pycom02g05450

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
3650619 .. 3654098
3480 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g05450.12

Sequence Viewer

Length: 1545 bp
ATGTTCAAAACCGCAGCTTCGCGCCTTAGGGCTCTCAAGGGGCGTACAAGTGCGTTCCATAGGGGAGTGGCCAGATTTTCAAGTTTGAATGATGTTGGAACGAAGCCATCCTCTTCCTCCTCTCCTTTCGGAGGTTTGTTTGGCTGGCTGATTGGGGGAAATTCCAGGTCTATGCCTCCATTAGACTTCCCTCTTTCAGGCATCAACCTCCCACCTGCATTGCCTGACCATGTTCAACCAGCGGATGTCAAAATTACAACTCTCCCGAATGGTATCAAAATAGCTTCTCTAAAGTCAGAGAAACCAGCTGCTTCAGTAGGTTTATATATTAATTGTGGTTCAGTCTATGAGACACTGGAATCATCTGGGGCCTCACACCTGCTGGAGCGTATGGCATTTAAGAGCACGAGGAACAGAAGCCATTTGCGTATTGTGCGGGAGGTGGAGGCTATTGGTGGTAACGTCCAAGCCTCAGCTTCTCGGGAGCAGATGGCTTACACCTTCAATGGTCTGAAGACCAATGTTCCTGAAATGGTAGAGCTGCTTATCGACTGTGTTCGGAACCCTGTTTTCCTAGATTGGGAAATTAATGAGGAGCTTCCTAAGGTGAAAAACGATATTAGTGAAGCCTCCAAAAACCCCGAAGCCCTTGTTTTGGAAGCAGTTCACTCTATTGGTTACAAGGGTGGCTTGGCCAATCCACTTTTAGCCCAGGAATCTTCAATTAGTAGGCTGAACAGTAATGTTTTGGAGCAATTTGTTGCTGAAAATTATACCGCTTCTCGAATGGTACTTGCAGCTTATGGTGTTGAACATGAGGAACTTCTAAAAATTGCAGAACCACTTTTGTCTGATCTTCCTAGTGTCCCTACTGCCGAGGAGCCAAAATCTGTGTATACTGGAGGTGATTACCGCTGTCAAGGTGATTTAGGGGAAACTCATTTTGCACTTGCCTTTGAACTTCCTGGTGGCTGGCGAAATGAGAAGGATGCAATGATTGTGAATGTTCTTCAGGTGCTAATGGGAGGAGGTGGCTCTTTTTCAGCCGGTGGACCTGGAAAAGGGATGCACTCACGTCTATATTCTCGTGTGTTAAATCGATGTTCAAAATTTCATTCGATTTTAGCATTCAGTAGTATCTACAACAATACTGGCAATTTTGGAATCCAAGCCTCCACTGCTCCAGATTTTGTCACAACAGCCATTGATATGGCAGCTAATGAGCTTATTGCAATCGCAACACCTGGAGATGTTGACCAGGTAGAACTAGATCGTGCTAAAAAGTCAACAAAGTCTTCCATTCTTATGAATTTGGAATCCAGAACGGTTGTTGCAGATGATATTGGGAGACAGATTCTGACGTACAATGACTGGAAGCTGAGCCAGCTCTTGAAGGCTGTGGATGAGGTTTCGTTAGAAGATATTGCTTCAATTGGTCAAAAGCTTTTATCTTCCCCTCTCACAATGGCAACATATGGAGATTTTACTAGCGCGACCGGCGTCCCAAGCTATGATTCAGTCAGCAAAAAGTTCCATTTAAAATGA

Protein Analysis

515

Amino Acids

55.48

Weight (kDa)

6.11

Isoelectric Point (pI)

33.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 223, 387
Acc36I ACCTGC 2 cut(s) 223, 387
AccI GTMKAC 1 cut(s) 896
AccII CGCG 2 cut(s) 22, 1493
AciI CCGC 5 cut(s) 12, 242, 436, 777, 913
AcoI YGGCCR 2 cut(s) 69, 693
AcsI RAATTY 3 cut(s) 160, 1109, 1309
AcuI CTGAAG 3 cut(s) 297, 533, 995
AcyI GRCGYC 1 cut(s) 1500
AfaI GTAC 3 cut(s) 46, 792, 1364
AfiI CCNNNNNNNGG 5 cut(s) 131, 197, 580, 655, 1061
AjiI CACGTC 1 cut(s) 1076
AjnI CCWGG 6 cut(s) 164, 711, 964, 1054, 1243, 1257
AjuI GAANNNNNNNTTGG 2 cut(s) 1498, 1530
Alw21I GWGCWC 1 cut(s) 407
Alw26I GTCTC 2 cut(s) 344, 1342
AlwNI CAGNNNCTG 1 cut(s) 1357
Ama87I CYCGRG 1 cut(s) 480
AoxI GGCC 3 cut(s) 69, 369, 693
ApeKI GCWGC 5 cut(s) 14, 308, 541, 797, 1214
ApoI RAATTY 3 cut(s) 160, 1109, 1309
AseI ATTAAT 2 cut(s) 330, 588
Asp700I GAANNNNTTC 1 cut(s) 663
AspLEI GCGC 2 cut(s) 24, 1493
AspS9I GGNCC 2 cut(s) 369, 1052
AsuHPI GGTGA 3 cut(s) 619, 917, 935
AvaI CYCGRG 1 cut(s) 480
AvaII GGWCC 1 cut(s) 1052
AxyI CCTNAGG 2 cut(s) 26, 603
BalI TGGCCA 2 cut(s) 71, 695
BanII GRGCYC 1 cut(s) 34
BauI CACGAG 2 cut(s) 406, 1086
BbsI GAAGAC 2 cut(s) 521, 1287
Bbv12I GWGCWC 1 cut(s) 407
BbvCI CCTCAGC 1 cut(s) 472
BbvI GCAGC 5 cut(s) 26, 295, 528, 809, 1226
BccI CCATC 2 cut(s) 115, 484
BciT130I CCWGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
BcoDI GTCTC 2 cut(s) 344, 1342
BfaI CTAG 4 cut(s) 575, 861, 1268, 1488
BfuAI ACCTGC 2 cut(s) 223, 387
BisI GCNGC 5 cut(s) 15, 309, 542, 798, 1215
BlpI GCTNAGC 1 cut(s) 1379
BlsI GCNGC 5 cut(s) 16, 310, 543, 799, 1216
Bme1390I CCNGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
Bme18I GGWCC 1 cut(s) 1052
BmeT110I CYCGRG 1 cut(s) 480
BmgBI CACGTC 1 cut(s) 1076
BmgT120I GGNCC 2 cut(s) 369, 1052
BmiI GGNNCC 3 cut(s) 370, 563, 882
BmrFI CCNGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
BmsI GCATC 3 cut(s) 210, 979, 1056
BoxI GACNNNNGTC 1 cut(s) 1499
BpiI GAAGAC 2 cut(s) 521, 1287
BpmI CTGGAG 4 cut(s) 404, 921, 1167, 1266
Bpu10I CCTNAGC 1 cut(s) 472
Bpu1102I GCTNAGC 1 cut(s) 1379
BpuEI CTTGAG 1 cut(s) 20
Bsa29I ATCGAT 1 cut(s) 1099
BsaHI GRCGYC 1 cut(s) 1500
BsaJI CCNNGG 2 cut(s) 711, 876
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 197, 580, 655, 1061
Bse118I RCCGGY 2 cut(s) 1046, 1496
Bse1I ACTGG 4 cut(s) 360, 904, 1156, 1376
Bse21I CCTNAGG 2 cut(s) 26, 603
Bse3DI GCAATG 2 cut(s) 218, 999
BseBI CCWGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
BseCI ATCGAT 1 cut(s) 1099
BseDI CCNNGG 2 cut(s) 711, 876
BseGI GGATG 5 cut(s) 107, 250, 994, 1071, 1408
BseLI CCNNNNNNNGG 5 cut(s) 131, 197, 580, 655, 1061
BseMI GCAATG 2 cut(s) 218, 999
BseMII CTCAG 2 cut(s) 486, 1370
BseNI ACTGG 4 cut(s) 360, 904, 1156, 1376
BseRI GAGGAG 4 cut(s) 109, 608, 893, 1041
BseXI GCAGC 5 cut(s) 26, 295, 528, 809, 1226
Bsh1236I CGCG 2 cut(s) 22, 1493
Bsh1285I CGRYCG 1 cut(s) 1497
BshFI GGCC 3 cut(s) 71, 371, 695
BshVI ATCGAT 1 cut(s) 1099
BsiEI CGRYCG 1 cut(s) 1497
BsiHKAI GWGCWC 1 cut(s) 407
BsiHKCI CYCGRG 1 cut(s) 480
BsiSI CCGG 2 cut(s) 1047, 1497
BslFI GGGAC 2 cut(s) 851, 1487
BslI CCNNNNNNNGG 5 cut(s) 131, 197, 580, 655, 1061
BsmAI GTCTC 2 cut(s) 344, 1342
BsmFI GGGAC 2 cut(s) 851, 1487
BsmI GAATGC 1 cut(s) 1127
BsnI GGCC 3 cut(s) 71, 371, 695
BsoBI CYCGRG 1 cut(s) 480
Bsp1286I GDGCHC 2 cut(s) 34, 407
Bsp143I GATC 2 cut(s) 853, 1270
Bsp1720I GCTNAGC 1 cut(s) 1379
BspACI CCGC 5 cut(s) 12, 242, 436, 777, 913
BspANI GGCC 3 cut(s) 71, 371, 695
BspCNI CTCAG 2 cut(s) 485, 1371
BspDI ATCGAT 1 cut(s) 1099
BspFNI CGCG 2 cut(s) 22, 1493
BspLI GGNNCC 3 cut(s) 370, 563, 882
BspMI ACCTGC 2 cut(s) 223, 387
BsrDI GCAATG 2 cut(s) 218, 999
BsrFI RCCGGY 2 cut(s) 1046, 1496
BsrI ACTGG 4 cut(s) 360, 904, 1156, 1376
BssAI RCCGGY 2 cut(s) 1046, 1496
BssECI CCNNGG 2 cut(s) 711, 876
BssMI GATC 2 cut(s) 853, 1270
BssNAI GTATAC 1 cut(s) 897
BssNI GRCGYC 1 cut(s) 1500
BssSI CACGAG 2 cut(s) 406, 1086
Bst1107I GTATAC 1 cut(s) 897
Bst2BI CACGAG 2 cut(s) 406, 1086
Bst2UI CCWGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
Bst4CI ACNGT 3 cut(s) 554, 740, 1327
Bst6I CTCTTC 1 cut(s) 118
BstACI GRCGYC 1 cut(s) 1500
BstC8I GCNNGC 3 cut(s) 146, 974, 1385
BstDEI CTNAG 4 cut(s) 26, 472, 603, 1379
BstENI CCTNNNNNAGG 3 cut(s) 129, 195, 1059
BstF5I GGATG 5 cut(s) 107, 250, 994, 1071, 1408
BstFNI CGCG 2 cut(s) 22, 1493
BstHHI GCGC 2 cut(s) 24, 1493
BstKTI GATC 2 cut(s) 856, 1273
BstMAI GTCTC 2 cut(s) 344, 1342
BstMBI GATC 2 cut(s) 853, 1270
BstMCI CGRYCG 1 cut(s) 1497
BstMWI GCNNNNNNNGC 5 cut(s) 433, 1178, 1384, 1497, 1506
BstNI CCWGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
BstPAI GACNNNNGTC 1 cut(s) 1499
BstSCI CCNGG 6 cut(s) 164, 711, 964, 1054, 1243, 1257
BstUI CGCG 2 cut(s) 22, 1493
BstV1I GCAGC 5 cut(s) 26, 295, 528, 809, 1226
BstV2I GAAGAC 2 cut(s) 521, 1287
BstXI CCANNNNNNTGG 1 cut(s) 1210
BstZ17I GTATAC 1 cut(s) 897
Bsu15I ATCGAT 1 cut(s) 1099
Bsu36I CCTNAGG 2 cut(s) 26, 603
BsuRI GGCC 3 cut(s) 71, 371, 695
BsuTUI ATCGAT 1 cut(s) 1099
BtrI CACGTC 1 cut(s) 1076
BtsCI GGATG 5 cut(s) 107, 250, 994, 1071, 1408
BtsI GCAGTG 1 cut(s) 1176
BtsIMutI CAGTG 2 cut(s) 353, 1176
BveI ACCTGC 2 cut(s) 223, 387
Cac8I GCNNGC 3 cut(s) 146, 974, 1385
CaiI CAGNNNCTG 1 cut(s) 1357
CfoI GCGC 2 cut(s) 24, 1493
Cfr10I RCCGGY 2 cut(s) 1046, 1496
Cfr13I GGNCC 2 cut(s) 369, 1052
ClaI ATCGAT 1 cut(s) 1099
CseI GACGC 1 cut(s) 1489
CsiI ACCWGGT 1 cut(s) 1257
Csp6I GTAC 3 cut(s) 45, 791, 1363
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 2 cut(s) 230, 815
CviQI GTAC 3 cut(s) 45, 791, 1363
DdeI CTNAG 4 cut(s) 26, 472, 603, 1379
DpnI GATC 2 cut(s) 855, 1272
DpnII GATC 2 cut(s) 853, 1270
DraI TTTAAA 1 cut(s) 1539
EaeI YGGCCR 2 cut(s) 69, 693
Eam1104I CTCTTC 1 cut(s) 118
EarI CTCTTC 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 1052
Eco57I CTGAAG 3 cut(s) 297, 533, 995
Eco81I CCTNAGG 2 cut(s) 26, 603
Eco88I CYCGRG 1 cut(s) 480
EcoNI CCTNNNNNAGG 3 cut(s) 129, 195, 1059
EcoO109I RGGNCCY 1 cut(s) 369
EcoRII CCWGG 6 cut(s) 164, 711, 964, 1054, 1243, 1257
EcoT38I GRGCYC 1 cut(s) 34
FaeI CATG 2 cut(s) 233, 818
FalI AAGNNNNNCTT 2 cut(s) 674, 706
FaqI GGGAC 2 cut(s) 851, 1487
FatI CATG 2 cut(s) 229, 814
FauI CCCGC 1 cut(s) 429
FauNDI CATATG 1 cut(s) 1474
FblI GTMKAC 1 cut(s) 896
Fnu4HI GCNGC 5 cut(s) 15, 309, 542, 798, 1215
FokI GGATG 5 cut(s) 94, 257, 1001, 1078, 1415
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 5 cut(s) 15, 309, 542, 798, 1215
FspBI CTAG 4 cut(s) 575, 861, 1268, 1488
GlaI GCGC 2 cut(s) 23, 1492
GluI GCNGC 5 cut(s) 15, 309, 542, 798, 1215
GsuI CTGGAG 4 cut(s) 404, 921, 1167, 1266
HaeIII GGCC 3 cut(s) 71, 371, 695
HapII CCGG 2 cut(s) 1047, 1497
HgaI GACGC 1 cut(s) 1489
HhaI GCGC 2 cut(s) 24, 1493
Hin1I GRCGYC 1 cut(s) 1500
Hin1II CATG 2 cut(s) 233, 818
Hin6I GCGC 2 cut(s) 22, 1491
HinP1I GCGC 2 cut(s) 22, 1491
HincII GTYRAC 2 cut(s) 1255, 1287
HindII GTYRAC 2 cut(s) 1255, 1287
HindIII AAGCTT 1 cut(s) 1442
HinfI GANTC 6 cut(s) 359, 716, 1164, 1316, 1354, 1514
HpaII CCGG 2 cut(s) 1047, 1497
HphI GGTGA 3 cut(s) 619, 917, 935
Hpy166II GTNNAC 5 cut(s) 667, 897, 1052, 1255, 1287
Hpy188I TCNGA 6 cut(s) 131, 298, 513, 561, 853, 1359
Hpy188III TCNNGA 7 cut(s) 265, 482, 527, 783, 1184, 1320, 1390
Hpy8I GTNNAC 5 cut(s) 667, 897, 1052, 1255, 1287
HpyAV CCTTC 3 cut(s) 511, 979, 1387
HpyCH4III ACNGT 3 cut(s) 554, 740, 1327
HpyCH4IV ACGT 3 cut(s) 462, 1075, 1361
HpyCH4V TGCA 8 cut(s) 218, 797, 836, 947, 992, 1069, 1232, 1334
HpyF10VI GCNNNNNNNGC 5 cut(s) 433, 1178, 1384, 1497, 1506
HpyF3I CTNAG 4 cut(s) 26, 472, 603, 1379
HpySE526I ACGT 3 cut(s) 462, 1075, 1361
Hsp92I GRCGYC 1 cut(s) 1500
Hsp92II CATG 2 cut(s) 233, 818
HspAI GCGC 2 cut(s) 22, 1491
Kzo9I GATC 2 cut(s) 853, 1270
LmnI GCTCC 6 cut(s) 385, 484, 595, 751, 880, 1186
Lsp1109I GCAGC 5 cut(s) 26, 295, 528, 809, 1226
LweI GCATC 3 cut(s) 210, 979, 1056
MabI ACCWGGT 1 cut(s) 1257
MaeI CTAG 4 cut(s) 575, 861, 1268, 1488
MaeII ACGT 3 cut(s) 462, 1075, 1361
MaeIII GTNAC 3 cut(s) 458, 677, 1192
MalI GATC 2 cut(s) 855, 1272
MboI GATC 2 cut(s) 853, 1270
MboII GAAGA 8 cut(s) 105, 526, 711, 848, 1001, 1287, 1430, 1443
MfeI CAATTG 1 cut(s) 1431
MhlI GDGCHC 2 cut(s) 34, 407
MlsI TGGCCA 2 cut(s) 71, 695
MluNI TGGCCA 2 cut(s) 71, 695
MmeI TCCRAC 1 cut(s) 76
Mox20I TGGCCA 2 cut(s) 71, 695
MroXI GAANNNNTTC 1 cut(s) 663
MscI TGGCCA 2 cut(s) 71, 695
MseI TTAA 5 cut(s) 330, 399, 588, 1094, 1538
MslI CAYNNNNRTG 2 cut(s) 1208, 1304
Msp20I TGGCCA 2 cut(s) 71, 695
MspA1I CMGCKG 3 cut(s) 242, 308, 915
MspI CCGG 2 cut(s) 1047, 1497
MspR9I CCNGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
MunI CAATTG 1 cut(s) 1431
Mva1269I GAATGC 1 cut(s) 1127
MvaI CCWGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
MvnI CGCG 2 cut(s) 22, 1493
MwoI GCNNNNNNNGC 5 cut(s) 433, 1178, 1384, 1497, 1506
NdeI CATATG 1 cut(s) 1474
NdeII GATC 2 cut(s) 853, 1270
NlaIII CATG 2 cut(s) 233, 818
NlaIV GGNNCC 3 cut(s) 370, 563, 882
NmeAIII GCCGAG 1 cut(s) 901
NmuCI GTSAC 1 cut(s) 1192
PaqCI CACCTGC 2 cut(s) 223, 387
PctI GAATGC 1 cut(s) 1127
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 6 cut(s) 359, 716, 1164, 1316, 1354, 1514
PkrI GCNGC 5 cut(s) 16, 310, 543, 799, 1216
PshAI GACNNNNGTC 1 cut(s) 1499
PshBI ATTAAT 2 cut(s) 330, 588
Psp6I CCWGG 6 cut(s) 164, 711, 964, 1054, 1243, 1257
PspGI CCWGG 6 cut(s) 164, 711, 964, 1054, 1243, 1257
PspN4I GGNNCC 3 cut(s) 370, 563, 882
PspPI GGNCC 2 cut(s) 369, 1052
PstNI CAGNNNCTG 1 cut(s) 1357
PvuII CAGCTG 1 cut(s) 308
RsaI GTAC 3 cut(s) 46, 792, 1364
RsaNI GTAC 3 cut(s) 45, 791, 1363
RseI CAYNNNNRTG 2 cut(s) 1208, 1304
SaqAI TTAA 5 cut(s) 330, 399, 588, 1094, 1538
SatI GCNGC 5 cut(s) 15, 309, 542, 798, 1215
Sau3AI GATC 2 cut(s) 853, 1270
Sau96I GGNCC 2 cut(s) 369, 1052
ScrFI CCNGG 6 cut(s) 166, 713, 966, 1056, 1245, 1259
SduI GDGCHC 2 cut(s) 34, 407
SexAI ACCWGGT 1 cut(s) 1257
SfaNI GCATC 3 cut(s) 210, 979, 1056
SinI GGWCC 1 cut(s) 1052
SmiMI CAYNNNNRTG 2 cut(s) 1208, 1304
SmlI CTYRAG 1 cut(s) 35
SmoI CTYRAG 1 cut(s) 35
SsiI CCGC 5 cut(s) 12, 242, 436, 777, 913
SspMI CTAG 4 cut(s) 575, 861, 1268, 1488
StyD4I CCNGG 6 cut(s) 164, 711, 964, 1054, 1243, 1257
TaaI ACNGT 3 cut(s) 554, 740, 1327
TaiI ACGT 3 cut(s) 465, 1078, 1364
TaqI TCGA 4 cut(s) 549, 784, 1099, 1118
TfiI GAWTC 6 cut(s) 359, 716, 1164, 1316, 1354, 1514
Tru1I TTAA 5 cut(s) 330, 399, 588, 1094, 1538
Tru9I TTAA 5 cut(s) 330, 399, 588, 1094, 1538
TscAI CASTG 2 cut(s) 360, 1183
TseFI GTSAC 1 cut(s) 1192
TseI GCWGC 5 cut(s) 14, 308, 541, 797, 1214
Tsp45I GTSAC 1 cut(s) 1192
TspDTI ATGAA 2 cut(s) 1103, 1322
TspRI CASTG 2 cut(s) 360, 1183
VpaK11BI GGWCC 1 cut(s) 1052
VspI ATTAAT 2 cut(s) 330, 588
XagI CCTNNNNNAGG 3 cut(s) 129, 195, 1059
XapI RAATTY 3 cut(s) 160, 1109, 1309
XmiI GTMKAC 1 cut(s) 896
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 4 cut(s) 575, 861, 1268, 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.