Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001904

Physical Location & Seq

Genomic Coordinates Reverse (-)

15725808 .. 15733536

Gene Structure 7729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G137800.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3150 bp

ATGGCTGATGCTGCACAACTGGATATTCCTCCAGAATGTGTGAGCAGTCAAACTGCAAAATGCCAAGAGGAAAGTACGTCAGGACAGATACATGAAATTGGTTCTGAAAGTCAATGTAGTGAAAAAACCAAAGAAAACATTGGCTGCAAAGTTGTTCAAAATGAGCTACTGGAAATCTGCAAAGCATCTAACAATCCTGACGAGCAGTCACAGTCATTCTCTGAAAATCTGACTGAGAATTCTCATGTTGAAAATTTGGGACTGCCTGCTGAAGATGTGGACAAGAGTAGTCAAAACGGTGCTCAAAATGTAACCAAGAATTCTCTTACCGAACAATTGGAAATGCCTCGTGAAGATCCGGATGTGAATAATCAGAGTGATAAAACTTCATGCTCTGGACAAATGTCATTGGAACAGACAAATGATTCTGGTTTTGGAACTTCATCTAGTGAACCGGCTGAAGAAAGGCATCCTTCCGGCTCATTTTGTGTACAAAATGAACTGTTACAAACCATTATGCCACTACCCATCTGCGGTGGCAGTGAACAAGTGCAGCCGATTAGTGAAAATGTGAACATGGCTTCTCTCAATGACCAAGCAGGACTGCCTCCTGAAGATGTGAGCAAGACTTGTCAGACCCAAAAAATTTCATGCCCTCACCAAATTACATCACATCAGATAAATGAATTTGGTTCTGGAAGTGTACCTAGCGAACCAGCAAAACAGAAAGATCAGCTTGACTCTGTACCTGCCCAAAATGATGAAGCTAAAACTAGCAAAGCAGTATCCAGCTCTACTGTTTTTGAACAACCGGGGCCCTCTATTGAAGCTATGACCGAGGATTCTCCTATTGGACATTCAGAACCACCCCTTGAAGATCTTAGCAAGAGTCTTAGTGATAAAGAAATGGAACCACTTCCAGAAGATGTGACCCAAAATTCTAGTCTTCAACAGTTGGAAACAGCATCGAAGAATGCATTGAAGATTTCTAGCTGCTTAGGACCTAAGGATAAGAAAAATCCAAAATCAAGAAAGAGGAAGTATATGTCTAGATCTTTTGTTCGCAGTGACCGAGTTCTGCGCTCAAAGACAGGGGAGAAAGAGAAACCTAAAGATCTTAAATTAAGTAATAATGTTGCAACTCTTGAATCCAGTAATAGTATTGCCAATGTAAGTAACGGAGAAGAGAAAAAAAGGAAGAAGAGAAAGAACAGACGAGACAATAGAGCCATAGCTGATGAATTTTCAAGAATCAGGACGCATCTGAGATATTTGCTGAACCGGATAGGCTATGAGAAATCTCTGATTGATGCTTATTCTGGTGAAGGTTGGAAAGGATCCAGTCTGGAAAAACTAAAGCCAGAAAAGGAGCTTCAACGAGCTACTTCTGAAATACTTAGACGCAAGTTGAAGATAAGAGATCTATTTCAACGTCTTGAGTCACTATGTGCCGAAGGAATGTTTCCAGAATCTTTATTTGATTCCGAAGGACAGATTGACAGTGAGGATATATTCTGTGGAAAATGTGGGTCCAAGGATGTGTCTCTTGATAATGATATTATCCTCTGTGATGGTGCTTGTGACCGTGGGTTCCACCAGTTCTGTCTAGAGCCACCACTTTTGAGTGAAGACATCCCCCCTGATGATGAGGGTTGGCTATGCCCTGGATGTGACTGCAAAGTTGATTGCATTGATTTACTTAATGACTCTCAAGGAACAGATCTTTCTGTCACTGACAGCTGGGAGAAGGTATTTCCTGAAGCAGCTGCAGCAGCATCAGCAGGAGAAAATCAGGACAACCATGGACTTCCATCAGATGATTCTGATGATAATGATTATGACCCTGATGGTCCAGAAACGGATAATAAAGTCCAGGGAGAAGAATCAAGTTCTGATGAATCTGAATATGCATCTGCATCTGATGGACTTGAGACTCCAAAAAGTAATGACGAGCAGTACTTGGGGCTTCCTTCTGAGGATTCAGAGGATGATGACTATAATCCTTATGCTCCAGATGTCAATGAGGATGTTAAGCAGGAAAGTTCAAGTTCTGATTTTACATCGGACTCTGAGGATCTTGGAGCTGCTCTTGATGATAATATTATGTCTTCCGAAGATGTTGAAGGTCCCAAATCAACGTCATTGGATGATAGTAAGCCTCATAGAGGCTCTGGCGAACAAAGTTCCATAAGCGGGCAAAAGAAACATTCTTTAAAAGATGAGTTGATATCTTTATTAGAGTCAGGTCCTGGCCAAGGTGAATCTGCACCTCTTTCTGGGAAAAGGCACATAGAAAGGTTGGACTACAAAAGGCTGCATGATGAGGCATATGGAAATGTTCCTACTGATTCAAGTGATGATGAAGATTGGAATGATATTGCCACACAAAGGAAAAGGAAGAAAGGTACTGGACAAGTTGCTAATAGGTCACCAAATGGAAAAACGTCAAACATTAAGAATGGAGTAATCACCAAAGATATAAAACCTGATGTAGACGAGAATGAGAATACTCCTAGGAGAATGCCTCATCGAAAGTCAAATGTTGAAGATACAAGCAATTTGTCGAATAAATCACCTAAAGGCTCTACTAAGTCTGGTTCTACTAGTGGGAGAGCTGGATCATCAAGATCAACATATAGCAGACTCGGGGAAGCTGCAACTCAGAGACTCTGCAAATCCTTCAAGGAGAACCATTATCCAGACCGATCTATGAAGGAAAGTCTGGCCCGGGAACTAGGACTAATGGCTAAGCAGGTAAGCAAATGGTTTGAAAATGCTCGCCACTGTTTAAAAGTGGGTGTGGATAAAAGTGCTTCAGAAAACTGTGCCCCGCCCCCTCAAACAAATAGAAGACAACTTGAACAAGGAGATGCAATTGTTGGAGATTCTGATCACAATGGAGCTCAAAACAAGGAATTACACGGGACAGATGATCCCATGATAGGTTGCTGCAGTAGGGATGTCATGGATAGTGAATTGGCGACTCTGGGAAGCAGCAGATCGAAGCTTAGTACTCCAAACAATAGAAAGAGAAAACGTAGATCAGATGATCCTGATCCAAAAACTGAGACACCAACACCTCCTGCTGAACCAGAAACTAATAGAAAACCTAGCAGAGTTATGACTAGACGAAGGAAATCTGTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox PHD

Protein Analysis

1050

Amino Acids

115.08

Weight (kDa)

4.87

Isoelectric Point (pI)

58.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001904)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19510 AT3G19510 AT3G19530
fragaria_vesca	FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760
malus_domestica	MD05G1092200.v1.1 MD10G1100500.v1.1
prunus_persica	Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1
pyrus_communis	pycom05g09180 pycom10g08610
rosa_chinensis	RchiOBHm_Chr6g0254411
rosa_laevigata	RLG00000014914
rosa_multiflora	Rmu_co8217068.1_g000001 Rmu_co8296759.1_g000001 Rmu_co8300769.1_g000001 Rmu_sc0009578.1_g000001 Rmu_ssc0000121.1_g000001 Rmu_ssc0000481.1_g000002
rosa_roxburghii	Rroxscaffold_7G00210820
rosa_rugosa	Rorug05G0552100
rosa_samantha	Rh6AG069200 Rh6BG061900 Rh6CG062000 Rh6DG059000
rosa_wichuraiana	Rw6G006080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	757, 2743
AccI	GTMKAC	1 cut(s)	2493
AccIII	TCCGGA	1 cut(s)	358
AciI	CCGC	3 cut(s)	534, 2193, 2831
AclWI	GGATC	8 cut(s)	350, 1332, 1345, 2082, 2626, 2927, 3044, 3050
AcoI	YGGCCR	1 cut(s)	2251
AcsI	RAATTY	7 cut(s)	238, 253, 319, 645, 686, 937, 1241
AcuI	CTGAAG	5 cut(s)	291, 480, 633, 1779, 2799
AdeI	CACNNNGTG	1 cut(s)	1448
AfaI	GTAC	7 cut(s)	76, 492, 705, 747, 1958, 2407, 3013
AfiI	CCNNNNNNNGG	7 cut(s)	533, 2165, 2193, 2255, 2276, 2388, 2942
AhdI	GACNNNNNGTC	1 cut(s)	205
AhlI	ACTAGT	1 cut(s)	2603
AjnI	CCWGG	3 cut(s)	1663, 1872, 2248
Alw21I	GWGCWC	2 cut(s)	304, 2905
Alw26I	GTCTC	5 cut(s)	1212, 1548, 1925, 2659, 3062
AlwI	GGATC	8 cut(s)	350, 1332, 1345, 2082, 2626, 2927, 3044, 3050
AlwNI	CAGNNNCTG	1 cut(s)	2249
Ama87I	CYCGRG	2 cut(s)	2645, 2727
Aor13HI	TCCGGA	1 cut(s)	358
AoxI	GGCC	3 cut(s)	815, 2251, 2724
ApaI	GGGCCC	1 cut(s)	819
ApoI	RAATTY	7 cut(s)	238, 253, 319, 645, 686, 937, 1241
ArsI	GACNNNNNNTTYG	2 cut(s)	928, 960
Asp700I	GAANNNNTTC	1 cut(s)	915
AspA2I	CCTAGG	1 cut(s)	2513
AspLEI	GCGC	1 cut(s)	1083
AspS9I	GGNCC	8 cut(s)	815, 816, 1001, 1530, 1850, 2126, 2246, 2725
AsuC2I	CCSGG	3 cut(s)	813, 2728, 2729
AsuHPI	GGTGA	6 cut(s)	650, 1334, 2270, 2421, 2461, 2565
AvaI	CYCGRG	2 cut(s)	2645, 2727
AvaII	GGWCC	5 cut(s)	1001, 1530, 1850, 2126, 2246
AvrII	CCTAGG	1 cut(s)	2513
AxyI	CCTNAGG	1 cut(s)	1005
BaeGI	GKGCMC	2 cut(s)	819, 2830
BalI	TGGCCA	1 cut(s)	2253
BamHI	GGATCC	1 cut(s)	1337
BanII	GRGCYC	2 cut(s)	819, 2905
BauI	CACGAG	1 cut(s)	348
BbsI	GAAGAC	4 cut(s)	938, 1635, 2100, 2857
Bbv12I	GWGCWC	2 cut(s)	304, 2905
BccI	CCATC	5 cut(s)	536, 1565, 1819, 1841, 1916
BciT130I	CCWGG	3 cut(s)	1665, 1874, 2250
BciVI	GTATCC	1 cut(s)	796
BclI	TGATCA	1 cut(s)	2890
BcnI	CCSGG	3 cut(s)	813, 2728, 2729
BcoDI	GTCTC	5 cut(s)	1212, 1548, 1925, 2659, 3062
BcuI	ACTAGT	1 cut(s)	2603
BfmI	CTRYAG	2 cut(s)	1767, 2950
BfuAI	ACCTGC	2 cut(s)	757, 2743
BfuI	GTATCC	1 cut(s)	796
BglII	AGATCT	5 cut(s)	877, 1052, 1114, 1420, 1720
BlnI	CCTAGG	1 cut(s)	2513
BlpI	GCTNAGC	1 cut(s)	2748
BmcAI	AGTACT	2 cut(s)	1958, 3013
Bme1390I	CCNGG	6 cut(s)	813, 1665, 1874, 2250, 2728, 2729
Bme18I	GGWCC	5 cut(s)	1001, 1530, 1850, 2126, 2246
BmeRI	GACNNNNNGTC	1 cut(s)	205
BmeT110I	CYCGRG	2 cut(s)	2645, 2727
BmgT120I	GGNCC	8 cut(s)	815, 816, 1001, 1530, 1850, 2126, 2246, 2725
BmiI	GGNNCC	7 cut(s)	816, 817, 912, 1339, 1531, 1592, 2128
BmrFI	CCNGG	6 cut(s)	813, 1665, 1874, 2250, 2728, 2729
BmsI	GCATC	9 cut(s)	194, 478, 974, 1270, 1300, 1784, 1919, 1925, 2860
BoxI	GACNNNNGTC	1 cut(s)	403
BpiI	GAAGAC	4 cut(s)	938, 1635, 2100, 2857
BplI	GAGNNNNNCTC	2 cut(s)	2509, 2541
BpmI	CTGGAG	2 cut(s)	15, 1995
Bpu10I	CCTNAGC	1 cut(s)	997
Bpu1102I	GCTNAGC	1 cut(s)	2748
BpuEI	CTTGAG	3 cut(s)	1457, 1695, 1949
BpuMI	CCSGG	3 cut(s)	813, 2728, 2729
BsaBI	GATNNNNATC	2 cut(s)	2889, 3054
BsaWI	WCCGGW	2 cut(s)	358, 1281
Bsc4I	CCNNNNNNNGG	7 cut(s)	533, 2165, 2193, 2255, 2276, 2388, 2942
Bse118I	RCCGGY	1 cut(s)	454
Bse1I	ACTGG	6 cut(s)	24, 174, 1152, 1341, 1597, 2413
Bse21I	CCTNAGG	1 cut(s)	1005
Bse8I	GATNNNNATC	2 cut(s)	2889, 3054
BseAI	TCCGGA	1 cut(s)	358
BseBI	CCWGG	3 cut(s)	1665, 1874, 2250
BseGI	GGATG	9 cut(s)	367, 469, 1543, 1632, 1673, 1993, 2032, 2152, 2965
BseJI	GATNNNNATC	2 cut(s)	2889, 3054
BseLI	CCNNNNNNNGG	7 cut(s)	533, 2165, 2193, 2255, 2276, 2388, 2942
BseMII	CTCAG	6 cut(s)	225, 1256, 1965, 2061, 2675, 3057
BseNI	ACTGG	6 cut(s)	24, 174, 1152, 1341, 1597, 2413
BseSI	GKGCMC	2 cut(s)	819, 2830
BseYI	CCCAGC	1 cut(s)	1740
BsgI	GTGCAG	2 cut(s)	572, 2250
BshFI	GGCC	3 cut(s)	817, 2253, 2726
BsiHKAI	GWGCWC	2 cut(s)	304, 2905
BsiHKCI	CYCGRG	2 cut(s)	2645, 2727
BsiSI	CCGG	6 cut(s)	359, 455, 477, 812, 1282, 2728
BslFI	GGGAC	3 cut(s)	273, 2112, 2938
BslI	CCNNNNNNNGG	7 cut(s)	533, 2165, 2193, 2255, 2276, 2388, 2942
BsmAI	GTCTC	5 cut(s)	1212, 1548, 1925, 2659, 3062
BsmFI	GGGAC	3 cut(s)	273, 2112, 2938
BsmI	GAATGC	2 cut(s)	979, 2526
BsnI	GGCC	3 cut(s)	817, 2253, 2726
BsoBI	CYCGRG	2 cut(s)	2645, 2727
Bsp120I	GGGCCC	1 cut(s)	815
Bsp1286I	GDGCHC	4 cut(s)	304, 819, 2830, 2905
Bsp13I	TCCGGA	1 cut(s)	358
Bsp1407I	TGTACA	1 cut(s)	490
Bsp1720I	GCTNAGC	1 cut(s)	2748
Bsp19I	CCATGG	1 cut(s)	1801
BspACI	CCGC	3 cut(s)	534, 2193, 2831
BspANI	GGCC	3 cut(s)	817, 2253, 2726
BspCNI	CTCAG	6 cut(s)	226, 1257, 1966, 2062, 2674, 3058
BspEI	TCCGGA	1 cut(s)	358
BspLI	GGNNCC	7 cut(s)	816, 817, 912, 1339, 1531, 1592, 2128
BspMAI	CTGCAG	2 cut(s)	1771, 2954
BspMI	ACCTGC	2 cut(s)	757, 2743
BspPI	GGATC	8 cut(s)	350, 1332, 1345, 2082, 2626, 2927, 3044, 3050
BsrFI	RCCGGY	1 cut(s)	454
BsrGI	TGTACA	1 cut(s)	490
BsrI	ACTGG	6 cut(s)	24, 174, 1152, 1341, 1597, 2413
BssAI	RCCGGY	1 cut(s)	454
BssSI	CACGAG	1 cut(s)	348
BssT1I	CCWWGG	4 cut(s)	1533, 1801, 2254, 2513
Bst2BI	CACGAG	1 cut(s)	348
Bst2UI	CCWGG	3 cut(s)	1665, 1874, 2250
Bst4CI	ACNGT	9 cut(s)	213, 299, 504, 799, 954, 1502, 1586, 2786, 2825
Bst6I	CTCTTC	2 cut(s)	1179, 1196
BstAUI	TGTACA	1 cut(s)	490
BstC8I	GCNNGC	3 cut(s)	267, 2195, 2779
BstDSI	CCRYGG	2 cut(s)	1585, 1801
BstEII	GGTNACC	1 cut(s)	2427
BstENI	CCTNNNNNAGG	2 cut(s)	2163, 2253
BstF5I	GGATG	9 cut(s)	367, 469, 1543, 1632, 1673, 1993, 2032, 2152, 2965
BstHHI	GCGC	1 cut(s)	1083
BstMAI	GTCTC	5 cut(s)	1212, 1548, 1925, 2659, 3062
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 1769, 1772, 1778
BstNI	CCWGG	3 cut(s)	1665, 1874, 2250
BstPAI	GACNNNNGTC	1 cut(s)	403
BstPI	GGTNACC	1 cut(s)	2427
BstSCI	CCNGG	6 cut(s)	811, 1663, 1872, 2248, 2726, 2727
BstSFI	CTRYAG	2 cut(s)	1767, 2950
BstSLI	GKGCMC	2 cut(s)	819, 2830
BstV2I	GAAGAC	4 cut(s)	938, 1635, 2100, 2857
BstX2I	RGATCY	8 cut(s)	355, 877, 1052, 1114, 1337, 1420, 1720, 2074
BstYI	RGATCY	8 cut(s)	355, 877, 1052, 1114, 1337, 1420, 1720, 2074
Bsu36I	CCTNAGG	1 cut(s)	1005
BsuI	GTATCC	1 cut(s)	796
BsuRI	GGCC	3 cut(s)	817, 2253, 2726
BtgI	CCRYGG	2 cut(s)	1585, 1801
BtsCI	GGATG	9 cut(s)	367, 469, 1543, 1632, 1673, 1993, 2032, 2152, 2965
BtsI	GCAGTG	2 cut(s)	547, 1072
BtsIMutI	CAGTG	5 cut(s)	547, 1072, 1507, 1731, 2782
BveI	ACCTGC	2 cut(s)	757, 2743
Cac8I	GCNNGC	3 cut(s)	267, 2195, 2779
CaiI	CAGNNNCTG	1 cut(s)	2249
CfoI	GCGC	1 cut(s)	1083
Cfr10I	RCCGGY	1 cut(s)	454
Cfr13I	GGNCC	8 cut(s)	815, 816, 1001, 1530, 1850, 2126, 2246, 2725
Cfr9I	CCCGGG	1 cut(s)	2727
CseI	GACGC	2 cut(s)	1267, 1410
Csp6I	GTAC	7 cut(s)	75, 491, 704, 746, 1957, 2406, 3012
CspCI	CAANNNNNGTGG	2 cut(s)	1602, 1637
CviAII	CATG	9 cut(s)	92, 245, 390, 577, 651, 1802, 2318, 2938, 2965
CviQI	GTAC	7 cut(s)	75, 491, 704, 746, 1957, 2406, 3012
DraI	TTTAAA	2 cut(s)	2214, 2790
DraIII	CACNNNGTG	1 cut(s)	1448
DriI	GACNNNNNGTC	1 cut(s)	205
EaeI	YGGCCR	1 cut(s)	2251
Eam1104I	CTCTTC	2 cut(s)	1179, 1196
Eam1105I	GACNNNNNGTC	1 cut(s)	205
EarI	CTCTTC	2 cut(s)	1179, 1196
Ecl136II	GAGCTC	1 cut(s)	2903
Eco130I	CCWWGG	4 cut(s)	1533, 1801, 2254, 2513
Eco24I	GRGCYC	2 cut(s)	819, 2905
Eco32I	GATATC	1 cut(s)	2229
Eco47I	GGWCC	5 cut(s)	1001, 1530, 1850, 2126, 2246
Eco53kI	GAGCTC	1 cut(s)	2903
Eco57I	CTGAAG	5 cut(s)	291, 480, 633, 1779, 2799
Eco81I	CCTNAGG	1 cut(s)	1005
Eco88I	CYCGRG	2 cut(s)	2645, 2727
Eco91I	GGTNACC	1 cut(s)	2427
EcoICRI	GAGCTC	1 cut(s)	2903
EcoNI	CCTNNNNNAGG	2 cut(s)	2163, 2253
EcoO109I	RGGNCCY	5 cut(s)	815, 816, 1001, 2126, 2246
EcoO65I	GGTNACC	1 cut(s)	2427
EcoRI	GAATTC	2 cut(s)	238, 319
EcoRII	CCWGG	3 cut(s)	1663, 1872, 2248
EcoRV	GATATC	1 cut(s)	2229
EcoT14I	CCWWGG	4 cut(s)	1533, 1801, 2254, 2513
EcoT22I	ATGCAT	2 cut(s)	979, 1912
EcoT38I	GRGCYC	2 cut(s)	819, 2905
ErhI	CCWWGG	4 cut(s)	1533, 1801, 2254, 2513
FaeI	CATG	9 cut(s)	95, 248, 393, 580, 654, 1805, 2321, 2941, 2968
FalI	AAGNNNNNCTT	4 cut(s)	457, 489, 720, 752
FaqI	GGGAC	3 cut(s)	273, 2112, 2938
FatI	CATG	9 cut(s)	91, 244, 389, 576, 650, 1801, 2317, 2937, 2964
FauI	CCCGC	2 cut(s)	2186, 2838
FauNDI	CATATG	1 cut(s)	2329
FbaI	TGATCA	1 cut(s)	2890
FblI	GTMKAC	1 cut(s)	2493
FokI	GGATG	9 cut(s)	374, 456, 1550, 1619, 1680, 2000, 2039, 2159, 2972
FriOI	GRGCYC	2 cut(s)	819, 2905
GlaI	GCGC	1 cut(s)	1082
GsaI	CCCAGC	1 cut(s)	1744
GsuI	CTGGAG	2 cut(s)	15, 1995
HaeIII	GGCC	3 cut(s)	817, 2253, 2726
HapII	CCGG	6 cut(s)	359, 455, 477, 812, 1282, 2728
HgaI	GACGC	2 cut(s)	1267, 1410
HhaI	GCGC	1 cut(s)	1083
Hin1II	CATG	9 cut(s)	95, 248, 393, 580, 654, 1805, 2321, 2941, 2968
Hin6I	GCGC	1 cut(s)	1081
HinP1I	GCGC	1 cut(s)	1081
HindIII	AAGCTT	1 cut(s)	3005
HpaII	CCGG	6 cut(s)	359, 455, 477, 812, 1282, 2728
HphI	GGTGA	6 cut(s)	650, 1334, 2270, 2421, 2461, 2565
Hpy166II	GTNNAC	7 cut(s)	280, 452, 491, 545, 574, 704, 2494
Hpy8I	GTNNAC	7 cut(s)	280, 452, 491, 545, 574, 704, 2494
HpyCH4III	ACNGT	9 cut(s)	213, 299, 504, 799, 954, 1502, 1586, 2786, 2825
HpyCH4IV	ACGT	5 cut(s)	77, 1432, 2138, 2444, 3037
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 1769, 1772, 1778
HpySE526I	ACGT	5 cut(s)	77, 1432, 2138, 2444, 3037
Hsp92II	CATG	9 cut(s)	95, 248, 393, 580, 654, 1805, 2321, 2941, 2968
HspAI	GCGC	1 cut(s)	1081
Kpn2I	TCCGGA	1 cut(s)	358
Ksp22I	TGATCA	1 cut(s)	2890
LmnI	GCTCC	4 cut(s)	1369, 2014, 2081, 2900
LweI	GCATC	9 cut(s)	194, 478, 974, 1270, 1300, 1784, 1919, 1925, 2860
MaeII	ACGT	5 cut(s)	77, 1432, 2138, 2444, 3037
MfeI	CAATTG	2 cut(s)	335, 2874
MflI	RGATCY	8 cut(s)	355, 877, 1052, 1114, 1337, 1420, 1720, 2074
MhlI	GDGCHC	4 cut(s)	304, 819, 2830, 2905
MlsI	TGGCCA	1 cut(s)	2253
MluNI	TGGCCA	1 cut(s)	2253
MmeI	TCCRAC	4 cut(s)	936, 1310, 2280, 2860
Mox20I	TGGCCA	1 cut(s)	2253
Mph1103I	ATGCAT	2 cut(s)	979, 1912
MroI	TCCGGA	1 cut(s)	358
MroXI	GAANNNNTTC	1 cut(s)	915
MscI	TGGCCA	1 cut(s)	2253
MseI	TTAA	7 cut(s)	1119, 1124, 1701, 2031, 2213, 2454, 2789
Msp20I	TGGCCA	1 cut(s)	2253
MspA1I	CMGCKG	2 cut(s)	1740, 1766
MspI	CCGG	6 cut(s)	359, 455, 477, 812, 1282, 2728
MspR9I	CCNGG	6 cut(s)	813, 1665, 1874, 2250, 2728, 2729
MunI	CAATTG	2 cut(s)	335, 2874
Mva1269I	GAATGC	2 cut(s)	979, 2526
MvaI	CCWGG	3 cut(s)	1665, 1874, 2250
MwoI	GCNNNNNNNGC	4 cut(s)	11, 1769, 1772, 1778
NciI	CCSGG	3 cut(s)	813, 2728, 2729
NcoI	CCATGG	1 cut(s)	1801
NdeI	CATATG	1 cut(s)	2329
NlaIII	CATG	9 cut(s)	95, 248, 393, 580, 654, 1805, 2321, 2941, 2968
NlaIV	GGNNCC	7 cut(s)	816, 817, 912, 1339, 1531, 1592, 2128
NmuCI	GTSAC	8 cut(s)	207, 928, 1067, 1440, 1580, 1670, 1729, 2427
NsiI	ATGCAT	2 cut(s)	979, 1912
PcsI	WCGNNNNNNNCGW	1 cut(s)	1069
PctI	GAATGC	2 cut(s)	979, 2526
PdmI	GAANNNNTTC	1 cut(s)	915
PpuMI	RGGWCCY	3 cut(s)	1001, 2126, 2246
PshAI	GACNNNNGTC	1 cut(s)	403
Psp124BI	GAGCTC	1 cut(s)	2905
Psp5II	RGGWCCY	3 cut(s)	1001, 2126, 2246
Psp6I	CCWGG	3 cut(s)	1663, 1872, 2248
PspEI	GGTNACC	1 cut(s)	2427
PspFI	CCCAGC	1 cut(s)	1740
PspGI	CCWGG	3 cut(s)	1663, 1872, 2248
PspN4I	GGNNCC	7 cut(s)	816, 817, 912, 1339, 1531, 1592, 2128
PspOMI	GGGCCC	1 cut(s)	815
PspPI	GGNCC	8 cut(s)	815, 816, 1001, 1530, 1850, 2126, 2246, 2725
PspPPI	RGGWCCY	3 cut(s)	1001, 2126, 2246
PstI	CTGCAG	2 cut(s)	1771, 2954
PstNI	CAGNNNCTG	1 cut(s)	2249
PsuI	RGATCY	8 cut(s)	355, 877, 1052, 1114, 1337, 1420, 1720, 2074
PvuII	CAGCTG	2 cut(s)	1740, 1766
RsaI	GTAC	7 cut(s)	76, 492, 705, 747, 1958, 2407, 3013
RsaNI	GTAC	7 cut(s)	75, 491, 704, 746, 1957, 2406, 3012
SacI	GAGCTC	1 cut(s)	2905
SaqAI	TTAA	7 cut(s)	1119, 1124, 1701, 2031, 2213, 2454, 2789
Sau96I	GGNCC	8 cut(s)	815, 816, 1001, 1530, 1850, 2126, 2246, 2725
ScaI	AGTACT	2 cut(s)	1958, 3013
ScrFI	CCNGG	6 cut(s)	813, 1665, 1874, 2250, 2728, 2729
SduI	GDGCHC	4 cut(s)	304, 819, 2830, 2905
SfaNI	GCATC	9 cut(s)	194, 478, 974, 1270, 1300, 1784, 1919, 1925, 2860
SfcI	CTRYAG	2 cut(s)	1767, 2950
SinI	GGWCC	5 cut(s)	1001, 1530, 1850, 2126, 2246
SmaI	CCCGGG	1 cut(s)	2729
SmlI	CTYRAG	3 cut(s)	1436, 1710, 1928
SmoI	CTYRAG	3 cut(s)	1436, 1710, 1928
SpeI	ACTAGT	1 cut(s)	2603
SsiI	CCGC	3 cut(s)	534, 2193, 2831
SspI	AATATT	1 cut(s)	2101
SstI	GAGCTC	1 cut(s)	2905
StyD4I	CCNGG	6 cut(s)	811, 1663, 1872, 2248, 2726, 2727
StyI	CCWWGG	4 cut(s)	1533, 1801, 2254, 2513
TaaI	ACNGT	9 cut(s)	213, 299, 504, 799, 954, 1502, 1586, 2786, 2825
TaiI	ACGT	5 cut(s)	80, 1435, 2141, 2447, 3040
TaqI	TCGA	4 cut(s)	968, 2530, 2564, 3002
TaqII	GACCGA	3 cut(s)	851, 1086, 2718
TatI	WGTACW	3 cut(s)	490, 1956, 3011
Tru1I	TTAA	7 cut(s)	1119, 1124, 1701, 2031, 2213, 2454, 2789
Tru9I	TTAA	7 cut(s)	1119, 1124, 1701, 2031, 2213, 2454, 2789
TscAI	CASTG	5 cut(s)	547, 1072, 1507, 1738, 2789
TseFI	GTSAC	8 cut(s)	207, 928, 1067, 1440, 1580, 1670, 1729, 2427
Tsp45I	GTSAC	8 cut(s)	207, 928, 1067, 1440, 1580, 1670, 1729, 2427
TspGWI	ACGGA	2 cut(s)	1194, 1874
TspMI	CCCGGG	1 cut(s)	2727
TspRI	CASTG	5 cut(s)	547, 1072, 1507, 1738, 2789
VpaK11BI	GGWCC	5 cut(s)	1001, 1530, 1850, 2126, 2246
XagI	CCTNNNNNAGG	2 cut(s)	2163, 2253
XapI	RAATTY	7 cut(s)	238, 253, 319, 645, 686, 937, 1241
XbaI	TCTAGA	2 cut(s)	1049, 1606
XmaI	CCCGGG	1 cut(s)	2727
XmaJI	CCTAGG	1 cut(s)	2513
XmiI	GTMKAC	1 cut(s)	2493
XmnI	GAANNNNTTC	1 cut(s)	915
ZrmI	AGTACT	2 cut(s)	1958, 3013
Zsp2I	ATGCAT	2 cut(s)	979, 1912

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.