Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0002947

Physical Location & Seq

Genomic Coordinates Forward (+)

3289446 .. 3292664

Gene Structure 3219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g02790.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGTGACGGAGGACGATCCAGCCGCGCTTTTCTGCGATGGCCACTTTGCCGCGCCGGGGTTTCGGTTCCATCCCACCGACGAGGAGCTTGTCCTCTACTATCTAAAGCGGAAGATCTGTAAGAAGAGGCTCAAGATTGACGTCATCGCCGAGACCGACGTCTACAAGTGGGACCCTGAGGAACTTCCCGAACTATCTTTGTTGAAAACTGGAGACAGGCAATGGTTCTTTTTCAGTCCTAGAGATCGATCGAAATACCCTAATGGAGGAAGATCAAGCAGGGCAACCAGACACGGGTATTGGAAAGCTACAGTGATGGATCGTAATATTGTATGTTATTCACGGTCTGTTGGATTGAAGAAGACCTTAGTTTATTACAAAGGCCGTGCACCTAGTGGGGAGCGCACTGACTGGGTGATGCATGAGTATACCATGGATGAGGAAGAGCTCAAGAGATGCCAGAATGTACAGCAATATTATGCTCTCTACAAGGTTTACAAAAAAAGTGGACCTGGTCCCAAAAATGGCGAGCAATATGGGGCGCCATTTAGGGAAGAAGACTGGGTTGATGATGAATCCCCAGTAATCAAGACCTCTGCTGATTGCCAAATCTCAGTGAAGGAAGCTGTAGATGTTGTTTCTATTGATAATGTGAAAGGCAATGGTGAAGTCCATTATGCACCAGATGACATTGAGGAATTCATGAAACAGATGGCTGATGAGGCTGTGCTGCCACAAATGAATGGGTACGGTTACACAGCACCCCAGGTTGTTAGCGAAGAAGATACCCAAAGTGGTCTGGTTGATCTGTACTCCAGGGAAGTTTTCGATCCAGAACTTATCAAAGAGTTCAATCCAAATGTGCAGCAATGCAATGTGGAGGCCAACTTTGACTTCACACAGTCAGCTACCTCCCAAATGCAATCGCATGAGGCATCTGAAGTCACCACAGCTGTTCCTGACATTTATGAGCACGGCCCTCCTGCTCTGCATGAAGAGGATTTCTTGGAGATGGATGATCTCCTTGGTCCTGAATCTACTGTACCAAACACTCTGAATCCCGTGGATGACTTGCAGTTTGGAGAGCTAGATGGATTAAGTGAATTCGACTTGTATCATGATGCAGCCATGTTTCTTCATGACTTGGGGCCTATTGATGAAGGAAATGTTTCTCATCATCAGTACATGAATTCACAGGGGAATAATATTGTAGACCAATTTGAATACCACTTACAACCCAATCCAGCAGCTGAAAACCAGGTTAACCATATGCTGAATCCAGAATTAACTCAGATGAACAATCAGCTGTGGACAAACACTGAAAGAGCAGAACCGAATCAGGGATCTCTCTCGTATTCAACCTCAGGTGTGGTATATGAATCTTCAAATCTTCCTTCCCAAGCAACTCAAAATCAAAGCGGCAATGAGGCTGCAGGTGCTACAAGTCAGTTCTCTTCTGCTCTTTGGGCATTTGTGGAGTCTATACCTACCACTCCTGCATCTGCTTCAGAGAGTGCTTTGGTGAATCGTGCTTTCGAACGGATGTCTAGCTTCAGTAGGTTGAGAATTAATACGGCAAGTACAACAGCAGGTAATGGTTCTGAAACTATGAGAGCAGGCATAAAGAGGGGATTCTTCTTCCTTCCAGTTCTTGTAGCACTATGTGCCATTTTTTGGATTTTGATGGCAACTCTCAGACCACCGGGGAGATGCCTCCCCGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

575

Amino Acids

64.54

Weight (kDa)

4.71

Isoelectric Point (pI)

43.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34180 AT1G34180 AT1G34180 AT1G34180 AT1G34190
fragaria_vesca	FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_6g07970
malus_domestica	MD05G1037700.v1.1 MD10G1041500.v1.1
prunus_persica	Prupe.8G045800_v2.0.a1 Prupe.8G045800_v2.0.a1
pyrus_communis	pycom05g02790 pycom10g02860
rosa_chinensis	RchiOBHm_Chr3g0457681 RchiOBHm_Chr6g0273431
rosa_laevigata	RLG00000013619 RLG00000025196
rosa_multiflora	Rmu_co8212274.1_g000001 Rmu_sc0005891.1_g000016 Rmu_sc0007395.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421580 Rroxscaffold_7G00195380
rosa_rugosa	Rorug03G0022500 Rorug06G0074700
rosa_samantha	Rh3AG083200 Rh3BG085700 Rh3CG086000 Rh3DG086600 Rh6AG189800 Rh6BG193300 Rh6CG193000 Rh6DG184500
rosa_wichuraiana	Rw3G007120 Rw6G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1424
AatII	GACGTC	2 cut(s)	144, 162
Acc36I	ACCTGC	2 cut(s)	1424, 1580
AccB1I	GGYRCC	1 cut(s)	541
AccB7I	CCANNNNNTGG	1 cut(s)	1674
AccI	GTMKAC	3 cut(s)	162, 428, 1212
AccII	CGCG	2 cut(s)	26, 53
AciI	CCGC	5 cut(s)	24, 51, 109, 1419, 1719
AclWI	GGATC	4 cut(s)	11, 327, 824, 1351
AcoI	YGGCCR	1 cut(s)	40
AcsI	RAATTY	3 cut(s)	698, 1103, 1189
AcuI	CTGAAG	3 cut(s)	960, 1491, 1537
AcyI	GRCGYC	3 cut(s)	141, 159, 542
AdeI	CACNNNGTG	2 cut(s)	395, 1664
AfaI	GTAC	6 cut(s)	468, 749, 812, 1044, 1184, 1582
AfiI	CCNNNNNNNGG	6 cut(s)	57, 266, 294, 524, 1340, 1674
AgsI	TTSAA	6 cut(s)	205, 358, 853, 1223, 1359, 1386
AjnI	CCWGG	4 cut(s)	511, 765, 815, 1257
AjuI	GAANNNNNNNTTGG	2 cut(s)	878, 910
Alw21I	GWGCWC	3 cut(s)	391, 450, 975
Alw26I	GTCTC	2 cut(s)	146, 207
Alw44I	GTGCAC	1 cut(s)	387
AlwI	GGATC	4 cut(s)	11, 327, 824, 1351
AlwNI	CAGNNNCTG	1 cut(s)	1250
AoxI	GGCC	5 cut(s)	40, 382, 882, 976, 1148
ApaLI	GTGCAC	1 cut(s)	387
ApeKI	GCWGC	5 cut(s)	730, 865, 1124, 1247, 1430
ApoI	RAATTY	3 cut(s)	698, 1103, 1189
ArsI	GACNNNNNNTTYG	2 cut(s)	1061, 1093
AseI	ATTAAT	1 cut(s)	1569
Asp700I	GAANNNNTTC	1 cut(s)	1168
AspLEI	GCGC	4 cut(s)	28, 55, 405, 544
AspS9I	GGNCC	6 cut(s)	172, 509, 515, 977, 1028, 1148
AsuC2I	CCSGG	2 cut(s)	57, 1704
AsuHPI	GGTGA	5 cut(s)	16, 427, 677, 937, 1534
AsuII	TTCGAA	1 cut(s)	1536
AvaII	GGWCC	4 cut(s)	172, 509, 515, 1028
AxyI	CCTNAGG	2 cut(s)	177, 1363
BaeGI	GKGCMC	1 cut(s)	391
BalI	TGGCCA	1 cut(s)	42
BanI	GGYRCC	1 cut(s)	541
BanII	GRGCYC	1 cut(s)	450
BbsI	GAAGAC	2 cut(s)	368, 564
Bbv12I	GWGCWC	3 cut(s)	391, 450, 975
BbvI	GCAGC	5 cut(s)	717, 877, 1136, 1259, 1417
BccI	CCATC	7 cut(s)	32, 78, 310, 706, 1006, 1085, 1678
BceAI	ACGGC	3 cut(s)	369, 991, 1590
BciT130I	CCWGG	4 cut(s)	513, 767, 817, 1259
BcnI	CCSGG	2 cut(s)	57, 1704
BcoDI	GTCTC	2 cut(s)	146, 207
BfaI	CTAG	4 cut(s)	240, 393, 1088, 1548
BfmI	CTRYAG	3 cut(s)	309, 627, 1431
BfoI	RGCGCY	1 cut(s)	545
BfuAI	ACCTGC	2 cut(s)	1424, 1580
BglII	AGATCT	1 cut(s)	114
BisI	GCNGC	8 cut(s)	24, 51, 731, 866, 1125, 1248, 1420, 1431
BlsI	GCNGC	8 cut(s)	25, 52, 732, 867, 1126, 1249, 1421, 1432
Bme1390I	CCNGG	6 cut(s)	57, 513, 767, 817, 1259, 1704
Bme18I	GGWCC	4 cut(s)	172, 509, 515, 1028
BmgT120I	GGNCC	6 cut(s)	172, 509, 515, 977, 1028, 1148
BmiI	GGNNCC	6 cut(s)	68, 173, 174, 517, 543, 1149
BmrFI	CCNGG	6 cut(s)	57, 513, 767, 817, 1259, 1704
BmrI	ACTGGG	3 cut(s)	421, 571, 575
BmsI	GCATC	6 cut(s)	408, 446, 944, 1111, 1508, 1700
BmuI	ACTGGG	3 cut(s)	421, 571, 575
BoxI	GACNNNNGTC	1 cut(s)	158
BpiI	GAAGAC	2 cut(s)	368, 564
BpmI	CTGGAG	2 cut(s)	231, 799
Bpu14I	TTCGAA	1 cut(s)	1536
BpuEI	CTTGAG	2 cut(s)	116, 434
BpuMI	CCSGG	2 cut(s)	57, 1704
Bsa29I	ATCGAT	1 cut(s)	247
BsaHI	GRCGYC	3 cut(s)	141, 159, 542
BsaI	GGTCTC	1 cut(s)	146
BsaJI	CCNNGG	7 cut(s)	56, 432, 765, 816, 1024, 1062, 1703
Bsc4I	CCNNNNNNNGG	6 cut(s)	57, 266, 294, 524, 1340, 1674
Bse1I	ACTGG	5 cut(s)	214, 416, 566, 581, 1646
Bse21I	CCTNAGG	2 cut(s)	177, 1363
Bse3DI	GCAATG	5 cut(s)	227, 667, 875, 880, 1429
BseBI	CCWGG	4 cut(s)	513, 767, 817, 1259
BseCI	ATCGAT	1 cut(s)	247
BseDI	CCNNGG	7 cut(s)	56, 432, 765, 816, 1024, 1062, 1703
BseGI	GGATG	5 cut(s)	70, 442, 1021, 1072, 1548
BseLI	CCNNNNNNNGG	6 cut(s)	57, 266, 294, 524, 1340, 1674
BseMI	GCAATG	5 cut(s)	227, 667, 875, 880, 1429
BseMII	CTCAG	5 cut(s)	168, 627, 1304, 1377, 1708
BseNI	ACTGG	5 cut(s)	214, 416, 566, 581, 1646
BseRI	GAGGAG	1 cut(s)	98
BseSI	GKGCMC	1 cut(s)	391
BseXI	GCAGC	5 cut(s)	717, 877, 1136, 1259, 1417
BsgI	GTGCAG	1 cut(s)	884
Bsh1236I	CGCG	2 cut(s)	26, 53
Bsh1285I	CGRYCG	1 cut(s)	251
BshFI	GGCC	5 cut(s)	42, 384, 884, 978, 1150
BshNI	GGYRCC	1 cut(s)	541
BshVI	ATCGAT	1 cut(s)	247
BsiEI	CGRYCG	1 cut(s)	251
BsiHKAI	GWGCWC	3 cut(s)	391, 450, 975
BsiSI	CCGG	2 cut(s)	56, 1703
BslFI	GGGAC	2 cut(s)	185, 501
BslI	CCNNNNNNNGG	6 cut(s)	57, 266, 294, 524, 1340, 1674
BsmAI	GTCTC	2 cut(s)	146, 207
BsmFI	GGGAC	2 cut(s)	185, 501
BsnI	GGCC	5 cut(s)	42, 384, 884, 978, 1150
Bso31I	GGTCTC	1 cut(s)	146
Bsp119I	TTCGAA	1 cut(s)	1536
Bsp1286I	GDGCHC	3 cut(s)	391, 450, 975
Bsp1407I	TGTACA	1 cut(s)	466
Bsp19I	CCATGG	1 cut(s)	432
BspACI	CCGC	5 cut(s)	24, 51, 109, 1419, 1719
BspANI	GGCC	5 cut(s)	42, 384, 884, 978, 1150
BspCNI	CTCAG	5 cut(s)	169, 626, 1303, 1376, 1707
BspDI	ATCGAT	1 cut(s)	247
BspFNI	CGCG	2 cut(s)	26, 53
BspHI	TCATGA	3 cut(s)	702, 1117, 1138
BspLI	GGNNCC	6 cut(s)	68, 173, 174, 517, 543, 1149
BspMAI	CTGCAG	1 cut(s)	1435
BspMI	ACCTGC	2 cut(s)	1424, 1580
BspPI	GGATC	4 cut(s)	11, 327, 824, 1351
BspQI	GCTCTTC	1 cut(s)	438
BspT104I	TTCGAA	1 cut(s)	1536
BspT107I	GGYRCC	1 cut(s)	541
BspTNI	GGTCTC	1 cut(s)	146
BsrDI	GCAATG	5 cut(s)	227, 667, 875, 880, 1429
BsrGI	TGTACA	1 cut(s)	466
BsrI	ACTGG	5 cut(s)	214, 416, 566, 581, 1646
BssECI	CCNNGG	7 cut(s)	56, 432, 765, 816, 1024, 1062, 1703
BssNAI	GTATAC	1 cut(s)	429
BssNI	GRCGYC	3 cut(s)	141, 159, 542
BssT1I	CCWWGG	2 cut(s)	432, 1024
Bst1107I	GTATAC	1 cut(s)	429
Bst2UI	CCWGG	4 cut(s)	513, 767, 817, 1259
Bst4CI	ACNGT	5 cut(s)	313, 345, 752, 903, 1042
Bst6I	CTCTTC	4 cut(s)	119, 438, 990, 1459
BstACI	GRCGYC	3 cut(s)	141, 159, 542
BstAPI	GCANNNNNTGC	1 cut(s)	1664
BstAUI	TGTACA	1 cut(s)	466
BstBI	TTCGAA	1 cut(s)	1536
BstC8I	GCNNGC	2 cut(s)	530, 1618
BstDEI	CTNAG	6 cut(s)	177, 367, 613, 1290, 1363, 1694
BstDSI	CCRYGG	2 cut(s)	432, 1062
BstENI	CCTNNNNNAGG	1 cut(s)	264
BstF5I	GGATG	5 cut(s)	70, 442, 1021, 1072, 1548
BstFNI	CGCG	2 cut(s)	26, 53
BstH2I	RGCGCY	1 cut(s)	545
BstHHI	GCGC	4 cut(s)	28, 55, 405, 544
BstMAI	GTCTC	2 cut(s)	146, 207
BstMCI	CGRYCG	1 cut(s)	251
BstMWI	GCNNNNNNNGC	4 cut(s)	722, 1436, 1466, 1664
BstNI	CCWGG	4 cut(s)	513, 767, 817, 1259
BstPAI	GACNNNNGTC	1 cut(s)	158
BstSCI	CCNGG	6 cut(s)	55, 511, 765, 815, 1257, 1702
BstSFI	CTRYAG	3 cut(s)	309, 627, 1431
BstSLI	GKGCMC	1 cut(s)	391
BstUI	CGCG	2 cut(s)	26, 53
BstV1I	GCAGC	5 cut(s)	717, 877, 1136, 1259, 1417
BstV2I	GAAGAC	2 cut(s)	368, 564
BstX2I	RGATCY	2 cut(s)	114, 1343
BstYI	RGATCY	2 cut(s)	114, 1343
BstZ17I	GTATAC	1 cut(s)	429
Bsu15I	ATCGAT	1 cut(s)	247
Bsu36I	CCTNAGG	2 cut(s)	177, 1363
BsuRI	GGCC	5 cut(s)	42, 384, 884, 978, 1150
BsuTUI	ATCGAT	1 cut(s)	247
BtgI	CCRYGG	2 cut(s)	432, 1062
BtgZI	GCGATG	2 cut(s)	51, 130
BtsCI	GGATG	5 cut(s)	70, 442, 1021, 1072, 1548
BtsIMutI	CAGTG	4 cut(s)	318, 405, 621, 1317
BveI	ACCTGC	2 cut(s)	1424, 1580
Cac8I	GCNNGC	2 cut(s)	530, 1618
CaiI	CAGNNNCTG	1 cut(s)	1250
CciI	TCATGA	3 cut(s)	702, 1117, 1138
CfoI	GCGC	4 cut(s)	28, 55, 405, 544
Cfr13I	GGNCC	6 cut(s)	172, 509, 515, 977, 1028, 1148
ClaI	ATCGAT	1 cut(s)	247
CsiI	ACCWGGT	2 cut(s)	511, 1257
Csp6I	GTAC	6 cut(s)	467, 748, 811, 1043, 1183, 1581
CspCI	CAANNNNNGTGG	2 cut(s)	487, 522
CviAII	CATG	9 cut(s)	422, 433, 703, 929, 992, 1118, 1129, 1139, 1186
CviQI	GTAC	6 cut(s)	467, 748, 811, 1043, 1183, 1581
DdeI	CTNAG	6 cut(s)	177, 367, 613, 1290, 1363, 1694
DinI	GGCGCC	1 cut(s)	543
DraIII	CACNNNGTG	2 cut(s)	395, 1664
EaeI	YGGCCR	1 cut(s)	40
Eam1104I	CTCTTC	4 cut(s)	119, 438, 990, 1459
EarI	CTCTTC	4 cut(s)	119, 438, 990, 1459
Ecl136II	GAGCTC	1 cut(s)	448
Eco130I	CCWWGG	2 cut(s)	432, 1024
Eco24I	GRGCYC	1 cut(s)	450
Eco31I	GGTCTC	1 cut(s)	146
Eco47I	GGWCC	4 cut(s)	172, 509, 515, 1028
Eco53kI	GAGCTC	1 cut(s)	448
Eco57I	CTGAAG	3 cut(s)	960, 1491, 1537
Eco81I	CCTNAGG	2 cut(s)	177, 1363
EcoICRI	GAGCTC	1 cut(s)	448
EcoNI	CCTNNNNNAGG	1 cut(s)	264
EcoO109I	RGGNCCY	2 cut(s)	172, 1148
EcoRI	GAATTC	3 cut(s)	698, 1103, 1189
EcoRII	CCWGG	4 cut(s)	511, 765, 815, 1257
EcoT14I	CCWWGG	2 cut(s)	432, 1024
EcoT22I	ATGCAT	1 cut(s)	423
EcoT38I	GRGCYC	1 cut(s)	450
EgeI	GGCGCC	1 cut(s)	543
EheI	GGCGCC	1 cut(s)	543
ErhI	CCWWGG	2 cut(s)	432, 1024
FaeI	CATG	9 cut(s)	425, 436, 706, 932, 995, 1121, 1132, 1142, 1189
FalI	AAGNNNNNCTT	2 cut(s)	350, 382
FaqI	GGGAC	2 cut(s)	185, 501
FatI	CATG	9 cut(s)	421, 432, 702, 928, 991, 1117, 1128, 1138, 1185
FauNDI	CATATG	1 cut(s)	1269
FblI	GTMKAC	3 cut(s)	162, 428, 1212
Fnu4HI	GCNGC	8 cut(s)	24, 51, 731, 866, 1125, 1248, 1420, 1431
FokI	GGATG	5 cut(s)	57, 449, 1028, 1079, 1555
FriOI	GRGCYC	1 cut(s)	450
Fsp4HI	GCNGC	8 cut(s)	24, 51, 731, 866, 1125, 1248, 1420, 1431
FspBI	CTAG	4 cut(s)	240, 393, 1088, 1548
GlaI	GCGC	4 cut(s)	27, 54, 404, 543
GluI	GCNGC	8 cut(s)	24, 51, 731, 866, 1125, 1248, 1420, 1431
GsuI	CTGGAG	2 cut(s)	231, 799
HaeII	RGCGCY	1 cut(s)	545
HaeIII	GGCC	5 cut(s)	42, 384, 884, 978, 1150
HapII	CCGG	2 cut(s)	56, 1703
HhaI	GCGC	4 cut(s)	28, 55, 405, 544
Hin1I	GRCGYC	3 cut(s)	141, 159, 542
Hin1II	CATG	9 cut(s)	425, 436, 706, 932, 995, 1121, 1132, 1142, 1189
Hin6I	GCGC	4 cut(s)	26, 53, 403, 542
HinP1I	GCGC	4 cut(s)	26, 53, 403, 542
HincII	GTYRAC	1 cut(s)	1264
HindII	GTYRAC	1 cut(s)	1264
HinfI	GANTC	9 cut(s)	575, 1034, 1057, 1276, 1336, 1379, 1478, 1525, 1632
HpaI	GTTAAC	1 cut(s)	1264
HpaII	CCGG	2 cut(s)	56, 1703
HphI	GGTGA	5 cut(s)	16, 427, 677, 937, 1534
Hpy166II	GTNNAC	8 cut(s)	163, 389, 429, 496, 509, 1213, 1264, 1311
Hpy188I	TCNGA	6 cut(s)	940, 1056, 1293, 1510, 1603, 1697
Hpy8I	GTNNAC	8 cut(s)	163, 389, 429, 496, 509, 1213, 1264, 1311
Hpy99I	CGWCG	2 cut(s)	83, 161
HpyAV	CCTTC	4 cut(s)	613, 1154, 1404, 1652
HpyCH4III	ACNGT	5 cut(s)	313, 345, 752, 903, 1042
HpyCH4IV	ACGT	2 cut(s)	141, 159
HpyF10VI	GCNNNNNNNGC	4 cut(s)	722, 1436, 1466, 1664
HpyF3I	CTNAG	6 cut(s)	177, 367, 613, 1290, 1363, 1694
HpySE526I	ACGT	2 cut(s)	141, 159
Hsp92I	GRCGYC	3 cut(s)	141, 159, 542
Hsp92II	CATG	9 cut(s)	425, 436, 706, 932, 995, 1121, 1132, 1142, 1189
HspAI	GCGC	4 cut(s)	26, 53, 403, 542
KasI	GGCGCC	1 cut(s)	541
KflI	GGGWCCC	1 cut(s)	172
KspAI	GTTAAC	1 cut(s)	1264
LguI	GCTCTTC	1 cut(s)	438
LmnI	GCTCC	2 cut(s)	85, 400
Lsp1109I	GCAGC	5 cut(s)	717, 877, 1136, 1259, 1417
LweI	GCATC	6 cut(s)	408, 446, 944, 1111, 1508, 1700
MabI	ACCWGGT	2 cut(s)	511, 1257
MaeI	CTAG	4 cut(s)	240, 393, 1088, 1548
MaeII	ACGT	2 cut(s)	141, 159
MaeIII	GTNAC	3 cut(s)	4, 752, 943
MflI	RGATCY	2 cut(s)	114, 1343
MhlI	GDGCHC	3 cut(s)	391, 450, 975
MlsI	TGGCCA	1 cut(s)	42
MluCI	AATT	6 cut(s)	698, 1103, 1189, 1217, 1283, 1566
MluNI	TGGCCA	1 cut(s)	42
Mly113I	GGCGCC	1 cut(s)	542
MlyI	GAGTC	1 cut(s)	1487
MmeI	TCCRAC	1 cut(s)	331
Mox20I	TGGCCA	1 cut(s)	42
Mph1103I	ATGCAT	1 cut(s)	423
MroXI	GAANNNNTTC	1 cut(s)	1168
MscI	TGGCCA	1 cut(s)	42
MseI	TTAA	4 cut(s)	1097, 1263, 1286, 1569
Msp20I	TGGCCA	1 cut(s)	42
MspA1I	CMGCKG	3 cut(s)	953, 1250, 1306
MspI	CCGG	2 cut(s)	56, 1703
MspR9I	CCNGG	6 cut(s)	57, 513, 767, 817, 1259, 1704
MvaI	CCWGG	4 cut(s)	513, 767, 817, 1259
MvnI	CGCG	2 cut(s)	26, 53
MwoI	GCNNNNNNNGC	4 cut(s)	722, 1436, 1466, 1664
NarI	GGCGCC	1 cut(s)	542
NciI	CCSGG	2 cut(s)	57, 1704
NcoI	CCATGG	1 cut(s)	432
NdeI	CATATG	1 cut(s)	1269
NlaIII	CATG	9 cut(s)	425, 436, 706, 932, 995, 1121, 1132, 1142, 1189
NlaIV	GGNNCC	6 cut(s)	68, 173, 174, 517, 543, 1149
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	2 cut(s)	4, 943
NsiI	ATGCAT	1 cut(s)	423
NspV	TTCGAA	1 cut(s)	1536
PagI	TCATGA	3 cut(s)	702, 1117, 1138
PaqCI	CACCTGC	1 cut(s)	1424
PciSI	GCTCTTC	1 cut(s)	438
PcsI	WCGNNNNNNNCGW	2 cut(s)	147, 153
PdmI	GAANNNNTTC	1 cut(s)	1168
PfeI	GAWTC	8 cut(s)	575, 1034, 1057, 1276, 1336, 1379, 1525, 1632
PflFI	GACNNNGTC	1 cut(s)	513
PflMI	CCANNNNNTGG	1 cut(s)	1674
PkrI	GCNGC	8 cut(s)	25, 52, 732, 867, 1126, 1249, 1421, 1432
Ple19I	CGATCG	1 cut(s)	251
PleI	GAGTC	1 cut(s)	1486
PluTI	GGCGCC	1 cut(s)	545
PpsI	GAGTC	1 cut(s)	1486
PpuMI	RGGWCCY	1 cut(s)	172
PshAI	GACNNNNGTC	1 cut(s)	158
PshBI	ATTAAT	1 cut(s)	1569
Psp124BI	GAGCTC	1 cut(s)	450
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	4 cut(s)	511, 765, 815, 1257
PspGI	CCWGG	4 cut(s)	511, 765, 815, 1257
PspN4I	GGNNCC	6 cut(s)	68, 173, 174, 517, 543, 1149
PspPI	GGNCC	6 cut(s)	172, 509, 515, 977, 1028, 1148
PspPPI	RGGWCCY	1 cut(s)	172
PstI	CTGCAG	1 cut(s)	1435
PstNI	CAGNNNCTG	1 cut(s)	1250
PsuI	RGATCY	2 cut(s)	114, 1343
PsyI	GACNNNGTC	1 cut(s)	513
PvuI	CGATCG	1 cut(s)	251
PvuII	CAGCTG	3 cut(s)	953, 1250, 1306
RsaI	GTAC	6 cut(s)	468, 749, 812, 1044, 1184, 1582
RsaNI	GTAC	6 cut(s)	467, 748, 811, 1043, 1183, 1581
SacI	GAGCTC	1 cut(s)	450
SapI	GCTCTTC	1 cut(s)	438
SaqAI	TTAA	4 cut(s)	1097, 1263, 1286, 1569
SatI	GCNGC	8 cut(s)	24, 51, 731, 866, 1125, 1248, 1420, 1431
Sau96I	GGNCC	6 cut(s)	172, 509, 515, 977, 1028, 1148
SchI	GAGTC	1 cut(s)	1487
ScrFI	CCNGG	6 cut(s)	57, 513, 767, 817, 1259, 1704
SduI	GDGCHC	3 cut(s)	391, 450, 975
SexAI	ACCWGGT	2 cut(s)	511, 1257
SfaNI	GCATC	6 cut(s)	408, 446, 944, 1111, 1508, 1700
SfcI	CTRYAG	3 cut(s)	309, 627, 1431
SfoI	GGCGCC	1 cut(s)	543
SfuI	TTCGAA	1 cut(s)	1536
SinI	GGWCC	4 cut(s)	172, 509, 515, 1028
SmlI	CTYRAG	2 cut(s)	131, 449
SmoI	CTYRAG	2 cut(s)	131, 449
Sse9I	AATT	6 cut(s)	698, 1103, 1189, 1217, 1283, 1566
SsiI	CCGC	5 cut(s)	24, 51, 109, 1419, 1719
SspDI	GGCGCC	1 cut(s)	541
SspI	AATATT	3 cut(s)	328, 476, 1207
SspMI	CTAG	4 cut(s)	240, 393, 1088, 1548
SstI	GAGCTC	1 cut(s)	450
StyD4I	CCNGG	6 cut(s)	55, 511, 765, 815, 1257, 1702
StyI	CCWWGG	2 cut(s)	432, 1024
TaaI	ACNGT	5 cut(s)	313, 345, 752, 903, 1042
TaiI	ACGT	2 cut(s)	144, 162
TaqI	TCGA	5 cut(s)	247, 251, 828, 1107, 1536
TaqII	GACCGA	1 cut(s)	170
TasI	AATT	6 cut(s)	698, 1103, 1189, 1217, 1283, 1566
TatI	WGTACW	4 cut(s)	466, 810, 1182, 1580
TauI	GCSGC	3 cut(s)	26, 53, 1422
TfiI	GAWTC	8 cut(s)	575, 1034, 1057, 1276, 1336, 1379, 1525, 1632
Tru1I	TTAA	4 cut(s)	1097, 1263, 1286, 1569
Tru9I	TTAA	4 cut(s)	1097, 1263, 1286, 1569
TscAI	CASTG	4 cut(s)	318, 412, 621, 1324
TseFI	GTSAC	2 cut(s)	4, 943
TseI	GCWGC	5 cut(s)	730, 865, 1124, 1247, 1430
Tsp45I	GTSAC	2 cut(s)	4, 943
TspGWI	ACGGA	2 cut(s)	23, 1555
TspRI	CASTG	4 cut(s)	318, 412, 621, 1324
Tth111I	GACNNNGTC	1 cut(s)	513
Van91I	CCANNNNNTGG	1 cut(s)	1674
VneI	GTGCAC	1 cut(s)	387
VpaK11BI	GGWCC	4 cut(s)	172, 509, 515, 1028
VspI	ATTAAT	1 cut(s)	1569
XagI	CCTNNNNNAGG	1 cut(s)	264
XapI	RAATTY	3 cut(s)	698, 1103, 1189
XmiI	GTMKAC	3 cut(s)	162, 428, 1212
XmnI	GAANNNNTTC	1 cut(s)	1168
XspI	CTAG	4 cut(s)	240, 393, 1088, 1548
ZraI	GACGTC	2 cut(s)	142, 160
Zsp2I	ATGCAT	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.