Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0004607

Physical Location & Seq

Genomic Coordinates Forward (+)

5231843 .. 5237623

Gene Structure 5781 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g04950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGAAGCGGACGAGGAAGATACTTCCAAGGTGAGCGAGCCTTCGATTTCACCCCAAGATGACGCTTTGCCGTTGCCTCACACAGGTGAGGAGCTCCGGAACACCGAGCCGCAATGCTACCCGGAGGCTGTACCTGAGCCCGAGCATGGGGGCTCGGGGCTCAGGTTCGACGGAGAATCTGATTTGGTACCGGCTTCAGTAGGGAGAGACGATGGGGATGGGATTGAAGGCGGGTGTAAGGAGGAGGTAACGGAAATGGAGGATGTGGTGGAGGCGATGGTGGTGGCTGATGAGACCATTAAAACTGACGCAGTGGAGGATTTGGGGGCGGCGATGGAGAAGTCTGCTGCTGACGCGGGAGAGAAGTTGGTGGTGGAAGAGGAGACGAATGTGGTAGAAGGTCACGTGACAGAGGAAACGGAGGTCAAGGAGGAGATGCATGTGGCTGGAGGTCATGTGACAGAGGAAACCGAGGTGGAGGAGGAAATGACTGTGGCCGGAGGTCACGTGAAAGAGGAAACTGAGGTTGTGGAGGTGATGAATGTAGCTGAAGGTCACGCCACAGAGGAAACTGAGGTTGGGCATGTGAATGAAAAGGCACTGGATACAGAGGAGAAGTTGTTGCCTGAGGAAGCTGCTGTGGTTAACTTGGACAAGCAGGAGGCCGAGGAGTCTAATGTGGCTGAAACGGCTGAGGAGACTGTGCTTTCAATGAAGGACAAAACAGAACAAATGACGGGTGAAGCCAAGGAAGAGGAGATTGAGGCCGAGACAGGGGGAAATGAGGCTGAGACCGAGGCGGTAGGAGGGGAGGACAGGGACGAGGCGGTGGGAGAGGAAGCTGAGGCCGAAGTGGAGCTAGAGGAGGCTGAGGCCGAAGCTGAGCAAGTGGAGGCTGAGGCCGAAGTGGAAGGAGATGAGGATGACGCAGGGGGAGATGATGAGGAGAATGCGGCAGACATGTTGGCTGAGACCGACATAGTGGGAGAGGTGGATATGGGTGATGATGTAATGGAGGAGATAACTGAGGCAGAGGCGACAGGGGCAGCAGAGGAAGAAGCAGAAGAAATGGAGGTGGAAGAGGAGGAGGAGATGAAAAGGGCCAGCAGTGGCGGGAAGAGGAAGCGTGTGAAGAGTTCTAAGGACACAGGAAAACTCCTTTCAAAGAAGAAAATGGAAGAGGATGTCTGTTTCATTTGCTTTGATGGGGGAGAGCTTGTGCTTTGTGACCGCAGGGGATGTCCCAAGGCATACCATCCTTCGTGTGTTAATCGTGATGAGGCCTTCTTTCGGGCTAAGGGTCGATGGAATTGTGGTTGGCACCTTTGTAGCAACTGTGAGAAGACTGCCCACTACATGTGTTATACATGTACCTTTTCCTTGTGCAAGGGCTGTATCAAAGATGCTGTTATCTTATGTGTTCGAGGAAACAAAGGCTTCTGTGAGACATGCATGAAAACTATCATGATGATTGAAAAGAATGAGCAAGGAAACAAGGACAAGGATGAAGTCAATTTTGATGATAAAAGCAGCTGGGAGTACCTCTTCAAGGATTATTGGATAGACTTAAAAGAGAAGTTATCTCTAACGCTTGATGACCTTGTTCAGGCCAAGAATCCATGGAAAGGTTCAACTGGACGTGCTAATAAACAGAAGTCACGTGATGAACCCTATGATGCTCATGATGGTGGAGGTTCTGATTCAGACAACTCTGAAAATTTGGATTTAGTTAACTCTAAAAATAGAAAGTCCAAAAAACGAATGAGAACCCGTGCAAAGGGGAGGGATTCATCAAGACCAGCTACAGCAACTGGCTCCGAAAGCCCATCTGCAGGTGACAGTGCAGGGTGGGCATCAAAGGAAATTTTGGAGTTGGTTATGCACATGAGAGATGGTGACGAGTCTGCATTATCTCAGTTTGATGTTCAGGCTCTCTTGCTAGAATATATAAAAAGGAACAAACTTCGTGACCCTCGCCGAAAAAGTCAGATAGTTTGTGATATAAGGCTTCAAAATATCCCACTTTCTTGTAAAAGAGGATGCTCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006355 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0010964 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031935 GO:0032259 GO:0032776 GO:0033043 GO:0033044 GO:0034641 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0044728 GO:0046483 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051252 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:1901360 GO:1902275 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GYF Plus-3 SWIB zf-CCCH

Protein Analysis

684

Amino Acids

75.15

Weight (kDa)

4.37

Isoelectric Point (pI)

55.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SWIB	PF02201	634 - 673	2.1e-07	SWIB/MDM2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004607)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16485 AT2G16485
fragaria_vesca	FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320 FvH4_2g10320
malus_domestica	MD00G1040500.v1.1 MD10G1064000.v1.1
prunus_persica	Prupe.8G085700_v2.0.a1
pyrus_communis	pycom05g04690 pycom05g04700 pycom10g04950 pycom10g04960
rosa_chinensis	RchiOBHm_Chr6g0267521
rosa_laevigata	RLG00000013994
rosa_multiflora	Rmu_co8013812.1_g000001 Rmu_co8150174.1_g000001 Rmu_sc0008030.1_g000001 Rmu_sc0012005.1_g000009
rosa_roxburghii	Rroxscaffold_7G00200660
rosa_rugosa	Rorug06G0033200 Rorug06G0033300 Rorug06G0033400
rosa_samantha	Rh6AG154800 Rh6BG155500 Rh6CG150700 Rh6DG140700
rosa_wichuraiana	Rw6G013290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1823
Acc36I	ACCTGC	1 cut(s)	1823
Acc65I	GGTACC	1 cut(s)	187
AccB1I	GGYRCC	2 cut(s)	187, 1320
AccII	CGCG	1 cut(s)	356
AccIII	TCCGGA	1 cut(s)	96
AcoI	YGGCCR	1 cut(s)	495
AcsI	RAATTY	2 cut(s)	1717, 1863
AcuI	CTGAAG	2 cut(s)	180, 570
AcvI	CACGTG	3 cut(s)	406, 508, 1661
AfaI	GTAC	4 cut(s)	132, 189, 1372, 1541
AflIII	ACRYGT	3 cut(s)	960, 1356, 1367
AgsI	TTSAA	7 cut(s)	227, 711, 1164, 1475, 1549, 1632, 2012
AjiI	CACGTC	1 cut(s)	1640
AjuI	GAANNNNNNNTTGG	2 cut(s)	561, 593
AleI	CACNNNNGTG	1 cut(s)	84
AluBI	AGCT	9 cut(s)	94, 548, 635, 842, 859, 881, 1216, 1533, 1802
AluI	AGCT	9 cut(s)	94, 548, 635, 842, 859, 881, 1216, 1533, 1802
Alw21I	GWGCWC	1 cut(s)	96
Alw26I	GTCTC	8 cut(s)	201, 287, 377, 692, 764, 785, 965, 1439
AlwNI	CAGNNNCTG	1 cut(s)	1811
Ama87I	CYCGRG	2 cut(s)	140, 154
Aor13HI	TCCGGA	1 cut(s)	96
AoxI	GGCC	9 cut(s)	495, 663, 765, 846, 873, 900, 1101, 1281, 1608
ApeKI	GCWGC	4 cut(s)	347, 635, 1046, 1530
ApoI	RAATTY	2 cut(s)	1717, 1863
Asp718I	GGTACC	1 cut(s)	187
AspS9I	GGNCC	1 cut(s)	1101
AsuC2I	CCSGG	1 cut(s)	122
AsuHPI	GGTGA	8 cut(s)	42, 43, 98, 547, 752, 1013, 1847, 1907
AvaI	CYCGRG	2 cut(s)	140, 154
AxyI	CCTNAGG	1 cut(s)	627
BanI	GGYRCC	2 cut(s)	187, 1320
BanII	GRGCYC	4 cut(s)	96, 141, 155, 162
BbrPI	CACGTG	3 cut(s)	406, 508, 1661
BbsI	GAAGAC	1 cut(s)	1349
Bbv12I	GWGCWC	1 cut(s)	96
BbvCI	CCTCAGC	4 cut(s)	693, 843, 870, 897
BbvI	GCAGC	4 cut(s)	334, 622, 1058, 1542
BceAI	ACGGC	2 cut(s)	55, 705
BciVI	GTATCC	1 cut(s)	598
BcnI	CCSGG	1 cut(s)	122
BcoDI	GTCTC	8 cut(s)	201, 287, 377, 692, 764, 785, 965, 1439
BfaI	CTAG	2 cut(s)	860, 1940
BfmI	CTRYAG	2 cut(s)	1803, 1830
BfuAI	ACCTGC	1 cut(s)	1823
BfuI	GTATCC	1 cut(s)	598
BisI	GCNGC	7 cut(s)	110, 330, 348, 636, 954, 1047, 1531
BlpI	GCTNAGC	1 cut(s)	882
BlsI	GCNGC	7 cut(s)	111, 331, 349, 637, 955, 1048, 1532
Bme1390I	CCNGG	1 cut(s)	122
BmeT110I	CYCGRG	2 cut(s)	140, 154
BmgBI	CACGTC	1 cut(s)	1640
BmgT120I	GGNCC	1 cut(s)	1101
BmiI	GGNNCC	3 cut(s)	189, 1322, 1816
BmrFI	CCNGG	1 cut(s)	122
BmsI	GCATC	5 cut(s)	426, 1393, 1666, 1862, 2030
BpiI	GAAGAC	1 cut(s)	1349
BpmI	CTGGAG	1 cut(s)	468
Bpu10I	CCTNAGC	7 cut(s)	135, 161, 693, 843, 870, 897, 1296
Bpu1102I	GCTNAGC	1 cut(s)	882
BpuMI	CCSGG	1 cut(s)	122
BsaAI	YACGTR	3 cut(s)	406, 508, 1661
BsaI	GGTCTC	3 cut(s)	287, 785, 965
BsaJI	CCNNGG	7 cut(s)	27, 471, 666, 747, 795, 1245, 1619
BsaWI	WCCGGW	1 cut(s)	96
BsaXI	ACNNNNNCTCC	8 cut(s)	441, 471, 492, 522, 605, 635, 1203, 1233
Bse118I	RCCGGY	1 cut(s)	190
Bse1I	ACTGG	3 cut(s)	606, 1639, 1816
Bse21I	CCTNAGG	1 cut(s)	627
Bse3DI	GCAATG	1 cut(s)	119
BseAI	TCCGGA	1 cut(s)	96
BseDI	CCNNGG	7 cut(s)	27, 471, 666, 747, 795, 1245, 1619
BseGI	GGATG	8 cut(s)	223, 268, 928, 1189, 1244, 1255, 1510, 2045
BseMI	GCAATG	1 cut(s)	119
BseNI	ACTGG	3 cut(s)	606, 1639, 1816
BseXI	GCAGC	4 cut(s)	334, 622, 1058, 1542
BseYI	CCCAGC	1 cut(s)	1533
BsgI	GTGCAG	1 cut(s)	1863
Bsh1236I	CGCG	1 cut(s)	356
BshFI	GGCC	9 cut(s)	497, 665, 767, 848, 875, 902, 1103, 1283, 1610
BshNI	GGYRCC	2 cut(s)	187, 1320
BsiHKAI	GWGCWC	1 cut(s)	96
BsiHKCI	CYCGRG	2 cut(s)	140, 154
BsiSI	CCGG	4 cut(s)	97, 122, 191, 498
BslFI	GGGAC	2 cut(s)	833, 1227
BsmAI	GTCTC	8 cut(s)	201, 287, 377, 692, 764, 785, 965, 1439
BsmBI	CGTCTC	2 cut(s)	201, 377
BsmFI	GGGAC	2 cut(s)	833, 1227
BsmI	GAATGC	1 cut(s)	955
BsnI	GGCC	9 cut(s)	497, 665, 767, 848, 875, 902, 1103, 1283, 1610
Bso31I	GGTCTC	3 cut(s)	287, 785, 965
BsoBI	CYCGRG	2 cut(s)	140, 154
Bsp1286I	GDGCHC	4 cut(s)	96, 141, 155, 162
Bsp13I	TCCGGA	1 cut(s)	96
Bsp1720I	GCTNAGC	1 cut(s)	882
Bsp19I	CCATGG	1 cut(s)	1619
BspANI	GGCC	9 cut(s)	497, 665, 767, 848, 875, 902, 1103, 1283, 1610
BspEI	TCCGGA	1 cut(s)	96
BspFNI	CGCG	1 cut(s)	356
BspHI	TCATGA	2 cut(s)	1464, 1681
BspLI	GGNNCC	3 cut(s)	189, 1322, 1816
BspMAI	CTGCAG	1 cut(s)	1834
BspMI	ACCTGC	1 cut(s)	1823
BspT107I	GGYRCC	2 cut(s)	187, 1320
BspTNI	GGTCTC	3 cut(s)	287, 785, 965
BsrDI	GCAATG	1 cut(s)	119
BsrFI	RCCGGY	1 cut(s)	190
BsrI	ACTGG	3 cut(s)	606, 1639, 1816
BssAI	RCCGGY	1 cut(s)	190
BssECI	CCNNGG	7 cut(s)	27, 471, 666, 747, 795, 1245, 1619
BssT1I	CCWWGG	4 cut(s)	27, 747, 1245, 1619
Bst4CI	ACNGT	4 cut(s)	493, 703, 1337, 1841
Bst6I	CTCTTC	7 cut(s)	372, 747, 1074, 1112, 1127, 1173, 1550
BstBAI	YACGTR	3 cut(s)	406, 508, 1661
BstC8I	GCNNGC	2 cut(s)	38, 1105
BstDSI	CCRYGG	1 cut(s)	1619
BstENI	CCTNNNNNAGG	3 cut(s)	81, 1547, 1604
BstF5I	GGATG	8 cut(s)	223, 268, 928, 1189, 1244, 1255, 1510, 2045
BstFNI	CGCG	1 cut(s)	356
BstMAI	GTCTC	8 cut(s)	201, 287, 377, 692, 764, 785, 965, 1439
BstMWI	GCNNNNNNNGC	5 cut(s)	353, 689, 1043, 1821, 1850
BstNSI	RCATGY	6 cut(s)	443, 587, 964, 1360, 1371, 1452
BstSCI	CCNGG	1 cut(s)	120
BstSFI	CTRYAG	2 cut(s)	1803, 1830
BstUI	CGCG	1 cut(s)	356
BstV1I	GCAGC	4 cut(s)	334, 622, 1058, 1542
BstV2I	GAAGAC	1 cut(s)	1349
Bsu36I	CCTNAGG	1 cut(s)	627
BsuI	GTATCC	1 cut(s)	598
BsuRI	GGCC	9 cut(s)	497, 665, 767, 848, 875, 902, 1103, 1283, 1610
BtgI	CCRYGG	1 cut(s)	1619
BtgZI	GCGATG	2 cut(s)	290, 347
BtrI	CACGTC	1 cut(s)	1640
BtsCI	GGATG	8 cut(s)	223, 268, 928, 1189, 1244, 1255, 1510, 2045
BtsI	GCAGTG	2 cut(s)	318, 1114
BtsIMutI	CAGTG	4 cut(s)	318, 599, 1114, 1846
BveI	ACCTGC	1 cut(s)	1823
Cac8I	GCNNGC	2 cut(s)	38, 1105
CaiI	CAGNNNCTG	1 cut(s)	1811
CciI	TCATGA	2 cut(s)	1464, 1681
Cfr10I	RCCGGY	1 cut(s)	190
Cfr13I	GGNCC	1 cut(s)	1101
CseI	GACGC	4 cut(s)	71, 317, 362, 935
Csp6I	GTAC	4 cut(s)	131, 188, 1371, 1540
CviQI	GTAC	4 cut(s)	131, 188, 1371, 1540
EaeI	YGGCCR	1 cut(s)	495
Eam1104I	CTCTTC	7 cut(s)	372, 747, 1074, 1112, 1127, 1173, 1550
EarI	CTCTTC	7 cut(s)	372, 747, 1074, 1112, 1127, 1173, 1550
Ecl136II	GAGCTC	1 cut(s)	94
Eco130I	CCWWGG	4 cut(s)	27, 747, 1245, 1619
Eco147I	AGGCCT	1 cut(s)	1283
Eco24I	GRGCYC	4 cut(s)	96, 141, 155, 162
Eco31I	GGTCTC	3 cut(s)	287, 785, 965
Eco53kI	GAGCTC	1 cut(s)	94
Eco57I	CTGAAG	2 cut(s)	180, 570
Eco72I	CACGTG	3 cut(s)	406, 508, 1661
Eco81I	CCTNAGG	1 cut(s)	627
Eco88I	CYCGRG	2 cut(s)	140, 154
EcoICRI	GAGCTC	1 cut(s)	94
EcoNI	CCTNNNNNAGG	3 cut(s)	81, 1547, 1604
EcoT14I	CCWWGG	4 cut(s)	27, 747, 1245, 1619
EcoT22I	ATGCAT	2 cut(s)	441, 1454
EcoT38I	GRGCYC	4 cut(s)	96, 141, 155, 162
ErhI	CCWWGG	4 cut(s)	27, 747, 1245, 1619
Esp3I	CGTCTC	2 cut(s)	201, 377
FaqI	GGGAC	2 cut(s)	833, 1227
FauI	CCCGC	3 cut(s)	224, 349, 1106
Fnu4HI	GCNGC	7 cut(s)	110, 330, 348, 636, 954, 1047, 1531
FokI	GGATG	7 cut(s)	230, 275, 935, 1196, 1242, 1251, 1517
FriOI	GRGCYC	4 cut(s)	96, 141, 155, 162
Fsp4HI	GCNGC	7 cut(s)	110, 330, 348, 636, 954, 1047, 1531
FspBI	CTAG	2 cut(s)	860, 1940
GluI	GCNGC	7 cut(s)	110, 330, 348, 636, 954, 1047, 1531
GsaI	CCCAGC	1 cut(s)	1537
GsuI	CTGGAG	1 cut(s)	468
HaeIII	GGCC	9 cut(s)	497, 665, 767, 848, 875, 902, 1103, 1283, 1610
HapII	CCGG	4 cut(s)	97, 122, 191, 498
HgaI	GACGC	4 cut(s)	71, 317, 362, 935
HincII	GTYRAC	2 cut(s)	646, 1732
HindII	GTYRAC	2 cut(s)	646, 1732
HinfI	GANTC	6 cut(s)	176, 671, 1615, 1700, 1787, 1901
HpaI	GTTAAC	2 cut(s)	646, 1732
HpaII	CCGG	4 cut(s)	97, 122, 191, 498
HphI	GGTGA	8 cut(s)	42, 43, 98, 547, 752, 1013, 1847, 1907
Hpy166II	GTNNAC	2 cut(s)	646, 1732
Hpy188I	TCNGA	6 cut(s)	181, 1699, 1705, 1714, 1819, 1989
Hpy188III	TCNNGA	6 cut(s)	97, 1274, 1465, 1682, 1794, 1967
Hpy8I	GTNNAC	2 cut(s)	646, 1732
Hpy99I	CGWCG	1 cut(s)	173
HpyAV	CCTTC	8 cut(s)	51, 221, 392, 545, 709, 905, 1269, 1294
HpyCH4III	ACNGT	4 cut(s)	493, 703, 1337, 1841
HpyCH4IV	ACGT	4 cut(s)	405, 507, 1639, 1660
HpyCH4V	TGCA	8 cut(s)	439, 1386, 1452, 1775, 1832, 1844, 1882, 1907
HpyF10VI	GCNNNNNNNGC	5 cut(s)	353, 689, 1043, 1821, 1850
HpySE526I	ACGT	4 cut(s)	405, 507, 1639, 1660
Kpn2I	TCCGGA	1 cut(s)	96
KpnI	GGTACC	1 cut(s)	191
KspAI	GTTAAC	2 cut(s)	646, 1732
LmnI	GCTCC	4 cut(s)	91, 99, 856, 1820
Lsp1109I	GCAGC	4 cut(s)	334, 622, 1058, 1542
LweI	GCATC	5 cut(s)	426, 1393, 1666, 1862, 2030
MaeI	CTAG	2 cut(s)	860, 1940
MaeII	ACGT	4 cut(s)	405, 507, 1639, 1660
MhlI	GDGCHC	4 cut(s)	96, 141, 155, 162
MluCI	AATT	4 cut(s)	1309, 1513, 1717, 1863
MlyI	GAGTC	2 cut(s)	680, 1910
Mph1103I	ATGCAT	2 cut(s)	441, 1454
MroI	TCCGGA	1 cut(s)	96
MseI	TTAA	5 cut(s)	300, 645, 1269, 1568, 1731
MslI	CAYNNNNRTG	3 cut(s)	84, 588, 1686
MspA1I	CMGCKG	1 cut(s)	1533
MspI	CCGG	4 cut(s)	97, 122, 191, 498
MspR9I	CCNGG	1 cut(s)	122
Mva1269I	GAATGC	1 cut(s)	955
MvnI	CGCG	1 cut(s)	356
MwoI	GCNNNNNNNGC	5 cut(s)	353, 689, 1043, 1821, 1850
NciI	CCSGG	1 cut(s)	122
NcoI	CCATGG	1 cut(s)	1619
NlaIV	GGNNCC	3 cut(s)	189, 1322, 1816
NmeAIII	GCCGAG	2 cut(s)	691, 793
NsiI	ATGCAT	2 cut(s)	441, 1454
NspI	RCATGY	6 cut(s)	443, 587, 964, 1360, 1371, 1452
OliI	CACNNNNGTG	1 cut(s)	84
PagI	TCATGA	2 cut(s)	1464, 1681
PaqCI	CACCTGC	1 cut(s)	1823
PceI	AGGCCT	1 cut(s)	1283
PciI	ACATGT	3 cut(s)	960, 1356, 1367
PctI	GAATGC	1 cut(s)	955
PfeI	GAWTC	4 cut(s)	176, 1615, 1700, 1787
PkrI	GCNGC	7 cut(s)	111, 331, 349, 637, 955, 1048, 1532
PleI	GAGTC	2 cut(s)	679, 1909
PmaCI	CACGTG	3 cut(s)	406, 508, 1661
PmlI	CACGTG	3 cut(s)	406, 508, 1661
PpsI	GAGTC	2 cut(s)	679, 1909
Ppu21I	YACGTR	3 cut(s)	406, 508, 1661
PscI	ACATGT	3 cut(s)	960, 1356, 1367
Psp124BI	GAGCTC	1 cut(s)	96
PspCI	CACGTG	3 cut(s)	406, 508, 1661
PspFI	CCCAGC	1 cut(s)	1533
PspN4I	GGNNCC	3 cut(s)	189, 1322, 1816
PspPI	GGNCC	1 cut(s)	1101
PstI	CTGCAG	1 cut(s)	1834
PstNI	CAGNNNCTG	1 cut(s)	1811
PvuII	CAGCTG	1 cut(s)	1533
RsaI	GTAC	4 cut(s)	132, 189, 1372, 1541
RsaNI	GTAC	4 cut(s)	131, 188, 1371, 1540
RseI	CAYNNNNRTG	3 cut(s)	84, 588, 1686
SacI	GAGCTC	1 cut(s)	96
SaqAI	TTAA	5 cut(s)	300, 645, 1269, 1568, 1731
SatI	GCNGC	7 cut(s)	110, 330, 348, 636, 954, 1047, 1531
Sau96I	GGNCC	1 cut(s)	1101
SchI	GAGTC	2 cut(s)	680, 1910
ScrFI	CCNGG	1 cut(s)	122
SduI	GDGCHC	4 cut(s)	96, 141, 155, 162
SfaNI	GCATC	5 cut(s)	426, 1393, 1666, 1862, 2030
SfcI	CTRYAG	2 cut(s)	1803, 1830
SmiMI	CAYNNNNRTG	3 cut(s)	84, 588, 1686
Sse9I	AATT	4 cut(s)	1309, 1513, 1717, 1863
SseBI	AGGCCT	1 cut(s)	1283
SspMI	CTAG	2 cut(s)	860, 1940
SstI	GAGCTC	1 cut(s)	96
StuI	AGGCCT	1 cut(s)	1283
StyD4I	CCNGG	1 cut(s)	120
StyI	CCWWGG	4 cut(s)	27, 747, 1245, 1619
TaaI	ACNGT	4 cut(s)	493, 703, 1337, 1841
TaiI	ACGT	4 cut(s)	408, 510, 1642, 1663
TaqI	TCGA	4 cut(s)	44, 168, 1303, 1423
TaqII	GACCGA	2 cut(s)	809, 989
TasI	AATT	4 cut(s)	1309, 1513, 1717, 1863
TauI	GCSGC	3 cut(s)	112, 332, 956
TfiI	GAWTC	4 cut(s)	176, 1615, 1700, 1787
Tru1I	TTAA	5 cut(s)	300, 645, 1269, 1568, 1731
Tru9I	TTAA	5 cut(s)	300, 645, 1269, 1568, 1731
TscAI	CASTG	4 cut(s)	318, 606, 1114, 1846
TseI	GCWGC	4 cut(s)	347, 635, 1046, 1530
TspDTI	ATGAA	9 cut(s)	554, 606, 728, 1109, 1183, 1469, 1521, 1680, 1779
TspGWI	ACGGA	3 cut(s)	186, 266, 434
TspRI	CASTG	4 cut(s)	318, 606, 1114, 1846
XagI	CCTNNNNNAGG	3 cut(s)	81, 1547, 1604
XapI	RAATTY	2 cut(s)	1717, 1863
XceI	RCATGY	6 cut(s)	443, 587, 964, 1360, 1371, 1452
XspI	CTAG	2 cut(s)	860, 1940
Zsp2I	ATGCAT	2 cut(s)	441, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.