Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0005408

Physical Location & Seq

Genomic Coordinates Forward (+)

6896143 .. 6898167

Gene Structure 2025 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00005100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGAACCCAAGAAAGCTTCTTGCTTTCTTTCTCTTCCTCCTCCTCCGCTGCTTCTCCTCCGCCTCCGCCGAGAACCTCAGCTTCGACTTCCCCTCCTTCAACTTCCGCAACCTCACCTTCCTCGGCTCCTCCCACATCCGCAACGGCGTCGTCGGCCTCACCCGCGACCTCCCCGTCCCCACCTCCTCCGCCGGCTCCGTCCTCTACAACTCCCCCGTCCGCTTCTTCGACCCCGACTCCAACACCACCGCCTCCTTCTCCACCCGCTTCACCTTCTCCTTCTCCAATCTCAACCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGGCGACGGCATGTCGTTTTTCCTCTCCCCCAACAACCAAACCCTCGGCAGCTCCGGCGCCTACTTGGGTCTCCTCAACTCCTCCCTCCCCACCCACAACCACTTCATCGCCGTCGAATTCGACACCCGGCAAGATACCCACTTTTCCGACCCGAACGACAACCACGTCGGTCTTGACATCGACACCTTGATCTCCATCAAGACCGCCGACCCCATTGACCAAGACGTTGACTTGAAGAGCGGCACCGCCATCACGGCCTGGATCGACTACAAGAACGACCAAGAAACGCTTAAGGTGTACCTGAGCTACTCCGGGTTCAAACCCGAGACCCCTGTTTTGAACGTGGGGATTGATCTTTCTGGGTATCTGAAGGAGGTTATGTATGTGGGTTTCTCTGCTTCCACTGAAGGAAGCACTGAGCTTCATGAGATTGAGAATTGGAGCTTCAGGACATCTGGGTTTGTGCCGAAAAGGCCCACATTGCATCCTCACAATGTGTCTGATACTTATGTGATTGTCAGTCCAAGGCTGCCGGCGCCGGAGAAGGGACACAAGAGGCGGCTGGGGCTGGGGCTTGGGATTGCCGGGCCGGCCTTCTTTTGCGTTGCGCTGGCGGTTTTCGGGTATGTGAGTGTGAGGAAGTGGAGGGAGGTGAAGAGAGTGAAGAGTTTTAAAGCAGAGGTGGTGGCAGGGCCGAGGCAATTTAGCTATAGAGAGCTGAGGGCGGCTACAGGAGGGTTCCATGGGAGTAGGATTATTGGGCATGGTGCATTTGGGACTGTGTACAAGGCGTTTTTCGTGGCGTCGGGGACTATTGCGGCGGTGAAGAGGTCGAGGCATTCTCATGAAGGTAAGACTGAGTTTCTTGCTGAGTTGTCTATTATAGCTTGCTTGAGGCACAAGAATTTAGTGCATTTGCAAGGGTGGTGTGTTGAGAAAGGTGAGTTGCTGCTTGTGTATGATTTCATGCCTAATGGTAGTCTTGAGAGAGTGCTTTACCAAGAAAGTGAGGAGGGTAACTTGTTGGATTGGCCTCATAGGAATAATGTTGCAATTGGTTTGGCGTCTGTTTTGACGTATATGCATCAAGAATGTGAGCAGCAAGTGATTCATAGGGATATTAAGACTGGTAATGTGTTGCTCGATGGGAATTTCAATGCAAAGCTTGGTGATTTTGGATTGGCAAAGCTCATGGATCATGATAAGAGCCCTGTTTCGACACTGACAGCTGGAACAATGGGGTACCTTGCGCCCGAGTATCTTCAGTATGGGAAAGCAACTGAGAAGACTGATGCTTTCAGCTATGGTGTGGTTATACTTGAATTGGCTTGTGGGAGGAGACCAATTGAGAGAATTCCGGATTGTCACAAAATGGTGAATTTGGTTGATTGGGTTTGGGGACTGCATTCTGAAGGAAGGATTATTGATGCAGCTGATCAGAGGTTGGCTGGGGAGTTTGATGTGGAAGAAATGCGGAAGCTGTTGCTTGTCGGTTTGAGTTGTGCTAACCCAGATAGCTCCAAGAGGCCTACAATGAGGAGAGTTCTACAAATCTTGAGTAATGAGGCAGAACCTCCAGCTGTGCCGAGGGTTAAGCCAAGTCTCAGTTTCTCTTGTGGCGTGTCTTTGTCTGTTGATGACATTGTTTCAGATTGTGATGGCAGCCTCACCAGCTCAATGTGCGAGATTGTTGTCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0016020 GO:0043207 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

674

Amino Acids

74.25

Weight (kDa)

6.32

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	26 - 265	4.3e-64	Legume lectin domain
Lectin_L-type_dom	PF18483	48 - 253	5.2e-12	Legume lectin beta-barrel domain
Pkinase	PF00069	356 - 625	2.2e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	359 - 625	1.2e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005408)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55830
fragaria_vesca	FvH4_2g31170 FvH4_3g42990 FvH4_4g09342 FvH4_4g11641
malus_domestica	MD03G1026600.v1.1 MD11G1030600.v1.1
prunus_persica	Prupe.6G024000_v2.0.a1
pyrus_communis	pycom03g02180 pycom11g02420 pycom11g02430 pycom11g02480
rosa_chinensis	RchiOBHm_Chr5g0077031
rosa_laevigata	RLG00000036643
rosa_multiflora	Rmu_sc0003323.1_g000008 Rmu_sc0018789.1_g000001 Rmu_ssc0000470.1_g000027
rosa_roxburghii	Rroxscaffold_1G00005100
rosa_rugosa	Rorug05G0450500
rosa_samantha	Rh5AG505100 Rh5BG416900 Rh5BG526800 Rh5CG441400 Rh5CG550600 Rh5DG539000 Rh6AG352200 Rh6CG162900 Rh6DG154500
rosa_wichuraiana	Rw5G047130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	173, 488
Acc65I	GGTACC	1 cut(s)	1566
AccB1I	GGYRCC	4 cut(s)	380, 566, 859, 1566
AccBSI	CCGCTC	1 cut(s)	564
AccII	CGCG	1 cut(s)	165
AccIII	TCCGGA	1 cut(s)	1681
AclWI	GGATC	2 cut(s)	593, 1527
AcsI	RAATTY	5 cut(s)	440, 1228, 1474, 1677, 1702
AcuI	CTGAAG	5 cut(s)	713, 750, 754, 1571, 1755
AcyI	GRCGYC	5 cut(s)	147, 381, 860, 1127, 1388
AdeI	CACNNNGTG	1 cut(s)	820
AfaI	GTAC	3 cut(s)	623, 1109, 1568
AfiI	CCNNNNNNNGG	1 cut(s)	869
AflII	CTTAAG	1 cut(s)	614
AgsI	TTSAA	6 cut(s)	100, 559, 643, 664, 1480, 1646
AhdI	GACNNNNNGTC	1 cut(s)	334
AjiI	CACGTC	1 cut(s)	490
AjnI	CCWGG	1 cut(s)	581
Alw26I	GTCTC	4 cut(s)	398, 644, 1657, 1931
AlwI	GGATC	2 cut(s)	593, 1527
Ama87I	CYCGRG	2 cut(s)	647, 1577
Aor13HI	TCCGGA	1 cut(s)	1681
AoxI	GGCC	8 cut(s)	154, 579, 797, 911, 915, 1016, 1355, 1850
ApeKI	GCWGC	7 cut(s)	48, 372, 853, 1273, 1423, 1754, 1986
ApoI	RAATTY	5 cut(s)	440, 1228, 1474, 1677, 1702
ArsI	GACNNNNNNTTYG	2 cut(s)	643, 675
Asp718I	GGTACC	1 cut(s)	1566
AspLEI	GCGC	4 cut(s)	383, 862, 934, 1576
AspS9I	GGNCC	3 cut(s)	798, 911, 1016
AsuC2I	CCSGG	3 cut(s)	451, 637, 910
AsuHPI	GGTGA	9 cut(s)	106, 151, 262, 988, 1159, 1277, 1505, 1711, 1984
AvaI	CYCGRG	2 cut(s)	647, 1577
BaeI	ACNNNNGTAYC	2 cut(s)	819, 852
BanI	GGYRCC	4 cut(s)	380, 566, 859, 1566
BanII	GRGCYC	1 cut(s)	1535
BbsI	GAAGAC	1 cut(s)	1616
BbvCI	CCTCAGC	2 cut(s)	77, 1043
BbvI	GCAGC	7 cut(s)	35, 384, 840, 1260, 1435, 1766, 1998
BccI	CCATC	4 cut(s)	527, 581, 1463, 1976
BceAI	ACGGC	4 cut(s)	160, 346, 419, 594
BcgI	CGANNNNNNTGC	2 cut(s)	130, 164
BciT130I	CCWGG	1 cut(s)	583
BclI	TGATCA	1 cut(s)	1759
BcnI	CCSGG	3 cut(s)	451, 637, 910
BcoDI	GTCTC	4 cut(s)	398, 644, 1657, 1931
BfmI	CTRYAG	2 cut(s)	1033, 1053
BfoI	RGCGCY	2 cut(s)	384, 863
BfrI	CTTAAG	1 cut(s)	614
BglI	GCCNNNNNGGC	3 cut(s)	578, 796, 914
Bme1390I	CCNGG	4 cut(s)	451, 583, 637, 910
BmeRI	GACNNNNNGTC	1 cut(s)	334
BmeT110I	CYCGRG	2 cut(s)	647, 1577
BmgBI	CACGTC	1 cut(s)	490
BmgT120I	GGNCC	3 cut(s)	798, 911, 1016
BmiI	GGNNCC	7 cut(s)	127, 196, 382, 568, 861, 1064, 1568
BmrFI	CCNGG	4 cut(s)	451, 583, 637, 910
BmsI	GCATC	4 cut(s)	817, 1417, 1606, 1741
BpiI	GAAGAC	1 cut(s)	1616
BplI	GAGNNNNNCTC	2 cut(s)	1150, 1182
BpmI	CTGGAG	1 cut(s)	1884
Bpu10I	CCTNAGC	3 cut(s)	77, 626, 1043
BpuEI	CTTGAG	3 cut(s)	1237, 1328, 1900
BpuMI	CCSGG	3 cut(s)	451, 637, 910
BsaBI	GATNNNNATC	1 cut(s)	518
BsaHI	GRCGYC	5 cut(s)	147, 381, 860, 1127, 1388
BsaI	GGTCTC	3 cut(s)	398, 644, 1657
BsaJI	CCNNGG	6 cut(s)	121, 367, 848, 1019, 1066, 1910
BsaWI	WCCGGW	1 cut(s)	1681
BsaXI	ACNNNNNCTCC	8 cut(s)	77, 107, 221, 251, 284, 314, 689, 719
Bsc4I	CCNNNNNNNGG	1 cut(s)	869
Bse118I	RCCGGY	3 cut(s)	191, 856, 913
Bse1I	ACTGG	1 cut(s)	1456
Bse3DI	GCAATG	1 cut(s)	803
Bse8I	GATNNNNATC	1 cut(s)	518
BseAI	TCCGGA	1 cut(s)	1681
BseBI	CCWGG	1 cut(s)	583
BseDI	CCNNGG	6 cut(s)	121, 367, 848, 1019, 1066, 1910
BseGI	GGATG	2 cut(s)	135, 808
BseJI	GATNNNNATC	1 cut(s)	518
BseLI	CCNNNNNNNGG	1 cut(s)	869
BseMI	GCAATG	1 cut(s)	803
BseMII	CTCAG	8 cut(s)	91, 617, 732, 1034, 1173, 1185, 1596, 1942
BseNI	ACTGG	1 cut(s)	1456
BseXI	GCAGC	7 cut(s)	35, 384, 840, 1260, 1435, 1766, 1998
BseYI	CCCAGC	3 cut(s)	886, 892, 1772
Bsh1236I	CGCG	1 cut(s)	165
BshFI	GGCC	8 cut(s)	156, 581, 799, 913, 917, 1018, 1357, 1852
BshNI	GGYRCC	4 cut(s)	380, 566, 859, 1566
BsiHKCI	CYCGRG	2 cut(s)	647, 1577
BslFI	GGGAC	5 cut(s)	161, 885, 1114, 1147, 1737
BslI	CCNNNNNNNGG	1 cut(s)	869
BsmAI	GTCTC	4 cut(s)	398, 644, 1657, 1931
BsmFI	GGGAC	5 cut(s)	161, 885, 1114, 1147, 1737
BsmI	GAATGC	2 cut(s)	1162, 1729
BsnI	GGCC	8 cut(s)	156, 581, 799, 913, 917, 1018, 1357, 1852
Bso31I	GGTCTC	3 cut(s)	398, 644, 1657
BsoBI	CYCGRG	2 cut(s)	647, 1577
Bsp1286I	GDGCHC	1 cut(s)	1535
Bsp13I	TCCGGA	1 cut(s)	1681
Bsp1407I	TGTACA	1 cut(s)	1107
Bsp143I	GATC	5 cut(s)	513, 585, 676, 1519, 1759
Bsp19I	CCATGG	1 cut(s)	1066
BspANI	GGCC	8 cut(s)	156, 581, 799, 913, 917, 1018, 1357, 1852
BspCNI	CTCAG	8 cut(s)	90, 618, 733, 1035, 1174, 1186, 1597, 1941
BspEI	TCCGGA	1 cut(s)	1681
BspFNI	CGCG	1 cut(s)	165
BspHI	TCATGA	3 cut(s)	748, 1168, 1522
BspLI	GGNNCC	7 cut(s)	127, 196, 382, 568, 861, 1064, 1568
BspPI	GGATC	2 cut(s)	593, 1527
BspQI	GCTCTTC	1 cut(s)	554
BspT107I	GGYRCC	4 cut(s)	380, 566, 859, 1566
BspTI	CTTAAG	1 cut(s)	614
BspTNI	GGTCTC	3 cut(s)	398, 644, 1657
BsrBI	CCGCTC	1 cut(s)	564
BsrDI	GCAATG	1 cut(s)	803
BsrFI	RCCGGY	3 cut(s)	191, 856, 913
BsrGI	TGTACA	1 cut(s)	1107
BsrI	ACTGG	1 cut(s)	1456
BssAI	RCCGGY	3 cut(s)	191, 856, 913
BssECI	CCNNGG	6 cut(s)	121, 367, 848, 1019, 1066, 1910
BssMI	GATC	5 cut(s)	513, 585, 676, 1519, 1759
BssNI	GRCGYC	5 cut(s)	147, 381, 860, 1127, 1388
BssT1I	CCWWGG	2 cut(s)	848, 1066
Bst2UI	CCWGG	1 cut(s)	583
Bst4CI	ACNGT	1 cut(s)	1105
Bst6I	CTCTTC	5 cut(s)	38, 554, 974, 983, 1145
BstACI	GRCGYC	5 cut(s)	147, 381, 860, 1127, 1388
BstAFI	CTTAAG	1 cut(s)	614
BstAUI	TGTACA	1 cut(s)	1107
BstC8I	GCNNGC	5 cut(s)	193, 858, 915, 936, 1213
BstDEI	CTNAG	8 cut(s)	77, 626, 741, 1043, 1182, 1194, 1605, 1928
BstDSI	CCRYGG	1 cut(s)	1066
BstF5I	GGATG	2 cut(s)	135, 808
BstFNI	CGCG	1 cut(s)	165
BstH2I	RGCGCY	2 cut(s)	384, 863
BstHHI	GCGC	4 cut(s)	383, 862, 934, 1576
BstKTI	GATC	5 cut(s)	516, 588, 679, 1522, 1762
BstMAI	GTCTC	4 cut(s)	398, 644, 1657, 1931
BstMBI	GATC	5 cut(s)	513, 585, 676, 1519, 1759
BstNI	CCWGG	1 cut(s)	583
BstNSI	RCATGY	1 cut(s)	337
BstSCI	CCNGG	4 cut(s)	449, 581, 635, 908
BstSFI	CTRYAG	2 cut(s)	1033, 1053
BstUI	CGCG	1 cut(s)	165
BstV1I	GCAGC	7 cut(s)	35, 384, 840, 1260, 1435, 1766, 1998
BstV2I	GAAGAC	1 cut(s)	1616
BsuRI	GGCC	8 cut(s)	156, 581, 799, 913, 917, 1018, 1357, 1852
BtgI	CCRYGG	1 cut(s)	1066
BtgZI	GCGATG	1 cut(s)	415
BtrI	CACGTC	1 cut(s)	490
BtsCI	GGATG	2 cut(s)	135, 808
BtsIMutI	CAGTG	3 cut(s)	726, 738, 1544
Cac8I	GCNNGC	5 cut(s)	193, 858, 915, 936, 1213
CciI	TCATGA	3 cut(s)	748, 1168, 1522
CfoI	GCGC	4 cut(s)	383, 862, 934, 1576
Cfr10I	RCCGGY	3 cut(s)	191, 856, 913
Cfr13I	GGNCC	3 cut(s)	798, 911, 1016
CseI	GACGC	3 cut(s)	136, 1116, 1377
Csp6I	GTAC	3 cut(s)	622, 1108, 1567
CviAII	CATG	8 cut(s)	334, 749, 1067, 1088, 1169, 1291, 1516, 1523
CviQI	GTAC	3 cut(s)	622, 1108, 1567
DdeI	CTNAG	8 cut(s)	77, 626, 741, 1043, 1182, 1194, 1605, 1928
DinI	GGCGCC	2 cut(s)	382, 861
DpnI	GATC	5 cut(s)	515, 587, 678, 1521, 1761
DpnII	GATC	5 cut(s)	513, 585, 676, 1519, 1759
DraI	TTTAAA	1 cut(s)	997
DraIII	CACNNNGTG	1 cut(s)	820
DrdI	GACNNNNNNGTC	2 cut(s)	173, 488
DriI	GACNNNNNGTC	1 cut(s)	334
DseDI	GACNNNNNNGTC	2 cut(s)	173, 488
Eam1104I	CTCTTC	5 cut(s)	38, 554, 974, 983, 1145
Eam1105I	GACNNNNNGTC	1 cut(s)	334
EarI	CTCTTC	5 cut(s)	38, 554, 974, 983, 1145
EciI	GGCGGA	3 cut(s)	49, 55, 178
Eco130I	CCWWGG	2 cut(s)	848, 1066
Eco147I	AGGCCT	1 cut(s)	1852
Eco24I	GRGCYC	1 cut(s)	1535
Eco31I	GGTCTC	3 cut(s)	398, 644, 1657
Eco57I	CTGAAG	5 cut(s)	713, 750, 754, 1571, 1755
Eco88I	CYCGRG	2 cut(s)	647, 1577
EcoRI	GAATTC	2 cut(s)	440, 1677
EcoRII	CCWGG	1 cut(s)	581
EcoT14I	CCWWGG	2 cut(s)	848, 1066
EcoT22I	ATGCAT	1 cut(s)	1410
EcoT38I	GRGCYC	1 cut(s)	1535
EgeI	GGCGCC	2 cut(s)	382, 861
EheI	GGCGCC	2 cut(s)	382, 861
ErhI	CCWWGG	2 cut(s)	848, 1066
FaeI	CATG	8 cut(s)	337, 752, 1070, 1091, 1172, 1294, 1519, 1526
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FaqI	GGGAC	5 cut(s)	161, 885, 1114, 1147, 1737
FatI	CATG	8 cut(s)	333, 748, 1066, 1087, 1168, 1290, 1515, 1522
FauI	CCCGC	2 cut(s)	170, 272
FbaI	TGATCA	1 cut(s)	1759
FokI	GGATG	2 cut(s)	122, 795
FriOI	GRGCYC	1 cut(s)	1535
FseI	GGCCGGCC	1 cut(s)	917
GlaI	GCGC	4 cut(s)	382, 861, 933, 1575
GsaI	CCCAGC	3 cut(s)	890, 896, 1776
GsuI	CTGGAG	1 cut(s)	1884
HaeII	RGCGCY	2 cut(s)	384, 863
HaeIII	GGCC	8 cut(s)	156, 581, 799, 913, 917, 1018, 1357, 1852
HgaI	GACGC	3 cut(s)	136, 1116, 1377
HhaI	GCGC	4 cut(s)	383, 862, 934, 1576
Hin1I	GRCGYC	5 cut(s)	147, 381, 860, 1127, 1388
Hin1II	CATG	8 cut(s)	337, 752, 1070, 1091, 1172, 1294, 1519, 1526
Hin6I	GCGC	4 cut(s)	381, 860, 932, 1574
HinP1I	GCGC	4 cut(s)	381, 860, 932, 1574
HincII	GTYRAC	2 cut(s)	553, 2020
HindII	GTYRAC	2 cut(s)	553, 2020
HindIII	AAGCTT	2 cut(s)	14, 1487
HinfI	GANTC	2 cut(s)	236, 1432
HphI	GGTGA	9 cut(s)	106, 151, 262, 988, 1159, 1277, 1505, 1711, 1984
Hpy166II	GTNNAC	4 cut(s)	553, 622, 1108, 2020
Hpy188I	TCNGA	6 cut(s)	472, 693, 826, 1735, 1764, 1975
Hpy8I	GTNNAC	4 cut(s)	553, 622, 1108, 2020
Hpy99I	CGWCG	6 cut(s)	152, 155, 332, 440, 494, 1132
HpyCH4III	ACNGT	1 cut(s)	1105
HpyCH4IV	ACGT	4 cut(s)	489, 549, 666, 1400
HpyCH4V	TGCA	9 cut(s)	808, 1094, 1237, 1243, 1376, 1408, 1484, 1729, 1754
HpyF3I	CTNAG	8 cut(s)	77, 626, 741, 1043, 1182, 1194, 1605, 1928
HpySE526I	ACGT	4 cut(s)	489, 549, 666, 1400
Hsp92I	GRCGYC	5 cut(s)	147, 381, 860, 1127, 1388
Hsp92II	CATG	8 cut(s)	337, 752, 1070, 1091, 1172, 1294, 1519, 1526
HspAI	GCGC	4 cut(s)	381, 860, 932, 1574
KasI	GGCGCC	2 cut(s)	380, 859
Kpn2I	TCCGGA	1 cut(s)	1681
KpnI	GGTACC	1 cut(s)	1570
KroI	GCCGGC	3 cut(s)	191, 856, 913
KroNI	GCCGGC	3 cut(s)	193, 858, 915
Ksp22I	TGATCA	1 cut(s)	1759
Kzo9I	GATC	5 cut(s)	513, 585, 676, 1519, 1759
LguI	GCTCTTC	1 cut(s)	554
LmnI	GCTCC	5 cut(s)	131, 200, 380, 765, 1847
Lsp1109I	GCAGC	7 cut(s)	35, 384, 840, 1260, 1435, 1766, 1998
LweI	GCATC	4 cut(s)	817, 1417, 1606, 1741
MaeII	ACGT	4 cut(s)	489, 549, 666, 1400
MaeIII	GTNAC	2 cut(s)	1340, 1688
MalI	GATC	5 cut(s)	515, 587, 678, 1521, 1761
MbiI	CCGCTC	1 cut(s)	564
MboI	GATC	5 cut(s)	513, 585, 676, 1519, 1759
MboII	GAAGA	9 cut(s)	25, 217, 571, 991, 1000, 1162, 1577, 1621, 1802
MfeI	CAATTG	2 cut(s)	1377, 1668
MhlI	GDGCHC	1 cut(s)	1535
Mly113I	GGCGCC	2 cut(s)	381, 860
MlyI	GAGTC	1 cut(s)	230
MmeI	TCCRAC	3 cut(s)	264, 495, 1329
Mph1103I	ATGCAT	1 cut(s)	1410
MroI	TCCGGA	1 cut(s)	1681
MroNI	GCCGGC	3 cut(s)	191, 856, 913
MseI	TTAA	4 cut(s)	615, 996, 1446, 1917
MslI	CAYNNNNRTG	1 cut(s)	1167
MspA1I	CMGCKG	4 cut(s)	48, 1553, 1757, 1904
MspCI	CTTAAG	1 cut(s)	614
MspR9I	CCNGG	4 cut(s)	451, 583, 637, 910
MunI	CAATTG	2 cut(s)	1377, 1668
Mva1269I	GAATGC	2 cut(s)	1162, 1729
MvaI	CCWGG	1 cut(s)	583
MvnI	CGCG	1 cut(s)	165
NaeI	GCCGGC	3 cut(s)	193, 858, 915
NarI	GGCGCC	2 cut(s)	381, 860
NciI	CCSGG	3 cut(s)	451, 637, 910
NcoI	CCATGG	1 cut(s)	1066
NdeII	GATC	5 cut(s)	513, 585, 676, 1519, 1759
NgoMIV	GCCGGC	3 cut(s)	191, 856, 913
NlaIII	CATG	8 cut(s)	337, 752, 1070, 1091, 1172, 1294, 1519, 1526
NlaIV	GGNNCC	7 cut(s)	127, 196, 382, 568, 861, 1064, 1568
NmeAIII	GCCGAG	5 cut(s)	94, 102, 348, 1044, 1935
NmuCI	GTSAC	1 cut(s)	1688
NsiI	ATGCAT	1 cut(s)	1410
NspI	RCATGY	1 cut(s)	337
PagI	TCATGA	3 cut(s)	748, 1168, 1522
PceI	AGGCCT	1 cut(s)	1852
PciSI	GCTCTTC	1 cut(s)	554
PcsI	WCGNNNNNNNCGW	1 cut(s)	486
PctI	GAATGC	2 cut(s)	1162, 1729
PdiI	GCCGGC	3 cut(s)	193, 858, 915
PfeI	GAWTC	1 cut(s)	1432
PleI	GAGTC	1 cut(s)	230
PluTI	GGCGCC	2 cut(s)	384, 863
PpsI	GAGTC	1 cut(s)	230
Psp6I	CCWGG	1 cut(s)	581
PspFI	CCCAGC	3 cut(s)	886, 892, 1772
PspGI	CCWGG	1 cut(s)	581
PspN4I	GGNNCC	7 cut(s)	127, 196, 382, 568, 861, 1064, 1568
PspPI	GGNCC	3 cut(s)	798, 911, 1016
PvuII	CAGCTG	3 cut(s)	1553, 1757, 1904
RigI	GGCCGGCC	1 cut(s)	917
RsaI	GTAC	3 cut(s)	623, 1109, 1568
RsaNI	GTAC	3 cut(s)	622, 1108, 1567
RseI	CAYNNNNRTG	1 cut(s)	1167
SapI	GCTCTTC	1 cut(s)	554
SaqAI	TTAA	4 cut(s)	615, 996, 1446, 1917
Sau3AI	GATC	5 cut(s)	513, 585, 676, 1519, 1759
Sau96I	GGNCC	3 cut(s)	798, 911, 1016
SchI	GAGTC	1 cut(s)	230
ScrFI	CCNGG	4 cut(s)	451, 583, 637, 910
SduI	GDGCHC	1 cut(s)	1535
SfaNI	GCATC	4 cut(s)	817, 1417, 1606, 1741
SfcI	CTRYAG	2 cut(s)	1033, 1053
SfoI	GGCGCC	2 cut(s)	382, 861
SmiMI	CAYNNNNRTG	1 cut(s)	1167
SmlI	CTYRAG	4 cut(s)	614, 1216, 1307, 1879
SmoI	CTYRAG	4 cut(s)	614, 1216, 1307, 1879
SseBI	AGGCCT	1 cut(s)	1852
SspDI	GGCGCC	2 cut(s)	380, 859
StuI	AGGCCT	1 cut(s)	1852
StyD4I	CCNGG	4 cut(s)	449, 581, 635, 908
StyI	CCWWGG	2 cut(s)	848, 1066
TaaI	ACNGT	1 cut(s)	1105
TaiI	ACGT	4 cut(s)	492, 552, 669, 1403
TaqI	TCGA	9 cut(s)	84, 228, 438, 444, 504, 588, 1157, 1467, 1541
TaqII	GACCGA	1 cut(s)	482
TatI	WGTACW	1 cut(s)	1107
TauI	GCSGC	4 cut(s)	567, 886, 1052, 1145
TfiI	GAWTC	1 cut(s)	1432
Tru1I	TTAA	4 cut(s)	615, 996, 1446, 1917
Tru9I	TTAA	4 cut(s)	615, 996, 1446, 1917
TscAI	CASTG	3 cut(s)	733, 745, 1551
TseFI	GTSAC	1 cut(s)	1688
TseI	GCWGC	7 cut(s)	48, 372, 853, 1273, 1423, 1754, 1986
Tsp45I	GTSAC	1 cut(s)	1688
TspDTI	ATGAA	6 cut(s)	17, 418, 737, 1185, 1279, 1424
TspGWI	ACGGA	1 cut(s)	187
TspRI	CASTG	3 cut(s)	733, 745, 1551
Vha464I	CTTAAG	1 cut(s)	614
XapI	RAATTY	5 cut(s)	440, 1228, 1474, 1677, 1702
XceI	RCATGY	1 cut(s)	337
Zsp2I	ATGCAT	1 cut(s)	1410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.