RLG00000008634

Phosphoenolpyruvate phosphomutase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
33835183 .. 33840218
5036 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008634

Sequence Viewer

Length: 1494 bp
ATGAGTTGTGTGCTGCAGAAGCAGTATCCTCAGGTGGGTAGCAGAGACTGCAGTGTGTCTCTTCCCCACAGCTCCTGTTTCAATGTCAGCAGCTCGCCTTCAAACCTTACATTCGGGTCGCGTCTTCATCAACGATCACTAACACTGCCCCACAAGTCAAATGCGTCTCCTTTTCTTACCACAAGGATCCTCGCAGCTTACTCAGGAGAATCAGCGCCGCCGCCCGAGTCTCCGGCCAAAGCGCTCCGCCGGATTCTGGAGTTGCCAGGGGTTCACCAAGGCCCTGCTTGCTTTGATGGTCTCAGCGCCAAGCTTGTCGAAAGAGCTGGCTTCCAGTATTGCTTCACCAGTGGATTTTCGATATCAGCTGCTAGATTAGGGCTGCCAGATACAGGTTTTCTATCCTATGGAGAAATGGTGGATCAGGGGCAACAAATTACCCAAGCTGTGTCAATTCCTGTCATTGGGGATGGCGATAACGGTTACGGGAATGCAATGAATGTCAAGAGAACTGTCAAGGGATATATTAGAGCTGGCTTTGCTGGGATTCTGCTTGAAGATCAGGTGTCTCCAAAAGCCTGCGGTCATACACAAGGCAGGAAAGTGGTGTCAAGGGAGGAAGCTGTGATGCGGATAAAAGCAGCAGTTGATGCTCGGAAAGAGAGTGGCTCTGACATTGTAATTGTAGCACGATCTGATTCTCGTCAAGCAGTGTCTTTGGAAGAAGCACTTTGGAGGTCAAGGGCATTCGCTGATGCTGGAGCAGATGTTCTTTTCATTGATGCACTAGCCTCAAAAGAAGAAATGAAGGCTTTCTGTGGAGTATATCCCCTAGTTCCAAAAATGGCGAATATGCTTGAAGGAGGGGGAAAAACACCAATACTCAATCCTCTTGAACTTGAGGAAGTTGGATACAAACTTGTGGCTTATCCACTTTCCTTGATTGGGGTATCTATTCAAGCAATGCAGGACGCACTAGCTGCTATCAGAGGAGGTCGTATCCCTCCACCTAGAAGCATGCCATCTTTTGAAGAGGTTAAGGAGGTCCTAGGTTTCAACAGTTATTATGAAGAAGAAAAGCGGTATTATAGTAACAGCAGTCAGCTGTCTTCTGAAAGATTGGCCAGTAGTGTATACAGTCTTCAAGGGACATCTAAAAATGCAGAACCAAAAGATCAGAGTCCTCAAGATCCCATTGTTGAAGTTGTAACACCTGAAGTGTACAATAACTATGGTGCAGATGGTTTCAAGGATTCATTTTCTGGGATCTGGTCTCGGAAGTTGAGAATCAAAATAACTGGAAGAGATGGATTTGAGAAACTTGATGTTAGTATTCCTGCTGGATTCTTGGACGGAATCACCAATATAGTTCCAGCTCTTGGGGGTGTAAACATCAAAGAATTGTTGAATGAGGCAGCTGATGAAATGGGAGGGAAGCAGCTGTTAGATTTTAATGACACAATGGGTGATAGAATTCAAGTTTTTCTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

498

Amino Acids

53.74

Weight (kDa)

5.78

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PEP_mutase PF13714 95 - 329 3e-45 Phosphoenolpyruvate phosphomutase
ICL PF00463 152 - 239 1.2e-12 Isocitrate lyase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1379
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 1 cut(s) 121
AciI CCGC 6 cut(s) 218, 221, 247, 582, 631, 1081
AclWI GGATC 5 cut(s) 181, 194, 429, 1184, 1274
AcoI YGGCCR 2 cut(s) 234, 1122
AcsI RAATTY 1 cut(s) 1473
AcuI CTGAAG 1 cut(s) 1236
AfaI GTAC 1 cut(s) 1223
AfeI AGCGCT 1 cut(s) 243
AfiI CCNNNNNNNGG 6 cut(s) 35, 256, 392, 464, 945, 1379
AjnI CCWGG 1 cut(s) 265
AloI GAACNNNNNNTCC 2 cut(s) 753, 785
Alw26I GTCTC 7 cut(s) 39, 63, 171, 234, 305, 573, 1278
AlwI GGATC 5 cut(s) 181, 194, 429, 1184, 1274
AlwNI CAGNNNCTG 2 cut(s) 48, 75
Ama87I CYCGRG 1 cut(s) 224
Aor51HI AGCGCT 1 cut(s) 243
AoxI GGCC 3 cut(s) 234, 280, 1122
ApeKI GCWGC 9 cut(s) 13, 90, 194, 368, 382, 641, 980, 1415, 1438
ApoI RAATTY 1 cut(s) 1473
Asp700I GAANNNNTTC 1 cut(s) 812
AspA2I CCTAGG 1 cut(s) 1048
AspLEI GCGC 3 cut(s) 217, 244, 308
AspS9I GGNCC 2 cut(s) 281, 1045
AsuHPI GGTGA 4 cut(s) 266, 337, 1351, 1478
AvaI CYCGRG 1 cut(s) 224
AvaII GGWCC 1 cut(s) 1045
AvrII CCTAGG 1 cut(s) 1048
AxyI CCTNAGG 1 cut(s) 30
BalI TGGCCA 1 cut(s) 1124
BamHI GGATCC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 1125, 1157
BbsI GAAGAC 3 cut(s) 116, 1101, 1133
BbvI GCAGC 8 cut(s) 102, 206, 355, 369, 653, 967, 1427, 1450
BccI CCATC 5 cut(s) 290, 464, 1030, 1235, 1301
BciT130I CCWGG 1 cut(s) 267
BciVI GTATCC 3 cut(s) 36, 905, 1010
BcoDI GTCTC 7 cut(s) 39, 63, 171, 234, 305, 573, 1278
BfaI CTAG 7 cut(s) 372, 788, 833, 977, 1011, 1049, 1487
BfmI CTRYAG 2 cut(s) 14, 49
BfoI RGCGCY 3 cut(s) 218, 245, 309
BfuI GTATCC 3 cut(s) 36, 905, 1010
BlnI CCTAGG 1 cut(s) 1048
Bme1390I CCNGG 1 cut(s) 267
Bme18I GGWCC 1 cut(s) 1045
BmeT110I CYCGRG 1 cut(s) 224
BmgT120I GGNCC 2 cut(s) 281, 1045
BmiI GGNNCC 1 cut(s) 188
BmrFI CCNGG 1 cut(s) 267
BmsI GCATC 4 cut(s) 618, 640, 745, 772
BpiI GAAGAC 3 cut(s) 116, 1101, 1133
BplI GAGNNNNNCTC 2 cut(s) 653, 685
BpmI CTGGAG 2 cut(s) 278, 780
BpuEI CTTGAG 2 cut(s) 920, 1170
BsaI GGTCTC 2 cut(s) 305, 1278
BsaJI CCNNGG 3 cut(s) 266, 277, 1048
BsaXI ACNNNNNCTCC 4 cut(s) 402, 432, 753, 783
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 256, 392, 464, 945, 1379
Bse1I ACTGG 4 cut(s) 334, 348, 1125, 1303
Bse21I CCTNAGG 1 cut(s) 30
Bse3DI GCAATG 2 cut(s) 501, 969
BseBI CCWGG 1 cut(s) 267
BseDI CCNNGG 3 cut(s) 266, 277, 1048
BseGI GGATG 1 cut(s) 475
BseLI CCNNNNNNNGG 6 cut(s) 35, 256, 392, 464, 945, 1379
BseMI GCAATG 2 cut(s) 501, 969
BseMII CTCAG 3 cut(s) 44, 216, 316
BseNI ACTGG 4 cut(s) 334, 348, 1125, 1303
BseRI GAGGAG 1 cut(s) 1005
BseXI GCAGC 8 cut(s) 102, 206, 355, 369, 653, 967, 1427, 1450
BseYI CCCAGC 1 cut(s) 542
BsgI GTGCAG 1 cut(s) 1257
Bsh1236I CGCG 1 cut(s) 121
BshFI GGCC 3 cut(s) 236, 282, 1124
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 2 cut(s) 233, 250
BslFI GGGAC 1 cut(s) 1162
BslI CCNNNNNNNGG 6 cut(s) 35, 256, 392, 464, 945, 1379
BsmAI GTCTC 7 cut(s) 39, 63, 171, 234, 305, 573, 1278
BsmBI CGTCTC 1 cut(s) 171
BsmFI GGGAC 1 cut(s) 1162
BsmI GAATGC 2 cut(s) 496, 746
BsnI GGCC 3 cut(s) 236, 282, 1124
Bso31I GGTCTC 2 cut(s) 305, 1278
BsoBI CYCGRG 1 cut(s) 224
Bsp1407I TGTACA 1 cut(s) 1221
Bsp143I GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
BspACI CCGC 6 cut(s) 218, 221, 247, 582, 631, 1081
BspANI GGCC 3 cut(s) 236, 282, 1124
BspCNI CTCAG 3 cut(s) 43, 215, 315
BspFNI CGCG 1 cut(s) 121
BspLI GGNNCC 1 cut(s) 188
BspMAI CTGCAG 2 cut(s) 18, 53
BspPI GGATC 5 cut(s) 181, 194, 429, 1184, 1274
BspTNI GGTCTC 2 cut(s) 305, 1278
BsrDI GCAATG 2 cut(s) 501, 969
BsrGI TGTACA 1 cut(s) 1221
BsrI ACTGG 4 cut(s) 334, 348, 1125, 1303
BssECI CCNNGG 3 cut(s) 266, 277, 1048
BssMI GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
BssNAI GTATAC 1 cut(s) 1135
BssT1I CCWWGG 2 cut(s) 277, 1048
Bst1107I GTATAC 1 cut(s) 1135
Bst2UI CCWGG 1 cut(s) 267
Bst4CI ACNGT 4 cut(s) 482, 514, 1061, 1139
Bst6I CTCTTC 3 cut(s) 66, 1026, 1297
BstAPI GCANNNNNTGC 3 cut(s) 48, 650, 980
BstAUI TGTACA 1 cut(s) 1221
BstC8I GCNNGC 6 cut(s) 95, 289, 328, 535, 580, 1019
BstDEI CTNAG 3 cut(s) 30, 202, 302
BstF5I GGATG 1 cut(s) 475
BstFNI CGCG 1 cut(s) 121
BstH2I RGCGCY 3 cut(s) 218, 245, 309
BstHHI GCGC 3 cut(s) 217, 244, 308
BstKTI GATC 8 cut(s) 137, 189, 424, 562, 695, 1177, 1192, 1269
BstMAI GTCTC 7 cut(s) 39, 63, 171, 234, 305, 573, 1278
BstMBI GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
BstMWI GCNNNNNNNGC 6 cut(s) 19, 48, 288, 539, 650, 980
BstNI CCWGG 1 cut(s) 267
BstNSI RCATGY 1 cut(s) 1021
BstSCI CCNGG 1 cut(s) 265
BstSFI CTRYAG 2 cut(s) 14, 49
BstUI CGCG 1 cut(s) 121
BstV1I GCAGC 8 cut(s) 102, 206, 355, 369, 653, 967, 1427, 1450
BstV2I GAAGAC 3 cut(s) 116, 1101, 1133
BstX2I RGATCY 3 cut(s) 186, 1189, 1266
BstYI RGATCY 3 cut(s) 186, 1189, 1266
BstZ17I GTATAC 1 cut(s) 1135
Bsu36I CCTNAGG 1 cut(s) 30
BsuI GTATCC 3 cut(s) 36, 905, 1010
BsuRI GGCC 3 cut(s) 236, 282, 1124
BtsCI GGATG 1 cut(s) 475
BtsI GCAGTG 3 cut(s) 58, 143, 717
BtsIMutI CAGTG 4 cut(s) 58, 143, 355, 717
Cac8I GCNNGC 6 cut(s) 95, 289, 328, 535, 580, 1019
CaiI CAGNNNCTG 2 cut(s) 48, 75
CfoI GCGC 3 cut(s) 217, 244, 308
Cfr13I GGNCC 2 cut(s) 281, 1045
CseI GACGC 3 cut(s) 110, 153, 980
Csp6I GTAC 1 cut(s) 1222
CspCI CAANNNNNGTGG 2 cut(s) 921, 956
CviAII CATG 1 cut(s) 1018
CviQI GTAC 1 cut(s) 1222
DdeI CTNAG 3 cut(s) 30, 202, 302
DpnI GATC 8 cut(s) 136, 188, 423, 561, 694, 1176, 1191, 1268
DpnII GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
EaeI YGGCCR 2 cut(s) 234, 1122
Eam1104I CTCTTC 3 cut(s) 66, 1026, 1297
EarI CTCTTC 3 cut(s) 66, 1026, 1297
EciI GGCGGA 1 cut(s) 236
Eco130I CCWWGG 2 cut(s) 277, 1048
Eco31I GGTCTC 2 cut(s) 305, 1278
Eco32I GATATC 1 cut(s) 363
Eco47I GGWCC 1 cut(s) 1045
Eco47III AGCGCT 1 cut(s) 243
Eco57I CTGAAG 1 cut(s) 1236
Eco81I CCTNAGG 1 cut(s) 30
Eco88I CYCGRG 1 cut(s) 224
EcoO109I RGGNCCY 2 cut(s) 281, 1045
EcoRI GAATTC 1 cut(s) 1473
EcoRII CCWGG 1 cut(s) 265
EcoRV GATATC 1 cut(s) 363
EcoT14I CCWWGG 2 cut(s) 277, 1048
ErhI CCWWGG 2 cut(s) 277, 1048
Esp3I CGTCTC 1 cut(s) 171
FaeI CATG 1 cut(s) 1021
FalI AAGNNNNNCTT 2 cut(s) 714, 746
FaqI GGGAC 1 cut(s) 1162
FatI CATG 1 cut(s) 1017
FblI GTMKAC 1 cut(s) 1134
FokI GGATG 1 cut(s) 482
FspBI CTAG 7 cut(s) 372, 788, 833, 977, 1011, 1049, 1487
GlaI GCGC 3 cut(s) 216, 243, 307
GsaI CCCAGC 1 cut(s) 546
GsuI CTGGAG 2 cut(s) 278, 780
HaeII RGCGCY 3 cut(s) 218, 245, 309
HaeIII GGCC 3 cut(s) 236, 282, 1124
HapII CCGG 2 cut(s) 233, 250
HgaI GACGC 3 cut(s) 110, 153, 980
HhaI GCGC 3 cut(s) 217, 244, 308
Hin1II CATG 1 cut(s) 1021
Hin6I GCGC 3 cut(s) 215, 242, 306
HinP1I GCGC 3 cut(s) 215, 242, 306
HindIII AAGCTT 1 cut(s) 311
HpaII CCGG 2 cut(s) 233, 250
HphI GGTGA 4 cut(s) 266, 337, 1351, 1478
Hpy166II GTNNAC 4 cut(s) 274, 1135, 1222, 1390
Hpy188I TCNGA 7 cut(s) 657, 673, 697, 989, 1114, 1179, 1278
Hpy188III TCNNGA 6 cut(s) 204, 257, 505, 893, 1187, 1487
Hpy8I GTNNAC 4 cut(s) 274, 1135, 1222, 1390
HpyAV CCTTC 3 cut(s) 108, 802, 854
HpyCH4III ACNGT 4 cut(s) 482, 514, 1061, 1139
HpyCH4V TGCA 7 cut(s) 16, 51, 494, 785, 967, 1163, 1238
HpyF10VI GCNNNNNNNGC 6 cut(s) 19, 48, 288, 539, 650, 980
HpyF3I CTNAG 3 cut(s) 30, 202, 302
Hsp92II CATG 1 cut(s) 1021
HspAI GCGC 3 cut(s) 215, 242, 306
Kzo9I GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
LmnI GCTCC 3 cut(s) 77, 249, 761
Lsp1109I GCAGC 8 cut(s) 102, 206, 355, 369, 653, 967, 1427, 1450
LweI GCATC 4 cut(s) 618, 640, 745, 772
MaeI CTAG 7 cut(s) 372, 788, 833, 977, 1011, 1049, 1487
MaeIII GTNAC 3 cut(s) 482, 1091, 1207
MalI GATC 8 cut(s) 136, 188, 423, 561, 694, 1176, 1191, 1268
MboI GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
MflI RGATCY 3 cut(s) 186, 1189, 1266
MlsI TGGCCA 1 cut(s) 1124
MluCI AATT 5 cut(s) 435, 453, 681, 1400, 1473
MluNI TGGCCA 1 cut(s) 1124
MlyI GAGTC 2 cut(s) 236, 1189
MmeI TCCRAC 1 cut(s) 889
Mox20I TGGCCA 1 cut(s) 1124
MroXI GAANNNNTTC 1 cut(s) 812
MscI TGGCCA 1 cut(s) 1124
MseI TTAA 2 cut(s) 1038, 1452
Msp20I TGGCCA 1 cut(s) 1124
MspA1I CMGCKG 4 cut(s) 368, 1105, 1418, 1441
MspI CCGG 2 cut(s) 233, 250
MspR9I CCNGG 1 cut(s) 267
Mva1269I GAATGC 2 cut(s) 496, 746
MvaI CCWGG 1 cut(s) 267
MvnI CGCG 1 cut(s) 121
MwoI GCNNNNNNNGC 6 cut(s) 19, 48, 288, 539, 650, 980
NdeII GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
NlaIII CATG 1 cut(s) 1021
NlaIV GGNNCC 1 cut(s) 188
NspI RCATGY 1 cut(s) 1021
PaeI GCATGC 1 cut(s) 1021
PctI GAATGC 2 cut(s) 496, 746
PdmI GAANNNNTTC 1 cut(s) 812
PfeI GAWTC 8 cut(s) 209, 253, 547, 698, 1253, 1287, 1344, 1356
PflMI CCANNNNNTGG 1 cut(s) 1379
PleI GAGTC 2 cut(s) 235, 1188
PpsI GAGTC 2 cut(s) 235, 1188
PpuMI RGGWCCY 1 cut(s) 1045
Psp5II RGGWCCY 1 cut(s) 1045
Psp6I CCWGG 1 cut(s) 265
PspFI CCCAGC 1 cut(s) 542
PspGI CCWGG 1 cut(s) 265
PspN4I GGNNCC 1 cut(s) 188
PspPI GGNCC 2 cut(s) 281, 1045
PspPPI RGGWCCY 1 cut(s) 1045
PstI CTGCAG 2 cut(s) 18, 53
PstNI CAGNNNCTG 2 cut(s) 48, 75
PsuI RGATCY 3 cut(s) 186, 1189, 1266
PvuII CAGCTG 4 cut(s) 368, 1105, 1418, 1441
RsaI GTAC 1 cut(s) 1223
RsaNI GTAC 1 cut(s) 1222
SaqAI TTAA 2 cut(s) 1038, 1452
Sau3AI GATC 8 cut(s) 134, 186, 421, 559, 692, 1174, 1189, 1266
Sau96I GGNCC 2 cut(s) 281, 1045
SchI GAGTC 2 cut(s) 236, 1189
ScrFI CCNGG 1 cut(s) 267
SfaNI GCATC 4 cut(s) 618, 640, 745, 772
SfcI CTRYAG 2 cut(s) 14, 49
SinI GGWCC 1 cut(s) 1045
SmlI CTYRAG 2 cut(s) 899, 1185
SmoI CTYRAG 2 cut(s) 899, 1185
SphI GCATGC 1 cut(s) 1021
Sse9I AATT 5 cut(s) 435, 453, 681, 1400, 1473
SsiI CCGC 6 cut(s) 218, 221, 247, 582, 631, 1081
SspMI CTAG 7 cut(s) 372, 788, 833, 977, 1011, 1049, 1487
StyD4I CCNGG 1 cut(s) 265
StyI CCWWGG 2 cut(s) 277, 1048
TaaI ACNGT 4 cut(s) 482, 514, 1061, 1139
TaqI TCGA 2 cut(s) 318, 359
TasI AATT 5 cut(s) 435, 453, 681, 1400, 1473
TatI WGTACW 1 cut(s) 1221
TauI GCSGC 2 cut(s) 220, 223
TfiI GAWTC 8 cut(s) 209, 253, 547, 698, 1253, 1287, 1344, 1356
Tru1I TTAA 2 cut(s) 1038, 1452
Tru9I TTAA 2 cut(s) 1038, 1452
TscAI CASTG 4 cut(s) 58, 150, 355, 717
TseI GCWGC 9 cut(s) 13, 90, 194, 368, 382, 641, 980, 1415, 1438
TspDTI ATGAA 7 cut(s) 116, 512, 766, 821, 1083, 1245, 1437
TspGWI ACGGA 1 cut(s) 1368
TspRI CASTG 4 cut(s) 58, 150, 355, 717
Van91I CCANNNNNTGG 1 cut(s) 1379
VpaK11BI GGWCC 1 cut(s) 1045
XapI RAATTY 1 cut(s) 1473
XbaI TCTAGA 1 cut(s) 1486
XceI RCATGY 1 cut(s) 1021
XmaJI CCTAGG 1 cut(s) 1048
XmiI GTMKAC 1 cut(s) 1134
XmnI GAANNNNTTC 1 cut(s) 812
XspI CTAG 7 cut(s) 372, 788, 833, 977, 1011, 1049, 1487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.