Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0004495

Physical Location & Seq

Genomic Coordinates Forward (+)

30588873 .. 30594583

Gene Structure 5711 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00353090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCGTCATCCTCCGGTGGTCCGACGGTGGGACGGAGCGGCGATGGTGGAGCTCGACATCGACGGTGGAGTGGTGGGCGTGGTGGCTCGAGAGAGAGAGAGAGAAAGAGAGCCCGAGACGAGGTGGGTAGCAGAGACTGCAGTGTGTCTCTTCCCCACAGCTCCTCTTTCAATGTCAGCAGCTCGCCTTCAAACCTTACATTCGGGTCACGTCTTCATCAACGATCACTAACACTGCCCCACAAGTCAAATGCGTCTCCTGTTATTACCACAAGGATTCTCGCAGCTTACTCAGGAGAATCAGCGCCGCCGCCCGAGTCTCCGGCCAAAGCGCTCCGCCGGATTCTGGAGTTGCCAGGGGTTCACCAAGGCCCTGCTTGCTTTGATGGTCTCAGCGCCAAGCTTGTCGAAAGAGCTGGCTTCCAGTATTGCTTCACCAGTGGATTTTCGATATCAGCTGCTAGATTAGGGCTGCCAGATACAGGTTTTCTATCCTATGGAGAAATGGTGGATCAGGGGCAACAAATTACCCAAGCTGTGTCAATTCCTGTCATTGGGGATGGCGATAACGGTTACGGGAATGCAATGAATGTCAAGAGAACTGTCAAGGGATATATTAGAGCTGGCTTTGCTGGGATTCTGCTTGAAGATCAGGTGTCTCCAAAAGCTTGCGGTCATACACAAGGAAGGAAAGTGGTGTCAAGGGAGGAAGCTGTGATGCGGATAAAAGCAGCAGTTGATGCTCGGAAAGAGAGTGGCTCTGACATTGTAATTGTAGCACGATCTGATTCTCGTCAGGCAGTGTCTTTGGAAGAAGCACTTTGGAGGTCAAGGGCATTCGCTGATGCTGGAGCAGATGTTCTTTTCATTGATGCACTAGCCTCAAAAGAAGAAATGAAGGCTTTCTGTGGAGTATATCCCCTAGTTCCAAAAATGGACGCACTAGCTGCTATCAGAGGAGGTCGTATCCCTCCACCTGGAAGCATGCCATCTTTTGCAGAGGTTAAGGAGGTCCTAGGTTTCAACAGTTATTATGAAGAAGAAAAGCGGTATTATAGTAACAGCAGTCAGCTGTCTTCTGAAAGATTGGCCAGTAGTGTATACAGTCTTCAAGGGACATCTAAAAATGCAGAACCAAAAGATCAGAGTCCTCAAGATCCCATTGTTGAAGTTATAACACCTGAAGTGTACAATAACTATGGTGCAGATGGTTTCAAGGATTCATTTTCCGGGATCTGGTCTCGGAAGTTGAGAATCAAAATAACCGGAAGAGATGGATTTGAGAAACTTGATGTTAGTATTCCTGCTGGATTCTTGGACGGAATCACCAATATAGTTCCAGCTCTTGGGGGTGTAAACATTAAAGAATTGTTGAATGAGGCAGCTGATGAAATGGGAGGGAAGCAGCTGTTAGATTTTAATGACACAATGGGTGATAGAATTCAAGTTTTTCTAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PEP_mutase

Protein Analysis

486

Amino Acids

52.26

Weight (kDa)

8.15

Isoelectric Point (pI)

49.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEP_mutase	PF13714	125 - 306	2.3e-41	Phosphoenolpyruvate phosphomutase
ICL	PF00463	182 - 269	1.2e-12	Isocitrate lyase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004495)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43180 AT2G43180 AT2G43180 AT2G43180
fragaria_vesca	FvH4_4g11620 FvH4_4g11620
malus_domestica	MD04G1031000.v1.1
prunus_persica	Prupe.1G182700_v2.0.a1 Prupe.1G182700_v2.0.a1 Prupe.1G182700_v2.0.a1
pyrus_communis	pycom04g02620
rosa_chinensis	RchiOBHm_Chr4g0408741 RchiOBHm_Chr4g0408751
rosa_laevigata	RLG00000008633 RLG00000008634
rosa_multiflora	Rmu_sc0001258.1_g000006 Rmu_sc0005878.1_g000017 Rmu_sc0007333.1_g000009
rosa_roxburghii	Rroxscaffold_5G00353090
rosa_rugosa	Rorug04G0087300
rosa_samantha	Rh1DG149900 Rh4AG151500 Rh4AG151600 Rh4BG148700 Rh4BG148800 Rh4CG159600 Rh4CG159800 Rh4DG144700 Rh4DG144800
rosa_wichuraiana	Rw0G015170 Rw4G012420 Rw4G012440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1175
AccB7I	CCANNNNNTGG	1 cut(s)	1346
AccBSI	CCGCTC	1 cut(s)	39
AccI	GTMKAC	1 cut(s)	1101
AciI	CCGC	7 cut(s)	39, 308, 311, 337, 672, 721, 1048
AclWI	GGATC	3 cut(s)	519, 1151, 1241
AcoI	YGGCCR	2 cut(s)	324, 1089
AcsI	RAATTY	1 cut(s)	1440
AcuI	CTGAAG	1 cut(s)	1203
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	1 cut(s)	1190
AfeI	AGCGCT	1 cut(s)	333
AfiI	CCNNNNNNNGG	8 cut(s)	29, 121, 346, 482, 554, 977, 1236, 1346
AgsI	TTSAA	9 cut(s)	172, 192, 647, 1024, 1112, 1169, 1216, 1375, 1445
AjiI	CACGTC	1 cut(s)	212
AjnI	CCWGG	2 cut(s)	355, 976
AloI	GAACNNNNNNTCC	2 cut(s)	843, 875
Alw21I	GWGCWC	1 cut(s)	55
Alw26I	GTCTC	8 cut(s)	111, 129, 153, 261, 324, 395, 663, 1245
AlwI	GGATC	3 cut(s)	519, 1151, 1241
AlwNI	CAGNNNCTG	1 cut(s)	138
Ama87I	CYCGRG	3 cut(s)	88, 114, 314
Aor51HI	AGCGCT	1 cut(s)	333
AoxI	GGCC	3 cut(s)	324, 370, 1089
ApeKI	GCWGC	8 cut(s)	180, 284, 458, 472, 731, 947, 1382, 1405
ApoI	RAATTY	1 cut(s)	1440
Asp700I	GAANNNNTTC	1 cut(s)	902
AspA2I	CCTAGG	1 cut(s)	1015
AspLEI	GCGC	3 cut(s)	307, 334, 398
AspS9I	GGNCC	3 cut(s)	20, 371, 1012
AsuC2I	CCSGG	1 cut(s)	1231
AsuHPI	GGTGA	4 cut(s)	356, 427, 1318, 1445
AvaI	CYCGRG	3 cut(s)	88, 114, 314
AvaII	GGWCC	2 cut(s)	20, 1012
AvrII	CCTAGG	1 cut(s)	1015
BalI	TGGCCA	1 cut(s)	1091
BanII	GRGCYC	2 cut(s)	55, 115
BarI	GAAGNNNNNNTAC	2 cut(s)	1092, 1124
BbsI	GAAGAC	3 cut(s)	206, 1068, 1100
Bbv12I	GWGCWC	1 cut(s)	55
BbvI	GCAGC	8 cut(s)	192, 296, 445, 459, 743, 934, 1394, 1417
BccI	CCATC	6 cut(s)	38, 380, 554, 997, 1202, 1268
BciT130I	CCWGG	2 cut(s)	357, 978
BciVI	GTATCC	1 cut(s)	977
BcnI	CCSGG	1 cut(s)	1231
BcoDI	GTCTC	8 cut(s)	111, 129, 153, 261, 324, 395, 663, 1245
BfaI	CTAG	6 cut(s)	462, 878, 923, 944, 1016, 1454
BfmI	CTRYAG	1 cut(s)	139
BfoI	RGCGCY	3 cut(s)	308, 335, 399
BfuI	GTATCC	1 cut(s)	977
BlnI	CCTAGG	1 cut(s)	1015
Bme1390I	CCNGG	3 cut(s)	357, 978, 1231
Bme18I	GGWCC	2 cut(s)	20, 1012
BmeT110I	CYCGRG	3 cut(s)	88, 114, 314
BmgBI	CACGTC	1 cut(s)	212
BmgT120I	GGNCC	3 cut(s)	20, 371, 1012
BmrFI	CCNGG	3 cut(s)	357, 978, 1231
BmsI	GCATC	4 cut(s)	708, 730, 835, 862
BpiI	GAAGAC	3 cut(s)	206, 1068, 1100
BplI	GAGNNNNNCTC	2 cut(s)	743, 775
BpmI	CTGGAG	2 cut(s)	368, 870
BpuEI	CTTGAG	1 cut(s)	1137
BpuMI	CCSGG	1 cut(s)	1231
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	2 cut(s)	395, 1245
BsaJI	CCNNGG	3 cut(s)	356, 367, 1015
BsaWI	WCCGGW	2 cut(s)	14, 1265
BsaXI	ACNNNNNCTCC	4 cut(s)	492, 522, 843, 873
Bsc4I	CCNNNNNNNGG	8 cut(s)	29, 121, 346, 482, 554, 977, 1236, 1346
Bse1I	ACTGG	3 cut(s)	424, 438, 1092
Bse3DI	GCAATG	1 cut(s)	591
BseBI	CCWGG	2 cut(s)	357, 978
BseDI	CCNNGG	3 cut(s)	356, 367, 1015
BseGI	GGATG	2 cut(s)	8, 565
BseLI	CCNNNNNNNGG	8 cut(s)	29, 121, 346, 482, 554, 977, 1236, 1346
BseMI	GCAATG	1 cut(s)	591
BseMII	CTCAG	2 cut(s)	306, 406
BseNI	ACTGG	3 cut(s)	424, 438, 1092
BseRI	GAGGAG	2 cut(s)	154, 972
BseXI	GCAGC	8 cut(s)	192, 296, 445, 459, 743, 934, 1394, 1417
BseYI	CCCAGC	1 cut(s)	632
BsgI	GTGCAG	1 cut(s)	1224
BshFI	GGCC	3 cut(s)	326, 372, 1091
BsiHKAI	GWGCWC	1 cut(s)	55
BsiHKCI	CYCGRG	3 cut(s)	88, 114, 314
BsiSI	CCGG	5 cut(s)	15, 323, 340, 1230, 1266
BslFI	GGGAC	2 cut(s)	45, 1129
BslI	CCNNNNNNNGG	8 cut(s)	29, 121, 346, 482, 554, 977, 1236, 1346
BsmAI	GTCTC	8 cut(s)	111, 129, 153, 261, 324, 395, 663, 1245
BsmBI	CGTCTC	2 cut(s)	111, 261
BsmFI	GGGAC	2 cut(s)	45, 1129
BsmI	GAATGC	2 cut(s)	586, 836
BsnI	GGCC	3 cut(s)	326, 372, 1091
Bso31I	GGTCTC	2 cut(s)	395, 1245
BsoBI	CYCGRG	3 cut(s)	88, 114, 314
Bsp1286I	GDGCHC	2 cut(s)	55, 115
Bsp1407I	TGTACA	1 cut(s)	1188
Bsp143I	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
BspACI	CCGC	7 cut(s)	39, 308, 311, 337, 672, 721, 1048
BspANI	GGCC	3 cut(s)	326, 372, 1091
BspCNI	CTCAG	2 cut(s)	305, 405
BspMAI	CTGCAG	1 cut(s)	143
BspPI	GGATC	3 cut(s)	519, 1151, 1241
BspTNI	GGTCTC	2 cut(s)	395, 1245
BsrBI	CCGCTC	1 cut(s)	39
BsrDI	GCAATG	1 cut(s)	591
BsrGI	TGTACA	1 cut(s)	1188
BsrI	ACTGG	3 cut(s)	424, 438, 1092
BssECI	CCNNGG	3 cut(s)	356, 367, 1015
BssMI	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
BssNAI	GTATAC	1 cut(s)	1102
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	2 cut(s)	367, 1015
Bst1107I	GTATAC	1 cut(s)	1102
Bst2UI	CCWGG	2 cut(s)	357, 978
Bst4CI	ACNGT	6 cut(s)	28, 66, 572, 604, 1028, 1106
Bst6I	CTCTTC	2 cut(s)	156, 1264
BstACI	GRCGYC	1 cut(s)	5
BstAPI	GCANNNNNTGC	3 cut(s)	138, 740, 947
BstAUI	TGTACA	1 cut(s)	1188
BstC8I	GCNNGC	6 cut(s)	185, 379, 418, 625, 670, 986
BstDEI	CTNAG	2 cut(s)	292, 392
BstF5I	GGATG	2 cut(s)	8, 565
BstH2I	RGCGCY	3 cut(s)	308, 335, 399
BstHHI	GCGC	3 cut(s)	307, 334, 398
BstKTI	GATC	7 cut(s)	227, 514, 652, 785, 1144, 1159, 1236
BstMAI	GTCTC	8 cut(s)	111, 129, 153, 261, 324, 395, 663, 1245
BstMBI	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
BstMWI	GCNNNNNNNGC	5 cut(s)	138, 378, 629, 740, 947
BstNI	CCWGG	2 cut(s)	357, 978
BstNSI	RCATGY	1 cut(s)	988
BstSCI	CCNGG	3 cut(s)	355, 976, 1229
BstSFI	CTRYAG	1 cut(s)	139
BstV1I	GCAGC	8 cut(s)	192, 296, 445, 459, 743, 934, 1394, 1417
BstV2I	GAAGAC	3 cut(s)	206, 1068, 1100
BstX2I	RGATCY	2 cut(s)	1156, 1233
BstYI	RGATCY	2 cut(s)	1156, 1233
BstZ17I	GTATAC	1 cut(s)	1102
BsuI	GTATCC	1 cut(s)	977
BsuRI	GGCC	3 cut(s)	326, 372, 1091
BtgZI	GCGATG	1 cut(s)	57
BtrI	CACGTC	1 cut(s)	212
BtsCI	GGATG	2 cut(s)	8, 565
BtsI	GCAGTG	3 cut(s)	148, 233, 807
BtsIMutI	CAGTG	4 cut(s)	148, 233, 445, 807
Cac8I	GCNNGC	6 cut(s)	185, 379, 418, 625, 670, 986
CaiI	CAGNNNCTG	1 cut(s)	138
CfoI	GCGC	3 cut(s)	307, 334, 398
Cfr13I	GGNCC	3 cut(s)	20, 371, 1012
CseI	GACGC	2 cut(s)	243, 947
Csp6I	GTAC	1 cut(s)	1189
CviAII	CATG	1 cut(s)	985
CviQI	GTAC	1 cut(s)	1189
DdeI	CTNAG	2 cut(s)	292, 392
DpnI	GATC	7 cut(s)	226, 513, 651, 784, 1143, 1158, 1235
DpnII	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
EaeI	YGGCCR	2 cut(s)	324, 1089
Eam1104I	CTCTTC	2 cut(s)	156, 1264
EarI	CTCTTC	2 cut(s)	156, 1264
EciI	GGCGGA	1 cut(s)	326
Ecl136II	GAGCTC	1 cut(s)	53
Eco130I	CCWWGG	2 cut(s)	367, 1015
Eco24I	GRGCYC	2 cut(s)	55, 115
Eco31I	GGTCTC	2 cut(s)	395, 1245
Eco32I	GATATC	1 cut(s)	453
Eco47I	GGWCC	2 cut(s)	20, 1012
Eco47III	AGCGCT	1 cut(s)	333
Eco53kI	GAGCTC	1 cut(s)	53
Eco57I	CTGAAG	1 cut(s)	1203
Eco88I	CYCGRG	3 cut(s)	88, 114, 314
EcoICRI	GAGCTC	1 cut(s)	53
EcoO109I	RGGNCCY	2 cut(s)	371, 1012
EcoRI	GAATTC	1 cut(s)	1440
EcoRII	CCWGG	2 cut(s)	355, 976
EcoRV	GATATC	1 cut(s)	453
EcoT14I	CCWWGG	2 cut(s)	367, 1015
EcoT38I	GRGCYC	2 cut(s)	55, 115
ErhI	CCWWGG	2 cut(s)	367, 1015
Esp3I	CGTCTC	2 cut(s)	111, 261
FaeI	CATG	1 cut(s)	988
FalI	AAGNNNNNCTT	2 cut(s)	804, 836
FaqI	GGGAC	2 cut(s)	45, 1129
FatI	CATG	1 cut(s)	984
FblI	GTMKAC	1 cut(s)	1101
FokI	GGATG	1 cut(s)	572
FriOI	GRGCYC	2 cut(s)	55, 115
FspBI	CTAG	6 cut(s)	462, 878, 923, 944, 1016, 1454
GlaI	GCGC	3 cut(s)	306, 333, 397
GsaI	CCCAGC	1 cut(s)	636
GsuI	CTGGAG	2 cut(s)	368, 870
HaeII	RGCGCY	3 cut(s)	308, 335, 399
HaeIII	GGCC	3 cut(s)	326, 372, 1091
HapII	CCGG	5 cut(s)	15, 323, 340, 1230, 1266
HgaI	GACGC	2 cut(s)	243, 947
HhaI	GCGC	3 cut(s)	307, 334, 398
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	1 cut(s)	988
Hin6I	GCGC	3 cut(s)	305, 332, 396
HinP1I	GCGC	3 cut(s)	305, 332, 396
HindIII	AAGCTT	2 cut(s)	401, 666
HpaII	CCGG	5 cut(s)	15, 323, 340, 1230, 1266
HphI	GGTGA	4 cut(s)	356, 427, 1318, 1445
Hpy166II	GTNNAC	4 cut(s)	364, 1102, 1189, 1357
Hpy188I	TCNGA	8 cut(s)	24, 747, 763, 787, 956, 1081, 1146, 1245
Hpy188III	TCNNGA	6 cut(s)	90, 294, 347, 595, 1154, 1454
Hpy8I	GTNNAC	4 cut(s)	364, 1102, 1189, 1357
Hpy99I	CGWCG	2 cut(s)	28, 66
HpyAV	CCTTC	3 cut(s)	198, 681, 892
HpyCH4III	ACNGT	6 cut(s)	28, 66, 572, 604, 1028, 1106
HpyCH4IV	ACGT	1 cut(s)	211
HpyCH4V	TGCA	6 cut(s)	141, 584, 875, 998, 1130, 1205
HpyF10VI	GCNNNNNNNGC	5 cut(s)	138, 378, 629, 740, 947
HpyF3I	CTNAG	2 cut(s)	292, 392
HpySE526I	ACGT	1 cut(s)	211
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	1 cut(s)	988
HspAI	GCGC	3 cut(s)	305, 332, 396
Kzo9I	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
LmnI	GCTCC	5 cut(s)	36, 50, 167, 339, 851
Lsp1109I	GCAGC	8 cut(s)	192, 296, 445, 459, 743, 934, 1394, 1417
LweI	GCATC	4 cut(s)	708, 730, 835, 862
MaeI	CTAG	6 cut(s)	462, 878, 923, 944, 1016, 1454
MaeII	ACGT	1 cut(s)	211
MaeIII	GTNAC	3 cut(s)	207, 572, 1058
MalI	GATC	7 cut(s)	226, 513, 651, 784, 1143, 1158, 1235
MbiI	CCGCTC	1 cut(s)	39
MboI	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
MflI	RGATCY	2 cut(s)	1156, 1233
MhlI	GDGCHC	2 cut(s)	55, 115
MlsI	TGGCCA	1 cut(s)	1091
MluCI	AATT	5 cut(s)	525, 543, 771, 1367, 1440
MluNI	TGGCCA	1 cut(s)	1091
MlyI	GAGTC	2 cut(s)	326, 1156
MmeI	TCCRAC	1 cut(s)	47
Mox20I	TGGCCA	1 cut(s)	1091
MroXI	GAANNNNTTC	1 cut(s)	902
MscI	TGGCCA	1 cut(s)	1091
MseI	TTAA	3 cut(s)	1005, 1362, 1419
Msp20I	TGGCCA	1 cut(s)	1091
MspA1I	CMGCKG	4 cut(s)	458, 1072, 1385, 1408
MspI	CCGG	5 cut(s)	15, 323, 340, 1230, 1266
MspR9I	CCNGG	3 cut(s)	357, 978, 1231
Mva1269I	GAATGC	2 cut(s)	586, 836
MvaI	CCWGG	2 cut(s)	357, 978
MwoI	GCNNNNNNNGC	5 cut(s)	138, 378, 629, 740, 947
NciI	CCSGG	1 cut(s)	1231
NdeII	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
NlaIII	CATG	1 cut(s)	988
NmuCI	GTSAC	1 cut(s)	207
NspI	RCATGY	1 cut(s)	988
PaeI	GCATGC	1 cut(s)	988
PaeR7I	CTCGAG	1 cut(s)	88
PctI	GAATGC	2 cut(s)	586, 836
PdmI	GAANNNNTTC	1 cut(s)	902
PfeI	GAWTC	9 cut(s)	277, 299, 343, 637, 788, 1220, 1254, 1311, 1323
PflMI	CCANNNNNTGG	1 cut(s)	1346
PfoI	TCCNGGA	1 cut(s)	1229
PleI	GAGTC	2 cut(s)	325, 1155
PpsI	GAGTC	2 cut(s)	325, 1155
PpuMI	RGGWCCY	1 cut(s)	1012
PsiI	TTATAA	1 cut(s)	1175
Psp124BI	GAGCTC	1 cut(s)	55
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	2 cut(s)	355, 976
PspFI	CCCAGC	1 cut(s)	632
PspGI	CCWGG	2 cut(s)	355, 976
PspPI	GGNCC	3 cut(s)	20, 371, 1012
PspPPI	RGGWCCY	1 cut(s)	1012
PstI	CTGCAG	1 cut(s)	143
PstNI	CAGNNNCTG	1 cut(s)	138
PsuI	RGATCY	2 cut(s)	1156, 1233
PvuII	CAGCTG	4 cut(s)	458, 1072, 1385, 1408
RsaI	GTAC	1 cut(s)	1190
RsaNI	GTAC	1 cut(s)	1189
SacI	GAGCTC	1 cut(s)	55
SaqAI	TTAA	3 cut(s)	1005, 1362, 1419
Sau3AI	GATC	7 cut(s)	224, 511, 649, 782, 1141, 1156, 1233
Sau96I	GGNCC	3 cut(s)	20, 371, 1012
SchI	GAGTC	2 cut(s)	326, 1156
ScrFI	CCNGG	3 cut(s)	357, 978, 1231
SduI	GDGCHC	2 cut(s)	55, 115
SfaNI	GCATC	4 cut(s)	708, 730, 835, 862
SfcI	CTRYAG	1 cut(s)	139
Sfr274I	CTCGAG	1 cut(s)	88
SinI	GGWCC	2 cut(s)	20, 1012
SlaI	CTCGAG	1 cut(s)	88
SmlI	CTYRAG	2 cut(s)	88, 1152
SmoI	CTYRAG	2 cut(s)	88, 1152
SphI	GCATGC	1 cut(s)	988
Sse9I	AATT	5 cut(s)	525, 543, 771, 1367, 1440
SsiI	CCGC	7 cut(s)	39, 308, 311, 337, 672, 721, 1048
SspMI	CTAG	6 cut(s)	462, 878, 923, 944, 1016, 1454
SstI	GAGCTC	1 cut(s)	55
StyD4I	CCNGG	3 cut(s)	355, 976, 1229
StyI	CCWWGG	2 cut(s)	367, 1015
TaaI	ACNGT	6 cut(s)	28, 66, 572, 604, 1028, 1106
TaiI	ACGT	1 cut(s)	214
TaqI	TCGA	5 cut(s)	55, 61, 89, 408, 449
TasI	AATT	5 cut(s)	525, 543, 771, 1367, 1440
TatI	WGTACW	1 cut(s)	1188
TauI	GCSGC	3 cut(s)	42, 310, 313
TfiI	GAWTC	9 cut(s)	277, 299, 343, 637, 788, 1220, 1254, 1311, 1323
Tru1I	TTAA	3 cut(s)	1005, 1362, 1419
Tru9I	TTAA	3 cut(s)	1005, 1362, 1419
TscAI	CASTG	4 cut(s)	148, 240, 445, 807
TseFI	GTSAC	1 cut(s)	207
TseI	GCWGC	8 cut(s)	180, 284, 458, 472, 731, 947, 1382, 1405
Tsp45I	GTSAC	1 cut(s)	207
TspDTI	ATGAA	7 cut(s)	206, 602, 856, 911, 1050, 1212, 1404
TspGWI	ACGGA	2 cut(s)	49, 1335
TspRI	CASTG	4 cut(s)	148, 240, 445, 807
Van91I	CCANNNNNTGG	1 cut(s)	1346
VpaK11BI	GGWCC	2 cut(s)	20, 1012
XapI	RAATTY	1 cut(s)	1440
XbaI	TCTAGA	1 cut(s)	1453
XceI	RCATGY	1 cut(s)	988
XhoI	CTCGAG	1 cut(s)	88
XmaJI	CCTAGG	1 cut(s)	1015
XmiI	GTMKAC	1 cut(s)	1101
XmnI	GAANNNNTTC	1 cut(s)	902
XspI	CTAG	6 cut(s)	462, 878, 923, 944, 1016, 1454

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.