Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005408

Physical Location & Seq

Genomic Coordinates Forward (+)

1665849 .. 1667394

Gene Structure 1546 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g02180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGGCTCCAAGAAAGCTTCTTGTTTTCTGGGTCGTCGTCTTCTTCCTCATAGCCCTCTTCCTCCGCCGTGGCTCCGCCGAGAACGTCAACTTCTACTTCCCCACTTTCAACTTCCGAAACCTTACCTTCCTCGGCGACTCCCACATCCGAAACGGCGTCGTTGGCCTCACCCGTGAGCTCACGGTCCCCTCCTCCAGCGCCGGCGCCGTCATCTACAACAACCCAATTCGGTTCTTTGACCCGGAATCCAACATCACCGCTTCCTTCTCCACGAAGTTCACTTTCTCCATCGCCAACGTCAATCCAAGCTCTTACGGGGACGGCATGTCGTTTTTCCTCTCGACGGACAACCGGATGCTCGGCAGCCCCGGCGGCTATCTGGGTCTCGTCAATTCCTCCCAAGTGACCAAGAACAAGTTCGTCGCCATCGAATTCGACACGAAGCTCGATTTGCACTTCAACGATCCAAATGACCATCACGTCGGATTGGACATCGAGAGCCTCAATTCGATTAAGACCGCTGATCCAATCTTGCAGGGTGTCGATTTGAAGAGCGGCAGTTCGATTACTACTTGGATTGATTACAAGAATGACCAAGAAAAACTTAAAGTGTATCTAAGCTACTCGAATTTCAAGCCCGAAAAGCCGGTTTTGAGCGTAGATATCGATCTCTCCGAGCATCTGAAGGAGGTTATGTTCGTGGGTTTTTCGGCCTCGACGGAAGGGAGCACGGAGAAGCATTTGGTTGAGAATTGGAGCTTTCATACATTCGGGTTCGTTGCGAAAAGGCCGAAGCTGCAGCCCCACAATGTGTCTGATACTTATGTGGTGGTAAGTCCGAGAATTCCAGTGTCCGGTTCGGGGGATAAGCACCACAGGCGGCTCGGCTTAGGACTTGGTATTGCCGGGCCGGCGTTCTTTTGCGTGGCGCTGTTGGTTTTCGGGTATGTTTCTGTGACGAAATGGATGGAGGTGAGAAGACAGAAGAGCTTCAAAGCAGAGGTTGTGGCAGGGCCCAGAGAGTTCAGTTACAAGGAGCTGAAATCTGCCACAGGAAGGTTTCATTCCAGTAGGATTCTTGGGCATGGAGCTTTCGGGACTGTTTACAAGGCGTTTTTCGTGTCTTCGGGCACCATTTCTGCGGTGAAAAGATCCAAGCATTCCCATGAAGGTAAAACTGAATTTCTTTCTGAGTTGTCGATTATTGCTTGCTTGCGCCACAAGAATTTAGTTCACCTTCAAGGCTGGTGTGTTGACAAGGGTGAATTGCTTCTTGTTTACGATTTCATGCCTAATGGGAGCCTCGAAAAGGCACTGTACCAAGAACCCGGGCAAAGTACCTTGTTAGATTGGTCTCAGAGACTGAATGTTGCGGTTGGATTGGCGTCTGTTTTGACATATCTGCATCAGGAATGTGAGCAGCAGGTCATCCACAGGGACATAAAGACTGGCAATGTTTTGCTGGACGGGAATTTAAATACGAAGCTCACCCTGTTTCCACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0016020 GO:0043207 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

Lectin_legB Pkinase

Protein Analysis

502

Amino Acids

55.91

Weight (kDa)

8.89

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	29 - 257	4e-64	Legume lectin domain
Lectin_L-type_dom	PF18483	50 - 249	3e-12	Legume lectin beta-barrel domain
Pkinase	PF00069	354 - 497	3e-26	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	357 - 497	3.3e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005408)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55830
fragaria_vesca	FvH4_2g31170 FvH4_3g42990 FvH4_4g09342 FvH4_4g11641
malus_domestica	MD03G1026600.v1.1 MD11G1030600.v1.1
prunus_persica	Prupe.6G024000_v2.0.a1
pyrus_communis	pycom03g02180 pycom11g02420 pycom11g02430 pycom11g02480
rosa_chinensis	RchiOBHm_Chr5g0077031
rosa_laevigata	RLG00000036643
rosa_multiflora	Rmu_sc0003323.1_g000008 Rmu_sc0018789.1_g000001 Rmu_ssc0000470.1_g000027
rosa_roxburghii	Rroxscaffold_1G00005100
rosa_rugosa	Rorug05G0450500
rosa_samantha	Rh5AG505100 Rh5BG416900 Rh5BG526800 Rh5CG441400 Rh5CG550600 Rh5DG539000 Rh6AG352200 Rh6CG162900 Rh6DG154500
rosa_wichuraiana	Rw5G047130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	479
Acc36I	ACCTGC	1 cut(s)	1414
AccB1I	GGYRCC	2 cut(s)	203, 1130
AccBSI	CCGCTC	1 cut(s)	555
AciI	CCGC	9 cut(s)	64, 75, 258, 372, 519, 555, 880, 1142, 1373
AclWI	GGATC	3 cut(s)	458, 518, 1146
AcsI	RAATTY	6 cut(s)	431, 628, 843, 1181, 1225, 1471
AcuI	CTGAAG	1 cut(s)	704
AcyI	GRCGYC	3 cut(s)	156, 204, 1385
AdeI	CACNNNGTG	1 cut(s)	811
AfaI	GTAC	2 cut(s)	1319, 1339
AfiI	CCNNNNNNNGG	5 cut(s)	343, 854, 861, 1056, 1309
AgsI	TTSAA	6 cut(s)	109, 460, 550, 634, 994, 1241
AhdI	GACNNNNNGTC	1 cut(s)	325
AjiI	CACGTC	1 cut(s)	481
AjuI	GAANNNNNNNTTGG	2 cut(s)	401, 433
AloI	GAACNNNNNNTCC	2 cut(s)	680, 712
Alw21I	GWGCWC	2 cut(s)	180, 731
Alw26I	GTCTC	3 cut(s)	389, 1354, 1359
AlwI	GGATC	3 cut(s)	458, 518, 1146
AlwNI	CAGNNNCTG	1 cut(s)	1363
Ama87I	CYCGRG	1 cut(s)	1328
AoxI	GGCC	5 cut(s)	163, 711, 788, 908, 1013
ApaI	GGGCCC	1 cut(s)	1017
ApeKI	GCWGC	4 cut(s)	363, 796, 799, 1420
ApoI	RAATTY	6 cut(s)	431, 628, 843, 1181, 1225, 1471
Asp700I	GAANNNNTTC	3 cut(s)	416, 989, 1269
AspLEI	GCGC	4 cut(s)	200, 206, 931, 1218
AspS9I	GGNCC	4 cut(s)	184, 908, 1013, 1014
AsuC2I	CCSGG	5 cut(s)	242, 369, 907, 1329, 1330
AsuHPI	GGTGA	7 cut(s)	160, 247, 985, 1156, 1226, 1274, 1480
AvaI	CYCGRG	1 cut(s)	1328
AvaII	GGWCC	1 cut(s)	184
BaeGI	GKGCMC	2 cut(s)	1017, 1133
BaeI	ACNNNNGTAYC	2 cut(s)	810, 843
BanI	GGYRCC	2 cut(s)	203, 1130
BanII	GRGCYC	2 cut(s)	180, 1017
BbsI	GAAGAC	3 cut(s)	31, 985, 1116
Bbv12I	GWGCWC	2 cut(s)	180, 731
BbvI	GCAGC	4 cut(s)	375, 783, 811, 1432
BccI	CCATC	4 cut(s)	296, 434, 483, 961
BceAI	ACGGC	4 cut(s)	51, 169, 191, 337
BcnI	CCSGG	5 cut(s)	242, 369, 907, 1329, 1330
BcoDI	GTCTC	3 cut(s)	389, 1354, 1359
BfmI	CTRYAG	1 cut(s)	797
BfoI	RGCGCY	3 cut(s)	201, 207, 932
BfuAI	ACCTGC	1 cut(s)	1414
BglI	GCCNNNNNGGC	2 cut(s)	372, 911
BisI	GCNGC	7 cut(s)	364, 373, 556, 797, 800, 881, 1421
BlsI	GCNGC	7 cut(s)	365, 374, 557, 798, 801, 882, 1422
Bme1390I	CCNGG	5 cut(s)	242, 369, 907, 1329, 1330
Bme18I	GGWCC	1 cut(s)	184
BmeRI	GACNNNNNGTC	1 cut(s)	325
BmeT110I	CYCGRG	1 cut(s)	1328
BmgBI	CACGTC	1 cut(s)	481
BmgT120I	GGNCC	4 cut(s)	184, 908, 1013, 1014
BmiI	GGNNCC	7 cut(s)	6, 73, 186, 205, 1015, 1132, 1301
BmrFI	CCNGG	5 cut(s)	242, 369, 907, 1329, 1330
BmsI	GCATC	3 cut(s)	345, 688, 1414
BpiI	GAAGAC	3 cut(s)	31, 985, 1116
BpmI	CTGGAG	1 cut(s)	178
Bpu10I	CCTNAGC	1 cut(s)	889
BpuMI	CCSGG	5 cut(s)	242, 369, 907, 1329, 1330
Bsa29I	ATCGAT	1 cut(s)	666
BsaBI	GATNNNNATC	1 cut(s)	666
BsaHI	GRCGYC	3 cut(s)	156, 204, 1385
BsaI	GGTCTC	2 cut(s)	389, 1359
BsaJI	CCNNGG	4 cut(s)	67, 130, 367, 1328
BsaWI	WCCGGW	2 cut(s)	351, 854
BsaXI	ACNNNNNCTCC	2 cut(s)	680, 710
Bsc4I	CCNNNNNNNGG	5 cut(s)	343, 854, 861, 1056, 1309
Bse118I	RCCGGY	3 cut(s)	200, 646, 910
Bse1I	ACTGG	3 cut(s)	848, 1068, 1453
Bse3DI	GCAATG	1 cut(s)	1459
Bse8I	GATNNNNATC	1 cut(s)	666
BseCI	ATCGAT	1 cut(s)	666
BseDI	CCNNGG	4 cut(s)	67, 130, 367, 1328
BseGI	GGATG	4 cut(s)	144, 360, 972, 1428
BseJI	GATNNNNATC	1 cut(s)	666
BseLI	CCNNNNNNNGG	5 cut(s)	343, 854, 861, 1056, 1309
BseMI	GCAATG	1 cut(s)	1459
BseMII	CTCAG	2 cut(s)	1182, 1370
BseNI	ACTGG	3 cut(s)	848, 1068, 1453
BseRI	GAGGAG	1 cut(s)	181
BseSI	GKGCMC	2 cut(s)	1017, 1133
BseXI	GCAGC	4 cut(s)	375, 783, 811, 1432
BshFI	GGCC	5 cut(s)	165, 713, 790, 910, 1015
BshNI	GGYRCC	2 cut(s)	203, 1130
BshVI	ATCGAT	1 cut(s)	666
BsiHKAI	GWGCWC	2 cut(s)	180, 731
BsiHKCI	CYCGRG	1 cut(s)	1328
BsiSI	CCGG	9 cut(s)	201, 242, 352, 369, 647, 855, 906, 911, 1329
BslFI	GGGAC	4 cut(s)	170, 332, 1111, 1451
BslI	CCNNNNNNNGG	5 cut(s)	343, 854, 861, 1056, 1309
BsmAI	GTCTC	3 cut(s)	389, 1354, 1359
BsmFI	GGGAC	4 cut(s)	170, 332, 1111, 1451
BsmI	GAATGC	1 cut(s)	1159
BsnI	GGCC	5 cut(s)	165, 713, 790, 910, 1015
Bso31I	GGTCTC	2 cut(s)	389, 1359
BsoBI	CYCGRG	1 cut(s)	1328
Bsp120I	GGGCCC	1 cut(s)	1013
Bsp1286I	GDGCHC	4 cut(s)	180, 731, 1017, 1133
Bsp143I	GATC	4 cut(s)	463, 523, 667, 1151
BspACI	CCGC	9 cut(s)	64, 75, 258, 372, 519, 555, 880, 1142, 1373
BspANI	GGCC	5 cut(s)	165, 713, 790, 910, 1015
BspCNI	CTCAG	2 cut(s)	1183, 1369
BspDI	ATCGAT	1 cut(s)	666
BspLI	GGNNCC	7 cut(s)	6, 73, 186, 205, 1015, 1132, 1301
BspMAI	CTGCAG	1 cut(s)	801
BspMI	ACCTGC	1 cut(s)	1414
BspPI	GGATC	3 cut(s)	458, 518, 1146
BspQI	GCTCTTC	2 cut(s)	545, 980
BspT107I	GGYRCC	2 cut(s)	203, 1130
BspTNI	GGTCTC	2 cut(s)	389, 1359
BsrBI	CCGCTC	1 cut(s)	555
BsrDI	GCAATG	1 cut(s)	1459
BsrFI	RCCGGY	3 cut(s)	200, 646, 910
BsrI	ACTGG	3 cut(s)	848, 1068, 1453
BssAI	RCCGGY	3 cut(s)	200, 646, 910
BssECI	CCNNGG	4 cut(s)	67, 130, 367, 1328
BssMI	GATC	4 cut(s)	463, 523, 667, 1151
BssNI	GRCGYC	3 cut(s)	156, 204, 1385
Bst4CI	ACNGT	3 cut(s)	184, 1102, 1317
Bst6I	CTCTTC	3 cut(s)	62, 545, 980
BstACI	GRCGYC	3 cut(s)	156, 204, 1385
BstC8I	GCNNGC	4 cut(s)	202, 912, 1210, 1214
BstDEI	CTNAG	4 cut(s)	617, 889, 1191, 1356
BstDSI	CCRYGG	1 cut(s)	67
BstENI	CCTNNNNNAGG	1 cut(s)	1307
BstF5I	GGATG	4 cut(s)	144, 360, 972, 1428
BstH2I	RGCGCY	3 cut(s)	201, 207, 932
BstHHI	GCGC	4 cut(s)	200, 206, 931, 1218
BstKTI	GATC	4 cut(s)	466, 526, 670, 1154
BstMAI	GTCTC	3 cut(s)	389, 1354, 1359
BstMBI	GATC	4 cut(s)	463, 523, 667, 1151
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 369, 372, 451, 643, 796, 877, 911
BstNSI	RCATGY	1 cut(s)	328
BstSCI	CCNGG	5 cut(s)	240, 367, 905, 1327, 1328
BstSFI	CTRYAG	1 cut(s)	797
BstSLI	GKGCMC	2 cut(s)	1017, 1133
BstV1I	GCAGC	4 cut(s)	375, 783, 811, 1432
BstV2I	GAAGAC	3 cut(s)	31, 985, 1116
BstX2I	RGATCY	1 cut(s)	1151
BstYI	RGATCY	1 cut(s)	1151
Bsu15I	ATCGAT	1 cut(s)	666
BsuRI	GGCC	5 cut(s)	165, 713, 790, 910, 1015
BsuTUI	ATCGAT	1 cut(s)	666
BtgI	CCRYGG	1 cut(s)	67
BtgZI	GCGATG	1 cut(s)	274
BtrI	CACGTC	1 cut(s)	481
BtsCI	GGATG	4 cut(s)	144, 360, 972, 1428
BtsIMutI	CAGTG	3 cut(s)	855, 1313, 1501
BveI	ACCTGC	1 cut(s)	1414
Cac8I	GCNNGC	4 cut(s)	202, 912, 1210, 1214
CaiI	CAGNNNCTG	1 cut(s)	1363
CfoI	GCGC	4 cut(s)	200, 206, 931, 1218
Cfr10I	RCCGGY	3 cut(s)	200, 646, 910
Cfr13I	GGNCC	4 cut(s)	184, 908, 1013, 1014
Cfr9I	CCCGGG	1 cut(s)	1328
ClaI	ATCGAT	1 cut(s)	666
CseI	GACGC	2 cut(s)	145, 1374
Csp6I	GTAC	2 cut(s)	1318, 1338
CviAII	CATG	4 cut(s)	325, 1085, 1166, 1288
CviQI	GTAC	2 cut(s)	1318, 1338
DdeI	CTNAG	4 cut(s)	617, 889, 1191, 1356
DinI	GGCGCC	1 cut(s)	205
DpnI	GATC	4 cut(s)	465, 525, 669, 1153
DpnII	GATC	4 cut(s)	463, 523, 667, 1151
DraI	TTTAAA	1 cut(s)	1476
DraIII	CACNNNGTG	1 cut(s)	811
DrdI	GACNNNNNNGTC	1 cut(s)	479
DriI	GACNNNNNGTC	1 cut(s)	325
DseDI	GACNNNNNNGTC	1 cut(s)	479
Eam1104I	CTCTTC	3 cut(s)	62, 545, 980
Eam1105I	GACNNNNNGTC	1 cut(s)	325
EarI	CTCTTC	3 cut(s)	62, 545, 980
EciI	GGCGGA	2 cut(s)	53, 64
Ecl136II	GAGCTC	1 cut(s)	178
Eco24I	GRGCYC	2 cut(s)	180, 1017
Eco31I	GGTCTC	2 cut(s)	389, 1359
Eco32I	GATATC	1 cut(s)	664
Eco47I	GGWCC	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	178
Eco57I	CTGAAG	1 cut(s)	704
Eco88I	CYCGRG	1 cut(s)	1328
EcoICRI	GAGCTC	1 cut(s)	178
EcoNI	CCTNNNNNAGG	1 cut(s)	1307
EcoO109I	RGGNCCY	1 cut(s)	1013
EcoRI	GAATTC	2 cut(s)	431, 843
EcoRV	GATATC	1 cut(s)	664
EcoT38I	GRGCYC	2 cut(s)	180, 1017
EgeI	GGCGCC	1 cut(s)	205
EheI	GGCGCC	1 cut(s)	205
FaeI	CATG	4 cut(s)	328, 1088, 1169, 1291
FalI	AAGNNNNNCTT	2 cut(s)	588, 620
FaqI	GGGAC	4 cut(s)	170, 332, 1111, 1451
FatI	CATG	4 cut(s)	324, 1084, 1165, 1287
Fnu4HI	GCNGC	7 cut(s)	364, 373, 556, 797, 800, 881, 1421
FokI	GGATG	4 cut(s)	131, 367, 979, 1415
FriOI	GRGCYC	2 cut(s)	180, 1017
Fsp4HI	GCNGC	7 cut(s)	364, 373, 556, 797, 800, 881, 1421
GlaI	GCGC	4 cut(s)	199, 205, 930, 1217
GluI	GCNGC	7 cut(s)	364, 373, 556, 797, 800, 881, 1421
GsuI	CTGGAG	1 cut(s)	178
HaeII	RGCGCY	3 cut(s)	201, 207, 932
HaeIII	GGCC	5 cut(s)	165, 713, 790, 910, 1015
HapII	CCGG	9 cut(s)	201, 242, 352, 369, 647, 855, 906, 911, 1329
HgaI	GACGC	2 cut(s)	145, 1374
HhaI	GCGC	4 cut(s)	200, 206, 931, 1218
Hin1I	GRCGYC	3 cut(s)	156, 204, 1385
Hin1II	CATG	4 cut(s)	328, 1088, 1169, 1291
Hin6I	GCGC	4 cut(s)	198, 204, 929, 1216
HinP1I	GCGC	4 cut(s)	198, 204, 929, 1216
HincII	GTYRAC	2 cut(s)	88, 1255
HindII	GTYRAC	2 cut(s)	88, 1255
HindIII	AAGCTT	1 cut(s)	14
HinfI	GANTC	3 cut(s)	137, 245, 1075
HpaII	CCGG	9 cut(s)	201, 242, 352, 369, 647, 855, 906, 911, 1329
HphI	GGTGA	7 cut(s)	160, 247, 985, 1156, 1226, 1274, 1480
Hpy166II	GTNNAC	6 cut(s)	88, 279, 1105, 1234, 1255, 1279
Hpy188I	TCNGA	9 cut(s)	116, 149, 485, 676, 684, 817, 840, 1192, 1359
Hpy188III	TCNNGA	4 cut(s)	340, 496, 1096, 1409
Hpy8I	GTNNAC	6 cut(s)	88, 279, 1105, 1234, 1255, 1279
Hpy99I	CGWCG	6 cut(s)	38, 161, 346, 425, 485, 721
HpyAV	CCTTC	7 cut(s)	136, 274, 679, 716, 1050, 1163, 1247
HpyCH4III	ACNGT	3 cut(s)	184, 1102, 1317
HpyCH4IV	ACGT	3 cut(s)	84, 297, 480
HpyCH4V	TGCA	4 cut(s)	454, 535, 799, 1405
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 369, 372, 451, 643, 796, 877, 911
HpyF3I	CTNAG	4 cut(s)	617, 889, 1191, 1356
HpySE526I	ACGT	3 cut(s)	84, 297, 480
Hsp92I	GRCGYC	3 cut(s)	156, 204, 1385
Hsp92II	CATG	4 cut(s)	328, 1088, 1169, 1291
HspAI	GCGC	4 cut(s)	198, 204, 929, 1216
KasI	GGCGCC	1 cut(s)	203
KroI	GCCGGC	2 cut(s)	200, 910
KroNI	GCCGGC	2 cut(s)	202, 912
Kzo9I	GATC	4 cut(s)	463, 523, 667, 1151
LguI	GCTCTTC	2 cut(s)	545, 980
LmnI	GCTCC	7 cut(s)	10, 77, 726, 756, 1036, 1088, 1299
Lsp1109I	GCAGC	4 cut(s)	375, 783, 811, 1432
LweI	GCATC	3 cut(s)	345, 688, 1414
MaeII	ACGT	3 cut(s)	84, 297, 480
MaeIII	GTNAC	3 cut(s)	403, 955, 1028
MalI	GATC	4 cut(s)	465, 525, 669, 1153
MbiI	CCGCTC	1 cut(s)	555
MboI	GATC	4 cut(s)	463, 523, 667, 1151
MboII	GAAGA	7 cut(s)	31, 34, 49, 562, 990, 997, 1116
MflI	RGATCY	1 cut(s)	1151
MhlI	GDGCHC	4 cut(s)	180, 731, 1017, 1133
Mly113I	GGCGCC	1 cut(s)	204
MlyI	GAGTC	1 cut(s)	131
MmeI	TCCRAC	3 cut(s)	273, 463, 1357
MreI	CGCCGGCG	1 cut(s)	200
MroNI	GCCGGC	2 cut(s)	200, 910
MroXI	GAANNNNTTC	3 cut(s)	416, 989, 1269
MseI	TTAA	3 cut(s)	513, 606, 1475
MslI	CAYNNNNRTG	1 cut(s)	1164
MspA1I	CMGCKG	1 cut(s)	521
MspI	CCGG	9 cut(s)	201, 242, 352, 369, 647, 855, 906, 911, 1329
MspR9I	CCNGG	5 cut(s)	242, 369, 907, 1329, 1330
Mva1269I	GAATGC	1 cut(s)	1159
MwoI	GCNNNNNNNGC	8 cut(s)	162, 369, 372, 451, 643, 796, 877, 911
NaeI	GCCGGC	2 cut(s)	202, 912
NarI	GGCGCC	1 cut(s)	204
NciI	CCSGG	5 cut(s)	242, 369, 907, 1329, 1330
NdeII	GATC	4 cut(s)	463, 523, 667, 1151
NgoMIV	GCCGGC	2 cut(s)	200, 910
NlaIII	CATG	4 cut(s)	328, 1088, 1169, 1291
NlaIV	GGNNCC	7 cut(s)	6, 73, 186, 205, 1015, 1132, 1301
NmeAIII	GCCGAG	4 cut(s)	103, 111, 339, 864
NmuCI	GTSAC	2 cut(s)	403, 955
NspI	RCATGY	1 cut(s)	328
PciSI	GCTCTTC	2 cut(s)	545, 980
PcsI	WCGNNNNNNNCGW	2 cut(s)	426, 672
PctI	GAATGC	1 cut(s)	1159
PdiI	GCCGGC	2 cut(s)	202, 912
PdmI	GAANNNNTTC	3 cut(s)	416, 989, 1269
PfeI	GAWTC	2 cut(s)	245, 1075
PkrI	GCNGC	7 cut(s)	365, 374, 557, 798, 801, 882, 1422
PleI	GAGTC	1 cut(s)	131
PluTI	GGCGCC	1 cut(s)	207
PpsI	GAGTC	1 cut(s)	131
Psp124BI	GAGCTC	1 cut(s)	180
PspN4I	GGNNCC	7 cut(s)	6, 73, 186, 205, 1015, 1132, 1301
PspOMI	GGGCCC	1 cut(s)	1013
PspPI	GGNCC	4 cut(s)	184, 908, 1013, 1014
PstI	CTGCAG	1 cut(s)	801
PstNI	CAGNNNCTG	1 cut(s)	1363
PsuI	RGATCY	1 cut(s)	1151
RsaI	GTAC	2 cut(s)	1319, 1339
RsaNI	GTAC	2 cut(s)	1318, 1338
RseI	CAYNNNNRTG	1 cut(s)	1164
SacI	GAGCTC	1 cut(s)	180
SapI	GCTCTTC	2 cut(s)	545, 980
SaqAI	TTAA	3 cut(s)	513, 606, 1475
SatI	GCNGC	7 cut(s)	364, 373, 556, 797, 800, 881, 1421
Sau3AI	GATC	4 cut(s)	463, 523, 667, 1151
Sau96I	GGNCC	4 cut(s)	184, 908, 1013, 1014
SchI	GAGTC	1 cut(s)	131
ScrFI	CCNGG	5 cut(s)	242, 369, 907, 1329, 1330
SduI	GDGCHC	4 cut(s)	180, 731, 1017, 1133
SfaNI	GCATC	3 cut(s)	345, 688, 1414
SfcI	CTRYAG	1 cut(s)	797
SfoI	GGCGCC	1 cut(s)	205
SgrAI	CRCCGGYG	1 cut(s)	200
SinI	GGWCC	1 cut(s)	184
SmaI	CCCGGG	1 cut(s)	1330
SmiI	ATTTAAAT	1 cut(s)	1476
SmiMI	CAYNNNNRTG	1 cut(s)	1164
SsiI	CCGC	9 cut(s)	64, 75, 258, 372, 519, 555, 880, 1142, 1373
SspDI	GGCGCC	1 cut(s)	203
SstI	GAGCTC	1 cut(s)	180
StyD4I	CCNGG	5 cut(s)	240, 367, 905, 1327, 1328
SwaI	ATTTAAAT	1 cut(s)	1476
TaaI	ACNGT	3 cut(s)	184, 1102, 1317
TaiI	ACGT	3 cut(s)	87, 300, 483
TauI	GCSGC	3 cut(s)	375, 558, 883
TfiI	GAWTC	2 cut(s)	245, 1075
Tru1I	TTAA	3 cut(s)	513, 606, 1475
Tru9I	TTAA	3 cut(s)	513, 606, 1475
TscAI	CASTG	2 cut(s)	855, 1320
TseFI	GTSAC	2 cut(s)	403, 955
TseI	GCWGC	4 cut(s)	363, 796, 799, 1420
Tsp45I	GTSAC	2 cut(s)	403, 955
TspDTI	ATGAA	4 cut(s)	752, 1052, 1182, 1276
TspGWI	ACGGA	3 cut(s)	359, 734, 746
TspMI	CCCGGG	1 cut(s)	1328
TspRI	CASTG	2 cut(s)	855, 1320
VpaK11BI	GGWCC	1 cut(s)	184
XagI	CCTNNNNNAGG	1 cut(s)	1307
XapI	RAATTY	6 cut(s)	431, 628, 843, 1181, 1225, 1471
XceI	RCATGY	1 cut(s)	328
XmaI	CCCGGG	1 cut(s)	1328
XmnI	GAANNNNTTC	3 cut(s)	416, 989, 1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.