Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009097

Physical Location & Seq

Genomic Coordinates Forward (+)

15898339 .. 15900791

Gene Structure 2453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G141000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 780 bp

ATGACGGCCGTTTTCAGAAGAAACACTAACATCACCCGCCTTCTACACAAGCACTCCATCACCGACCCGATCGGAGCCCGGACTCTTCTCCAATCCCAAACGCAGTCCAAAGCCTACCTCCGCTTCCCCCAAGTTTTCCGGAAAGCCCGAGACTACGACCTCTCTCCCTCTGTCTTCTCCTCCGCCTTTTCTTCCTCCAAGTCCTCTGCTGAAACGACGTCGGTTTCTAAGCTTGGGTTCGTGGGTTGGTATCTGGGTATGCTCCAGCACCGGCCCATTTTGACAAAGAGTGTCACTGCAGCGCTTATTTACACTGCTGCTGATTTGTCTTCCCAGACATTAGCAAAATCATCATTTTCAGAATCTTATGATGCTGTAAGGACATTGCGCATGGCTGGATATGGGATGCTGGTTTTAGGGCCATCCATGCATTTCTGGTTCAATTTCATGTCAAGAGTCTTCCCAAAACGTGATATTTTCTCTACATTGAAGAAAATGGCTATGGGGCAGACGCTTTATGGACCTGCCATGACTGTTGTTTTCTTCTCCTTGAATGCATGTCTACAAGGTGAAAACGGTACAGAAATTGGTGCCCGTTTAAAGCGAGACTTGTTCCCGACATTGTTAAATGGTGTTATGTACTGGCCACTATGCGATTTTATCACATTCAGATTCATTCCTGTCCAATTACAGCCATTAGTGAGCAATGGATTTTCGTATCTGTGGACCATTTATATGACATACATGGCAGGCCTGGAGAAAGCAGGCACAACTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04146 map04146

Pfam Domains

Protein Families

Mpv17_PMP22

Protein Analysis

260

Amino Acids

29.11

Weight (kDa)

9.97

Isoelectric Point (pI)

54.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009097)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14860 AT4G33905
fragaria_vesca	FvH4_2g03950 FvH4_2g03950 FvH4_2g03950 FvH4_2g03950
malus_domestica	MD05G1096500.v1.1 MD10G1102900.v1.1
prunus_persica	Prupe.8G141000_v2.0.a1
pyrus_communis	pycom05g09540 pycom10g08860
rosa_chinensis	RchiOBHm_Chr6g0253001
rosa_laevigata	RLG00000015045
rosa_multiflora	Rmu_co8421641.1_g000001 Rmu_sc0002560.1_g000009
rosa_roxburghii	Rroxscaffold_7G00212210
rosa_rugosa	Rorug05G0542800
rosa_samantha	Rh6AG056600 Rh6BG051000 Rh6CG049000 Rh6DG044700
rosa_wichuraiana	Rw6G005170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	221
Acc16I	TGCGCA	1 cut(s)	389
Acc36I	ACCTGC	1 cut(s)	532
AccB1I	GGYRCC	1 cut(s)	590
AccI	GTMKAC	1 cut(s)	562
AccIII	TCCGGA	1 cut(s)	138
AciI	CCGC	3 cut(s)	37, 121, 183
AcoI	YGGCCR	2 cut(s)	6, 644
AcyI	GRCGYC	1 cut(s)	218
AfaI	GTAC	2 cut(s)	580, 641
AfeI	AGCGCT	1 cut(s)	303
AgsI	TTSAA	3 cut(s)	442, 490, 553
AjnI	CCWGG	1 cut(s)	753
AluBI	AGCT	1 cut(s)	232
AluI	AGCT	1 cut(s)	232
Alw26I	GTCTC	2 cut(s)	144, 600
Ama87I	CYCGRG	1 cut(s)	147
Aor13HI	TCCGGA	1 cut(s)	138
Aor51HI	AGCGCT	1 cut(s)	303
AoxI	GGCC	5 cut(s)	6, 272, 419, 644, 751
ApeKI	GCWGC	2 cut(s)	299, 317
AspLEI	GCGC	2 cut(s)	304, 390
AspS9I	GGNCC	4 cut(s)	273, 419, 521, 726
AsuC2I	CCSGG	1 cut(s)	79
AsuHPI	GGTGA	3 cut(s)	25, 52, 581
AvaI	CYCGRG	1 cut(s)	147
AvaII	GGWCC	2 cut(s)	521, 726
BaeGI	GKGCMC	1 cut(s)	595
BalI	TGGCCA	1 cut(s)	646
BanI	GGYRCC	1 cut(s)	590
BanII	GRGCYC	1 cut(s)	79
BbsI	GAAGAC	3 cut(s)	166, 321, 451
BbvI	GCAGC	2 cut(s)	304, 311
BccI	CCATC	2 cut(s)	65, 430
BceAI	ACGGC	1 cut(s)	21
BciT130I	CCWGG	1 cut(s)	755
BcnI	CCSGG	1 cut(s)	79
BcoDI	GTCTC	2 cut(s)	144, 600
BfaI	CTAG	1 cut(s)	778
BfmI	CTRYAG	1 cut(s)	297
BfoI	RGCGCY	1 cut(s)	305
BfuAI	ACCTGC	1 cut(s)	532
BisI	GCNGC	2 cut(s)	300, 318
BlsI	GCNGC	2 cut(s)	301, 319
Bme1390I	CCNGG	2 cut(s)	79, 755
Bme18I	GGWCC	2 cut(s)	521, 726
BmeT110I	CYCGRG	1 cut(s)	147
BmgT120I	GGNCC	4 cut(s)	273, 419, 521, 726
BmiI	GGNNCC	2 cut(s)	76, 592
BmrFI	CCNGG	2 cut(s)	79, 755
BmsI	GCATC	2 cut(s)	361, 396
BpiI	GAAGAC	3 cut(s)	166, 321, 451
BpmI	CTGGAG	2 cut(s)	248, 776
BpuMI	CCSGG	1 cut(s)	79
BsaHI	GRCGYC	1 cut(s)	218
BsaWI	WCCGGW	1 cut(s)	138
BsaXI	ACNNNNNCTCC	2 cut(s)	38, 68
Bse118I	RCCGGY	1 cut(s)	270
Bse1I	ACTGG	1 cut(s)	647
Bse3DI	GCAATG	2 cut(s)	383, 712
BseAI	TCCGGA	1 cut(s)	138
BseBI	CCWGG	1 cut(s)	755
BseGI	GGATG	2 cut(s)	411, 422
BseMI	GCAATG	2 cut(s)	383, 712
BseNI	ACTGG	1 cut(s)	647
BseRI	GAGGAG	1 cut(s)	169
BseSI	GKGCMC	1 cut(s)	595
BseX3I	CGGCCG	1 cut(s)	6
BseXI	GCAGC	2 cut(s)	304, 311
Bsh1285I	CGRYCG	2 cut(s)	9, 72
BshFI	GGCC	5 cut(s)	8, 274, 421, 646, 753
BshNI	GGYRCC	1 cut(s)	590
BsiEI	CGRYCG	2 cut(s)	9, 72
BsiHKCI	CYCGRG	1 cut(s)	147
BsiSI	CCGG	3 cut(s)	79, 139, 271
BsmAI	GTCTC	2 cut(s)	144, 600
BsmI	GAATGC	1 cut(s)	559
BsnI	GGCC	5 cut(s)	8, 274, 421, 646, 753
BsoBI	CYCGRG	1 cut(s)	147
Bsp1286I	GDGCHC	2 cut(s)	79, 595
Bsp13I	TCCGGA	1 cut(s)	138
Bsp143I	GATC	1 cut(s)	69
BspACI	CCGC	3 cut(s)	37, 121, 183
BspANI	GGCC	5 cut(s)	8, 274, 421, 646, 753
BspEI	TCCGGA	1 cut(s)	138
BspLI	GGNNCC	2 cut(s)	76, 592
BspMAI	CTGCAG	1 cut(s)	301
BspMI	ACCTGC	1 cut(s)	532
BspT107I	GGYRCC	1 cut(s)	590
BsrDI	GCAATG	2 cut(s)	383, 712
BsrFI	RCCGGY	1 cut(s)	270
BsrI	ACTGG	1 cut(s)	647
BssAI	RCCGGY	1 cut(s)	270
BssMI	GATC	1 cut(s)	69
BssNI	GRCGYC	1 cut(s)	218
Bst2UI	CCWGG	1 cut(s)	755
Bst4CI	ACNGT	2 cut(s)	535, 578
Bst6I	CTCTTC	1 cut(s)	90
BstACI	GRCGYC	1 cut(s)	218
BstC8I	GCNNGC	2 cut(s)	751, 766
BstDEI	CTNAG	1 cut(s)	228
BstF5I	GGATG	2 cut(s)	411, 422
BstH2I	RGCGCY	1 cut(s)	305
BstHHI	GCGC	2 cut(s)	304, 390
BstKTI	GATC	1 cut(s)	72
BstMAI	GTCTC	2 cut(s)	144, 600
BstMBI	GATC	1 cut(s)	69
BstMCI	CGRYCG	2 cut(s)	9, 72
BstMWI	GCNNNNNNNGC	1 cut(s)	427
BstNI	CCWGG	1 cut(s)	755
BstNSI	RCATGY	1 cut(s)	561
BstSCI	CCNGG	2 cut(s)	77, 753
BstSFI	CTRYAG	1 cut(s)	297
BstSLI	GKGCMC	1 cut(s)	595
BstV1I	GCAGC	2 cut(s)	304, 311
BstV2I	GAAGAC	3 cut(s)	166, 321, 451
BstZI	CGGCCG	1 cut(s)	6
BsuRI	GGCC	5 cut(s)	8, 274, 421, 646, 753
BtsCI	GGATG	2 cut(s)	411, 422
BtsI	GCAGTG	2 cut(s)	294, 312
BtsIMutI	CAGTG	2 cut(s)	294, 312
BveI	ACCTGC	1 cut(s)	532
Cac8I	GCNNGC	2 cut(s)	751, 766
CfoI	GCGC	2 cut(s)	304, 390
Cfr10I	RCCGGY	1 cut(s)	270
Cfr13I	GGNCC	4 cut(s)	273, 419, 521, 726
CseI	GACGC	1 cut(s)	520
Csp6I	GTAC	2 cut(s)	579, 640
CviAII	CATG	6 cut(s)	391, 427, 448, 529, 558, 745
CviQI	GTAC	2 cut(s)	579, 640
DdeI	CTNAG	1 cut(s)	228
DpnI	GATC	1 cut(s)	71
DpnII	GATC	1 cut(s)	69
DraI	TTTAAA	1 cut(s)	600
EaeI	YGGCCR	2 cut(s)	6, 644
EagI	CGGCCG	1 cut(s)	6
Eam1104I	CTCTTC	1 cut(s)	90
EarI	CTCTTC	1 cut(s)	90
EciI	GGCGGA	1 cut(s)	172
EclXI	CGGCCG	1 cut(s)	6
Eco147I	AGGCCT	1 cut(s)	753
Eco24I	GRGCYC	1 cut(s)	79
Eco47I	GGWCC	2 cut(s)	521, 726
Eco47III	AGCGCT	1 cut(s)	303
Eco52I	CGGCCG	1 cut(s)	6
Eco88I	CYCGRG	1 cut(s)	147
EcoRII	CCWGG	1 cut(s)	753
EcoT22I	ATGCAT	2 cut(s)	432, 559
EcoT38I	GRGCYC	1 cut(s)	79
FaeI	CATG	6 cut(s)	394, 430, 451, 532, 561, 748
FalI	AAGNNNNNCTT	2 cut(s)	593, 625
FatI	CATG	6 cut(s)	390, 426, 447, 528, 557, 744
FauI	CCCGC	1 cut(s)	44
FblI	GTMKAC	1 cut(s)	562
Fnu4HI	GCNGC	2 cut(s)	300, 318
FokI	GGATG	2 cut(s)	409, 418
FriOI	GRGCYC	1 cut(s)	79
Fsp4HI	GCNGC	2 cut(s)	300, 318
FspBI	CTAG	1 cut(s)	778
FspI	TGCGCA	1 cut(s)	389
GlaI	GCGC	2 cut(s)	303, 389
GluI	GCNGC	2 cut(s)	300, 318
GsuI	CTGGAG	2 cut(s)	248, 776
HaeII	RGCGCY	1 cut(s)	305
HaeIII	GGCC	5 cut(s)	8, 274, 421, 646, 753
HapII	CCGG	3 cut(s)	79, 139, 271
HgaI	GACGC	1 cut(s)	520
HhaI	GCGC	2 cut(s)	304, 390
Hin1I	GRCGYC	1 cut(s)	218
Hin1II	CATG	6 cut(s)	394, 430, 451, 532, 561, 748
Hin6I	GCGC	2 cut(s)	302, 388
HinP1I	GCGC	2 cut(s)	302, 388
HindIII	AAGCTT	1 cut(s)	230
HinfI	GANTC	4 cut(s)	82, 362, 456, 672
HpaII	CCGG	3 cut(s)	79, 139, 271
HphI	GGTGA	3 cut(s)	25, 52, 581
Hpy166II	GTNNAC	2 cut(s)	563, 726
Hpy188I	TCNGA	4 cut(s)	17, 74, 361, 671
Hpy188III	TCNNGA	3 cut(s)	139, 453, 616
Hpy8I	GTNNAC	2 cut(s)	563, 726
Hpy99I	CGWCG	2 cut(s)	220, 223
HpyAV	CCTTC	1 cut(s)	50
HpyCH4III	ACNGT	2 cut(s)	535, 578
HpyCH4IV	ACGT	2 cut(s)	218, 469
HpyCH4V	TGCA	3 cut(s)	299, 430, 557
HpyF10VI	GCNNNNNNNGC	1 cut(s)	427
HpyF3I	CTNAG	1 cut(s)	228
HpySE526I	ACGT	2 cut(s)	218, 469
Hsp92I	GRCGYC	1 cut(s)	218
Hsp92II	CATG	6 cut(s)	394, 430, 451, 532, 561, 748
HspAI	GCGC	2 cut(s)	302, 388
Kpn2I	TCCGGA	1 cut(s)	138
Kzo9I	GATC	1 cut(s)	69
LmnI	GCTCC	2 cut(s)	74, 267
Lsp1109I	GCAGC	2 cut(s)	304, 311
LweI	GCATC	2 cut(s)	361, 396
MaeI	CTAG	1 cut(s)	778
MaeII	ACGT	2 cut(s)	218, 469
MaeIII	GTNAC	1 cut(s)	292
MalI	GATC	1 cut(s)	71
MboI	GATC	1 cut(s)	69
MboII	GAAGA	8 cut(s)	30, 77, 166, 183, 321, 451, 502, 535
MhlI	GDGCHC	2 cut(s)	79, 595
MlsI	TGGCCA	1 cut(s)	646
MluCI	AATT	3 cut(s)	442, 585, 686
MluNI	TGGCCA	1 cut(s)	646
MlyI	GAGTC	2 cut(s)	76, 465
MnlI	CCTC	6 cut(s)	128, 170, 178, 190, 205, 214
Mox20I	TGGCCA	1 cut(s)	646
Mph1103I	ATGCAT	2 cut(s)	432, 559
MroI	TCCGGA	1 cut(s)	138
MscI	TGGCCA	1 cut(s)	646
MseI	TTAA	2 cut(s)	599, 626
MslI	CAYNNNNRTG	1 cut(s)	734
Msp20I	TGGCCA	1 cut(s)	646
MspI	CCGG	3 cut(s)	79, 139, 271
MspR9I	CCNGG	2 cut(s)	79, 755
Mva1269I	GAATGC	1 cut(s)	559
MvaI	CCWGG	1 cut(s)	755
MwoI	GCNNNNNNNGC	1 cut(s)	427
NciI	CCSGG	1 cut(s)	79
NdeII	GATC	1 cut(s)	69
NlaIII	CATG	6 cut(s)	394, 430, 451, 532, 561, 748
NlaIV	GGNNCC	2 cut(s)	76, 592
NmuCI	GTSAC	1 cut(s)	292
NsbI	TGCGCA	1 cut(s)	389
NsiI	ATGCAT	2 cut(s)	432, 559
NspI	RCATGY	1 cut(s)	561
PceI	AGGCCT	1 cut(s)	753
PctI	GAATGC	1 cut(s)	559
PfeI	GAWTC	2 cut(s)	362, 672
PkrI	GCNGC	2 cut(s)	301, 319
Ple19I	CGATCG	1 cut(s)	72
PleI	GAGTC	2 cut(s)	76, 464
PpsI	GAGTC	2 cut(s)	76, 464
Psp6I	CCWGG	1 cut(s)	753
PspGI	CCWGG	1 cut(s)	753
PspN4I	GGNNCC	2 cut(s)	76, 592
PspPI	GGNCC	4 cut(s)	273, 419, 521, 726
PstI	CTGCAG	1 cut(s)	301
PvuI	CGATCG	1 cut(s)	72
RsaI	GTAC	2 cut(s)	580, 641
RsaNI	GTAC	2 cut(s)	579, 640
RseI	CAYNNNNRTG	1 cut(s)	734
SaqAI	TTAA	2 cut(s)	599, 626
SatI	GCNGC	2 cut(s)	300, 318
Sau3AI	GATC	1 cut(s)	69
Sau96I	GGNCC	4 cut(s)	273, 419, 521, 726
SchI	GAGTC	2 cut(s)	76, 465
ScrFI	CCNGG	2 cut(s)	79, 755
SduI	GDGCHC	2 cut(s)	79, 595
SetI	ASST	7 cut(s)	120, 162, 221, 234, 472, 526, 571
SfaNI	GCATC	2 cut(s)	361, 396
SfcI	CTRYAG	1 cut(s)	297
SinI	GGWCC	2 cut(s)	521, 726
SmiMI	CAYNNNNRTG	1 cut(s)	734
Sse9I	AATT	3 cut(s)	442, 585, 686
SseBI	AGGCCT	1 cut(s)	753
SsiI	CCGC	3 cut(s)	37, 121, 183
SspMI	CTAG	1 cut(s)	778
StuI	AGGCCT	1 cut(s)	753
StyD4I	CCNGG	2 cut(s)	77, 753
TaaI	ACNGT	2 cut(s)	535, 578
TaiI	ACGT	2 cut(s)	221, 472
TasI	AATT	3 cut(s)	442, 585, 686
TatI	WGTACW	1 cut(s)	639
TfiI	GAWTC	2 cut(s)	362, 672
Tru1I	TTAA	2 cut(s)	599, 626
Tru9I	TTAA	2 cut(s)	599, 626
TscAI	CASTG	2 cut(s)	301, 319
TseFI	GTSAC	1 cut(s)	292
TseI	GCWGC	2 cut(s)	299, 317
Tsp45I	GTSAC	1 cut(s)	292
TspDTI	ATGAA	2 cut(s)	436, 664
TspRI	CASTG	2 cut(s)	301, 319
VpaK11BI	GGWCC	2 cut(s)	521, 726
XceI	RCATGY	1 cut(s)	561
XmiI	GTMKAC	1 cut(s)	562
XspI	CTAG	1 cut(s)	778
ZraI	GACGTC	1 cut(s)	219
Zsp2I	ATGCAT	2 cut(s)	432, 559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.