pycom04g02620

Phosphoenolpyruvate phosphomutase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
2318691 .. 2324156
5466 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g02620.6

Sequence Viewer

Length: 1530 bp
ATGAATCTGCAGCATCAGGTGTTGCTTAGCAGAAACTGCAGCAGCACCGTCTCTCTTCTTCCCCACAATTCCTCCTCCTCTTTCAATCCCACCACCACATCTTCAAATCTCCCATTTGGGTCATCGTCAGCCCTCCATTTCAATCAACAGCGACCACTTTCACTGCCCCACAAGTTCAAACACACCACTTTCACTGCCAAAGGGGCGGCCCTCCAAACCATCGCAGCTTACTCCGGAGGAGACAGAGAAATGGCCCCCGAGTCTCCGGCGAAAGAGCTCCGCCGGATTCTGCAGTTGCCGGGGGTTGTCCAGGCCCCTGCTTGTTTTGATGCTCTGAGTGCCAAGCTTGTGGAAAGAGCTGGCTTTCAGTGCTGCTTCACTAGTGGATTTTCAATATCGGCTGCTAGATTAGCGTTGCCAGATACAGGTTTTATATCCTATGGAGAAATGGTGGATCAGGGGCAACAAATTACCCAAGCTGTGTCAATTCCTGTTATCGGTGATGGTGATAATGGATATGGGAATGCAATGAATGTGAAGAGAACTGTCAAGGGATACATTAAAGCTGGTTTTGCTGGGATTTTGCTTGAAGATCAGGTCTCTCCAAAAGCTTGTGGTCATACGCAAGGAAGGAAAGTGGTGTCAAGAGAGGAGGCTGTAATGCGGATAAGAGCAGCTGTTGATGCTCGGAAAGAGAGCAGCTCTGACATTGTCATTGTAGCAAGAACTGATTCTCGTCAAGCAGTGTCTTTGGATGAAGCACTCTGGAGGTCAAGGGCATTTGCTGATGCTGGTGCAGATGTTCTTTTCATTGACGCACTTGCTTCTAAAGAAGAGATGAAGGCTTTCTGTGGGATATCTCCCTTAGTTCCAAAAATGGCTAATATGCTTGAAGGAGGAGGTAAAACGCCAATACTCAATCCGCTTGAACTTGAGGATGTTGGGTATAAAATTGTGGCTTATCCGCTTTCCTTGATTGGGGTATCTATTCAAGCAATGCAGGTAGCACTGGCTGGTCTCAAAGGAGGCCGCATCCCTCCTCCTGGTAGCATGCCGTCCTTCGAAGAGCTTAAGGAGATTCTAGGTTTCAACAGTTATTATGAAGAAGAAAAACTGTATTCTACCAGCAGCAGTCAGCTATCTCCAGAAAGATTGACCAGTAGTGTATACAGTCTCCAAAGGACTGCTAGAGATGGTGGAGAGCAGAAAGATCAGAATCCTCAAGATCCCGTTGTTGAAGTTATAACACCTGACGTGTACAATAACTATGATGCAGATGGTTCCAGGGGTCCATTTTCTGGGATCTGGTCTCGGACGTTGAGGGTCAAAATAACTGGAAGGGATGGCTTTGAGAGACTGGATGTTCGGATTCCTGCTGGATTCTTGGAAGGAATCACAAATATAGTTCCAGCTCTCGTGGGTGTGAACATCAAACAACTGCTAAACGAGGCAACTGATGAAATGGGAGGGAAGCTGCTGCTAGATTTTAATGACACAATTGGTGATAGGATTCAAGTTTTTCTAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

510

Amino Acids

54.96

Weight (kDa)

5.85

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1244
Acc36I ACCTGC 1 cut(s) 991
AccB7I CCANNNNNTGG 1 cut(s) 1298
AccI GTMKAC 1 cut(s) 1167
AccIII TCCGGA 1 cut(s) 233
AciI CCGC 6 cut(s) 206, 280, 664, 923, 965, 1030
AclWI GGATC 3 cut(s) 462, 1220, 1310
AfaI GTAC 1 cut(s) 1259
AfiI CCNNNNNNNGG 5 cut(s) 425, 497, 978, 1043, 1298
AflII CTTAAG 1 cut(s) 1070
AflIII ACRYGT 1 cut(s) 1254
AhlI ACTAGT 1 cut(s) 380
AjiI CACGTC 1 cut(s) 1255
AjnI CCWGG 3 cut(s) 309, 1042, 1283
Alw21I GWGCWC 1 cut(s) 279
Alw26I GTCTC 8 cut(s) 55, 234, 267, 604, 1022, 1178, 1314, 1348
AlwI GGATC 3 cut(s) 462, 1220, 1310
AlwNI CAGNNNCTG 1 cut(s) 36
Ama87I CYCGRG 1 cut(s) 257
Aor13HI TCCGGA 1 cut(s) 233
AoxI GGCC 4 cut(s) 207, 252, 312, 1027
ArsI GACNNNNNNTTYG 2 cut(s) 1347, 1379
Asp700I GAANNNNTTC 2 cut(s) 730, 845
AspS9I GGNCC 4 cut(s) 208, 253, 313, 1289
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 3 cut(s) 512, 518, 1514
AsuII TTCGAA 1 cut(s) 1062
AvaI CYCGRG 1 cut(s) 257
AvaII GGWCC 1 cut(s) 1289
BanII GRGCYC 1 cut(s) 279
BauI CACGAG 1 cut(s) 1415
Bbv12I GWGCWC 1 cut(s) 279
BccI CCATC 5 cut(s) 227, 497, 1187, 1271, 1337
BceAI ACGGC 1 cut(s) 1039
BciT130I CCWGG 3 cut(s) 311, 1044, 1285
BciVI GTATCC 1 cut(s) 548
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 8 cut(s) 55, 234, 267, 604, 1022, 1178, 1314, 1348
BcuI ACTAGT 1 cut(s) 380
BfaI CTAG 6 cut(s) 381, 405, 1082, 1188, 1481, 1523
BfmI CTRYAG 3 cut(s) 8, 37, 290
BfrI CTTAAG 1 cut(s) 1070
BfuAI ACCTGC 1 cut(s) 991
BfuI GTATCC 1 cut(s) 548
BglI GCCNNNNNGGC 1 cut(s) 203
BlpI GCTNAGC 1 cut(s) 26
Bme1390I CCNGG 4 cut(s) 300, 311, 1044, 1285
Bme18I GGWCC 1 cut(s) 1289
BmeT110I CYCGRG 1 cut(s) 257
BmgBI CACGTC 1 cut(s) 1255
BmgT120I GGNCC 4 cut(s) 208, 253, 313, 1289
BmiI GGNNCC 4 cut(s) 255, 315, 1282, 1290
BmrFI CCNGG 4 cut(s) 300, 311, 1044, 1285
BmsI GCATC 6 cut(s) 22, 319, 673, 778, 1041, 1261
BplI GAGNNNNNCTC 2 cut(s) 686, 718
BpmI CTGGAG 2 cut(s) 787, 1128
Bpu1102I GCTNAGC 1 cut(s) 26
Bpu14I TTCGAA 1 cut(s) 1062
BpuEI CTTGAG 2 cut(s) 953, 1206
BpuMI CCSGG 1 cut(s) 300
BsaBI GATNNNNATC 1 cut(s) 1215
BsaI GGTCTC 3 cut(s) 604, 1022, 1314
BsaJI CCNNGG 2 cut(s) 299, 1284
BsaWI WCCGGW 1 cut(s) 233
BsaXI ACNNNNNCTCC 4 cut(s) 56, 86, 435, 465
Bsc4I CCNNNNNNNGG 5 cut(s) 425, 497, 978, 1043, 1298
Bse1I ACTGG 4 cut(s) 1014, 1158, 1339, 1362
Bse3DI GCAATG 2 cut(s) 534, 1002
Bse8I GATNNNNATC 1 cut(s) 1215
BseAI TCCGGA 1 cut(s) 233
BseBI CCWGG 3 cut(s) 311, 1044, 1285
BseDI CCNNGG 2 cut(s) 299, 1284
BseGI GGATG 5 cut(s) 760, 943, 1032, 1348, 1366
BseJI GATNNNNATC 1 cut(s) 1215
BseLI CCNNNNNNNGG 5 cut(s) 425, 497, 978, 1043, 1298
BseMI GCAATG 2 cut(s) 534, 1002
BseMII CTCAG 1 cut(s) 326
BseNI ACTGG 4 cut(s) 1014, 1158, 1339, 1362
BseRI GAGGAG 6 cut(s) 64, 67, 252, 665, 912, 1029
BseYI CCCAGC 1 cut(s) 575
BsgI GTGCAG 1 cut(s) 816
BshFI GGCC 4 cut(s) 209, 254, 314, 1029
BsiHKAI GWGCWC 1 cut(s) 279
BsiHKCI CYCGRG 1 cut(s) 257
BsiSI CCGG 4 cut(s) 234, 266, 283, 299
BslI CCNNNNNNNGG 5 cut(s) 425, 497, 978, 1043, 1298
BsmAI GTCTC 8 cut(s) 55, 234, 267, 604, 1022, 1178, 1314, 1348
BsmBI CGTCTC 1 cut(s) 55
BsmI GAATGC 1 cut(s) 529
BsnI GGCC 4 cut(s) 209, 254, 314, 1029
Bso31I GGTCTC 3 cut(s) 604, 1022, 1314
BsoBI CYCGRG 1 cut(s) 257
Bsp119I TTCGAA 1 cut(s) 1062
Bsp1286I GDGCHC 1 cut(s) 279
Bsp13I TCCGGA 1 cut(s) 233
Bsp1407I TGTACA 1 cut(s) 1257
Bsp143I GATC 5 cut(s) 454, 592, 1210, 1225, 1302
Bsp1720I GCTNAGC 1 cut(s) 26
BspACI CCGC 6 cut(s) 206, 280, 664, 923, 965, 1030
BspANI GGCC 4 cut(s) 209, 254, 314, 1029
BspCNI CTCAG 1 cut(s) 327
BspEI TCCGGA 1 cut(s) 233
BspLI GGNNCC 4 cut(s) 255, 315, 1282, 1290
BspMAI CTGCAG 3 cut(s) 12, 41, 294
BspMI ACCTGC 1 cut(s) 991
BspPI GGATC 3 cut(s) 462, 1220, 1310
BspQI GCTCTTC 1 cut(s) 1059
BspT104I TTCGAA 1 cut(s) 1062
BspTI CTTAAG 1 cut(s) 1070
BspTNI GGTCTC 3 cut(s) 604, 1022, 1314
BsrDI GCAATG 2 cut(s) 534, 1002
BsrGI TGTACA 1 cut(s) 1257
BsrI ACTGG 4 cut(s) 1014, 1158, 1339, 1362
BssECI CCNNGG 2 cut(s) 299, 1284
BssMI GATC 5 cut(s) 454, 592, 1210, 1225, 1302
BssNAI GTATAC 1 cut(s) 1168
BssSI CACGAG 1 cut(s) 1415
Bst1107I GTATAC 1 cut(s) 1168
Bst2BI CACGAG 1 cut(s) 1415
Bst2UI CCWGG 3 cut(s) 311, 1044, 1285
Bst4CI ACNGT 5 cut(s) 49, 547, 1094, 1116, 1172
Bst6I CTCTTC 4 cut(s) 60, 533, 828, 1059
BstAFI CTTAAG 1 cut(s) 1070
BstAPI GCANNNNNTGC 1 cut(s) 36
BstAUI TGTACA 1 cut(s) 1257
BstBI TTCGAA 1 cut(s) 1062
BstC8I GCNNGC 2 cut(s) 361, 1052
BstDEI CTNAG 3 cut(s) 26, 335, 865
BstF5I GGATG 5 cut(s) 760, 943, 1032, 1348, 1366
BstKTI GATC 5 cut(s) 457, 595, 1213, 1228, 1305
BstMAI GTCTC 8 cut(s) 55, 234, 267, 604, 1022, 1178, 1314, 1348
BstMBI GATC 5 cut(s) 454, 592, 1210, 1225, 1302
BstMWI GCNNNNNNNGC 7 cut(s) 36, 203, 338, 369, 410, 572, 683
BstNI CCWGG 3 cut(s) 311, 1044, 1285
BstNSI RCATGY 1 cut(s) 1054
BstSCI CCNGG 4 cut(s) 298, 309, 1042, 1283
BstSFI CTRYAG 3 cut(s) 8, 37, 290
BstX2I RGATCY 2 cut(s) 1225, 1302
BstXI CCANNNNNNTGG 1 cut(s) 349
BstYI RGATCY 2 cut(s) 1225, 1302
BstZ17I GTATAC 1 cut(s) 1168
BsuI GTATCC 1 cut(s) 548
BsuRI GGCC 4 cut(s) 209, 254, 314, 1029
BtgZI GCGATG 1 cut(s) 205
BtrI CACGTC 1 cut(s) 1255
BtsCI GGATG 5 cut(s) 760, 943, 1032, 1348, 1366
BtsI GCAGTG 3 cut(s) 161, 192, 750
BtsIMutI CAGTG 5 cut(s) 161, 192, 374, 750, 1007
BveI ACCTGC 1 cut(s) 991
Cac8I GCNNGC 2 cut(s) 361, 1052
CaiI CAGNNNCTG 1 cut(s) 36
Cfr13I GGNCC 4 cut(s) 208, 253, 313, 1289
CseI GACGC 1 cut(s) 824
Csp6I GTAC 1 cut(s) 1258
CviAII CATG 1 cut(s) 1051
CviQI GTAC 1 cut(s) 1258
DdeI CTNAG 3 cut(s) 26, 335, 865
DpnI GATC 5 cut(s) 456, 594, 1212, 1227, 1304
DpnII GATC 5 cut(s) 454, 592, 1210, 1225, 1302
Eam1104I CTCTTC 4 cut(s) 60, 533, 828, 1059
EarI CTCTTC 4 cut(s) 60, 533, 828, 1059
EciI GGCGGA 1 cut(s) 269
Ecl136II GAGCTC 1 cut(s) 277
Eco24I GRGCYC 1 cut(s) 279
Eco31I GGTCTC 3 cut(s) 604, 1022, 1314
Eco32I GATATC 1 cut(s) 858
Eco47I GGWCC 1 cut(s) 1289
Eco53kI GAGCTC 1 cut(s) 277
Eco88I CYCGRG 1 cut(s) 257
EcoICRI GAGCTC 1 cut(s) 277
EcoO109I RGGNCCY 1 cut(s) 313
EcoRII CCWGG 3 cut(s) 309, 1042, 1283
EcoRV GATATC 1 cut(s) 858
EcoT38I GRGCYC 1 cut(s) 279
Esp3I CGTCTC 1 cut(s) 55
FaeI CATG 1 cut(s) 1054
FatI CATG 1 cut(s) 1050
FblI GTMKAC 1 cut(s) 1167
FokI GGATG 5 cut(s) 767, 950, 1019, 1355, 1373
FriOI GRGCYC 1 cut(s) 279
FspBI CTAG 6 cut(s) 381, 405, 1082, 1188, 1481, 1523
GsaI CCCAGC 1 cut(s) 579
GsuI CTGGAG 2 cut(s) 787, 1128
HaeIII GGCC 4 cut(s) 209, 254, 314, 1029
HapII CCGG 4 cut(s) 234, 266, 283, 299
HgaI GACGC 1 cut(s) 824
Hin1II CATG 1 cut(s) 1054
HindIII AAGCTT 2 cut(s) 344, 609
HpaII CCGG 4 cut(s) 234, 266, 283, 299
HphI GGTGA 3 cut(s) 512, 518, 1514
Hpy166II GTNNAC 3 cut(s) 1168, 1258, 1426
Hpy188I TCNGA 6 cut(s) 336, 690, 706, 1215, 1314, 1368
Hpy188III TCNNGA 6 cut(s) 234, 645, 766, 1145, 1223, 1523
Hpy8I GTNNAC 3 cut(s) 1168, 1258, 1426
HpyAV CCTTC 6 cut(s) 624, 835, 887, 1069, 1332, 1382
HpyCH4III ACNGT 5 cut(s) 49, 547, 1094, 1116, 1172
HpyCH4IV ACGT 2 cut(s) 1254, 1316
HpyCH4V TGCA 7 cut(s) 10, 39, 292, 527, 797, 1000, 1274
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 203, 338, 369, 410, 572, 683
HpyF3I CTNAG 3 cut(s) 26, 335, 865
HpySE526I ACGT 2 cut(s) 1254, 1316
Hsp92II CATG 1 cut(s) 1054
Kpn2I TCCGGA 1 cut(s) 233
Kzo9I GATC 5 cut(s) 454, 592, 1210, 1225, 1302
LguI GCTCTTC 1 cut(s) 1059
LmnI GCTCC 1 cut(s) 282
LweI GCATC 6 cut(s) 22, 319, 673, 778, 1041, 1261
MaeI CTAG 6 cut(s) 381, 405, 1082, 1188, 1481, 1523
MaeII ACGT 2 cut(s) 1254, 1316
MalI GATC 5 cut(s) 456, 594, 1212, 1227, 1304
MboI GATC 5 cut(s) 454, 592, 1210, 1225, 1302
MboII GAAGA 9 cut(s) 47, 50, 93, 550, 602, 845, 1076, 1115, 1118
MfeI CAATTG 1 cut(s) 1497
MflI RGATCY 2 cut(s) 1225, 1302
MhlI GDGCHC 1 cut(s) 279
MluCI AATT 5 cut(s) 67, 468, 486, 951, 1497
MlyI GAGTC 1 cut(s) 269
MroI TCCGGA 1 cut(s) 233
MroXI GAANNNNTTC 2 cut(s) 730, 845
MseI TTAA 3 cut(s) 561, 1071, 1488
MspA1I CMGCKG 1 cut(s) 677
MspCI CTTAAG 1 cut(s) 1070
MspI CCGG 4 cut(s) 234, 266, 283, 299
MspR9I CCNGG 4 cut(s) 300, 311, 1044, 1285
MunI CAATTG 1 cut(s) 1497
Mva1269I GAATGC 1 cut(s) 529
MvaI CCWGG 3 cut(s) 311, 1044, 1285
MwoI GCNNNNNNNGC 7 cut(s) 36, 203, 338, 369, 410, 572, 683
NciI CCSGG 1 cut(s) 300
NdeII GATC 5 cut(s) 454, 592, 1210, 1225, 1302
NlaIII CATG 1 cut(s) 1054
NlaIV GGNNCC 4 cut(s) 255, 315, 1282, 1290
NspI RCATGY 1 cut(s) 1054
NspV TTCGAA 1 cut(s) 1062
PaeI GCATGC 1 cut(s) 1054
PciSI GCTCTTC 1 cut(s) 1059
PctI GAATGC 1 cut(s) 529
PdmI GAANNNNTTC 2 cut(s) 730, 845
PfeI GAWTC 9 cut(s) 4, 286, 731, 1078, 1216, 1369, 1380, 1392, 1510
PflFI GACNNNGTC 1 cut(s) 710
PflMI CCANNNNNTGG 1 cut(s) 1298
PleI GAGTC 1 cut(s) 268
PpsI GAGTC 1 cut(s) 268
PsiI TTATAA 1 cut(s) 1244
Psp124BI GAGCTC 1 cut(s) 279
Psp6I CCWGG 3 cut(s) 309, 1042, 1283
PspFI CCCAGC 1 cut(s) 575
PspGI CCWGG 3 cut(s) 309, 1042, 1283
PspN4I GGNNCC 4 cut(s) 255, 315, 1282, 1290
PspPI GGNCC 4 cut(s) 208, 253, 313, 1289
PstI CTGCAG 3 cut(s) 12, 41, 294
PstNI CAGNNNCTG 1 cut(s) 36
PsuI RGATCY 2 cut(s) 1225, 1302
PsyI GACNNNGTC 1 cut(s) 710
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 1 cut(s) 1259
RsaNI GTAC 1 cut(s) 1258
SacI GAGCTC 1 cut(s) 279
SapI GCTCTTC 1 cut(s) 1059
SaqAI TTAA 3 cut(s) 561, 1071, 1488
Sau3AI GATC 5 cut(s) 454, 592, 1210, 1225, 1302
Sau96I GGNCC 4 cut(s) 208, 253, 313, 1289
SchI GAGTC 1 cut(s) 269
ScrFI CCNGG 4 cut(s) 300, 311, 1044, 1285
SduI GDGCHC 1 cut(s) 279
SfaNI GCATC 6 cut(s) 22, 319, 673, 778, 1041, 1261
SfcI CTRYAG 3 cut(s) 8, 37, 290
SfuI TTCGAA 1 cut(s) 1062
SinI GGWCC 1 cut(s) 1289
SmlI CTYRAG 3 cut(s) 932, 1070, 1221
SmoI CTYRAG 3 cut(s) 932, 1070, 1221
SpeI ACTAGT 1 cut(s) 380
SphI GCATGC 1 cut(s) 1054
Sse9I AATT 5 cut(s) 67, 468, 486, 951, 1497
SsiI CCGC 6 cut(s) 206, 280, 664, 923, 965, 1030
SspMI CTAG 6 cut(s) 381, 405, 1082, 1188, 1481, 1523
SstI GAGCTC 1 cut(s) 279
StyD4I CCNGG 4 cut(s) 298, 309, 1042, 1283
TaaI ACNGT 5 cut(s) 49, 547, 1094, 1116, 1172
TaiI ACGT 2 cut(s) 1257, 1319
TaqI TCGA 1 cut(s) 1062
TasI AATT 5 cut(s) 67, 468, 486, 951, 1497
TatI WGTACW 1 cut(s) 1257
TauI GCSGC 2 cut(s) 209, 1032
TfiI GAWTC 9 cut(s) 4, 286, 731, 1078, 1216, 1369, 1380, 1392, 1510
Tru1I TTAA 3 cut(s) 561, 1071, 1488
Tru9I TTAA 3 cut(s) 561, 1071, 1488
TscAI CASTG 5 cut(s) 168, 199, 374, 750, 1014
TspDTI ATGAA 7 cut(s) 17, 545, 771, 799, 854, 1116, 1473
TspRI CASTG 5 cut(s) 168, 199, 374, 750, 1014
Tth111I GACNNNGTC 1 cut(s) 710
Van91I CCANNNNNTGG 1 cut(s) 1298
Vha464I CTTAAG 1 cut(s) 1070
VpaK11BI GGWCC 1 cut(s) 1289
XbaI TCTAGA 1 cut(s) 1522
XceI RCATGY 1 cut(s) 1054
XmiI GTMKAC 1 cut(s) 1167
XmnI GAANNNNTTC 2 cut(s) 730, 845
XspI CTAG 6 cut(s) 381, 405, 1082, 1188, 1481, 1523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.