homeobox protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G19510 AT3G19510 AT3G19530 |
| fragaria_vesca | FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 FvH4_2g04760 |
| malus_domestica | MD05G1092200.v1.1 MD10G1100500.v1.1 |
| prunus_persica | Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 Prupe.8G137800_v2.0.a1 |
| pyrus_communis | pycom05g09180 pycom10g08610 |
| rosa_chinensis | RchiOBHm_Chr6g0254411 |
| rosa_laevigata | RLG00000014914 |
| rosa_multiflora | Rmu_co8217068.1_g000001 Rmu_co8296759.1_g000001 Rmu_co8300769.1_g000001 Rmu_sc0009578.1_g000001 Rmu_ssc0000121.1_g000001 Rmu_ssc0000481.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00210820 |
| rosa_rugosa | Rorug05G0552100 |
| rosa_samantha | Rh6AG069200 Rh6BG061900 Rh6CG062000 Rh6DG059000 |
| rosa_wichuraiana | Rw6G006080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 447 |
| Acc36I | ACCTGC | 3 cut(s) | 814, 857, 977 |
| AclWI | GGATC | 7 cut(s) | 92, 165, 560, 1085, 1098, 1108, 1113 |
| AcoI | YGGCCR | 1 cut(s) | 334 |
| AcsI | RAATTY | 1 cut(s) | 1118 |
| AfaI | GTAC | 3 cut(s) | 171, 238, 1057 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 359, 671 |
| AgsI | TTSAA | 6 cut(s) | 82, 129, 197, 348, 754, 842 |
| AhlI | ACTAGT | 3 cut(s) | 680, 1052, 1139 |
| AjnI | CCWGG | 2 cut(s) | 964, 1093 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1070, 1102 |
| AluBI | AGCT | 8 cut(s) | 132, 167, 397, 660, 692, 725, 887, 947 |
| AluI | AGCT | 8 cut(s) | 132, 167, 397, 660, 692, 725, 887, 947 |
| Alw21I | GWGCWC | 1 cut(s) | 949 |
| Alw26I | GTCTC | 3 cut(s) | 280, 499, 908 |
| AlwI | GGATC | 7 cut(s) | 92, 165, 560, 1085, 1098, 1108, 1113 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 254, 332 |
| Ama87I | CYCGRG | 1 cut(s) | 716 |
| AoxI | GGCC | 3 cut(s) | 209, 334, 795 |
| ApaI | GGGCCC | 1 cut(s) | 213 |
| ApeKI | GCWGC | 4 cut(s) | 164, 397, 458, 993 |
| ApoI | RAATTY | 1 cut(s) | 1118 |
| AspA2I | CCTAGG | 1 cut(s) | 464 |
| AspS9I | GGNCC | 3 cut(s) | 209, 210, 796 |
| AsuHPI | GGTGA | 4 cut(s) | 215, 269, 630, 954 |
| AvaI | CYCGRG | 1 cut(s) | 716 |
| AvrII | CCTAGG | 1 cut(s) | 464 |
| BaeGI | GKGCMC | 1 cut(s) | 213 |
| BalI | TGGCCA | 1 cut(s) | 336 |
| BamHI | GGATCC | 1 cut(s) | 1090 |
| BanII | GRGCYC | 2 cut(s) | 213, 949 |
| BbsI | GAAGAC | 2 cut(s) | 718, 1055 |
| Bbv12I | GWGCWC | 1 cut(s) | 949 |
| BbvI | GCAGC | 4 cut(s) | 176, 384, 445, 980 |
| BccI | CCATC | 2 cut(s) | 335, 935 |
| BciT130I | CCWGG | 2 cut(s) | 966, 1095 |
| BclI | TGATCA | 1 cut(s) | 934 |
| BcoDI | GTCTC | 3 cut(s) | 280, 499, 908 |
| BcuI | ACTAGT | 3 cut(s) | 680, 1052, 1139 |
| BfaI | CTAG | 9 cut(s) | 42, 173, 465, 591, 681, 693, 806, 1053, 1140 |
| BfmI | CTRYAG | 1 cut(s) | 994 |
| BfuAI | ACCTGC | 3 cut(s) | 814, 857, 977 |
| BisI | GCNGC | 4 cut(s) | 165, 398, 459, 994 |
| BlnI | CCTAGG | 1 cut(s) | 464 |
| BlpI | GCTNAGC | 1 cut(s) | 819 |
| BlsI | GCNGC | 4 cut(s) | 166, 399, 460, 995 |
| BmcAI | AGTACT | 1 cut(s) | 1057 |
| Bme1390I | CCNGG | 2 cut(s) | 966, 1095 |
| BmeT110I | CYCGRG | 1 cut(s) | 716 |
| BmgT120I | GGNCC | 3 cut(s) | 209, 210, 796 |
| BmiI | GGNNCC | 3 cut(s) | 211, 212, 1092 |
| BmrFI | CCNGG | 2 cut(s) | 966, 1095 |
| BmrI | ACTGGG | 1 cut(s) | 208 |
| BmsI | GCATC | 4 cut(s) | 79, 707, 755, 919 |
| BmuI | ACTGGG | 1 cut(s) | 208 |
| BoxI | GACNNNNGTC | 1 cut(s) | 610 |
| BpiI | GAAGAC | 2 cut(s) | 718, 1055 |
| BpmI | CTGGAG | 2 cut(s) | 78, 483 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 819 |
| BpuEI | CTTGAG | 1 cut(s) | 867 |
| BsaAI | YACGTR | 1 cut(s) | 373 |
| BsaBI | GATNNNNATC | 2 cut(s) | 81, 933 |
| BsaJI | CCNNGG | 3 cut(s) | 464, 965, 1094 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1042, 1072 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 359, 671 |
| Bse1I | ACTGG | 3 cut(s) | 214, 490, 798 |
| Bse8I | GATNNNNATC | 2 cut(s) | 81, 933 |
| BseBI | CCWGG | 2 cut(s) | 966, 1095 |
| BseDI | CCNNGG | 3 cut(s) | 464, 965, 1094 |
| BseGI | GGATG | 3 cut(s) | 115, 746, 1009 |
| BseJI | GATNNNNATC | 2 cut(s) | 81, 933 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 359, 671 |
| BseMII | CTCAG | 3 cut(s) | 144, 746, 962 |
| BseNI | ACTGG | 3 cut(s) | 214, 490, 798 |
| BseSI | GKGCMC | 1 cut(s) | 213 |
| BseXI | GCAGC | 4 cut(s) | 176, 384, 445, 980 |
| BsgI | GTGCAG | 1 cut(s) | 444 |
| BshFI | GGCC | 3 cut(s) | 211, 336, 797 |
| BsiHKAI | GWGCWC | 1 cut(s) | 949 |
| BsiHKCI | CYCGRG | 1 cut(s) | 716 |
| BslFI | GGGAC | 1 cut(s) | 982 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 359, 671 |
| BsmAI | GTCTC | 3 cut(s) | 280, 499, 908 |
| BsmFI | GGGAC | 1 cut(s) | 982 |
| BsnI | GGCC | 3 cut(s) | 211, 336, 797 |
| BsoBI | CYCGRG | 1 cut(s) | 716 |
| Bsp120I | GGGCCC | 1 cut(s) | 209 |
| Bsp1286I | GDGCHC | 2 cut(s) | 213, 949 |
| Bsp143I | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 819 |
| BspANI | GGCC | 3 cut(s) | 211, 336, 797 |
| BspCNI | CTCAG | 3 cut(s) | 145, 745, 961 |
| BspLI | GGNNCC | 3 cut(s) | 211, 212, 1092 |
| BspMAI | CTGCAG | 1 cut(s) | 998 |
| BspMI | ACCTGC | 3 cut(s) | 814, 857, 977 |
| BspPI | GGATC | 7 cut(s) | 92, 165, 560, 1085, 1098, 1108, 1113 |
| BsrI | ACTGG | 3 cut(s) | 214, 490, 798 |
| BssECI | CCNNGG | 3 cut(s) | 464, 965, 1094 |
| BssMI | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| BssT1I | CCWWGG | 1 cut(s) | 464 |
| Bst2UI | CCWGG | 2 cut(s) | 966, 1095 |
| Bst4CI | ACNGT | 4 cut(s) | 59, 125, 522, 982 |
| Bst6I | CTCTTC | 1 cut(s) | 278 |
| BstBAI | YACGTR | 1 cut(s) | 373 |
| BstC8I | GCNNGC | 2 cut(s) | 26, 850 |
| BstDEI | CTNAG | 5 cut(s) | 153, 666, 732, 819, 948 |
| BstF5I | GGATG | 3 cut(s) | 115, 746, 1009 |
| BstKTI | GATC | 7 cut(s) | 100, 160, 568, 937, 1093, 1103, 1108 |
| BstMAI | GTCTC | 3 cut(s) | 280, 499, 908 |
| BstMBI | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 30, 872 |
| BstNI | CCWGG | 2 cut(s) | 966, 1095 |
| BstNSI | RCATGY | 1 cut(s) | 28 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 610 |
| BstSCI | CCNGG | 2 cut(s) | 964, 1093 |
| BstSFI | CTRYAG | 1 cut(s) | 994 |
| BstSLI | GKGCMC | 1 cut(s) | 213 |
| BstV1I | GCAGC | 4 cut(s) | 176, 384, 445, 980 |
| BstV2I | GAAGAC | 2 cut(s) | 718, 1055 |
| BstX2I | RGATCY | 4 cut(s) | 97, 157, 1090, 1105 |
| BstYI | RGATCY | 4 cut(s) | 97, 157, 1090, 1105 |
| BsuRI | GGCC | 3 cut(s) | 211, 336, 797 |
| BtsCI | GGATG | 3 cut(s) | 115, 746, 1009 |
| BtsIMutI | CAGTG | 1 cut(s) | 483 |
| BveI | ACCTGC | 3 cut(s) | 814, 857, 977 |
| Cac8I | GCNNGC | 2 cut(s) | 26, 850 |
| CaiI | CAGNNNCTG | 2 cut(s) | 254, 332 |
| Cfr13I | GGNCC | 3 cut(s) | 209, 210, 796 |
| CseI | GACGC | 1 cut(s) | 492 |
| Csp6I | GTAC | 3 cut(s) | 170, 237, 1056 |
| CviAII | CATG | 4 cut(s) | 25, 38, 401, 814 |
| CviQI | GTAC | 3 cut(s) | 170, 237, 1056 |
| DdeI | CTNAG | 5 cut(s) | 153, 666, 732, 819, 948 |
| DpnI | GATC | 7 cut(s) | 99, 159, 567, 936, 1092, 1102, 1107 |
| DpnII | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| EaeI | YGGCCR | 1 cut(s) | 334 |
| Eam1104I | CTCTTC | 1 cut(s) | 278 |
| EarI | CTCTTC | 1 cut(s) | 278 |
| Ecl136II | GAGCTC | 1 cut(s) | 947 |
| Eco130I | CCWWGG | 1 cut(s) | 464 |
| Eco24I | GRGCYC | 2 cut(s) | 213, 949 |
| Eco32I | GATATC | 1 cut(s) | 309 |
| Eco53kI | GAGCTC | 1 cut(s) | 947 |
| Eco88I | CYCGRG | 1 cut(s) | 716 |
| EcoICRI | GAGCTC | 1 cut(s) | 947 |
| EcoO109I | RGGNCCY | 2 cut(s) | 209, 210 |
| EcoRII | CCWGG | 2 cut(s) | 964, 1093 |
| EcoRV | GATATC | 1 cut(s) | 309 |
| EcoT14I | CCWWGG | 1 cut(s) | 464 |
| EcoT22I | ATGCAT | 1 cut(s) | 748 |
| EcoT38I | GRGCYC | 2 cut(s) | 213, 949 |
| ErhI | CCWWGG | 1 cut(s) | 464 |
| FaeI | CATG | 4 cut(s) | 28, 41, 404, 817 |
| FaqI | GGGAC | 1 cut(s) | 982 |
| FatI | CATG | 4 cut(s) | 24, 37, 400, 813 |
| FbaI | TGATCA | 1 cut(s) | 934 |
| Fnu4HI | GCNGC | 4 cut(s) | 165, 398, 459, 994 |
| FokI | GGATG | 3 cut(s) | 122, 733, 1016 |
| FriOI | GRGCYC | 2 cut(s) | 213, 949 |
| Fsp4HI | GCNGC | 4 cut(s) | 165, 398, 459, 994 |
| FspBI | CTAG | 9 cut(s) | 42, 173, 465, 591, 681, 693, 806, 1053, 1140 |
| GluI | GCNGC | 4 cut(s) | 165, 398, 459, 994 |
| GsuI | CTGGAG | 2 cut(s) | 78, 483 |
| HaeIII | GGCC | 3 cut(s) | 211, 336, 797 |
| HgaI | GACGC | 1 cut(s) | 492 |
| Hin1II | CATG | 4 cut(s) | 28, 41, 404, 817 |
| HincII | GTYRAC | 1 cut(s) | 525 |
| HindII | GTYRAC | 1 cut(s) | 525 |
| HphI | GGTGA | 4 cut(s) | 215, 269, 630, 954 |
| Hpy166II | GTNNAC | 2 cut(s) | 525, 638 |
| Hpy188I | TCNGA | 7 cut(s) | 136, 148, 154, 328, 926, 951, 1105 |
| Hpy188III | TCNNGA | 6 cut(s) | 86, 95, 569, 938, 1001, 1109 |
| Hpy8I | GTNNAC | 2 cut(s) | 525, 638 |
| Hpy99I | CGWCG | 2 cut(s) | 609, 1170 |
| HpyAV | CCTTC | 5 cut(s) | 200, 224, 760, 778, 1003 |
| HpyCH4III | ACNGT | 4 cut(s) | 59, 125, 522, 982 |
| HpyCH4IV | ACGT | 2 cut(s) | 274, 372 |
| HpyCH4V | TGCA | 4 cut(s) | 400, 461, 746, 996 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 30, 872 |
| HpyF3I | CTNAG | 5 cut(s) | 153, 666, 732, 819, 948 |
| HpySE526I | ACGT | 2 cut(s) | 274, 372 |
| Hsp92II | CATG | 4 cut(s) | 28, 41, 404, 817 |
| Ksp22I | TGATCA | 1 cut(s) | 934 |
| Kzo9I | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| LmnI | GCTCC | 2 cut(s) | 97, 944 |
| Lsp1109I | GCAGC | 4 cut(s) | 176, 384, 445, 980 |
| LweI | GCATC | 4 cut(s) | 79, 707, 755, 919 |
| MaeI | CTAG | 9 cut(s) | 42, 173, 465, 591, 681, 693, 806, 1053, 1140 |
| MaeII | ACGT | 2 cut(s) | 274, 372 |
| MaeIII | GTNAC | 5 cut(s) | 64, 504, 541, 727, 1156 |
| MalI | GATC | 7 cut(s) | 99, 159, 567, 936, 1092, 1102, 1107 |
| MboI | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| MboII | GAAGA | 7 cut(s) | 295, 452, 487, 606, 723, 964, 1060 |
| MflI | RGATCY | 4 cut(s) | 97, 157, 1090, 1105 |
| MhlI | GDGCHC | 2 cut(s) | 213, 949 |
| MlsI | TGGCCA | 1 cut(s) | 336 |
| MluCI | AATT | 2 cut(s) | 1019, 1118 |
| MluNI | TGGCCA | 1 cut(s) | 336 |
| MlyI | GAGTC | 5 cut(s) | 143, 332, 708, 819, 1021 |
| MmeI | TCCRAC | 2 cut(s) | 207, 1068 |
| MnlI | CCTC | 9 cut(s) | 100, 148, 172, 372, 400, 556, 612, 891, 1068 |
| Mox20I | TGGCCA | 1 cut(s) | 336 |
| Mph1103I | ATGCAT | 1 cut(s) | 748 |
| MscI | TGGCCA | 1 cut(s) | 336 |
| MseI | TTAA | 5 cut(s) | 6, 114, 531, 654, 1122 |
| Msp20I | TGGCCA | 1 cut(s) | 336 |
| MspA1I | CMGCKG | 1 cut(s) | 167 |
| MspR9I | CCNGG | 2 cut(s) | 966, 1095 |
| MvaI | CCWGG | 2 cut(s) | 966, 1095 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 30, 872 |
| NdeII | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| NlaIII | CATG | 4 cut(s) | 28, 41, 404, 817 |
| NlaIV | GGNNCC | 3 cut(s) | 211, 212, 1092 |
| NmuCI | GTSAC | 1 cut(s) | 504 |
| NsiI | ATGCAT | 1 cut(s) | 748 |
| NspI | RCATGY | 1 cut(s) | 28 |
| PaeI | GCATGC | 1 cut(s) | 28 |
| PfeI | GAWTC | 5 cut(s) | 18, 45, 329, 647, 959 |
| PkrI | GCNGC | 4 cut(s) | 166, 399, 460, 995 |
| PleI | GAGTC | 5 cut(s) | 143, 331, 708, 818, 1021 |
| PpsI | GAGTC | 5 cut(s) | 143, 331, 708, 818, 1021 |
| Ppu21I | YACGTR | 1 cut(s) | 373 |
| PshAI | GACNNNNGTC | 1 cut(s) | 610 |
| PsiI | TTATAA | 1 cut(s) | 447 |
| Psp124BI | GAGCTC | 1 cut(s) | 949 |
| Psp6I | CCWGG | 2 cut(s) | 964, 1093 |
| PspGI | CCWGG | 2 cut(s) | 964, 1093 |
| PspN4I | GGNNCC | 3 cut(s) | 211, 212, 1092 |
| PspOMI | GGGCCC | 1 cut(s) | 209 |
| PspPI | GGNCC | 3 cut(s) | 209, 210, 796 |
| PstI | CTGCAG | 1 cut(s) | 998 |
| PstNI | CAGNNNCTG | 2 cut(s) | 254, 332 |
| PsuI | RGATCY | 4 cut(s) | 97, 157, 1090, 1105 |
| PvuII | CAGCTG | 1 cut(s) | 167 |
| RsaI | GTAC | 3 cut(s) | 171, 238, 1057 |
| RsaNI | GTAC | 3 cut(s) | 170, 237, 1056 |
| SacI | GAGCTC | 1 cut(s) | 949 |
| SaqAI | TTAA | 5 cut(s) | 6, 114, 531, 654, 1122 |
| SatI | GCNGC | 4 cut(s) | 165, 398, 459, 994 |
| Sau3AI | GATC | 7 cut(s) | 97, 157, 565, 934, 1090, 1100, 1105 |
| Sau96I | GGNCC | 3 cut(s) | 209, 210, 796 |
| ScaI | AGTACT | 1 cut(s) | 1057 |
| SchI | GAGTC | 5 cut(s) | 143, 332, 708, 819, 1021 |
| ScrFI | CCNGG | 2 cut(s) | 966, 1095 |
| SduI | GDGCHC | 2 cut(s) | 213, 949 |
| SfaNI | GCATC | 4 cut(s) | 79, 707, 755, 919 |
| SfcI | CTRYAG | 1 cut(s) | 994 |
| SmlI | CTYRAG | 1 cut(s) | 882 |
| SmoI | CTYRAG | 1 cut(s) | 882 |
| SpeI | ACTAGT | 3 cut(s) | 680, 1052, 1139 |
| SphI | GCATGC | 1 cut(s) | 28 |
| Sse9I | AATT | 2 cut(s) | 1019, 1118 |
| SspI | AATATT | 1 cut(s) | 421 |
| SspMI | CTAG | 9 cut(s) | 42, 173, 465, 591, 681, 693, 806, 1053, 1140 |
| SstI | GAGCTC | 1 cut(s) | 949 |
| StyD4I | CCNGG | 2 cut(s) | 964, 1093 |
| StyI | CCWWGG | 1 cut(s) | 464 |
| TaaI | ACNGT | 4 cut(s) | 59, 125, 522, 982 |
| TaiI | ACGT | 2 cut(s) | 277, 375 |
| TaqI | TCGA | 3 cut(s) | 48, 604, 1153 |
| TaqII | GACCGA | 1 cut(s) | 789 |
| TasI | AATT | 2 cut(s) | 1019, 1118 |
| TatI | WGTACW | 2 cut(s) | 169, 1055 |
| TfiI | GAWTC | 5 cut(s) | 18, 45, 329, 647, 959 |
| Tru1I | TTAA | 5 cut(s) | 6, 114, 531, 654, 1122 |
| Tru9I | TTAA | 5 cut(s) | 6, 114, 531, 654, 1122 |
| TscAI | CASTG | 1 cut(s) | 490 |
| TseFI | GTSAC | 1 cut(s) | 504 |
| TseI | GCWGC | 4 cut(s) | 164, 397, 458, 993 |
| Tsp45I | GTSAC | 1 cut(s) | 504 |
| TspDTI | ATGAA | 6 cut(s) | 453, 465, 660, 797, 972, 1128 |
| TspGWI | ACGGA | 1 cut(s) | 1183 |
| TspRI | CASTG | 1 cut(s) | 490 |
| XapI | RAATTY | 1 cut(s) | 1118 |
| XceI | RCATGY | 1 cut(s) | 28 |
| XmaJI | CCTAGG | 1 cut(s) | 464 |
| XspI | CTAG | 9 cut(s) | 42, 173, 465, 591, 681, 693, 806, 1053, 1140 |
| ZrmI | AGTACT | 1 cut(s) | 1057 |
| Zsp2I | ATGCAT | 1 cut(s) | 748 |