RLG00000016294

Belongs to the peptidase M16 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
5456920 .. 5461186
4267 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016294

Sequence Viewer

Length: 1545 bp
ATGTACAAGACCGCCGCCTCACGCCTCAGGGCTCTCAAGGGCCGGACAGGCAGTAGGGGAGTGGCTAGATTTTCAACATTGGGTGAACTTTCGAGTCCGGCTGCCACCGCCACGAAGCCTGCTTGGTCTCCTTTGGGTGGTTTATTTGGTTGGCTGACCGGAGGACGGTCCAGGTCTATGCCTCCACTGGACTTCCCACTTGAAGGTGTTAAGTTTCCACCTGCATTGCCGGATTACGTTCAGCCGGAGAAGCCTAAGATTACGACTCTGCCCAATGGTGTCAAAATAGCCTCTGTGAAGTCAGATGTACCTACAGCTTCCATAGGTTTATATGTTAATTGTGGTTCAGTCTATGAGACAGCAGAGTCATCTGGAGCATCACACCTGCTGGAGCGTATGGCTTTCAAGAGCACGAGAAACCGCAGTCATTTGCGTATTGTGCGGGAGGTGGAGGCGATTGGTGGCAATGTGCAAGCATCAGCCTCTCGGGAGCAGATGAGTTACACCATTAGTTCTCTGAAGACTTATGTTCCTGAAATGGTAGAGCTGCTTCTTGACTCGGTTCGGAATCCTGTTTTCCTTGATTGGGAAGTGAATGAGGAGCTTCTCAGGGTGAAAGATGATATTAATGAAGCCTCCAAAAACCCTGAAGCCCTTGTTTTGGAAGCAGTTCACTCTGTTGGTTACAAGGGTGGATTGGCGAATCCACTCTTAGCCCAAGAATCTTCGATTAGTAGACTAGATAGTGAAATTTTGGAGGAATTCGTTGCCGAAAATTATACTGCTCCTAGGATGGTGCTGGCCGCCTATGGTGTTGAACATGAGGAACTTCTAAAAATTGCAGAACCACTTTTGTCTGATCTCCCCAGTGTCCCTCTTGCTGAGGAGCCAACATCTATGTATATTGGAGGTGACTACCGTTGTCAAGCTGAATCAGGGGATACTCATTTTGCTTTTGCATTTGAACTTCCTGGTGGATGGCTTAGGATGAAGGATGCAATGATTTTGAATGTTCTTCAGATGCTAATGGGAGGAGGTGAATCCTTTTCAACTGGCGGACCTGGAAAAGGGATGAACTCGCGATTATATATTCGTGTGTTGGCTCAAAATCCCGAGGTTAAGACAATGTCAGCAATCAATAGCATCTACAACAATAGTGCTTTATTTGGCATCCAAGCTTCCACTAGTTCAGATTATGTGACAGAAGCCATTGATATAGCAGCAGATGAGCTTATTGCACTTGCAACACCTGGAGAAGTTGACCTGGTACAGCTAGATCGTGCTAAACAGTCAACGAAGTCTTCCATTCTTATGAATTTGGAATCTAGAATGATTGTTGTAGACGATATTGGGAGACAAATCCTGACGTACAATGAATGGAAATTGGAGCAGCTCATGAAGGCTGTAGATGAGGTTTCTTTGGAGGATATTACTTCAACTGCTCAAAAGCTTTTATCGACCCCTCTTACAATGGCATCATATGGAGATGTCACTAAAGTCCCACGCTATGATTCAGTCAGCCAAAGATTTTCCCTCTCAAAGTAA

Protein Analysis

515

Amino Acids

56.01

Weight (kDa)

5.13

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M16 PF00675 96 - 239 1.3e-41 Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 248 - 430 8.9e-25 Peptidase M16 inactive domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 229, 393
AasI GACNNNNNNGTC 1 cut(s) 364
Acc36I ACCTGC 2 cut(s) 229, 393
AccI GTMKAC 2 cut(s) 736, 1341
AccII CGCG 1 cut(s) 1081
AciI CCGC 7 cut(s) 12, 15, 108, 421, 442, 804, 1056
AcoI YGGCCR 1 cut(s) 801
AcsI RAATTY 3 cut(s) 750, 761, 1315
AcuI CTGAAG 3 cut(s) 539, 669, 1001
AfaI GTAC 4 cut(s) 5, 309, 1269, 1370
AfiI CCNNNNNNNGG 6 cut(s) 137, 165, 203, 586, 661, 1067
AgsI TTSAA 8 cut(s) 75, 203, 406, 818, 965, 1009, 1050, 1437
AhlI ACTAGT 1 cut(s) 1184
AjnI CCWGG 5 cut(s) 170, 970, 1060, 1249, 1263
AluBI AGCT 9 cut(s) 317, 547, 604, 929, 1178, 1231, 1273, 1393, 1450
AluI AGCT 9 cut(s) 317, 547, 604, 929, 1178, 1231, 1273, 1393, 1450
Alw21I GWGCWC 1 cut(s) 413
Alw26I GTCTC 3 cut(s) 132, 350, 1348
Ama87I CYCGRG 2 cut(s) 486, 1112
AoxI GGCC 2 cut(s) 40, 801
ApeKI GCWGC 4 cut(s) 101, 547, 1220, 1390
ApoI RAATTY 3 cut(s) 750, 761, 1315
AseI ATTAAT 1 cut(s) 627
Asp700I GAANNNNTTC 1 cut(s) 669
AspA2I CCTAGG 1 cut(s) 788
AspS9I GGNCC 3 cut(s) 40, 168, 1058
AsuHPI GGTGA 4 cut(s) 95, 625, 923, 1049
AvaI CYCGRG 2 cut(s) 486, 1112
AvaII GGWCC 2 cut(s) 168, 1058
AvrII CCTAGG 1 cut(s) 788
AxyI CCTNAGG 1 cut(s) 26
BanII GRGCYC 1 cut(s) 34
BarI GAAGNNNNNNTAC 2 cut(s) 534, 566
BauI CACGAG 1 cut(s) 412
BbsI GAAGAC 2 cut(s) 527, 1293
Bbv12I GWGCWC 1 cut(s) 413
BbvCI CCTCAGC 1 cut(s) 882
BbvI GCAGC 4 cut(s) 88, 534, 1232, 1402
BccI CCATC 2 cut(s) 787, 972
BciT130I CCWGG 5 cut(s) 172, 972, 1062, 1251, 1265
BciVI GTATCC 1 cut(s) 934
BcoDI GTCTC 3 cut(s) 132, 350, 1348
BcuI ACTAGT 1 cut(s) 1184
BfaI CTAG 6 cut(s) 66, 740, 789, 1185, 1274, 1326
BfmI CTRYAG 2 cut(s) 312, 1404
BfuAI ACCTGC 2 cut(s) 229, 393
BfuI GTATCC 1 cut(s) 934
BglI GCCNNNNNGGC 1 cut(s) 48
BisI GCNGC 6 cut(s) 15, 102, 548, 804, 1221, 1391
BlnI CCTAGG 1 cut(s) 788
BlsI GCNGC 6 cut(s) 16, 103, 549, 805, 1222, 1392
Bme1390I CCNGG 5 cut(s) 172, 972, 1062, 1251, 1265
Bme18I GGWCC 2 cut(s) 168, 1058
BmeT110I CYCGRG 2 cut(s) 486, 1112
BmgT120I GGNCC 3 cut(s) 40, 168, 1058
BmiI GGNNCC 1 cut(s) 888
BmrFI CCNGG 5 cut(s) 172, 972, 1062, 1251, 1265
BmrI ACTGGG 1 cut(s) 861
BmsI GCATC 7 cut(s) 386, 485, 985, 1011, 1152, 1179, 1484
BmuI ACTGGG 1 cut(s) 861
BpiI GAAGAC 2 cut(s) 527, 1293
BpmI CTGGAG 3 cut(s) 393, 410, 1272
Bpu10I CCTNAGC 2 cut(s) 882, 983
BpuEI CTTGAG 1 cut(s) 20
BsaI GGTCTC 1 cut(s) 132
BsaJI CCNNGG 2 cut(s) 788, 1113
BsaWI WCCGGW 1 cut(s) 158
Bsc4I CCNNNNNNNGG 6 cut(s) 137, 165, 203, 586, 661, 1067
Bse1I ACTGG 3 cut(s) 192, 867, 1057
Bse21I CCTNAGG 1 cut(s) 26
Bse3DI GCAATG 3 cut(s) 224, 472, 1005
BseBI CCWGG 5 cut(s) 172, 972, 1062, 1251, 1265
BseDI CCNNGG 2 cut(s) 788, 1113
BseGI GGATG 6 cut(s) 798, 983, 993, 1000, 1077, 1170
BseLI CCNNNNNNNGG 6 cut(s) 137, 165, 203, 586, 661, 1067
BseMI GCAATG 3 cut(s) 224, 472, 1005
BseMII CTCAG 3 cut(s) 40, 622, 873
BseNI ACTGG 3 cut(s) 192, 867, 1057
BseRI GAGGAG 3 cut(s) 614, 899, 1047
BseXI GCAGC 4 cut(s) 88, 534, 1232, 1402
Bsh1236I CGCG 1 cut(s) 1081
BshFI GGCC 2 cut(s) 42, 803
BsiHKAI GWGCWC 1 cut(s) 413
BsiHKCI CYCGRG 2 cut(s) 486, 1112
BsiSI CCGG 5 cut(s) 43, 98, 159, 230, 245
BslFI GGGAC 2 cut(s) 857, 1484
BslI CCNNNNNNNGG 6 cut(s) 137, 165, 203, 586, 661, 1067
BsmAI GTCTC 3 cut(s) 132, 350, 1348
BsmFI GGGAC 2 cut(s) 857, 1484
BsnI GGCC 2 cut(s) 42, 803
Bso31I GGTCTC 1 cut(s) 132
BsoBI CYCGRG 2 cut(s) 486, 1112
Bsp1286I GDGCHC 2 cut(s) 34, 413
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 2 cut(s) 859, 1276
Bsp68I TCGCGA 1 cut(s) 1081
BspACI CCGC 7 cut(s) 12, 15, 108, 421, 442, 804, 1056
BspANI GGCC 2 cut(s) 42, 803
BspCNI CTCAG 3 cut(s) 39, 621, 874
BspFNI CGCG 1 cut(s) 1081
BspHI TCATGA 1 cut(s) 1395
BspLI GGNNCC 1 cut(s) 888
BspMI ACCTGC 2 cut(s) 229, 393
BspTNI GGTCTC 1 cut(s) 132
BsrDI GCAATG 3 cut(s) 224, 472, 1005
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 3 cut(s) 192, 867, 1057
BssECI CCNNGG 2 cut(s) 788, 1113
BssMI GATC 2 cut(s) 859, 1276
BssSI CACGAG 1 cut(s) 412
BssT1I CCWWGG 1 cut(s) 788
Bst2BI CACGAG 1 cut(s) 412
Bst2UI CCWGG 5 cut(s) 172, 972, 1062, 1251, 1265
Bst4CI ACNGT 3 cut(s) 168, 920, 1290
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 3 cut(s) 120, 474, 801
BstDEI CTNAG 6 cut(s) 26, 255, 608, 712, 882, 983
BstENI CCTNNNNNAGG 1 cut(s) 1065
BstF5I GGATG 6 cut(s) 798, 983, 993, 1000, 1077, 1170
BstFNI CGCG 1 cut(s) 1081
BstKTI GATC 2 cut(s) 862, 1279
BstMAI GTCTC 3 cut(s) 132, 350, 1348
BstMBI GATC 2 cut(s) 859, 1276
BstMWI GCNNNNNNNGC 4 cut(s) 48, 107, 250, 439
BstNI CCWGG 5 cut(s) 172, 972, 1062, 1251, 1265
BstSCI CCNGG 5 cut(s) 170, 970, 1060, 1249, 1263
BstSFI CTRYAG 2 cut(s) 312, 1404
BstUI CGCG 1 cut(s) 1081
BstV1I GCAGC 4 cut(s) 88, 534, 1232, 1402
BstV2I GAAGAC 2 cut(s) 527, 1293
Bsu36I CCTNAGG 1 cut(s) 26
BsuI GTATCC 1 cut(s) 934
BsuRI GGCC 2 cut(s) 42, 803
BtsCI GGATG 6 cut(s) 798, 983, 993, 1000, 1077, 1170
BtsIMutI CAGTG 2 cut(s) 185, 874
BtuMI TCGCGA 1 cut(s) 1081
BveI ACCTGC 2 cut(s) 229, 393
Cac8I GCNNGC 3 cut(s) 120, 474, 801
CciI TCATGA 1 cut(s) 1395
Cfr13I GGNCC 3 cut(s) 40, 168, 1058
CsiI ACCWGGT 1 cut(s) 1263
Csp6I GTAC 4 cut(s) 4, 308, 1268, 1369
CspCI CAANNNNNGTGG 2 cut(s) 207, 242
CviAII CATG 2 cut(s) 821, 1396
CviQI GTAC 4 cut(s) 4, 308, 1268, 1369
DdeI CTNAG 6 cut(s) 26, 255, 608, 712, 882, 983
DpnI GATC 2 cut(s) 861, 1278
DpnII GATC 2 cut(s) 859, 1276
DrdI GACNNNNNNGTC 1 cut(s) 364
DseDI GACNNNNNNGTC 1 cut(s) 364
EaeI YGGCCR 1 cut(s) 801
EciI GGCGGA 1 cut(s) 1071
Eco130I CCWWGG 1 cut(s) 788
Eco24I GRGCYC 1 cut(s) 34
Eco31I GGTCTC 1 cut(s) 132
Eco47I GGWCC 2 cut(s) 168, 1058
Eco57I CTGAAG 3 cut(s) 539, 669, 1001
Eco81I CCTNAGG 1 cut(s) 26
Eco88I CYCGRG 2 cut(s) 486, 1112
EcoNI CCTNNNNNAGG 1 cut(s) 1065
EcoRI GAATTC 1 cut(s) 761
EcoRII CCWGG 5 cut(s) 170, 970, 1060, 1249, 1263
EcoT14I CCWWGG 1 cut(s) 788
EcoT38I GRGCYC 1 cut(s) 34
ErhI CCWWGG 1 cut(s) 788
FaeI CATG 2 cut(s) 824, 1399
FaqI GGGAC 2 cut(s) 857, 1484
FatI CATG 2 cut(s) 820, 1395
FauI CCCGC 1 cut(s) 435
FauNDI CATATG 1 cut(s) 1480
FblI GTMKAC 2 cut(s) 736, 1341
Fnu4HI GCNGC 6 cut(s) 15, 102, 548, 804, 1221, 1391
FokI GGATG 6 cut(s) 805, 990, 1000, 1007, 1084, 1157
FriOI GRGCYC 1 cut(s) 34
Fsp4HI GCNGC 6 cut(s) 15, 102, 548, 804, 1221, 1391
FspBI CTAG 6 cut(s) 66, 740, 789, 1185, 1274, 1326
GluI GCNGC 6 cut(s) 15, 102, 548, 804, 1221, 1391
GsuI CTGGAG 3 cut(s) 393, 410, 1272
HaeIII GGCC 2 cut(s) 42, 803
HapII CCGG 5 cut(s) 43, 98, 159, 230, 245
Hin1II CATG 2 cut(s) 824, 1399
HincII GTYRAC 2 cut(s) 1261, 1293
HindII GTYRAC 2 cut(s) 1261, 1293
HindIII AAGCTT 2 cut(s) 1176, 1448
HpaII CCGG 5 cut(s) 43, 98, 159, 230, 245
HphI GGTGA 4 cut(s) 95, 625, 923, 1049
Hpy166II GTNNAC 6 cut(s) 86, 673, 737, 1261, 1293, 1342
Hpy188I TCNGA 6 cut(s) 304, 519, 567, 859, 1020, 1192
Hpy8I GTNNAC 6 cut(s) 86, 673, 737, 1261, 1293, 1342
HpyAV CCTTC 3 cut(s) 197, 985, 1393
HpyCH4III ACNGT 3 cut(s) 168, 920, 1290
HpyCH4IV ACGT 2 cut(s) 237, 1367
HpyCH4V TGCA 7 cut(s) 224, 472, 842, 959, 998, 1238, 1244
HpyF10VI GCNNNNNNNGC 4 cut(s) 48, 107, 250, 439
HpyF3I CTNAG 6 cut(s) 26, 255, 608, 712, 882, 983
HpySE526I ACGT 2 cut(s) 237, 1367
Hsp92II CATG 2 cut(s) 824, 1399
Kzo9I GATC 2 cut(s) 859, 1276
LmnI GCTCC 7 cut(s) 374, 391, 490, 601, 790, 886, 1387
Lsp1109I GCAGC 4 cut(s) 88, 534, 1232, 1402
LweI GCATC 7 cut(s) 386, 485, 985, 1011, 1152, 1179, 1484
MabI ACCWGGT 1 cut(s) 1263
MaeI CTAG 6 cut(s) 66, 740, 789, 1185, 1274, 1326
MaeII ACGT 2 cut(s) 237, 1367
MaeIII GTNAC 5 cut(s) 500, 683, 911, 1198, 1489
MalI GATC 2 cut(s) 861, 1278
MboI GATC 2 cut(s) 859, 1276
MboII GAAGA 4 cut(s) 532, 717, 1007, 1293
MhlI GDGCHC 2 cut(s) 34, 413
MluCI AATT 7 cut(s) 337, 750, 761, 775, 837, 1315, 1382
MlyI GAGTC 4 cut(s) 103, 259, 374, 551
MroXI GAANNNNTTC 1 cut(s) 669
MseI TTAA 4 cut(s) 210, 336, 627, 1119
MslI CAYNNNNRTG 1 cut(s) 1310
MspI CCGG 5 cut(s) 43, 98, 159, 230, 245
MspR9I CCNGG 5 cut(s) 172, 972, 1062, 1251, 1265
MvaI CCWGG 5 cut(s) 172, 972, 1062, 1251, 1265
MvnI CGCG 1 cut(s) 1081
MwoI GCNNNNNNNGC 4 cut(s) 48, 107, 250, 439
NdeI CATATG 1 cut(s) 1480
NdeII GATC 2 cut(s) 859, 1276
NlaIII CATG 2 cut(s) 824, 1399
NlaIV GGNNCC 1 cut(s) 888
NmuCI GTSAC 3 cut(s) 911, 1198, 1489
NruI TCGCGA 1 cut(s) 1081
PagI TCATGA 1 cut(s) 1395
PaqCI CACCTGC 2 cut(s) 229, 393
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 7 cut(s) 568, 703, 722, 932, 1040, 1322, 1511
PflFI GACNNNGTC 1 cut(s) 1126
PkrI GCNGC 6 cut(s) 16, 103, 549, 805, 1222, 1392
PleI GAGTC 4 cut(s) 102, 259, 373, 551
PpsI GAGTC 4 cut(s) 102, 259, 373, 551
PshBI ATTAAT 1 cut(s) 627
Psp6I CCWGG 5 cut(s) 170, 970, 1060, 1249, 1263
PspGI CCWGG 5 cut(s) 170, 970, 1060, 1249, 1263
PspN4I GGNNCC 1 cut(s) 888
PspPI GGNCC 3 cut(s) 40, 168, 1058
PsyI GACNNNGTC 1 cut(s) 1126
RruI TCGCGA 1 cut(s) 1081
RsaI GTAC 4 cut(s) 5, 309, 1269, 1370
RsaNI GTAC 4 cut(s) 4, 308, 1268, 1369
RseI CAYNNNNRTG 1 cut(s) 1310
SaqAI TTAA 4 cut(s) 210, 336, 627, 1119
SatI GCNGC 6 cut(s) 15, 102, 548, 804, 1221, 1391
Sau3AI GATC 2 cut(s) 859, 1276
Sau96I GGNCC 3 cut(s) 40, 168, 1058
SchI GAGTC 4 cut(s) 103, 259, 374, 551
ScrFI CCNGG 5 cut(s) 172, 972, 1062, 1251, 1265
SduI GDGCHC 2 cut(s) 34, 413
SexAI ACCWGGT 1 cut(s) 1263
SfaNI GCATC 7 cut(s) 386, 485, 985, 1011, 1152, 1179, 1484
SfcI CTRYAG 2 cut(s) 312, 1404
SinI GGWCC 2 cut(s) 168, 1058
SmiMI CAYNNNNRTG 1 cut(s) 1310
SmlI CTYRAG 1 cut(s) 35
SmoI CTYRAG 1 cut(s) 35
SpeI ACTAGT 1 cut(s) 1184
Sse9I AATT 7 cut(s) 337, 750, 761, 775, 837, 1315, 1382
SsiI CCGC 7 cut(s) 12, 15, 108, 421, 442, 804, 1056
SspMI CTAG 6 cut(s) 66, 740, 789, 1185, 1274, 1326
StyD4I CCNGG 5 cut(s) 170, 970, 1060, 1249, 1263
StyI CCWWGG 1 cut(s) 788
TaaI ACNGT 3 cut(s) 168, 920, 1290
TaiI ACGT 2 cut(s) 240, 1370
TaqI TCGA 3 cut(s) 92, 728, 1457
TasI AATT 7 cut(s) 337, 750, 761, 775, 837, 1315, 1382
TatI WGTACW 1 cut(s) 3
TauI GCSGC 2 cut(s) 17, 806
TfiI GAWTC 7 cut(s) 568, 703, 722, 932, 1040, 1322, 1511
Tru1I TTAA 4 cut(s) 210, 336, 627, 1119
Tru9I TTAA 4 cut(s) 210, 336, 627, 1119
TscAI CASTG 2 cut(s) 192, 874
TseFI GTSAC 3 cut(s) 911, 1198, 1489
TseI GCWGC 4 cut(s) 101, 547, 1220, 1390
Tsp45I GTSAC 3 cut(s) 911, 1198, 1489
TspDTI ATGAA 6 cut(s) 645, 1004, 1088, 1328, 1389, 1412
TspRI CASTG 2 cut(s) 192, 874
Tth111I GACNNNGTC 1 cut(s) 1126
VpaK11BI GGWCC 2 cut(s) 168, 1058
VspI ATTAAT 1 cut(s) 627
XagI CCTNNNNNAGG 1 cut(s) 1065
XapI RAATTY 3 cut(s) 750, 761, 1315
XbaI TCTAGA 1 cut(s) 1325
XmaJI CCTAGG 1 cut(s) 788
XmiI GTMKAC 2 cut(s) 736, 1341
XmnI GAANNNNTTC 1 cut(s) 669
XspI CTAG 6 cut(s) 66, 740, 789, 1185, 1274, 1326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.