Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0001864

Physical Location & Seq

Genomic Coordinates Forward (+)

7368587 .. 7372756

Gene Structure 4170 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGCTCCAGCGAGCAATTGGTTGTCCTTCTCTCTCATGTCTCCCATGGAAATGTTGAGGTCCTCTGAGTCCGATCAATCTCCCTTCGTCCCCTACGACGCGTCCTCCACCGCCTCCCCCCACTACTTCCTCGACAACTTCTATGCCAGCAACGGGTGGCCGACAAACCCAAAATCCCAAGTGTTTTTCGCAGACGGTGAGGACCAAAGCAAGCAGCAGGGCCAGTCCGGTTCACCAAATCCGTCACCGTTCGTCGACCCACAGAGCCACACCCAGCATATCCCGAAGCTCGAGGACTTTCTCGGCGATTCGTCATCGATGGTGCGCTATTCTGATAGCCAAACAGAGACCCAAGGCTCGTCGTCCATGACTCACATCTACGACCAGAGCTCCGCCTACTTCGGCGGCGACCAGCACCAGCAGCAGCAGCAGCACCAGGAAGATCTCAAGGCGATTACTGGGTTCCAAGCGTTTTCGACCAACTCGGGCTCGGAGGTGGAGGACTCGGCGTCCATGGCCCGGACGACTCAGCAGCAGCAGCTCGCTTGCGCCGAGTTCGCGGGTCATTCTATTGAGTCGACCGGGAACGAGTTAGGGGTGTACAACTCGAGCTGCGCGGCGAATGCTTTGTCGCTTGGTGTCACCACCACTCAGAGCTCTTCTGATCAGAAGGCCATTGTTGCCGTCGACAACGACGGCTCTAAGAAGATTGCTGATACTTTTGGCCAGAGGACTTCAATTTACAGAGGGGGTCAGGCCAGGAAGGGGCGTCAAGGTGGATACGACAAGGAAGATAAGGCAGCAAGGGCTTATGATTTGGCTGCTCTGAAATACTGGGGTCCTACTGCAACAACCAACTTTCCTGTAATGCATATACTGTTAATTCTAATATATTTAGAATATTCTTTTGTTCTTGCAATGAAATTATCTGACAGAGAAGTGGACTGCAAAGTACTTAGCATTTGGTTTTTGAATTCTCAGGTTTCAACTTACAGCAAAGAACTGGAAGATATGAAGCATGTGACCAAGCAAGAGTTCATCGCCTCTCTCAGAAGGAAAAGCAGTGGTTTTTCAAGAGGAGCTTCTATTTACAGGGGAGTTACAAGGCATCATCAACAAGGCCGATGGCAAGCAAGAATAGGCCGTGTGGCCGGGAACAAAGACCTATACCTGGGAACATTTGCTACTGAAGAGGAAGCAGCAGAGGCGTATGATATAGCGGCCATAAAGTTTAGGGGCATTAATGCAGTTACAAATTTTGAGATGAACCGATATGACGTTGAAGCTATTGGCAAGAGTTCTCTTCCTGTTGGTGGGGCAGCGAAGCGCTTAAAGCTCTCACTCGAAGCTGAAGAGCAGAAACCATCTGTGAATCATGATCAGCAGCATCCTCAATGCAGCAGTGGCAACAACATCAATTTCACTGCCATGCAGCCAGTTCATTCCATACCATGCGGGATTCCATACGATGCTGCAGCTGCCAACGCTTATTATCACAACCTCTTCCACCAATTTCAGCCAAACTACTATGGTGCTTTGGATTCTGCTGGACTAAACCCTAACATTGCAACTCAGATGAACATGATGCCGCAGCAGCCAGCTGAGTTTTACATTTGGCCTAATCACCAATCCCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003700 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009791 GO:0009888 GO:0009889 GO:0009956 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010074 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010492 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0048364 GO:0048507 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0060771 GO:0060772 GO:0060774 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

546

Amino Acids

60.22

Weight (kDa)

5.76

Isoelectric Point (pI)

55.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	364 - 413	1.8e-09	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001864)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G10510 AT5G65510 AT5G65510 AT5G65510 AT5G65510
fragaria_vesca	FvH4_1g19530
malus_domestica	MD01G1040700.v1.1 MD15G1310900.v1.1
prunus_persica	Prupe.6G142500_v2.0.a1 Prupe.6G203000_v2.0.a1
pyrus_communis	pycom01g06820 pycom15g27450
rosa_chinensis	RchiOBHm_Chr2g0111031 RchiOBHm_Chr4g0405741
rosa_laevigata	RLG00000012851 RLG00000017859 RLG00000020876
rosa_multiflora	Rmu_co8195526.1_g000001 Rmu_sc0000041.1_g000014 Rmu_sc0003994.1_g000004
rosa_roxburghii	Rroxscaffold_2G00132730 Rroxscaffold_5G00366230
rosa_rugosa	Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700 Rorug02G0170700
rosa_samantha	Rh2AG222800 Rh2AG222900 Rh2BG234800 Rh2CG226300 Rh2DG230600 Rh2DG230700 Rh2DG399700 Rh4BG037900 Rh4CG141400 Rh6BG125200 Rh6CG051000 Rh7CG223000
rosa_wichuraiana	Rw2G017210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	255, 578, 687
AccII	CGCG	3 cut(s)	101, 560, 617
AciI	CCGC	8 cut(s)	111, 393, 405, 560, 617, 1220, 1455, 1589
AcoI	YGGCCR	4 cut(s)	158, 724, 1149, 1221
AcsI	RAATTY	2 cut(s)	973, 1255
AcuI	CTGAAG	2 cut(s)	1209, 1371
AcyI	GRCGYC	2 cut(s)	509, 769
AfaI	GTAC	2 cut(s)	602, 954
AfeI	AGCGCT	1 cut(s)	1328
AfiI	CCNNNNNNNGG	5 cut(s)	153, 519, 765, 1171, 1313
AflIII	ACRYGT	1 cut(s)	99
AgsI	TTSAA	5 cut(s)	738, 973, 987, 1074, 1283
AhdI	GACNNNNNGTC	1 cut(s)	508
AjnI	CCWGG	3 cut(s)	435, 758, 1170
AjuI	GAANNNNNNNTTGG	2 cut(s)	1019, 1051
Alw21I	GWGCWC	2 cut(s)	392, 659
Alw26I	GTCTC	2 cut(s)	45, 341
Ama87I	CYCGRG	3 cut(s)	290, 484, 607
Aor51HI	AGCGCT	1 cut(s)	1328
ApoI	RAATTY	2 cut(s)	973, 1255
ArsI	GACNNNNNNTTYG	2 cut(s)	614, 646
AseI	ATTAAT	1 cut(s)	1242
AspLEI	GCGC	4 cut(s)	327, 551, 617, 1329
AspS9I	GGNCC	5 cut(s)	60, 202, 220, 517, 839
AsuC2I	CCSGG	3 cut(s)	520, 583, 1153
AsuHPI	GGTGA	5 cut(s)	209, 225, 237, 634, 1616
AvaI	CYCGRG	3 cut(s)	290, 484, 607
AvaII	GGWCC	3 cut(s)	60, 202, 839
BalI	TGGCCA	1 cut(s)	726
BanII	GRGCYC	3 cut(s)	392, 491, 659
Bbv12I	GWGCWC	2 cut(s)	392, 659
BccI	CCATC	3 cut(s)	313, 1119, 1372
BceAI	ACGGC	3 cut(s)	668, 712, 1128
BciT130I	CCWGG	3 cut(s)	437, 760, 1172
BciVI	GTATCC	1 cut(s)	773
BclI	TGATCA	2 cut(s)	664, 1378
BcnI	CCSGG	3 cut(s)	520, 583, 1153
BcoDI	GTCTC	2 cut(s)	45, 341
BfmI	CTRYAG	1 cut(s)	1473
BfoI	RGCGCY	1 cut(s)	1330
BfuI	GTATCC	1 cut(s)	773
BglII	AGATCT	1 cut(s)	442
BmcAI	AGTACT	1 cut(s)	954
Bme1390I	CCNGG	6 cut(s)	437, 520, 583, 760, 1153, 1172
Bme18I	GGWCC	3 cut(s)	60, 202, 839
BmeRI	GACNNNNNGTC	1 cut(s)	508
BmeT110I	CYCGRG	3 cut(s)	290, 484, 607
BmgT120I	GGNCC	5 cut(s)	60, 202, 220, 517, 839
BmiI	GGNNCC	3 cut(s)	6, 464, 840
BmrFI	CCNGG	6 cut(s)	437, 520, 583, 760, 1153, 1172
BmrI	ACTGGG	2 cut(s)	468, 844
BmsI	GCATC	4 cut(s)	1117, 1396, 1459, 1575
BmuI	ACTGGG	2 cut(s)	468, 844
BpuEI	CTTGAG	1 cut(s)	431
BpuMI	CCSGG	3 cut(s)	520, 583, 1153
Bsa29I	ATCGAT	1 cut(s)	317
BsaHI	GRCGYC	2 cut(s)	509, 769
BsaI	GGTCTC	1 cut(s)	341
BsaJI	CCNNGG	4 cut(s)	45, 352, 513, 1171
BsaWI	WCCGGW	1 cut(s)	227
BsaXI	ACNNNNNCTCC	4 cut(s)	89, 119, 374, 404
Bsc4I	CCNNNNNNNGG	5 cut(s)	153, 519, 765, 1171, 1313
Bse1I	ACTGG	5 cut(s)	223, 463, 839, 1008, 1436
Bse3DI	GCAATG	2 cut(s)	924, 1563
BseBI	CCWGG	3 cut(s)	437, 760, 1172
BseCI	ATCGAT	1 cut(s)	317
BseDI	CCNNGG	4 cut(s)	45, 352, 513, 1171
BseGI	GGATG	1 cut(s)	1387
BseLI	CCNNNNNNNGG	5 cut(s)	153, 519, 765, 1171, 1313
BseMI	GCAATG	2 cut(s)	924, 1563
BseMII	CTCAG	7 cut(s)	57, 542, 665, 992, 1063, 1586, 1593
BseNI	ACTGG	5 cut(s)	223, 463, 839, 1008, 1436
BseRI	GAGGAG	1 cut(s)	1092
BseYI	CCCAGC	1 cut(s)	273
Bsh1236I	CGCG	3 cut(s)	101, 560, 617
Bsh1285I	CGRYCG	1 cut(s)	582
BshVI	ATCGAT	1 cut(s)	317
BsiEI	CGRYCG	1 cut(s)	582
BsiHKAI	GWGCWC	2 cut(s)	392, 659
BsiHKCI	CYCGRG	3 cut(s)	290, 484, 607
BsiSI	CCGG	4 cut(s)	228, 520, 582, 1152
BslFI	GGGAC	1 cut(s)	74
BslI	CCNNNNNNNGG	5 cut(s)	153, 519, 765, 1171, 1313
BsmAI	GTCTC	2 cut(s)	45, 341
BsmFI	GGGAC	1 cut(s)	74
BsmI	GAATGC	1 cut(s)	628
Bso31I	GGTCTC	1 cut(s)	341
BsoBI	CYCGRG	3 cut(s)	290, 484, 607
Bsp1286I	GDGCHC	3 cut(s)	392, 491, 659
Bsp1407I	TGTACA	1 cut(s)	600
Bsp143I	GATC	4 cut(s)	73, 442, 664, 1378
Bsp19I	CCATGG	2 cut(s)	45, 513
BspACI	CCGC	8 cut(s)	111, 393, 405, 560, 617, 1220, 1455, 1589
BspCNI	CTCAG	7 cut(s)	58, 541, 664, 991, 1062, 1585, 1594
BspDI	ATCGAT	1 cut(s)	317
BspFNI	CGCG	3 cut(s)	101, 560, 617
BspHI	TCATGA	1 cut(s)	1375
BspLI	GGNNCC	3 cut(s)	6, 464, 840
BspMAI	CTGCAG	1 cut(s)	1477
BspQI	GCTCTTC	2 cut(s)	664, 1347
BspTNI	GGTCTC	1 cut(s)	341
BsrDI	GCAATG	2 cut(s)	924, 1563
BsrGI	TGTACA	1 cut(s)	600
BsrI	ACTGG	5 cut(s)	223, 463, 839, 1008, 1436
BssECI	CCNNGG	4 cut(s)	45, 352, 513, 1171
BssMI	GATC	4 cut(s)	73, 442, 664, 1378
BssNI	GRCGYC	2 cut(s)	509, 769
BssT1I	CCWWGG	3 cut(s)	45, 352, 513
Bst2UI	CCWGG	3 cut(s)	437, 760, 1172
Bst4CI	ACNGT	3 cut(s)	197, 249, 879
Bst6I	CTCTTC	5 cut(s)	664, 1185, 1308, 1347, 1508
BstACI	GRCGYC	2 cut(s)	509, 769
BstAUI	TGTACA	1 cut(s)	600
BstC8I	GCNNGC	7 cut(s)	13, 148, 212, 543, 547, 1131, 1599
BstDEI	CTNAG	9 cut(s)	66, 528, 651, 702, 956, 978, 1049, 1572, 1602
BstDSI	CCRYGG	2 cut(s)	45, 513
BstF5I	GGATG	1 cut(s)	1387
BstFNI	CGCG	3 cut(s)	101, 560, 617
BstH2I	RGCGCY	1 cut(s)	1330
BstHHI	GCGC	4 cut(s)	327, 551, 617, 1329
BstKTI	GATC	4 cut(s)	76, 445, 667, 1381
BstMAI	GTCTC	2 cut(s)	45, 341
BstMBI	GATC	4 cut(s)	73, 442, 664, 1378
BstMCI	CGRYCG	1 cut(s)	582
BstNI	CCWGG	3 cut(s)	437, 760, 1172
BstNSI	RCATGY	1 cut(s)	1022
BstSCI	CCNGG	6 cut(s)	435, 518, 581, 758, 1151, 1170
BstSFI	CTRYAG	1 cut(s)	1473
BstUI	CGCG	3 cut(s)	101, 560, 617
BstX2I	RGATCY	1 cut(s)	442
BstYI	RGATCY	1 cut(s)	442
Bsu15I	ATCGAT	1 cut(s)	317
BsuI	GTATCC	1 cut(s)	773
BsuTUI	ATCGAT	1 cut(s)	317
BtgI	CCRYGG	2 cut(s)	45, 513
BtgZI	GCGATG	1 cut(s)	1024
BtsCI	GGATG	1 cut(s)	1387
BtsI	GCAGTG	3 cut(s)	1069, 1408, 1422
BtsIMutI	CAGTG	3 cut(s)	1069, 1408, 1422
Cac8I	GCNNGC	7 cut(s)	13, 148, 212, 543, 547, 1131, 1599
CciI	TCATGA	1 cut(s)	1375
CfoI	GCGC	4 cut(s)	327, 551, 617, 1329
Cfr13I	GGNCC	5 cut(s)	60, 202, 220, 517, 839
ClaI	ATCGAT	1 cut(s)	317
CseI	GACGC	4 cut(s)	90, 107, 498, 758
Csp6I	GTAC	2 cut(s)	601, 953
CviAII	CATG	9 cut(s)	37, 46, 367, 514, 1019, 1376, 1429, 1452, 1582
CviQI	GTAC	2 cut(s)	601, 953
DdeI	CTNAG	9 cut(s)	66, 528, 651, 702, 956, 978, 1049, 1572, 1602
DpnI	GATC	4 cut(s)	75, 444, 666, 1380
DpnII	GATC	4 cut(s)	73, 442, 664, 1378
DriI	GACNNNNNGTC	1 cut(s)	508
EaeI	YGGCCR	4 cut(s)	158, 724, 1149, 1221
Eam1104I	CTCTTC	5 cut(s)	664, 1185, 1308, 1347, 1508
Eam1105I	GACNNNNNGTC	1 cut(s)	508
EarI	CTCTTC	5 cut(s)	664, 1185, 1308, 1347, 1508
EciI	GGCGGA	1 cut(s)	382
Ecl136II	GAGCTC	2 cut(s)	390, 657
Eco130I	CCWWGG	3 cut(s)	45, 352, 513
Eco24I	GRGCYC	3 cut(s)	392, 491, 659
Eco31I	GGTCTC	1 cut(s)	341
Eco47I	GGWCC	3 cut(s)	60, 202, 839
Eco47III	AGCGCT	1 cut(s)	1328
Eco53kI	GAGCTC	2 cut(s)	390, 657
Eco57I	CTGAAG	2 cut(s)	1209, 1371
Eco88I	CYCGRG	3 cut(s)	290, 484, 607
EcoICRI	GAGCTC	2 cut(s)	390, 657
EcoO109I	RGGNCCY	2 cut(s)	60, 839
EcoRI	GAATTC	1 cut(s)	973
EcoRII	CCWGG	3 cut(s)	435, 758, 1170
EcoT14I	CCWWGG	3 cut(s)	45, 352, 513
EcoT22I	ATGCAT	1 cut(s)	873
EcoT38I	GRGCYC	3 cut(s)	392, 491, 659
ErhI	CCWWGG	3 cut(s)	45, 352, 513
FaeI	CATG	9 cut(s)	40, 49, 370, 517, 1022, 1379, 1432, 1455, 1585
FalI	AAGNNNNNCTT	2 cut(s)	1066, 1098
FaqI	GGGAC	1 cut(s)	74
FatI	CATG	9 cut(s)	36, 45, 366, 513, 1018, 1375, 1428, 1451, 1581
FauI	CCCGC	2 cut(s)	553, 1448
FbaI	TGATCA	2 cut(s)	664, 1378
FblI	GTMKAC	3 cut(s)	255, 578, 687
FokI	GGATG	1 cut(s)	1374
FriOI	GRGCYC	3 cut(s)	392, 491, 659
GlaI	GCGC	4 cut(s)	326, 550, 616, 1328
GsaI	CCCAGC	1 cut(s)	277
HaeII	RGCGCY	1 cut(s)	1330
HapII	CCGG	4 cut(s)	228, 520, 582, 1152
HgaI	GACGC	4 cut(s)	90, 107, 498, 758
HhaI	GCGC	4 cut(s)	327, 551, 617, 1329
Hin1I	GRCGYC	2 cut(s)	509, 769
Hin1II	CATG	9 cut(s)	40, 49, 370, 517, 1022, 1379, 1432, 1455, 1585
Hin6I	GCGC	4 cut(s)	325, 549, 615, 1327
HinP1I	GCGC	4 cut(s)	325, 549, 615, 1327
HincII	GTYRAC	3 cut(s)	256, 579, 688
HindII	GTYRAC	3 cut(s)	256, 579, 688
HinfI	GANTC	9 cut(s)	68, 308, 370, 503, 526, 575, 1372, 1459, 1541
HpaII	CCGG	4 cut(s)	228, 520, 582, 1152
HphI	GGTGA	5 cut(s)	209, 225, 237, 634, 1616
Hpy166II	GTNNAC	6 cut(s)	233, 256, 579, 601, 688, 943
Hpy188III	TCNNGA	3 cut(s)	283, 1074, 1376
Hpy8I	GTNNAC	6 cut(s)	233, 256, 579, 601, 688, 943
Hpy99I	CGWCG	5 cut(s)	101, 257, 364, 689, 698
HpyAV	CCTTC	5 cut(s)	37, 94, 664, 757, 1047
HpyCH4III	ACNGT	3 cut(s)	197, 249, 879
HpyCH4IV	ACGT	1 cut(s)	1278
HpyCH4V	TGCA	9 cut(s)	848, 871, 917, 948, 1247, 1398, 1432, 1475, 1568
HpyF3I	CTNAG	9 cut(s)	66, 528, 651, 702, 956, 978, 1049, 1572, 1602
HpySE526I	ACGT	1 cut(s)	1278
Hsp92I	GRCGYC	2 cut(s)	509, 769
Hsp92II	CATG	9 cut(s)	40, 49, 370, 517, 1022, 1379, 1432, 1455, 1585
HspAI	GCGC	4 cut(s)	325, 549, 615, 1327
Ksp22I	TGATCA	2 cut(s)	664, 1378
Kzo9I	GATC	4 cut(s)	73, 442, 664, 1378
LguI	GCTCTTC	2 cut(s)	664, 1347
LmnI	GCTCC	3 cut(s)	10, 395, 1079
LweI	GCATC	4 cut(s)	1117, 1396, 1459, 1575
MaeII	ACGT	1 cut(s)	1278
MaeIII	GTNAC	5 cut(s)	243, 640, 1021, 1099, 1249
MalI	GATC	4 cut(s)	75, 444, 666, 1380
MboI	GATC	4 cut(s)	73, 442, 664, 1378
MboII	GAAGA	9 cut(s)	452, 651, 718, 803, 1019, 1202, 1295, 1364, 1495
MfeI	CAATTG	1 cut(s)	16
MflI	RGATCY	1 cut(s)	442
MhlI	GDGCHC	3 cut(s)	392, 491, 659
MlsI	TGGCCA	1 cut(s)	726
MluCI	AATT	8 cut(s)	16, 738, 882, 923, 973, 1255, 1417, 1511
MluI	ACGCGT	1 cut(s)	99
MluNI	TGGCCA	1 cut(s)	726
MlyI	GAGTC	5 cut(s)	77, 364, 497, 520, 584
Mox20I	TGGCCA	1 cut(s)	726
Mph1103I	ATGCAT	1 cut(s)	873
MscI	TGGCCA	1 cut(s)	726
MseI	TTAA	4 cut(s)	881, 1242, 1331, 1636
MslI	CAYNNNNRTG	2 cut(s)	50, 1427
Msp20I	TGGCCA	1 cut(s)	726
MspA1I	CMGCKG	2 cut(s)	1478, 1601
MspI	CCGG	4 cut(s)	228, 520, 582, 1152
MspR9I	CCNGG	6 cut(s)	437, 520, 583, 760, 1153, 1172
MunI	CAATTG	1 cut(s)	16
Mva1269I	GAATGC	1 cut(s)	628
MvaI	CCWGG	3 cut(s)	437, 760, 1172
MvnI	CGCG	3 cut(s)	101, 560, 617
NciI	CCSGG	3 cut(s)	520, 583, 1153
NcoI	CCATGG	2 cut(s)	45, 513
NdeII	GATC	4 cut(s)	73, 442, 664, 1378
NlaIII	CATG	9 cut(s)	40, 49, 370, 517, 1022, 1379, 1432, 1455, 1585
NlaIV	GGNNCC	3 cut(s)	6, 464, 840
NmeAIII	GCCGAG	3 cut(s)	282, 485, 577
NmuCI	GTSAC	3 cut(s)	243, 640, 1021
NsiI	ATGCAT	1 cut(s)	873
NspI	RCATGY	1 cut(s)	1022
PaeR7I	CTCGAG	2 cut(s)	290, 607
PagI	TCATGA	1 cut(s)	1375
PciSI	GCTCTTC	2 cut(s)	664, 1347
PcsI	WCGNNNNNNNCGW	2 cut(s)	93, 549
PctI	GAATGC	1 cut(s)	628
PfeI	GAWTC	4 cut(s)	308, 1372, 1459, 1541
PleI	GAGTC	5 cut(s)	76, 364, 497, 520, 583
PpsI	GAGTC	5 cut(s)	76, 364, 497, 520, 583
PpuMI	RGGWCCY	2 cut(s)	60, 839
PshBI	ATTAAT	1 cut(s)	1242
Psp124BI	GAGCTC	2 cut(s)	392, 659
Psp5II	RGGWCCY	2 cut(s)	60, 839
Psp6I	CCWGG	3 cut(s)	435, 758, 1170
PspFI	CCCAGC	1 cut(s)	273
PspGI	CCWGG	3 cut(s)	435, 758, 1170
PspN4I	GGNNCC	3 cut(s)	6, 464, 840
PspPI	GGNCC	5 cut(s)	60, 202, 220, 517, 839
PspPPI	RGGWCCY	2 cut(s)	60, 839
PspXI	VCTCGAGB	2 cut(s)	290, 607
PsrI	GAACNNNNNNTAC	2 cut(s)	1168, 1200
PstI	CTGCAG	1 cut(s)	1477
PsuI	RGATCY	1 cut(s)	442
PvuII	CAGCTG	2 cut(s)	1478, 1601
RsaI	GTAC	2 cut(s)	602, 954
RsaNI	GTAC	2 cut(s)	601, 953
RseI	CAYNNNNRTG	2 cut(s)	50, 1427
SacI	GAGCTC	2 cut(s)	392, 659
SalI	GTCGAC	3 cut(s)	254, 577, 686
SapI	GCTCTTC	2 cut(s)	664, 1347
SaqAI	TTAA	4 cut(s)	881, 1242, 1331, 1636
Sau3AI	GATC	4 cut(s)	73, 442, 664, 1378
Sau96I	GGNCC	5 cut(s)	60, 202, 220, 517, 839
ScaI	AGTACT	1 cut(s)	954
SchI	GAGTC	5 cut(s)	77, 364, 497, 520, 584
ScrFI	CCNGG	6 cut(s)	437, 520, 583, 760, 1153, 1172
SduI	GDGCHC	3 cut(s)	392, 491, 659
SfaNI	GCATC	4 cut(s)	1117, 1396, 1459, 1575
SfcI	CTRYAG	1 cut(s)	1473
Sfr274I	CTCGAG	2 cut(s)	290, 607
SinI	GGWCC	3 cut(s)	60, 202, 839
SlaI	CTCGAG	2 cut(s)	290, 607
SmiMI	CAYNNNNRTG	2 cut(s)	50, 1427
SmlI	CTYRAG	3 cut(s)	290, 446, 607
SmoI	CTYRAG	3 cut(s)	290, 446, 607
Sse9I	AATT	8 cut(s)	16, 738, 882, 923, 973, 1255, 1417, 1511
SsiI	CCGC	8 cut(s)	111, 393, 405, 560, 617, 1220, 1455, 1589
SspI	AATATT	1 cut(s)	902
SstI	GAGCTC	2 cut(s)	392, 659
StyD4I	CCNGG	6 cut(s)	435, 518, 581, 758, 1151, 1170
StyI	CCWWGG	3 cut(s)	45, 352, 513
TaaI	ACNGT	3 cut(s)	197, 249, 879
TaiI	ACGT	1 cut(s)	1281
TaqI	TCGA	9 cut(s)	132, 255, 291, 317, 476, 578, 608, 687, 1344
TasI	AATT	8 cut(s)	16, 738, 882, 923, 973, 1255, 1417, 1511
TatI	WGTACW	2 cut(s)	600, 952
TauI	GCSGC	4 cut(s)	408, 620, 1223, 1591
TfiI	GAWTC	4 cut(s)	308, 1372, 1459, 1541
Tru1I	TTAA	4 cut(s)	881, 1242, 1331, 1636
Tru9I	TTAA	4 cut(s)	881, 1242, 1331, 1636
TscAI	CASTG	3 cut(s)	1069, 1408, 1429
TseFI	GTSAC	3 cut(s)	243, 640, 1021
Tsp45I	GTSAC	3 cut(s)	243, 640, 1021
TspDTI	ATGAA	6 cut(s)	935, 1027, 1028, 1280, 1430, 1592
TspGWI	ACGGA	1 cut(s)	231
TspRI	CASTG	3 cut(s)	1069, 1408, 1429
VpaK11BI	GGWCC	3 cut(s)	60, 202, 839
VspI	ATTAAT	1 cut(s)	1242
XapI	RAATTY	2 cut(s)	973, 1255
XceI	RCATGY	1 cut(s)	1022
XcmI	CCANNNNNNNNNTGG	1 cut(s)	15
XhoI	CTCGAG	2 cut(s)	290, 607
XmiI	GTMKAC	3 cut(s)	255, 578, 687
ZrmI	AGTACT	1 cut(s)	954
Zsp2I	ATGCAT	1 cut(s)	873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.