Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004607

Physical Location & Seq

Genomic Coordinates Forward (+)

5527571 .. 5532441

Gene Structure 4871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g04700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGACTGTGGCCGGTGGTCATGTGACAGAGGACACTGAGGTTGTGAAGGGGATGAATGTGGCTGAAGGTTATAGCACAGAGGAAGCTGAGGTTGGGGATGTGGATGATGAGGTGGAGACAGAGGTGAAGGTGTTGCCTGAGGAAGCTGCTGTGGCTAACTCGGACAAGCAGGAGGCTGAGGATTCTAATGTGGCTGAAACGGCTGAGGAGACTGTGCTTTCAGTGAAGGATGAAACAGAGCAAATGACGGGTGAAGCCAAGGGAGGTGAGGTTGAGGCCGAGACAGTGGGAGAGGAGACTGAGACCGAGGTGGAAGGAGAGGAGGATGGGAACGAGACGGTGGGAGAGGAGGATGGGAACGAGGCGGTGGGAGAGGAGGATGGGAGTGAAGCGGTGGGAGAGGAGGATGTGAATGAGGCGGTGGGAGTGGAGGCAGAGGCCGAAGCGGAGGGAGAGGAGGCTGAGGCCGAAGCAGAAGGAGAGGAGGCTGAAGCAGGGGGAGATGATGAGGAGAATGCGGCAGACATTTTGACTGAGACTGACACAGTTGGGGAGTTGGATATGGTTGATGATGTAATGGAGGAGACAACTGAGGCAGAGGAGACGGGGGCGGCAGAGGAAGAAGCAGAAGAAATGGAGGTGGAAGAGGAGGAGGAGACAAAAAGAGCCGGCAGTGGTGGGAAGAGGAAGCGTGTGAAGAGTTCTAAGGACACGGGAAAACTCCTCTCAAAGAAGAAAATGGAAGAGGATGTCTGTTTCATTTGCTTTGATGGGGGTGAGCTTGTGCTTTGTGACCGCAGGGGATGTCCCAAAGCATACCATCCTTCATGTGTTAATCGTGATGAGGCCTTCTTTCGAGCCAAGGGTCGATGGAATTGCGGTTGGCACCTTTGTAGCAACTGTGAAAAGAGTGCCCACTACATGTGTTATACATGCACCTTTTCCTTGTGCAAGGCGTGTATCAAAGATGCTGTTATCTTATGTGTTCGAGGAAACAAAGGCTTCTGTGAGACATGCATGAAAACTATCATGATGATTGAAAAGAATGAGCAAGGAAACAAGGACAAGGATGAAGTTGATTTTGATGATAAAAGCAGCTGGGAGTACCTCTTCAAGGATTATTGGATAGACTTAAAAGAGAAGTTATCTCTAACGCTTGATGACCTTGCTCAGGCCAAGAATCCAAGGAAAGGATCAACTGGACGTGCTAATAAACAGGAGTCACGTGATGAACCCTATGATGCTAATGATGGTGGAGGGTCTGATTCTGACAACTCTGAGAATTTGGATTTAGTTAACCCTAAAAAAAGAAAGTCCAAAAAACGAATGAGAACCCGTGCAAAGGGGAGGGATTCATCAAGTGCAGCTACAGCAACTGGCTCTGGAGGTCCATCTGCAGATGACAGTACAGGGTGGGCATCAAAGGAACTTCTGGAGTTTGTAATGCACATGAGAGATGGTGACGAGTCTGCTTTATCTCAGTTTGATGTCCAGGCTCTCTTGCTAGAATATATAAAAAGGAACAAACTTCGTGACCCTCGGCGAAAAAGTCAGATAGTTTGTGATATAAGGCTTCAAAATTTATTTGGGAAACCACGCGTTGGGCATTTTGAAATGTTAAAGCTTCTTGAATCCCACTTTCTTGTAAAAGAGGATGCTCACACTGATGATCTTCAAGGGAGTGTTGTTGATACCGATGACAATCAGTTGGAGGTTGATGGCAACTCTGATACCCCAGTAAAGGCCAGTAAAGATAAGAGACGTAAAGCACGTAAAAAGGGTGATGGGAAAGGACCTCAATCTAATATTGACGAATTTGCAGCCATTGATATGCATAACATCAATTTAATTTTCTTAAGGCGTAATTTAGTGGAAGATCTACTTGATCGATCTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0010964 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031935 GO:0032259 GO:0032776 GO:0033043 GO:0033044 GO:0034641 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0044728 GO:0046483 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:1901360 GO:1902275 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GYF Plus-3 SWIB zf-CCCH

Protein Analysis

633

Amino Acids

69.62

Weight (kDa)

4.43

Isoelectric Point (pI)

47.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIB	PF02201	474 - 547	3e-15	SWIB/MDM2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004607)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16485 AT2G16485
fragaria_vesca	FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320
malus_domestica	MD00G1040500.v1.1 MD10G1064000.v1.1
prunus_persica	Prupe.8G085700_v2.0.a1
pyrus_communis	pycom05g04690 pycom05g04700 pycom10g04950 pycom10g04960
rosa_chinensis	RchiOBHm_Chr6g0267521
rosa_laevigata	RLG00000013994
rosa_multiflora	Rmu_co8013812.1_g000001 Rmu_co8150174.1_g000001 Rmu_sc0008030.1_g000001 Rmu_sc0012005.1_g000009
rosa_roxburghii	Rroxscaffold_7G00200660
rosa_rugosa	Rorug06G0033200 Rorug06G0033300 Rorug06G0033400
rosa_samantha	Rh6AG154800 Rh6BG155500 Rh6CG150700 Rh6DG140700
rosa_wichuraiana	Rw6G013290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	885
AccB7I	CCANNNNNTGG	1 cut(s)	1601
AccII	CGCG	1 cut(s)	1599
AciI	CCGC	8 cut(s)	365, 392, 419, 446, 518, 611, 796, 879
AclWI	GGATC	1 cut(s)	1201
AcoI	YGGCCR	1 cut(s)	9
AcsI	RAATTY	3 cut(s)	1282, 1579, 1814
AcuI	CTGAAG	2 cut(s)	84, 510
AcvI	CACGTG	1 cut(s)	1226
AfaI	GTAC	2 cut(s)	1106, 1408
AfiI	CCNNNNNNNGG	6 cut(s)	1114, 1171, 1190, 1342, 1601, 1741
AflII	CTTAAG	1 cut(s)	1855
AflIII	ACRYGT	2 cut(s)	921, 1597
AgsI	TTSAA	6 cut(s)	1040, 1114, 1577, 1613, 1631, 1676
AjiI	CACGTC	1 cut(s)	1205
AjnI	CCWGG	1 cut(s)	1491
AjuI	GAANNNNNNNTTGG	2 cut(s)	75, 107
AluBI	AGCT	6 cut(s)	86, 146, 781, 1098, 1367, 1624
AluI	AGCT	6 cut(s)	86, 146, 781, 1098, 1367, 1624
AlwI	GGATC	1 cut(s)	1201
AlwNI	CAGNNNCTG	1 cut(s)	1376
AoxI	GGCC	7 cut(s)	9, 276, 438, 465, 846, 1173, 1743
ApeKI	GCWGC	4 cut(s)	146, 1095, 1364, 1820
ApoI	RAATTY	3 cut(s)	1282, 1579, 1814
AspS9I	GGNCC	2 cut(s)	1388, 1793
AsuHPI	GGTGA	6 cut(s)	136, 263, 278, 788, 1472, 1793
AvaII	GGWCC	2 cut(s)	1388, 1793
AxyI	CCTNAGG	1 cut(s)	138
BaeGI	GKGCMC	1 cut(s)	916
BaeI	ACNNNNGTAYC	2 cut(s)	1722, 1755
BanI	GGYRCC	1 cut(s)	885
BbrPI	CACGTG	1 cut(s)	1226
BbvCI	CCTCAGC	4 cut(s)	87, 177, 204, 462
BbvI	GCAGC	4 cut(s)	133, 1107, 1376, 1832
BceAI	ACGGC	1 cut(s)	216
BcgI	CGANNNNNNTGC	2 cut(s)	858, 892
BciT130I	CCWGG	1 cut(s)	1493
BfaI	CTAG	1 cut(s)	1505
BfmI	CTRYAG	2 cut(s)	1368, 1395
BfrI	CTTAAG	1 cut(s)	1855
BglII	AGATCT	1 cut(s)	1876
BisI	GCNGC	6 cut(s)	147, 519, 612, 1096, 1365, 1821
BlsI	GCNGC	6 cut(s)	148, 520, 613, 1097, 1366, 1822
Bme1390I	CCNGG	1 cut(s)	1493
Bme18I	GGWCC	2 cut(s)	1388, 1793
BmgBI	CACGTC	1 cut(s)	1205
BmgT120I	GGNCC	2 cut(s)	1388, 1793
BmiI	GGNNCC	1 cut(s)	887
BmrFI	CCNGG	1 cut(s)	1493
BmrI	ACTGGG	1 cut(s)	1730
BmsI	GCATC	4 cut(s)	958, 1231, 1427, 1645
BmuI	ACTGGG	1 cut(s)	1730
BpmI	CTGGAG	2 cut(s)	1404, 1454
Bpu10I	CCTNAGC	5 cut(s)	87, 177, 204, 462, 1170
Bsa29I	ATCGAT	1 cut(s)	1888
BsaAI	YACGTR	2 cut(s)	1226, 1772
BsaBI	GATNNNNATC	1 cut(s)	1701
BsaI	GGTCTC	1 cut(s)	296
BsaJI	CCNNGG	5 cut(s)	258, 306, 861, 1184, 1538
BsaXI	ACNNNNNCTCC	2 cut(s)	255, 285
Bsc4I	CCNNNNNNNGG	6 cut(s)	1114, 1171, 1190, 1342, 1601, 1741
Bse118I	RCCGGY	2 cut(s)	11, 668
Bse1I	ACTGG	4 cut(s)	1204, 1381, 1736, 1746
Bse21I	CCTNAGG	1 cut(s)	138
Bse8I	GATNNNNATC	1 cut(s)	1701
BseBI	CCWGG	1 cut(s)	1493
BseCI	ATCGAT	1 cut(s)	1888
BseDI	CCNNGG	5 cut(s)	258, 306, 861, 1184, 1538
BseJI	GATNNNNATC	1 cut(s)	1701
BseLI	CCNNNNNNNGG	6 cut(s)	1114, 1171, 1190, 1342, 1601, 1741
BseNI	ACTGG	4 cut(s)	1204, 1381, 1736, 1746
BseSI	GKGCMC	1 cut(s)	916
BseXI	GCAGC	4 cut(s)	133, 1107, 1376, 1832
BseYI	CCCAGC	1 cut(s)	1098
BsgI	GTGCAG	1 cut(s)	1383
Bsh1236I	CGCG	1 cut(s)	1599
BshFI	GGCC	7 cut(s)	11, 278, 440, 467, 848, 1175, 1745
BshNI	GGYRCC	1 cut(s)	885
BshVI	ATCGAT	1 cut(s)	1888
BsiSI	CCGG	2 cut(s)	12, 669
BslFI	GGGAC	1 cut(s)	792
BslI	CCNNNNNNNGG	6 cut(s)	1114, 1171, 1190, 1342, 1601, 1741
BsmBI	CGTCTC	3 cut(s)	329, 596, 1753
BsmFI	GGGAC	1 cut(s)	792
BsmI	GAATGC	1 cut(s)	520
BsnI	GGCC	7 cut(s)	11, 278, 440, 467, 848, 1175, 1745
Bso31I	GGTCTC	1 cut(s)	296
Bsp1286I	GDGCHC	1 cut(s)	916
Bsp143I	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
BspACI	CCGC	8 cut(s)	365, 392, 419, 446, 518, 611, 796, 879
BspANI	GGCC	7 cut(s)	11, 278, 440, 467, 848, 1175, 1745
BspDI	ATCGAT	1 cut(s)	1888
BspFNI	CGCG	1 cut(s)	1599
BspHI	TCATGA	1 cut(s)	1029
BspLI	GGNNCC	1 cut(s)	887
BspMAI	CTGCAG	1 cut(s)	1399
BspPI	GGATC	1 cut(s)	1201
BspT107I	GGYRCC	1 cut(s)	885
BspTI	CTTAAG	1 cut(s)	1855
BspTNI	GGTCTC	1 cut(s)	296
BsrFI	RCCGGY	2 cut(s)	11, 668
BsrI	ACTGG	4 cut(s)	1204, 1381, 1736, 1746
BssAI	RCCGGY	2 cut(s)	11, 668
BssECI	CCNNGG	5 cut(s)	258, 306, 861, 1184, 1538
BssMI	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
BssT1I	CCWWGG	3 cut(s)	258, 861, 1184
Bst2UI	CCWGG	1 cut(s)	1493
Bst4CI	ACNGT	7 cut(s)	7, 214, 286, 340, 547, 902, 1406
Bst6I	CTCTTC	5 cut(s)	639, 677, 692, 738, 1115
BstAFI	CTTAAG	1 cut(s)	1855
BstBAI	YACGTR	2 cut(s)	1226, 1772
BstC8I	GCNNGC	1 cut(s)	670
BstENI	CCTNNNNNAGG	2 cut(s)	1112, 1169
BstFNI	CGCG	1 cut(s)	1599
BstKTI	GATC	5 cut(s)	1196, 1672, 1879, 1888, 1892
BstMBI	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
BstMWI	GCNNNNNNNGC	3 cut(s)	152, 200, 1370
BstNI	CCWGG	1 cut(s)	1493
BstNSI	RCATGY	3 cut(s)	925, 936, 1017
BstSCI	CCNGG	1 cut(s)	1491
BstSFI	CTRYAG	2 cut(s)	1368, 1395
BstSLI	GKGCMC	1 cut(s)	916
BstUI	CGCG	1 cut(s)	1599
BstV1I	GCAGC	4 cut(s)	133, 1107, 1376, 1832
BstX2I	RGATCY	1 cut(s)	1876
BstYI	RGATCY	1 cut(s)	1876
Bsu15I	ATCGAT	1 cut(s)	1888
Bsu36I	CCTNAGG	1 cut(s)	138
BsuRI	GGCC	7 cut(s)	11, 278, 440, 467, 848, 1175, 1745
BsuTUI	ATCGAT	1 cut(s)	1888
BtrI	CACGTC	1 cut(s)	1205
BtsI	GCAGTG	1 cut(s)	679
BtsIMutI	CAGTG	5 cut(s)	33, 228, 291, 679, 1662
Cac8I	GCNNGC	1 cut(s)	670
CaiI	CAGNNNCTG	1 cut(s)	1376
CciI	TCATGA	1 cut(s)	1029
Cfr10I	RCCGGY	2 cut(s)	11, 668
Cfr13I	GGNCC	2 cut(s)	1388, 1793
ClaI	ATCGAT	1 cut(s)	1888
Csp6I	GTAC	2 cut(s)	1105, 1407
CviAII	CATG	8 cut(s)	20, 828, 922, 933, 1014, 1018, 1030, 1450
CviQI	GTAC	2 cut(s)	1105, 1407
DpnI	GATC	5 cut(s)	1195, 1671, 1878, 1887, 1891
DpnII	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
EaeI	YGGCCR	1 cut(s)	9
Eam1104I	CTCTTC	5 cut(s)	639, 677, 692, 738, 1115
EarI	CTCTTC	5 cut(s)	639, 677, 692, 738, 1115
Eco130I	CCWWGG	3 cut(s)	258, 861, 1184
Eco147I	AGGCCT	1 cut(s)	848
Eco31I	GGTCTC	1 cut(s)	296
Eco47I	GGWCC	2 cut(s)	1388, 1793
Eco57I	CTGAAG	2 cut(s)	84, 510
Eco72I	CACGTG	1 cut(s)	1226
Eco81I	CCTNAGG	1 cut(s)	138
EcoNI	CCTNNNNNAGG	2 cut(s)	1112, 1169
EcoO109I	RGGNCCY	1 cut(s)	1793
EcoRII	CCWGG	1 cut(s)	1491
EcoT14I	CCWWGG	3 cut(s)	258, 861, 1184
EcoT22I	ATGCAT	2 cut(s)	1019, 1836
ErhI	CCWWGG	3 cut(s)	258, 861, 1184
Esp3I	CGTCTC	3 cut(s)	329, 596, 1753
FaeI	CATG	8 cut(s)	23, 831, 925, 936, 1017, 1021, 1033, 1453
FalI	AAGNNNNNCTT	2 cut(s)	1866, 1898
FaqI	GGGAC	1 cut(s)	792
FatI	CATG	8 cut(s)	19, 827, 921, 932, 1013, 1017, 1029, 1449
Fnu4HI	GCNGC	6 cut(s)	147, 519, 612, 1096, 1365, 1821
Fsp4HI	GCNGC	6 cut(s)	147, 519, 612, 1096, 1365, 1821
FspBI	CTAG	1 cut(s)	1505
GluI	GCNGC	6 cut(s)	147, 519, 612, 1096, 1365, 1821
GsaI	CCCAGC	1 cut(s)	1102
GsuI	CTGGAG	2 cut(s)	1404, 1454
HaeIII	GGCC	7 cut(s)	11, 278, 440, 467, 848, 1175, 1745
HapII	CCGG	2 cut(s)	12, 669
Hin1II	CATG	8 cut(s)	23, 831, 925, 936, 1017, 1021, 1033, 1453
HincII	GTYRAC	1 cut(s)	1297
HindII	GTYRAC	1 cut(s)	1297
HindIII	AAGCTT	1 cut(s)	1622
HinfI	GANTC	7 cut(s)	182, 1180, 1220, 1265, 1352, 1466, 1631
HpaI	GTTAAC	1 cut(s)	1297
HpaII	CCGG	2 cut(s)	12, 669
HphI	GGTGA	6 cut(s)	136, 263, 278, 788, 1472, 1793
Hpy166II	GTNNAC	1 cut(s)	1297
Hpy188I	TCNGA	6 cut(s)	163, 1264, 1270, 1279, 1554, 1729
Hpy188III	TCNNGA	7 cut(s)	839, 1030, 1383, 1433, 1532, 1628, 1893
Hpy8I	GTNNAC	1 cut(s)	1297
HpyAV	CCTTC	8 cut(s)	40, 59, 121, 220, 308, 470, 834, 859
HpyCH4III	ACNGT	7 cut(s)	7, 214, 286, 340, 547, 902, 1406
HpyCH4IV	ACGT	4 cut(s)	1204, 1225, 1762, 1771
HpyCH4V	TGCA	9 cut(s)	936, 951, 1017, 1340, 1364, 1397, 1447, 1820, 1834
HpyF10VI	GCNNNNNNNGC	3 cut(s)	152, 200, 1370
HpySE526I	ACGT	4 cut(s)	1204, 1225, 1762, 1771
Hsp92II	CATG	8 cut(s)	23, 831, 925, 936, 1017, 1021, 1033, 1453
KroI	GCCGGC	1 cut(s)	668
KroNI	GCCGGC	1 cut(s)	670
KspAI	GTTAAC	1 cut(s)	1297
Kzo9I	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
Lsp1109I	GCAGC	4 cut(s)	133, 1107, 1376, 1832
LweI	GCATC	4 cut(s)	958, 1231, 1427, 1645
MaeI	CTAG	1 cut(s)	1505
MaeII	ACGT	4 cut(s)	1204, 1225, 1762, 1771
MaeIII	GTNAC	5 cut(s)	22, 791, 1221, 1460, 1532
MalI	GATC	5 cut(s)	1195, 1671, 1878, 1887, 1891
MboI	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
MflI	RGATCY	1 cut(s)	1876
MhlI	GDGCHC	1 cut(s)	916
MluCI	AATT	7 cut(s)	874, 1282, 1579, 1814, 1843, 1848, 1864
MluI	ACGCGT	1 cut(s)	1597
MlyI	GAGTC	2 cut(s)	1229, 1475
MmeI	TCCRAC	2 cut(s)	537, 1689
Mph1103I	ATGCAT	2 cut(s)	1019, 1836
MroNI	GCCGGC	1 cut(s)	668
MseI	TTAA	6 cut(s)	834, 1133, 1296, 1619, 1847, 1856
MslI	CAYNNNNRTG	2 cut(s)	1665, 1829
MspA1I	CMGCKG	1 cut(s)	1098
MspCI	CTTAAG	1 cut(s)	1855
MspI	CCGG	2 cut(s)	12, 669
MspR9I	CCNGG	1 cut(s)	1493
Mva1269I	GAATGC	1 cut(s)	520
MvaI	CCWGG	1 cut(s)	1493
MvnI	CGCG	1 cut(s)	1599
MwoI	GCNNNNNNNGC	3 cut(s)	152, 200, 1370
NaeI	GCCGGC	1 cut(s)	670
NdeII	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
NgoMIV	GCCGGC	1 cut(s)	668
NlaIII	CATG	8 cut(s)	23, 831, 925, 936, 1017, 1021, 1033, 1453
NlaIV	GGNNCC	1 cut(s)	887
NmeAIII	GCCGAG	2 cut(s)	304, 1519
NmuCI	GTSAC	5 cut(s)	22, 791, 1221, 1460, 1532
NsiI	ATGCAT	2 cut(s)	1019, 1836
NspI	RCATGY	3 cut(s)	925, 936, 1017
PagI	TCATGA	1 cut(s)	1029
PceI	AGGCCT	1 cut(s)	848
PciI	ACATGT	1 cut(s)	921
PcsI	WCGNNNNNNNCGW	1 cut(s)	1768
PctI	GAATGC	1 cut(s)	520
PdiI	GCCGGC	1 cut(s)	670
PfeI	GAWTC	5 cut(s)	182, 1180, 1265, 1352, 1631
PflMI	CCANNNNNTGG	1 cut(s)	1601
PkrI	GCNGC	6 cut(s)	148, 520, 613, 1097, 1366, 1822
PleI	GAGTC	2 cut(s)	1228, 1474
PmaCI	CACGTG	1 cut(s)	1226
PmlI	CACGTG	1 cut(s)	1226
PpsI	GAGTC	2 cut(s)	1228, 1474
Ppu21I	YACGTR	2 cut(s)	1226, 1772
PpuMI	RGGWCCY	1 cut(s)	1793
PscI	ACATGT	1 cut(s)	921
Psp5II	RGGWCCY	1 cut(s)	1793
Psp6I	CCWGG	1 cut(s)	1491
PspCI	CACGTG	1 cut(s)	1226
PspFI	CCCAGC	1 cut(s)	1098
PspGI	CCWGG	1 cut(s)	1491
PspN4I	GGNNCC	1 cut(s)	887
PspPI	GGNCC	2 cut(s)	1388, 1793
PspPPI	RGGWCCY	1 cut(s)	1793
PstI	CTGCAG	1 cut(s)	1399
PstNI	CAGNNNCTG	1 cut(s)	1376
PsuI	RGATCY	1 cut(s)	1876
PvuII	CAGCTG	1 cut(s)	1098
RsaI	GTAC	2 cut(s)	1106, 1408
RsaNI	GTAC	2 cut(s)	1105, 1407
RseI	CAYNNNNRTG	2 cut(s)	1665, 1829
SaqAI	TTAA	6 cut(s)	834, 1133, 1296, 1619, 1847, 1856
SatI	GCNGC	6 cut(s)	147, 519, 612, 1096, 1365, 1821
Sau3AI	GATC	5 cut(s)	1193, 1669, 1876, 1885, 1889
Sau96I	GGNCC	2 cut(s)	1388, 1793
SchI	GAGTC	2 cut(s)	1229, 1475
ScrFI	CCNGG	1 cut(s)	1493
SduI	GDGCHC	1 cut(s)	916
SfaNI	GCATC	4 cut(s)	958, 1231, 1427, 1645
SfcI	CTRYAG	2 cut(s)	1368, 1395
SinI	GGWCC	2 cut(s)	1388, 1793
SmiMI	CAYNNNNRTG	2 cut(s)	1665, 1829
SmlI	CTYRAG	1 cut(s)	1855
SmoI	CTYRAG	1 cut(s)	1855
Sse9I	AATT	7 cut(s)	874, 1282, 1579, 1814, 1843, 1848, 1864
SseBI	AGGCCT	1 cut(s)	848
SsiI	CCGC	8 cut(s)	365, 392, 419, 446, 518, 611, 796, 879
SspI	AATATT	1 cut(s)	1807
SspMI	CTAG	1 cut(s)	1505
StuI	AGGCCT	1 cut(s)	848
StyD4I	CCNGG	1 cut(s)	1491
StyI	CCWWGG	3 cut(s)	258, 861, 1184
TaaI	ACNGT	7 cut(s)	7, 214, 286, 340, 547, 902, 1406
TaiI	ACGT	4 cut(s)	1207, 1228, 1765, 1774
TaqI	TCGA	4 cut(s)	856, 868, 988, 1888
TaqII	GACCGA	1 cut(s)	320
TasI	AATT	7 cut(s)	874, 1282, 1579, 1814, 1843, 1848, 1864
TatI	WGTACW	1 cut(s)	1406
TauI	GCSGC	2 cut(s)	521, 614
TfiI	GAWTC	5 cut(s)	182, 1180, 1265, 1352, 1631
Tru1I	TTAA	6 cut(s)	834, 1133, 1296, 1619, 1847, 1856
Tru9I	TTAA	6 cut(s)	834, 1133, 1296, 1619, 1847, 1856
TscAI	CASTG	5 cut(s)	40, 228, 291, 679, 1669
TseFI	GTSAC	5 cut(s)	22, 791, 1221, 1460, 1532
TseI	GCWGC	4 cut(s)	146, 1095, 1364, 1820
Tsp45I	GTSAC	5 cut(s)	22, 791, 1221, 1460, 1532
TspDTI	ATGAA	8 cut(s)	68, 246, 748, 816, 1034, 1086, 1245, 1344
TspRI	CASTG	5 cut(s)	40, 228, 291, 679, 1669
Van91I	CCANNNNNTGG	1 cut(s)	1601
Vha464I	CTTAAG	1 cut(s)	1855
VpaK11BI	GGWCC	2 cut(s)	1388, 1793
XagI	CCTNNNNNAGG	2 cut(s)	1112, 1169
XapI	RAATTY	3 cut(s)	1282, 1579, 1814
XceI	RCATGY	3 cut(s)	925, 936, 1017
XspI	CTAG	1 cut(s)	1505
Zsp2I	ATGCAT	2 cut(s)	1019, 1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.