I CTCGAG 1 cut(s) 3915
PceI AGGCCT 1 cut(s) 4702
PciI ACATGT 4 cut(s) 1167, 1178, 2623, 2838
PciSI GCTCTTC 2 cut(s) 2755, 3777
PcsI WCGNNNNNNNCGW 1 cut(s) 2008
PctI GAATGC 4 cut(s) 1162, 2369, 3783, 4543
PdiI GCCGGC 1 cut(s) 916
PflFI GACNNNGTC 2 cut(s) 2376, 2496
PflMI CCANNNNNTGG 5 cut(s) 685, 1841, 3554, 3974, 4532
PfoI TCCNGGA 2 cut(s) 2786, 4402
PinAI ACCGGT 2 cut(s) 2984, 4354
PleI GAGTC 7 cut(s) 133, 1468, 1513, 2468, 2487, 2662, 4401
PmaCI CACGTG 1 cut(s) 1838
PmlI CACGTG 1 cut(s) 1838
PpsI GAGTC 7 cut(s) 133, 1468, 1513, 2468, 2487, 2662, 4401
Ppu21I YACGTR 2 cut(s) 1838, 2012
PpuMI RGGWCCY 5 cut(s) 2768, 3481, 4385, 4427, 4459
PscI ACATGT 4 cut(s) 1167, 1178, 2623, 2838
PshAI GACNNNNGTC 1 cut(s) 2038
PshBI ATTAAT 3 cut(s) 2082, 3441, 3720
Psp124BI GAGCTC 3 cut(s) 96, 147, 3379
Psp5II RGGWCCY 5 cut(s) 2768, 3481, 4385, 4427, 4459
PspCI CACGTG 1 cut(s) 1838
PspEI GGTNACC 1 cut(s) 3588
PspFI CCCAGC 4 cut(s) 1344, 3032, 3593, 4418
PspPPI RGGWCCY 5 cut(s) 2768, 3481, 4385, 4427, 4459
PspXI VCTCGAGB 1 cut(s) 3915
PstI CTGCAG 5 cut(s) 1639, 2884, 3010, 3088, 3655
PstNI CAGNNNCTG 7 cut(s) 668, 1146, 1616, 2572, 2720, 3806, 3974
PsuI RGATCY 7 cut(s) 1571, 1706, 2116, 2629, 2641, 3127, 3425
PsyI GACNNNGTC 2 cut(s) 2376, 2496
PvuII CAGCTG 2 cut(s) 1344, 2885
RseI CAYNNNNRTG 2 cut(s) 2505, 4062
SacI GAGCTC 3 cut(s) 96, 147, 3379
SapI GCTCTTC 2 cut(s) 2755, 3777
SchI GAGTC 7 cut(s) 134, 1469, 1514, 2469, 2487, 2663, 4402
SexAI ACCWGGT 2 cut(s) 4465, 4513
SfaNI GCATC 7 cut(s) 184, 799, 1040, 1204, 3067, 3250, 3901
SfcI CTRYAG 7 cut(s) 1608, 1635, 2712, 2880, 3006, 3084, 3651
Sfr274I CTCGAG 1 cut(s) 3915
SfuI TTCGAA 2 cut(s) 3775, 4737
SlaI CTCGAG 1 cut(s) 3915
SmiMI CAYNNNNRTG 2 cut(s) 2505, 4062
SmlI CTYRAG 5 cut(s) 146, 3208, 3369, 3700, 3915
SmoI CTYRAG 5 cut(s) 146, 3208, 3369, 3700, 3915
SpeI ACTAGT 2 cut(s) 3890, 4307
SseBI AGGCCT 1 cut(s) 4702
SsiI CCGC 9 cut(s) 197, 647, 683, 924, 1125, 3407, 4166, 4224, 4232
SspI AATATT 1 cut(s) 2968
SspMI CTAG 8 cut(s) 1745, 2288, 2517, 2603, 2615, 3854, 3891, 4308
SstI GAGCTC 3 cut(s) 96, 147, 3379
StuI AGGCCT 1 cut(s) 4702
StyI CCWWGG 8 cut(s) 1430, 3159, 3992, 4063, 4178, 4241, 4423, 4646
TaiI ACGT 2 cut(s) 1840, 2014
TaqI TCGA 8 cut(s) 1114, 1234, 2049, 2512, 3775, 3916, 4606, 4737
TaqII GACCGA 1 cut(s) 791
TatI WGTACW 4 cut(s) 1030, 1646, 2996, 3352
TseFI GTSAC 9 cut(s) 457, 754, 1461, 1700, 1772, 3588, 3886, 4339, 4745
Tsp45I GTSAC 9 cut(s) 457, 754, 1461, 1700, 1772, 3588, 3886, 4339, 4745
TspGWI ACGGA 3 cut(s) 521, 773, 3648
Tth111I GACNNNGTC 2 cut(s) 2376, 2496
Van91I CCANNNNNTGG 5 cut(s) 685, 1841, 3554, 3974, 4532
VneI GTGCAC 2 cut(s) 3672, 4557
VspI ATTAAT 3 cut(s) 2082, 3441, 3720
XagI CCTNNNNNAGG 6 cut(s) 1358, 3996, 4146, 4470, 4518, 4710
XapI RAATTY 8 cut(s) 1522, 1819, 2178, 2803, 3046, 3111, 4123, 4135
XbaI TCTAGA 1 cut(s) 2614
XceI RCATGY 7 cut(s) 121, 1171, 1182, 1263, 2238, 2627, 2842
XcmI CCANNNNNNNNNTGG 1 cut(s) 4341
XhoI CTCGAG 1 cut(s) 3915
XmiI GTMKAC 1 cut(s) 2599
XspI CTAG 8 cut(s) 1745, 2288, 2517, 2603, 2615, 3854, 3891, 4308
Zsp2I ATGCAT 4 cut(s) 119, 1265, 3265, 3783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.