Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012897.1

Orthogroup ID

OG0002641

Physical Location & Seq

Genomic Coordinates Forward (+)

17098 .. 22322

Gene Structure 5225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012897.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

atgccaagtctcagagtaacagctttcagagatgcagccatgcagggtagcaaaatgggtggctcaaatgggaccatgctgggcggtggagtaggtagcctgaggggcttaatttcagcagaacatgctgaggtgcaggcttgcatgcatgagttcgggcttcaatcttccatcaccatgtacagaactgcagcttcgcgagtcaggtcgcttaagggccgtgtgggcgccaccaggtatgcgtcagtaactgcagctgctacaaagccagcctcagggggtatctttagctggctgactggggaaaagtccagtgctcttcctcgtctggaaaccccattagcaggtgtgaacctccctcctccactacctgattacgtggaaccaagcaagactaaggttacaaagctctccaatggtgtcagaatagcttcagaaaagtcaccgagtcctgcagcctccattggattatatgttaattgtggatccatttatgagactccagtaacaagtggggcttcacacttgttagaaaggctggcctttaagagtacaaccaaccgaagccacttgcgcattattagagaagtggaagcaattggtggtaacattggagccagtgcctctagggaacaaatgggatacacttttgatgctcttaaaacatatgttcctcagatggtggaattgcttgttgactctgtgagaaatcctgccttcttggaatgggaggtcaatgaggagctggaaaaggtgcgggcagaaattgctgacctttctaaaaatcctcaaggcttactcttggagaggattcattcggctggtttttctggagctttgagaaatcctcttttggcttctgaagacgcactgaacagattggatagcaacatccttgaggaatttgttgctgagaattatactgctcctcggatagttcttgcagcatctggggttgaccatgaggagcttttatctattgcagaaccacttctctcggacctaccaagtgtgccccttgttggcgagccaaaatctcaatatgttggaggggagtatcgtgctcaaggtgatacaaaggatgaggcacatgttgctcttgcttttgaagttcccggtggttggcgtgaagagaagcaagctatcattttgactgttctccagttgcttatgggaggaggtggctctttctctgccgggggtcctggaaaggggatgcactcaaggctatatctccgtgtcttgaataatcatcaggagattcaaaattttactgcattcaacagcctctttaatgattctggattgtttggaatttatgctagcactggctctgggtttgcatcacaggcagttgaaatagcagcaaaagagttactttcaattgccacacctggacaagtttcggatgtagagcttaaacgtgctaaagagtccacaaaggctgcagttttgatgaatctagaatctagaatgattgcatcagaagatataggaaggcaagttttgacatatggcgagaggaaacccgtggaggatttcttaaagacagtagaaggagtgactttgaaagatattactacagccgcccaacagattatatcttcacctctaacaatggcatcatatgggaatgttgttaatgtcccaagctacgattcagttaacagaatcttccatgcaaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005743 GO:0005746 GO:0005750 GO:0005758 GO:0005759 GO:0005773 GO:0005774 GO:0006508 GO:0006605 GO:0006626 GO:0006627 GO:0006807 GO:0006810 GO:0006839 GO:0006886 GO:0006950 GO:0006970 GO:0006996 GO:0007005 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0008270 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016485 GO:0016787 GO:0017076 GO:0019538 GO:0019866 GO:0019867 GO:0030554 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031970 GO:0031974 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0034982 GO:0035639 GO:0036094 GO:0042221 GO:0042886 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045184 GO:0045275 GO:0046872 GO:0046907 GO:0046914 GO:0050896 GO:0051179 GO:0051234 GO:0051604 GO:0051641 GO:0051649 GO:0070011 GO:0070013 GO:0070069 GO:0070469 GO:0070585 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072655 GO:0097159 GO:0097367 GO:0098588 GO:0098796 GO:0098798 GO:0098800 GO:0098803 GO:0098805 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M16 Peptidase_M16_C

Protein Analysis

562

Amino Acids

60.13

Weight (kDa)

6.02

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51980 AT1G51980 AT3G16480
fragaria_vesca	FvH4_1g06540 FvH4_1g06540 FvH4_1g06540 FvH4_6g32600 FvH4_6g32600
malus_domestica	MD02G1068800.v1.1 MD09G1200100.v1.1 MD17G1181200.v1.1
prunus_persica	Prupe.3G056700_v2.0.a1 Prupe.7G216900_v2.0.a1
pyrus_communis	pycom02g05450 pycom09g11770 pycom17g19060
rosa_chinensis	RchiOBHm_Chr2g0092291 RchiOBHm_Chr2g0141051
rosa_laevigata	RLG00000016294 RLG00000019911
rosa_multiflora	Rmu_co8416335.1_g000001 Rmu_sc0003289.1_g000021 Rmu_sc0004769.1_g000017 Rmu_sc0012897.1_g000005
rosa_roxburghii	Rroxscaffold_2G00104250 Rroxscaffold_2G00149290
rosa_rugosa	Rorug02G0024700 Rorug02G0366400
rosa_samantha	Rh2AG070400 Rh2AG417800 Rh2BG069900 Rh2BG427700 Rh2CG071100 Rh2CG356200 Rh2CG404100 Rh2DG068900 Rh2DG437200
rosa_wichuraiana	Rw2G006190 Rw2G034200 Rw2G034260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	335
Acc16I	TGCGCA	1 cut(s)	575
Acc36I	ACCTGC	1 cut(s)	335
AccB1I	GGYRCC	1 cut(s)	227
AccII	CGCG	1 cut(s)	199
AciI	CCGC	3 cut(s)	84, 757, 1587
AclWI	GGATC	2 cut(s)	480, 493
AcsI	RAATTY	3 cut(s)	902, 1267, 1314
AcuI	CTGAAG	2 cut(s)	417, 882
AcyI	GRCGYC	1 cut(s)	228
AfaI	GTAC	2 cut(s)	182, 553
AfiI	CCNNNNNNNGG	5 cut(s)	275, 344, 1022, 1122, 1211
AflII	CTTAAG	1 cut(s)	212
AflIII	ACRYGT	1 cut(s)	1090
AgsI	TTSAA	8 cut(s)	164, 1109, 1246, 1265, 1282, 1358, 1383, 1570
AjnI	CCWGG	3 cut(s)	233, 1204, 1393
AjuI	GAANNNNNNNTTGG	2 cut(s)	1642, 1674
Alw21I	GWGCWC	2 cut(s)	319, 1066
Alw26I	GTCTC	2 cut(s)	14, 491
AlwI	GGATC	2 cut(s)	480, 493
AlwNI	CAGNNNCTG	2 cut(s)	251, 950
AoxI	GGCC	2 cut(s)	217, 540
ApeKI	GCWGC	8 cut(s)	35, 191, 254, 257, 455, 944, 1364, 1445
ApoI	RAATTY	3 cut(s)	902, 1267, 1314
Asp700I	GAANNNNTTC	2 cut(s)	430, 990
AspLEI	GCGC	2 cut(s)	230, 576
AspS9I	GGNCC	4 cut(s)	72, 217, 1000, 1202
AsuC2I	CCSGG	2 cut(s)	1116, 1198
AsuHPI	GGTGA	4 cut(s)	166, 435, 1082, 1599
AsuNHI	GCTAGC	1 cut(s)	1322
AvaII	GGWCC	3 cut(s)	72, 1000, 1202
AxyI	CCTNAGG	2 cut(s)	101, 274
BaeGI	GKGCMC	1 cut(s)	1017
BamHI	GGATCC	1 cut(s)	485
BanI	GGYRCC	1 cut(s)	227
BbsI	GAAGAC	1 cut(s)	870
Bbv12I	GWGCWC	2 cut(s)	319, 1066
BbvCI	CCTCAGC	1 cut(s)	129
BbvI	GCAGC	8 cut(s)	47, 203, 244, 266, 467, 956, 1376, 1432
BccI	CCATC	2 cut(s)	179, 673
BceAI	ACGGC	1 cut(s)	204
BciT130I	CCWGG	3 cut(s)	235, 1206, 1395
BciVI	GTATCC	1 cut(s)	635
BcnI	CCSGG	2 cut(s)	1116, 1198
BcoDI	GTCTC	2 cut(s)	14, 491
BfaI	CTAG	4 cut(s)	627, 1323, 1463, 1470
BfmI	CTRYAG	5 cut(s)	189, 252, 453, 1446, 1581
BfoI	RGCGCY	1 cut(s)	231
BfrI	CTTAAG	1 cut(s)	212
BfuAI	ACCTGC	1 cut(s)	335
BfuI	GTATCC	1 cut(s)	635
BglI	GCCNNNNNGGC	2 cut(s)	105, 225
BisI	GCNGC	9 cut(s)	36, 192, 255, 258, 456, 945, 1365, 1446, 1587
BlsI	GCNGC	9 cut(s)	37, 193, 256, 259, 457, 946, 1366, 1447, 1588
Bme1390I	CCNGG	5 cut(s)	235, 1116, 1198, 1206, 1395
Bme18I	GGWCC	3 cut(s)	72, 1000, 1202
BmgT120I	GGNCC	4 cut(s)	72, 217, 1000, 1202
BmiI	GGNNCC	6 cut(s)	73, 229, 384, 487, 616, 1203
BmrFI	CCNGG	5 cut(s)	235, 1116, 1198, 1206, 1395
BmrI	ACTGGG	1 cut(s)	309
BmsI	GCATC	7 cut(s)	22, 643, 956, 1206, 1352, 1490, 1631
BmtI	GCTAGC	1 cut(s)	1326
BmuI	ACTGGG	1 cut(s)	309
BpiI	GAAGAC	1 cut(s)	870
BplI	GAGNNNNNCTC	2 cut(s)	832, 864
BpmI	CTGGAG	3 cut(s)	486, 852, 1145
Bpu10I	CCTNAGC	1 cut(s)	129
BpuEI	CTTGAG	4 cut(s)	774, 917, 1050, 1207
BpuMI	CCSGG	2 cut(s)	1116, 1198
BsaAI	YACGTR	1 cut(s)	379
BsaHI	GRCGYC	1 cut(s)	228
BsaJI	CCNNGG	3 cut(s)	929, 1197, 1530
Bsc4I	CCNNNNNNNGG	5 cut(s)	275, 344, 1022, 1122, 1211
Bse1I	ACTGG	6 cut(s)	304, 312, 503, 618, 1162, 1333
Bse21I	CCTNAGG	2 cut(s)	101, 274
BseBI	CCWGG	3 cut(s)	235, 1206, 1395
BseDI	CCNNGG	3 cut(s)	929, 1197, 1530
BseGI	GGATG	4 cut(s)	891, 1087, 1221, 1414
BseLI	CCNNNNNNNGG	5 cut(s)	275, 344, 1022, 1122, 1211
BseMII	CTCAG	6 cut(s)	25, 92, 120, 288, 689, 903
BseNI	ACTGG	6 cut(s)	304, 312, 503, 618, 1162, 1333
BseRI	GAGGAG	5 cut(s)	351, 755, 918, 980, 1191
BseSI	GKGCMC	1 cut(s)	1017
BseXI	GCAGC	8 cut(s)	47, 203, 244, 266, 467, 956, 1376, 1432
BseYI	CCCAGC	1 cut(s)	79
BsgI	GTGCAG	1 cut(s)	155
Bsh1236I	CGCG	1 cut(s)	199
BshFI	GGCC	2 cut(s)	219, 542
BshNI	GGYRCC	1 cut(s)	227
BsiHKAI	GWGCWC	2 cut(s)	319, 1066
BsiSI	CCGG	2 cut(s)	1116, 1197
BslFI	GGGAC	2 cut(s)	85, 1631
BslI	CCNNNNNNNGG	5 cut(s)	275, 344, 1022, 1122, 1211
BsmAI	GTCTC	2 cut(s)	14, 491
BsmFI	GGGAC	2 cut(s)	85, 1631
BsmI	GAATGC	1 cut(s)	1277
BsnI	GGCC	2 cut(s)	219, 542
Bsp1286I	GDGCHC	3 cut(s)	319, 1017, 1066
Bsp1407I	TGTACA	1 cut(s)	180
Bsp143I	GATC	1 cut(s)	485
Bsp68I	TCGCGA	1 cut(s)	199
BspACI	CCGC	3 cut(s)	84, 757, 1587
BspANI	GGCC	2 cut(s)	219, 542
BspCNI	CTCAG	6 cut(s)	24, 93, 121, 287, 688, 904
BspFNI	CGCG	1 cut(s)	199
BspLI	GGNNCC	6 cut(s)	73, 229, 384, 487, 616, 1203
BspMAI	CTGCAG	4 cut(s)	193, 256, 457, 1450
BspMI	ACCTGC	1 cut(s)	335
BspOI	GCTAGC	1 cut(s)	1326
BspPI	GGATC	2 cut(s)	480, 493
BspQI	GCTCTTC	1 cut(s)	324
BspT107I	GGYRCC	1 cut(s)	227
BspTI	CTTAAG	1 cut(s)	212
BsrGI	TGTACA	1 cut(s)	180
BsrI	ACTGG	6 cut(s)	304, 312, 503, 618, 1162, 1333
BssECI	CCNNGG	3 cut(s)	929, 1197, 1530
BssMI	GATC	1 cut(s)	485
BssNI	GRCGYC	1 cut(s)	228
Bst2UI	CCWGG	3 cut(s)	235, 1206, 1395
Bst4CI	ACNGT	2 cut(s)	1156, 1552
Bst6I	CTCTTC	2 cut(s)	324, 1125
BstACI	GRCGYC	1 cut(s)	228
BstAFI	CTTAAG	1 cut(s)	212
BstAPI	GCANNNNNTGC	3 cut(s)	125, 767, 1094
BstAUI	TGTACA	1 cut(s)	180
BstBAI	YACGTR	1 cut(s)	379
BstDEI	CTNAG	7 cut(s)	11, 101, 129, 274, 396, 675, 912
BstDSI	CCRYGG	1 cut(s)	1530
BstF5I	GGATG	4 cut(s)	891, 1087, 1221, 1414
BstFNI	CGCG	1 cut(s)	199
BstH2I	RGCGCY	1 cut(s)	231
BstHHI	GCGC	2 cut(s)	230, 576
BstKTI	GATC	1 cut(s)	488
BstMAI	GTCTC	2 cut(s)	14, 491
BstMBI	GATC	1 cut(s)	485
BstMWI	GCNNNNNNNGC	8 cut(s)	105, 125, 225, 573, 767, 1094, 1225, 1349
BstNI	CCWGG	3 cut(s)	235, 1206, 1395
BstNSI	RCATGY	3 cut(s)	128, 148, 1094
BstSCI	CCNGG	5 cut(s)	233, 1114, 1196, 1204, 1393
BstSFI	CTRYAG	5 cut(s)	189, 252, 453, 1446, 1581
BstSLI	GKGCMC	1 cut(s)	1017
BstUI	CGCG	1 cut(s)	199
BstV1I	GCAGC	8 cut(s)	47, 203, 244, 266, 467, 956, 1376, 1432
BstV2I	GAAGAC	1 cut(s)	870
BstX2I	RGATCY	1 cut(s)	485
BstYI	RGATCY	1 cut(s)	485
Bsu36I	CCTNAGG	2 cut(s)	101, 274
BsuI	GTATCC	1 cut(s)	635
BsuRI	GGCC	2 cut(s)	219, 542
BtgI	CCRYGG	1 cut(s)	1530
BtsCI	GGATG	4 cut(s)	891, 1087, 1221, 1414
BtsIMutI	CAGTG	4 cut(s)	319, 625, 869, 1326
BtuMI	TCGCGA	1 cut(s)	199
BveI	ACCTGC	1 cut(s)	335
CaiI	CAGNNNCTG	2 cut(s)	251, 950
CfoI	GCGC	2 cut(s)	230, 576
Cfr13I	GGNCC	4 cut(s)	72, 217, 1000, 1202
CseI	GACGC	2 cut(s)	231, 875
CsiI	ACCWGGT	1 cut(s)	233
Csp6I	GTAC	2 cut(s)	181, 552
CspCI	CAANNNNNGTGG	2 cut(s)	40, 75
CviAII	CATG	9 cut(s)	40, 76, 125, 145, 149, 178, 962, 1091, 1679
CviQI	GTAC	2 cut(s)	181, 552
DdeI	CTNAG	7 cut(s)	11, 101, 129, 274, 396, 675, 912
DinI	GGCGCC	1 cut(s)	229
DpnI	GATC	1 cut(s)	487
DpnII	GATC	1 cut(s)	485
Eam1104I	CTCTTC	2 cut(s)	324, 1125
EarI	CTCTTC	2 cut(s)	324, 1125
Eco47I	GGWCC	3 cut(s)	72, 1000, 1202
Eco57I	CTGAAG	2 cut(s)	417, 882
Eco81I	CCTNAGG	2 cut(s)	101, 274
EcoO109I	RGGNCCY	1 cut(s)	1202
EcoRII	CCWGG	3 cut(s)	233, 1204, 1393
EcoT22I	ATGCAT	1 cut(s)	150
EgeI	GGCGCC	1 cut(s)	229
EheI	GGCGCC	1 cut(s)	229
FaeI	CATG	9 cut(s)	43, 79, 128, 148, 152, 181, 965, 1094, 1682
FalI	AAGNNNNNCTT	4 cut(s)	502, 534, 1362, 1394
FaqI	GGGAC	2 cut(s)	85, 1631
FatI	CATG	9 cut(s)	39, 75, 124, 144, 148, 177, 961, 1090, 1678
FauI	CCCGC	1 cut(s)	750
FauNDI	CATATG	3 cut(s)	667, 1513, 1627
Fnu4HI	GCNGC	9 cut(s)	36, 192, 255, 258, 456, 945, 1365, 1446, 1587
FokI	GGATG	4 cut(s)	878, 1094, 1228, 1421
Fsp4HI	GCNGC	9 cut(s)	36, 192, 255, 258, 456, 945, 1365, 1446, 1587
FspBI	CTAG	4 cut(s)	627, 1323, 1463, 1470
FspI	TGCGCA	1 cut(s)	575
GlaI	GCGC	2 cut(s)	229, 575
GluI	GCNGC	9 cut(s)	36, 192, 255, 258, 456, 945, 1365, 1446, 1587
GsaI	CCCAGC	1 cut(s)	83
GsuI	CTGGAG	3 cut(s)	486, 852, 1145
HaeII	RGCGCY	1 cut(s)	231
HaeIII	GGCC	2 cut(s)	219, 542
HapII	CCGG	2 cut(s)	1116, 1197
HgaI	GACGC	2 cut(s)	231, 875
HhaI	GCGC	2 cut(s)	230, 576
Hin1I	GRCGYC	1 cut(s)	228
Hin1II	CATG	9 cut(s)	43, 79, 128, 148, 152, 181, 965, 1094, 1682
Hin6I	GCGC	2 cut(s)	228, 574
HinP1I	GCGC	2 cut(s)	228, 574
HincII	GTYRAC	3 cut(s)	697, 958, 1666
HindII	GTYRAC	3 cut(s)	697, 958, 1666
HpaI	GTTAAC	1 cut(s)	1666
HpaII	CCGG	2 cut(s)	1116, 1197
HphI	GGTGA	4 cut(s)	166, 435, 1082, 1599
Hpy166II	GTNNAC	5 cut(s)	352, 697, 958, 1437, 1666
Hpy188III	TCNNGA	8 cut(s)	198, 329, 831, 1243, 1256, 1302, 1463, 1470
Hpy8I	GTNNAC	5 cut(s)	352, 697, 958, 1437, 1666
HpyAV	CCTTC	3 cut(s)	727, 1491, 1550
HpyCH4III	ACNGT	2 cut(s)	1156, 1552
HpyCH4IV	ACGT	2 cut(s)	378, 1423
HpyF10VI	GCNNNNNNNGC	8 cut(s)	105, 125, 225, 573, 767, 1094, 1225, 1349
HpyF3I	CTNAG	7 cut(s)	11, 101, 129, 274, 396, 675, 912
HpySE526I	ACGT	2 cut(s)	378, 1423
Hsp92I	GRCGYC	1 cut(s)	228
Hsp92II	CATG	9 cut(s)	43, 79, 128, 148, 152, 181, 965, 1094, 1682
HspAI	GCGC	2 cut(s)	228, 574
KasI	GGCGCC	1 cut(s)	227
KspAI	GTTAAC	1 cut(s)	1666
Kzo9I	GATC	1 cut(s)	485
LguI	GCTCTTC	1 cut(s)	324
LmnI	GCTCC	5 cut(s)	614, 742, 833, 931, 967
Lsp1109I	GCAGC	8 cut(s)	47, 203, 244, 266, 467, 956, 1376, 1432
LweI	GCATC	7 cut(s)	22, 643, 956, 1206, 1352, 1490, 1631
MabI	ACCWGGT	1 cut(s)	233
MaeI	CTAG	4 cut(s)	627, 1323, 1463, 1470
MaeII	ACGT	2 cut(s)	378, 1423
MaeIII	GTNAC	8 cut(s)	16, 247, 400, 441, 505, 605, 1374, 1561
MalI	GATC	1 cut(s)	487
MboI	GATC	1 cut(s)	485
MboII	GAAGA	7 cut(s)	159, 311, 875, 1142, 1499, 1596, 1666
MfeI	CAATTG	2 cut(s)	597, 1383
MflI	RGATCY	1 cut(s)	485
MhlI	GDGCHC	3 cut(s)	319, 1017, 1066
Mly113I	GGCGCC	1 cut(s)	228
MlyI	GAGTC	5 cut(s)	210, 457, 493, 692, 1442
MmeI	TCCRAC	1 cut(s)	1027
Mph1103I	ATGCAT	1 cut(s)	150
MroXI	GAANNNNTTC	2 cut(s)	430, 990
MslI	CAYNNNNRTG	1 cut(s)	176
MspA1I	CMGCKG	1 cut(s)	257
MspCI	CTTAAG	1 cut(s)	212
MspI	CCGG	2 cut(s)	1116, 1197
MspR9I	CCNGG	5 cut(s)	235, 1116, 1198, 1206, 1395
MunI	CAATTG	2 cut(s)	597, 1383
Mva1269I	GAATGC	1 cut(s)	1277
MvaI	CCWGG	3 cut(s)	235, 1206, 1395
MvnI	CGCG	1 cut(s)	199
MwoI	GCNNNNNNNGC	8 cut(s)	105, 125, 225, 573, 767, 1094, 1225, 1349
NarI	GGCGCC	1 cut(s)	228
NciI	CCSGG	2 cut(s)	1116, 1198
NdeI	CATATG	3 cut(s)	667, 1513, 1627
NdeII	GATC	1 cut(s)	485
NheI	GCTAGC	1 cut(s)	1322
NlaIII	CATG	9 cut(s)	43, 79, 128, 148, 152, 181, 965, 1094, 1682
NlaIV	GGNNCC	6 cut(s)	73, 229, 384, 487, 616, 1203
NmuCI	GTSAC	2 cut(s)	441, 1561
NruI	TCGCGA	1 cut(s)	199
NsbI	TGCGCA	1 cut(s)	575
NsiI	ATGCAT	1 cut(s)	150
NspI	RCATGY	3 cut(s)	128, 148, 1094
PaeI	GCATGC	1 cut(s)	148
PaqCI	CACCTGC	1 cut(s)	335
PciI	ACATGT	1 cut(s)	1090
PciSI	GCTCTTC	1 cut(s)	324
PctI	GAATGC	1 cut(s)	1277
PdmI	GAANNNNTTC	2 cut(s)	430, 990
PfeI	GAWTC	7 cut(s)	811, 1261, 1298, 1459, 1466, 1658, 1671
PfoI	TCCNGGA	1 cut(s)	1204
PkrI	GCNGC	9 cut(s)	37, 193, 256, 259, 457, 946, 1366, 1447, 1588
PleI	GAGTC	5 cut(s)	209, 456, 493, 692, 1441
PluTI	GGCGCC	1 cut(s)	231
PpsI	GAGTC	5 cut(s)	209, 456, 493, 692, 1441
Ppu21I	YACGTR	1 cut(s)	379
PpuMI	RGGWCCY	1 cut(s)	1202
PscI	ACATGT	1 cut(s)	1090
Psp5II	RGGWCCY	1 cut(s)	1202
Psp6I	CCWGG	3 cut(s)	233, 1204, 1393
PspFI	CCCAGC	1 cut(s)	79
PspGI	CCWGG	3 cut(s)	233, 1204, 1393
PspN4I	GGNNCC	6 cut(s)	73, 229, 384, 487, 616, 1203
PspPI	GGNCC	4 cut(s)	72, 217, 1000, 1202
PspPPI	RGGWCCY	1 cut(s)	1202
PstI	CTGCAG	4 cut(s)	193, 256, 457, 1450
PstNI	CAGNNNCTG	2 cut(s)	251, 950
PsuI	RGATCY	1 cut(s)	485
PvuII	CAGCTG	1 cut(s)	257
RruI	TCGCGA	1 cut(s)	199
RsaI	GTAC	2 cut(s)	182, 553
RsaNI	GTAC	2 cut(s)	181, 552
RseI	CAYNNNNRTG	1 cut(s)	176
SapI	GCTCTTC	1 cut(s)	324
SatI	GCNGC	9 cut(s)	36, 192, 255, 258, 456, 945, 1365, 1446, 1587
Sau3AI	GATC	1 cut(s)	485
Sau96I	GGNCC	4 cut(s)	72, 217, 1000, 1202
SchI	GAGTC	5 cut(s)	210, 457, 493, 692, 1442
ScrFI	CCNGG	5 cut(s)	235, 1116, 1198, 1206, 1395
SduI	GDGCHC	3 cut(s)	319, 1017, 1066
SexAI	ACCWGGT	1 cut(s)	233
SfaNI	GCATC	7 cut(s)	22, 643, 956, 1206, 1352, 1490, 1631
SfcI	CTRYAG	5 cut(s)	189, 252, 453, 1446, 1581
SfoI	GGCGCC	1 cut(s)	229
SinI	GGWCC	3 cut(s)	72, 1000, 1202
SmiMI	CAYNNNNRTG	1 cut(s)	176
SmlI	CTYRAG	5 cut(s)	212, 789, 896, 1065, 1222
SmoI	CTYRAG	5 cut(s)	212, 789, 896, 1065, 1222
SphI	GCATGC	1 cut(s)	148
SsiI	CCGC	3 cut(s)	84, 757, 1587
SspDI	GGCGCC	1 cut(s)	227
SspMI	CTAG	4 cut(s)	627, 1323, 1463, 1470
StyD4I	CCNGG	5 cut(s)	233, 1114, 1196, 1204, 1393
TaaI	ACNGT	2 cut(s)	1156, 1552
TaiI	ACGT	2 cut(s)	381, 1426
TatI	WGTACW	2 cut(s)	180, 551
TauI	GCSGC	1 cut(s)	1589
TfiI	GAWTC	7 cut(s)	811, 1261, 1298, 1459, 1466, 1658, 1671
TscAI	CASTG	4 cut(s)	319, 625, 876, 1333
TseFI	GTSAC	2 cut(s)	441, 1561
TseI	GCWGC	8 cut(s)	35, 191, 254, 257, 455, 944, 1364, 1445
Tsp45I	GTSAC	2 cut(s)	441, 1561
TspDTI	ATGAA	2 cut(s)	803, 1472
TspGWI	ACGGA	1 cut(s)	1226
TspRI	CASTG	4 cut(s)	319, 625, 876, 1333
Vha464I	CTTAAG	1 cut(s)	212
VpaK11BI	GGWCC	3 cut(s)	72, 1000, 1202
XapI	RAATTY	3 cut(s)	902, 1267, 1314
XbaI	TCTAGA	2 cut(s)	1462, 1469
XceI	RCATGY	3 cut(s)	128, 148, 1094
XmnI	GAANNNNTTC	2 cut(s)	430, 990
XspI	CTAG	4 cut(s)	627, 1323, 1463, 1470
Zsp2I	ATGCAT	1 cut(s)	150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.