Rh1DG149900

Phosphoenolpyruvate phosphomutase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
31418591 .. 31424097
5507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG149900.1

Sequence Viewer

Length: 1464 bp
ATGAGTTGTGTGCTGCAGCAGCAGTATCCTCAGGTGGGTAGCAGAGACTGCAGCTCCTGTTTCAATGTCAGCAGCTCGCCTTCAAACCTTACATTCGGGTCACGTCTTCATCAACGATCACTAACACTGCCCCACAAGTCAAATGCGTCTCCTTTTCGTACCACAAGGATCCTCGCAGCTTACTCAGGAGACTCAGCGCCGCCGCCCGAGTCTCCGGCCAAAGCGCTTCGCCGGATTCTGGAGTTGCCGGGGGTTCACCAAGGCCCTGCTTGCTTTGATGGTCTCAGCGCCAAGCTTGTCGAAAGAGCTGGCTTCCAGTATTGCTTCACCAGTGGATTTTCGATATCAGCAGCTAGATTAGGGCTGCCAGATACAGGTTTTCTATCCTACGGAGAAATGGTGGATCAGGGGCAACAAATTACCCAAGCTGTGTCAATTCCTGTCATTGGGGATGGCGATAATGGTTACGGGAATGCAATGAATGTCAAGAGAACTGTCAAGGGATATATAAGAGCTGGCTTTGCTGGGATTCTGCTTGAAGATCAGGTGTCTCCAAAAGCCTGCGGTCATACACAAGGCAGGAAAGTGGTGTCAAGGGAGGAAGCTGTGATGCGGATAAAAGCAGCAGTTGATGCTCGGAAAGAGAGTGGCTCTGACATTGTAATTGTAGCACGATCTGATTCTCGTCAAGCAGTGTCTTTGGAAGAAGCACTTTGGAGGTCAAGGGCATTCGCTGATGCTGGAGCAGATGTTCTTTTCATTGATGCACTAGCCTCAAAAGAAGAAATGAAGGCTTTCTGTGGAGTCTATCCCCTAGTTCCAAAAATGGCAAATATGCTTGAAGGAGGGGGAAAAACACCAATACTCAATCCTCTTGAACTTGAGGAAGTTGGATACAAACTTGTGGCTTATCCACTTTCCTTGATTGGGGTATCTATTCAAGCAATGCAGGACGCACTAGCTGCTATCAGAGGAGGTCGTATCCCTCCACCTGGAAGCATGCCATCTTTTGAAGAGGTTAAGGAGGTCCTAGGTTTCAACAGTTATTATGAAGAAGAAAAGCGGTATTATAGTAACAGCAGTCAGCTGTCTTCTGAAAGATTGGCCAGTAGTGTATACAGTCTTCAAGGGACATCTAAAAATGCAGAACCAAATGATCAGAGTCCTCAAGATCCCATTGTTGAAGTTATAACACCTGAAGTGTACAATAACTATGGTGCTGATGGTTTCAAGGATTCATTTTCTGGGATCTGGTCTCGGAAATTGAGAATCAAAATAACTGGAAGAGATGGATTTGAGAAACTTGATGTTAGAATTCCTTTTGAAGTTTGCATGCTTCAACCCCTGGCAAAGCCTCAACATGCGCTGGAGAGTAGACCTGAGAAAACACTAATACCTAAGCCCCATATCAAAGACATCACGGACTACAACACCAATGCCCCCCCTAACGCTCGTCTTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

487

Amino Acids

53.03

Weight (kDa)

7.56

Isoelectric Point (pI)

50.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PEP_mutase PF13714 89 - 323 2.8e-45 Phosphoenolpyruvate phosphomutase
ICL PF00463 146 - 233 1.2e-12 Isocitrate lyase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1190
AccI GTMKAC 2 cut(s) 1116, 1375
AciI CCGC 5 cut(s) 200, 203, 564, 613, 1063
AclWI GGATC 5 cut(s) 163, 176, 411, 1166, 1256
AcoI YGGCCR 2 cut(s) 216, 1104
AcsI RAATTY 1 cut(s) 1314
AcuI CTGAAG 1 cut(s) 1218
AfaI GTAC 2 cut(s) 160, 1205
AfeI AGCGCT 1 cut(s) 225
AfiI CCNNNNNNNGG 6 cut(s) 35, 238, 374, 446, 927, 992
AjiI CACGTC 1 cut(s) 104
AjnI CCWGG 2 cut(s) 991, 1344
AloI GAACNNNNNNTCC 2 cut(s) 735, 767
Alw26I GTCTC 7 cut(s) 39, 153, 183, 216, 287, 555, 1260
AlwI GGATC 5 cut(s) 163, 176, 411, 1166, 1256
AlwNI CAGNNNCTG 2 cut(s) 48, 57
Ama87I CYCGRG 1 cut(s) 206
Aor51HI AGCGCT 1 cut(s) 225
AoxI GGCC 3 cut(s) 216, 262, 1104
ApoI RAATTY 1 cut(s) 1314
Asp700I GAANNNNTTC 1 cut(s) 794
AspA2I CCTAGG 1 cut(s) 1030
AspLEI GCGC 4 cut(s) 199, 226, 290, 1366
AspS9I GGNCC 2 cut(s) 263, 1027
AsuC2I CCSGG 1 cut(s) 249
AsuHPI GGTGA 2 cut(s) 248, 319
AvaI CYCGRG 1 cut(s) 206
AvaII GGWCC 1 cut(s) 1027
AvrII CCTAGG 1 cut(s) 1030
AxyI CCTNAGG 1 cut(s) 30
BalI TGGCCA 1 cut(s) 1106
BamHI GGATCC 1 cut(s) 168
BarI GAAGNNNNNNTAC 2 cut(s) 1107, 1139
BbsI GAAGAC 4 cut(s) 98, 1083, 1115, 1448
BbvI GCAGC 9 cut(s) 28, 31, 63, 84, 188, 351, 362, 635, 949
BccI CCATC 5 cut(s) 272, 446, 1012, 1217, 1283
BciT130I CCWGG 2 cut(s) 993, 1346
BciVI GTATCC 3 cut(s) 36, 887, 992
BclI TGATCA 1 cut(s) 1156
BcnI CCSGG 1 cut(s) 249
BcoDI GTCTC 7 cut(s) 39, 153, 183, 216, 287, 555, 1260
BfaI CTAG 5 cut(s) 354, 770, 815, 959, 1031
BfmI CTRYAG 2 cut(s) 14, 49
BfoI RGCGCY 3 cut(s) 200, 227, 291
BfuI GTATCC 3 cut(s) 36, 887, 992
BlnI CCTAGG 1 cut(s) 1030
Bme1390I CCNGG 3 cut(s) 249, 993, 1346
Bme18I GGWCC 1 cut(s) 1027
BmeT110I CYCGRG 1 cut(s) 206
BmgBI CACGTC 1 cut(s) 104
BmgT120I GGNCC 2 cut(s) 263, 1027
BmiI GGNNCC 1 cut(s) 170
BmrFI CCNGG 3 cut(s) 249, 993, 1346
BmsI GCATC 4 cut(s) 600, 622, 727, 754
BpiI GAAGAC 4 cut(s) 98, 1083, 1115, 1448
BplI GAGNNNNNCTC 2 cut(s) 635, 667
BpmI CTGGAG 3 cut(s) 260, 762, 1388
Bpu10I CCTNAGC 1 cut(s) 1398
BpuEI CTTGAG 2 cut(s) 902, 1152
BpuMI CCSGG 1 cut(s) 249
BsaI GGTCTC 2 cut(s) 287, 1260
BsaJI CCNNGG 4 cut(s) 248, 259, 1030, 1344
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 384, 414, 735, 765
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 238, 374, 446, 927, 992
Bse1I ACTGG 4 cut(s) 316, 330, 1107, 1285
Bse21I CCTNAGG 1 cut(s) 30
Bse3DI GCAATG 2 cut(s) 483, 951
BseBI CCWGG 2 cut(s) 993, 1346
BseDI CCNNGG 4 cut(s) 248, 259, 1030, 1344
BseGI GGATG 1 cut(s) 457
BseLI CCNNNNNNNGG 6 cut(s) 35, 238, 374, 446, 927, 992
BseMI GCAATG 2 cut(s) 483, 951
BseMII CTCAG 5 cut(s) 44, 198, 207, 298, 1371
BseNI ACTGG 4 cut(s) 316, 330, 1107, 1285
BseRI GAGGAG 1 cut(s) 987
BseXI GCAGC 9 cut(s) 28, 31, 63, 84, 188, 351, 362, 635, 949
BseYI CCCAGC 1 cut(s) 524
BshFI GGCC 3 cut(s) 218, 264, 1106
BsiHKCI CYCGRG 1 cut(s) 206
BsiSI CCGG 3 cut(s) 215, 232, 248
BslFI GGGAC 1 cut(s) 1144
BslI CCNNNNNNNGG 6 cut(s) 35, 238, 374, 446, 927, 992
BsmAI GTCTC 7 cut(s) 39, 153, 183, 216, 287, 555, 1260
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 1144
BsmI GAATGC 2 cut(s) 478, 728
BsnI GGCC 3 cut(s) 218, 264, 1106
Bso31I GGTCTC 2 cut(s) 287, 1260
BsoBI CYCGRG 1 cut(s) 206
Bsp1407I TGTACA 1 cut(s) 1203
Bsp143I GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
BspACI CCGC 5 cut(s) 200, 203, 564, 613, 1063
BspANI GGCC 3 cut(s) 218, 264, 1106
BspCNI CTCAG 5 cut(s) 43, 197, 206, 297, 1372
BspLI GGNNCC 1 cut(s) 170
BspMAI CTGCAG 2 cut(s) 18, 53
BspPI GGATC 5 cut(s) 163, 176, 411, 1166, 1256
BspTNI GGTCTC 2 cut(s) 287, 1260
BsrDI GCAATG 2 cut(s) 483, 951
BsrGI TGTACA 1 cut(s) 1203
BsrI ACTGG 4 cut(s) 316, 330, 1107, 1285
BssECI CCNNGG 4 cut(s) 248, 259, 1030, 1344
BssMI GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
BssNAI GTATAC 1 cut(s) 1117
BssT1I CCWWGG 2 cut(s) 259, 1030
Bst1107I GTATAC 1 cut(s) 1117
Bst2UI CCWGG 2 cut(s) 993, 1346
Bst4CI ACNGT 3 cut(s) 496, 1043, 1121
Bst6I CTCTTC 2 cut(s) 1008, 1279
BstAPI GCANNNNNTGC 3 cut(s) 48, 632, 962
BstAUI TGTACA 1 cut(s) 1203
BstC8I GCNNGC 7 cut(s) 77, 271, 310, 517, 562, 1001, 1334
BstDEI CTNAG 6 cut(s) 30, 184, 193, 284, 1380, 1398
BstF5I GGATG 1 cut(s) 457
BstH2I RGCGCY 3 cut(s) 200, 227, 291
BstHHI GCGC 4 cut(s) 199, 226, 290, 1366
BstKTI GATC 8 cut(s) 119, 171, 406, 544, 677, 1159, 1174, 1251
BstMAI GTCTC 7 cut(s) 39, 153, 183, 216, 287, 555, 1260
BstMBI GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
BstMWI GCNNNNNNNGC 6 cut(s) 19, 48, 270, 521, 632, 962
BstNI CCWGG 2 cut(s) 993, 1346
BstNSI RCATGY 3 cut(s) 1003, 1336, 1364
BstSCI CCNGG 3 cut(s) 247, 991, 1344
BstSFI CTRYAG 2 cut(s) 14, 49
BstV1I GCAGC 9 cut(s) 28, 31, 63, 84, 188, 351, 362, 635, 949
BstV2I GAAGAC 4 cut(s) 98, 1083, 1115, 1448
BstX2I RGATCY 3 cut(s) 168, 1171, 1248
BstYI RGATCY 3 cut(s) 168, 1171, 1248
BstZ17I GTATAC 1 cut(s) 1117
Bsu36I CCTNAGG 1 cut(s) 30
BsuI GTATCC 3 cut(s) 36, 887, 992
BsuRI GGCC 3 cut(s) 218, 264, 1106
BtrI CACGTC 1 cut(s) 104
BtsCI GGATG 1 cut(s) 457
BtsI GCAGTG 2 cut(s) 125, 699
BtsIMutI CAGTG 3 cut(s) 125, 337, 699
Cac8I GCNNGC 7 cut(s) 77, 271, 310, 517, 562, 1001, 1334
CaiI CAGNNNCTG 2 cut(s) 48, 57
CfoI GCGC 4 cut(s) 199, 226, 290, 1366
Cfr13I GGNCC 2 cut(s) 263, 1027
CseI GACGC 2 cut(s) 135, 962
Csp6I GTAC 2 cut(s) 159, 1204
CspCI CAANNNNNGTGG 2 cut(s) 903, 938
CviAII CATG 3 cut(s) 1000, 1333, 1361
CviQI GTAC 2 cut(s) 159, 1204
DdeI CTNAG 6 cut(s) 30, 184, 193, 284, 1380, 1398
DpnI GATC 8 cut(s) 118, 170, 405, 543, 676, 1158, 1173, 1250
DpnII GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
EaeI YGGCCR 2 cut(s) 216, 1104
Eam1104I CTCTTC 2 cut(s) 1008, 1279
EarI CTCTTC 2 cut(s) 1008, 1279
Eco130I CCWWGG 2 cut(s) 259, 1030
Eco31I GGTCTC 2 cut(s) 287, 1260
Eco32I GATATC 1 cut(s) 345
Eco47I GGWCC 1 cut(s) 1027
Eco47III AGCGCT 1 cut(s) 225
Eco57I CTGAAG 1 cut(s) 1218
Eco81I CCTNAGG 1 cut(s) 30
Eco88I CYCGRG 1 cut(s) 206
EcoO109I RGGNCCY 2 cut(s) 263, 1027
EcoRI GAATTC 1 cut(s) 1314
EcoRII CCWGG 2 cut(s) 991, 1344
EcoRV GATATC 1 cut(s) 345
EcoT14I CCWWGG 2 cut(s) 259, 1030
ErhI CCWWGG 2 cut(s) 259, 1030
Esp3I CGTCTC 1 cut(s) 153
FaeI CATG 3 cut(s) 1003, 1336, 1364
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FaqI GGGAC 1 cut(s) 1144
FatI CATG 3 cut(s) 999, 1332, 1360
FbaI TGATCA 1 cut(s) 1156
FblI GTMKAC 2 cut(s) 1116, 1375
FokI GGATG 1 cut(s) 464
FspBI CTAG 5 cut(s) 354, 770, 815, 959, 1031
GlaI GCGC 4 cut(s) 198, 225, 289, 1365
GsaI CCCAGC 1 cut(s) 528
GsuI CTGGAG 3 cut(s) 260, 762, 1388
HaeII RGCGCY 3 cut(s) 200, 227, 291
HaeIII GGCC 3 cut(s) 218, 264, 1106
HapII CCGG 3 cut(s) 215, 232, 248
HgaI GACGC 2 cut(s) 135, 962
HhaI GCGC 4 cut(s) 199, 226, 290, 1366
Hin1II CATG 3 cut(s) 1003, 1336, 1364
Hin6I GCGC 4 cut(s) 197, 224, 288, 1364
HinP1I GCGC 4 cut(s) 197, 224, 288, 1364
HindIII AAGCTT 1 cut(s) 293
HinfI GANTC 9 cut(s) 191, 209, 235, 529, 680, 804, 1162, 1235, 1269
HpaII CCGG 3 cut(s) 215, 232, 248
HphI GGTGA 2 cut(s) 248, 319
Hpy166II GTNNAC 4 cut(s) 256, 1117, 1204, 1376
Hpy188I TCNGA 7 cut(s) 639, 655, 679, 971, 1096, 1161, 1260
Hpy188III TCNNGA 5 cut(s) 186, 239, 487, 875, 1169
Hpy8I GTNNAC 4 cut(s) 256, 1117, 1204, 1376
HpyAV CCTTC 3 cut(s) 90, 784, 836
HpyCH4III ACNGT 3 cut(s) 496, 1043, 1121
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 7 cut(s) 16, 51, 476, 767, 949, 1145, 1332
HpyF10VI GCNNNNNNNGC 6 cut(s) 19, 48, 270, 521, 632, 962
HpyF3I CTNAG 6 cut(s) 30, 184, 193, 284, 1380, 1398
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 3 cut(s) 1003, 1336, 1364
HspAI GCGC 4 cut(s) 197, 224, 288, 1364
Ksp22I TGATCA 1 cut(s) 1156
Kzo9I GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
LmnI GCTCC 2 cut(s) 59, 743
Lsp1109I GCAGC 9 cut(s) 28, 31, 63, 84, 188, 351, 362, 635, 949
LweI GCATC 4 cut(s) 600, 622, 727, 754
MaeI CTAG 5 cut(s) 354, 770, 815, 959, 1031
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 3 cut(s) 99, 464, 1073
MalI GATC 8 cut(s) 118, 170, 405, 543, 676, 1158, 1173, 1250
MboI GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
MflI RGATCY 3 cut(s) 168, 1171, 1248
MlsI TGGCCA 1 cut(s) 1106
MluCI AATT 5 cut(s) 417, 435, 663, 1262, 1314
MluNI TGGCCA 1 cut(s) 1106
MlyI GAGTC 4 cut(s) 185, 218, 813, 1171
MmeI TCCRAC 1 cut(s) 871
Mox20I TGGCCA 1 cut(s) 1106
MroXI GAANNNNTTC 1 cut(s) 794
MscI TGGCCA 1 cut(s) 1106
MseI TTAA 1 cut(s) 1020
Msp20I TGGCCA 1 cut(s) 1106
MspA1I CMGCKG 1 cut(s) 1087
MspI CCGG 3 cut(s) 215, 232, 248
MspR9I CCNGG 3 cut(s) 249, 993, 1346
Mva1269I GAATGC 2 cut(s) 478, 728
MvaI CCWGG 2 cut(s) 993, 1346
MwoI GCNNNNNNNGC 6 cut(s) 19, 48, 270, 521, 632, 962
NciI CCSGG 1 cut(s) 249
NdeII GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
NlaIII CATG 3 cut(s) 1003, 1336, 1364
NlaIV GGNNCC 1 cut(s) 170
NmuCI GTSAC 1 cut(s) 99
NspI RCATGY 3 cut(s) 1003, 1336, 1364
PaeI GCATGC 2 cut(s) 1003, 1336
PctI GAATGC 2 cut(s) 478, 728
PdmI GAANNNNTTC 1 cut(s) 794
PfeI GAWTC 5 cut(s) 235, 529, 680, 1235, 1269
PleI GAGTC 4 cut(s) 185, 217, 812, 1170
PpsI GAGTC 4 cut(s) 185, 217, 812, 1170
PpuMI RGGWCCY 1 cut(s) 1027
PsiI TTATAA 1 cut(s) 1190
Psp5II RGGWCCY 1 cut(s) 1027
Psp6I CCWGG 2 cut(s) 991, 1344
PspFI CCCAGC 1 cut(s) 524
PspGI CCWGG 2 cut(s) 991, 1344
PspN4I GGNNCC 1 cut(s) 170
PspPI GGNCC 2 cut(s) 263, 1027
PspPPI RGGWCCY 1 cut(s) 1027
PstI CTGCAG 2 cut(s) 18, 53
PstNI CAGNNNCTG 2 cut(s) 48, 57
PsuI RGATCY 3 cut(s) 168, 1171, 1248
PvuII CAGCTG 1 cut(s) 1087
RsaI GTAC 2 cut(s) 160, 1205
RsaNI GTAC 2 cut(s) 159, 1204
SaqAI TTAA 1 cut(s) 1020
Sau3AI GATC 8 cut(s) 116, 168, 403, 541, 674, 1156, 1171, 1248
Sau96I GGNCC 2 cut(s) 263, 1027
SchI GAGTC 4 cut(s) 185, 218, 813, 1171
ScrFI CCNGG 3 cut(s) 249, 993, 1346
SfaNI GCATC 4 cut(s) 600, 622, 727, 754
SfcI CTRYAG 2 cut(s) 14, 49
SinI GGWCC 1 cut(s) 1027
SmlI CTYRAG 2 cut(s) 881, 1167
SmoI CTYRAG 2 cut(s) 881, 1167
SphI GCATGC 2 cut(s) 1003, 1336
Sse9I AATT 5 cut(s) 417, 435, 663, 1262, 1314
SsiI CCGC 5 cut(s) 200, 203, 564, 613, 1063
SspMI CTAG 5 cut(s) 354, 770, 815, 959, 1031
StyD4I CCNGG 3 cut(s) 247, 991, 1344
StyI CCWWGG 2 cut(s) 259, 1030
TaaI ACNGT 3 cut(s) 496, 1043, 1121
TaiI ACGT 1 cut(s) 106
TaqI TCGA 2 cut(s) 300, 341
TasI AATT 5 cut(s) 417, 435, 663, 1262, 1314
TatI WGTACW 1 cut(s) 1203
TauI GCSGC 2 cut(s) 202, 205
TfiI GAWTC 5 cut(s) 235, 529, 680, 1235, 1269
Tru1I TTAA 1 cut(s) 1020
Tru9I TTAA 1 cut(s) 1020
TscAI CASTG 3 cut(s) 132, 337, 699
TseFI GTSAC 1 cut(s) 99
Tsp45I GTSAC 1 cut(s) 99
TspDTI ATGAA 7 cut(s) 98, 494, 748, 803, 1065, 1227, 1448
TspGWI ACGGA 2 cut(s) 405, 1436
TspRI CASTG 3 cut(s) 132, 337, 699
VpaK11BI GGWCC 1 cut(s) 1027
XapI RAATTY 1 cut(s) 1314
XceI RCATGY 3 cut(s) 1003, 1336, 1364
XmaJI CCTAGG 1 cut(s) 1030
XmiI GTMKAC 2 cut(s) 1116, 1375
XmnI GAANNNNTTC 1 cut(s) 794
XspI CTAG 5 cut(s) 354, 770, 815, 959, 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.