Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0002947

Physical Location & Seq

Genomic Coordinates Reverse (-)

32665761 .. 32669514

Gene Structure 3754 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G016520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGTCTCAGGAGACGACTTGGCGTCCGCCTTCTGCGACGGCCAGTTCTGGCAGCCGGGGTTTCGGTTCCATCCCACCGACGAGGAACTCGTCCTCTACTATCTCAAGCGGAAGATCTGCAAGAAGAGGCTCAAGCTTAACGTCATCGCCGAGACCGACGTCTATAAGTGGGACCCTGAGGAACTTCCTGGTTTGTCTCTATTGAAAACTGGAGACAGGCAATGGTTCTTTTTCAGTCCGAGAGATCGGAGGTACCCTAATGGGGGGAGATCAAACAGGGCAACCAGACATGGGTATTGGAAAGCTACTGGAAAGGATCGCAACATTTCCTGTTATAACCGATCAGTTGGACTGAAGAAGACCTTAGTTTTCTATAAAGGCCGTGCACCTACTGGGGAGCGCACTGATTGGGTGATGCATGAGTATACCTTGGATGAGGAGGAGTTAAAGAGATGCCAGAATGTACAGGAATATTATGCTCTTTACAAAGTTTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAGCAATATGGGGCGCCATTTAGAGAAGAAGATTGGGCTGATGATGAATGCCCGATAATAAATAGCTCTGCTGATAGGGAAATCTCAGTTGAGCAAGTTGGAGAGCTGGCTGCTAATTATAATGTGAAACCTTTTGGAGAAATTCCATTGAAGCAAGTTGAAGAGATTACTGCTAATGGTTATGTGAATGTTAACAGCGAAGTCCATTCTACAATAGATGACTTGGAACGGTTCATGAAACAGATTGCTGATGACGCTGTGCTTGACGACCCGCAACAGTTTAATGATCATGTTCACACCCTATCTCAGGTTGTTAGCGAAGAAGAAACACAAAGTACTGTGGTGGATCTGTACTCCAGTGAAGTTAAATGCCCACAATCAATTACAACTTTTGATCCAAGTGGTCAGCAGGGCAATGCACATGCATGCTTTGACTTCTCACAGTCAGCTACTTCACAGATGCAACTGTACGAGGCATCTGAAGCATCTGCTTCTGACTTTCATCAGCCGGAGCCTTTCACTCCCATACTACGTGAAGAGGACTTCCTGGAGATGGATGATCTCCTGGGTCCTGAACCTACTGTTTCAAACACTGGGAATTCCGGGGGTAACTTCCAGTTTGATGAGTTGGATGGATTTGATATGTTCCATGATGCGGCCTTGTTTTTCAATGACATGGGGCCCATTGAACAAGGCACTGTTTCTCATCAATTCATGAATTCAATGGGGGGTAATATTGTAAACCAGTTTGATTACCAGATACAACCAGCACCTCCAATTCAGATCAACCATCAGCTGAATCAAGAGTCAACTCAGATTAACAATCAGCTATGGGCACAGAATGAAAGGCAAGATCTCTATACTTCAGCAGAATCAAAGCAGGGGTCTGGACCTCAATTCAACTCAGGTGTGGTATACGATTCGTCAAATCATCCTCCACAAGCAAATCAAAATCAAAGTGGCAATGAAGCTGCCAGTGTTACTAGTCAGTTTTCTTCTGCCCTATGGTCTTTTGTGGAGTCTATACCTACTACTCCTGCATCTGCATCAGAGAATGCCTTGGTGAGTCGGGCCTTTGAACGGATGAATAGCTTTAGCAGGATGAGAATAATTGCGAGGAGCGCAAATGTCCCTGCAGGTAATGATTCTGAAACTAGGGGATCCCGAAAGAGGGGATTCTTCTTCATTCCAGTTCTTGTGGCACTATGTGCTATTTTTTGGGTCTTGATGGCATCTCTCAGGCAATGGGGGAGATGCATCTCCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

597

Amino Acids

67.36

Weight (kDa)

4.85

Isoelectric Point (pI)

45.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	19 - 144	2.9e-46	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34180 AT1G34180 AT1G34180 AT1G34180 AT1G34190
fragaria_vesca	FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_6g07970
malus_domestica	MD05G1037700.v1.1 MD10G1041500.v1.1
prunus_persica	Prupe.8G045800_v2.0.a1 Prupe.8G045800_v2.0.a1
pyrus_communis	pycom05g02790 pycom10g02860
rosa_chinensis	RchiOBHm_Chr3g0457681 RchiOBHm_Chr6g0273431
rosa_laevigata	RLG00000013619 RLG00000025196
rosa_multiflora	Rmu_co8212274.1_g000001 Rmu_sc0005891.1_g000016 Rmu_sc0007395.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421580 Rroxscaffold_7G00195380
rosa_rugosa	Rorug03G0022500 Rorug06G0074700
rosa_samantha	Rh3AG083200 Rh3BG085700 Rh3CG086000 Rh3DG086600 Rh6AG189800 Rh6BG193300 Rh6CG193000 Rh6DG184500
rosa_wichuraiana	Rw3G007120 Rw6G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	336, 645
AatII	GACGTC	1 cut(s)	162
Acc36I	ACCTGC	1 cut(s)	1652
Acc65I	GGTACC	1 cut(s)	252
AccB1I	GGYRCC	2 cut(s)	252, 538
AccI	GTMKAC	2 cut(s)	425, 1440
AciI	CCGC	4 cut(s)	27, 109, 797, 1181
AclWI	GGATC	5 cut(s)	324, 879, 914, 1680, 1693
AcoI	YGGCCR	1 cut(s)	40
AcsI	RAATTY	3 cut(s)	666, 1123, 1243
AcuI	CTGAAG	3 cut(s)	374, 1026, 1374
AcyI	GRCGYC	3 cut(s)	23, 159, 539
AdeI	CACNNNGTG	1 cut(s)	1733
AfaI	GTAC	5 cut(s)	254, 465, 862, 878, 995
AhdI	GACNNNNNGTC	1 cut(s)	22
AhlI	ACTAGT	1 cut(s)	1508
AjnI	CCWGG	4 cut(s)	187, 508, 1071, 1089
AluBI	AGCT	9 cut(s)	136, 305, 591, 631, 974, 1321, 1354, 1496, 1617
AluI	AGCT	9 cut(s)	136, 305, 591, 631, 974, 1321, 1354, 1496, 1617
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	5 cut(s)	6, 10, 146, 201, 207
Alw44I	GTGCAC	1 cut(s)	384
AlwI	GGATC	5 cut(s)	324, 879, 914, 1680, 1693
AoxI	GGCC	5 cut(s)	40, 379, 1182, 1205, 1596
ApaI	GGGCCC	1 cut(s)	1209
ApaLI	GTGCAC	1 cut(s)	384
ApeKI	GCWGC	3 cut(s)	52, 635, 1496
ApoI	RAATTY	3 cut(s)	666, 1123, 1243
ArsI	GACNNNNNNTTYG	2 cut(s)	1394, 1426
Asp718I	GGTACC	1 cut(s)	252
AspLEI	GCGC	3 cut(s)	402, 541, 1649
AspS9I	GGNCC	8 cut(s)	172, 506, 512, 1094, 1205, 1206, 1415, 1596
AsuC2I	CCSGG	2 cut(s)	57, 1129
AsuHPI	GGTGA	3 cut(s)	424, 536, 1600
AvaII	GGWCC	5 cut(s)	172, 506, 512, 1094, 1415
AxyI	CCTNAGG	1 cut(s)	177
BaeGI	GKGCMC	3 cut(s)	388, 1209, 1363
BamHI	GGATCC	1 cut(s)	1685
BanI	GGYRCC	2 cut(s)	252, 538
BanII	GRGCYC	1 cut(s)	1209
BbsI	GAAGAC	1 cut(s)	365
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	3 cut(s)	64, 622, 1483
BccI	CCATC	5 cut(s)	78, 1072, 1151, 1323, 1747
BceAI	ACGGC	2 cut(s)	55, 366
BciT130I	CCWGG	4 cut(s)	189, 510, 1073, 1091
BclI	TGATCA	1 cut(s)	811
BcnI	CCSGG	2 cut(s)	57, 1129
BcoDI	GTCTC	5 cut(s)	6, 10, 146, 201, 207
BcuI	ACTAGT	1 cut(s)	1508
BfaI	CTAG	2 cut(s)	1509, 1680
BfmI	CTRYAG	1 cut(s)	1659
BfoI	RGCGCY	1 cut(s)	542
BfuAI	ACCTGC	1 cut(s)	1652
BglII	AGATCT	2 cut(s)	114, 1378
BisI	GCNGC	4 cut(s)	53, 636, 1182, 1497
BlsI	GCNGC	4 cut(s)	54, 637, 1183, 1498
BmcAI	AGTACT	1 cut(s)	862
Bme1390I	CCNGG	6 cut(s)	57, 189, 510, 1073, 1091, 1129
Bme18I	GGWCC	5 cut(s)	172, 506, 512, 1094, 1415
BmeRI	GACNNNNNGTC	1 cut(s)	22
BmgT120I	GGNCC	8 cut(s)	172, 506, 512, 1094, 1205, 1206, 1415, 1596
BmrFI	CCNGG	6 cut(s)	57, 189, 510, 1073, 1091, 1129
BmrI	ACTGGG	2 cut(s)	402, 1128
BmuI	ACTGGG	2 cut(s)	402, 1128
BoxI	GACNNNNGTC	1 cut(s)	158
BpiI	GAAGAC	1 cut(s)	365
BpmI	CTGGAG	3 cut(s)	231, 865, 1094
BpuEI	CTTGAG	2 cut(s)	89, 116
BpuMI	CCSGG	2 cut(s)	57, 1129
BsaAI	YACGTR	1 cut(s)	1058
BsaHI	GRCGYC	3 cut(s)	23, 159, 539
BsaI	GGTCTC	2 cut(s)	10, 146
BsaJI	CCNNGG	5 cut(s)	56, 429, 1090, 1128, 1584
Bse21I	CCTNAGG	1 cut(s)	177
Bse3DI	GCAATG	4 cut(s)	227, 946, 1495, 1775
BseBI	CCWGG	4 cut(s)	189, 510, 1073, 1091
BseDI	CCNNGG	5 cut(s)	56, 429, 1090, 1128, 1584
BseGI	GGATG	7 cut(s)	70, 439, 1087, 1162, 1456, 1614, 1632
BseMI	GCAATG	4 cut(s)	227, 946, 1495, 1775
BseMII	CTCAG	7 cut(s)	21, 168, 624, 845, 1352, 1443, 1777
BseRI	GAGGAG	4 cut(s)	452, 455, 1657, 1777
BseSI	GKGCMC	3 cut(s)	388, 1209, 1363
BseXI	GCAGC	3 cut(s)	64, 622, 1483
BshFI	GGCC	5 cut(s)	42, 381, 1184, 1207, 1598
BshNI	GGYRCC	2 cut(s)	252, 538
BsiHKAI	GWGCWC	1 cut(s)	388
BsiSI	CCGG	3 cut(s)	56, 1034, 1128
BslFI	GGGAC	2 cut(s)	185, 1640
BsmAI	GTCTC	5 cut(s)	6, 10, 146, 201, 207
BsmBI	CGTCTC	1 cut(s)	6
BsmFI	GGGAC	2 cut(s)	185, 1640
BsmI	GAATGC	2 cut(s)	578, 1585
BsnI	GGCC	5 cut(s)	42, 381, 1184, 1207, 1598
Bso31I	GGTCTC	2 cut(s)	10, 146
Bsp120I	GGGCCC	1 cut(s)	1205
Bsp1286I	GDGCHC	3 cut(s)	388, 1209, 1363
Bsp1407I	TGTACA	1 cut(s)	463
BspACI	CCGC	4 cut(s)	27, 109, 797, 1181
BspANI	GGCC	5 cut(s)	42, 381, 1184, 1207, 1598
BspCNI	CTCAG	7 cut(s)	20, 169, 623, 844, 1351, 1442, 1776
BspHI	TCATGA	3 cut(s)	759, 1239, 1790
BspMAI	CTGCAG	1 cut(s)	1663
BspMI	ACCTGC	1 cut(s)	1652
BspPI	GGATC	5 cut(s)	324, 879, 914, 1680, 1693
BspT107I	GGYRCC	2 cut(s)	252, 538
BspTNI	GGTCTC	2 cut(s)	10, 146
BsrDI	GCAATG	4 cut(s)	227, 946, 1495, 1775
BsrGI	TGTACA	1 cut(s)	463
BssECI	CCNNGG	5 cut(s)	56, 429, 1090, 1128, 1584
BssNAI	GTATAC	2 cut(s)	426, 1441
BssNI	GRCGYC	3 cut(s)	23, 159, 539
BssT1I	CCWWGG	2 cut(s)	429, 1584
Bst1107I	GTATAC	2 cut(s)	426, 1441
Bst2UI	CCWGG	4 cut(s)	189, 510, 1073, 1091
Bst4CI	ACNGT	7 cut(s)	756, 804, 865, 969, 993, 1108, 1225
Bst6I	CTCTTC	3 cut(s)	119, 681, 1056
BstACI	GRCGYC	3 cut(s)	23, 159, 539
BstAPI	GCANNNNNTGC	1 cut(s)	1733
BstAUI	TGTACA	1 cut(s)	463
BstBAI	YACGTR	1 cut(s)	1058
BstC8I	GCNNGC	2 cut(s)	633, 952
BstDEI	CTNAG	8 cut(s)	7, 177, 364, 610, 831, 1338, 1429, 1763
BstENI	CCTNNNNNAGG	1 cut(s)	830
BstF5I	GGATG	7 cut(s)	70, 439, 1087, 1162, 1456, 1614, 1632
BstH2I	RGCGCY	1 cut(s)	542
BstHHI	GCGC	3 cut(s)	402, 541, 1649
BstMAI	GTCTC	5 cut(s)	6, 10, 146, 201, 207
BstMWI	GCNNNNNNNGC	4 cut(s)	779, 1007, 1646, 1733
BstNI	CCWGG	4 cut(s)	189, 510, 1073, 1091
BstNSI	RCATGY	2 cut(s)	950, 954
BstPAI	GACNNNNGTC	1 cut(s)	158
BstSCI	CCNGG	6 cut(s)	55, 187, 508, 1071, 1089, 1127
BstSFI	CTRYAG	1 cut(s)	1659
BstSLI	GKGCMC	3 cut(s)	388, 1209, 1363
BstV1I	GCAGC	3 cut(s)	64, 622, 1483
BstV2I	GAAGAC	1 cut(s)	365
BstX2I	RGATCY	4 cut(s)	114, 871, 1378, 1685
BstYI	RGATCY	4 cut(s)	114, 871, 1378, 1685
BstZ17I	GTATAC	2 cut(s)	426, 1441
Bsu36I	CCTNAGG	1 cut(s)	177
BsuRI	GGCC	5 cut(s)	42, 381, 1184, 1207, 1598
BtgZI	GCGATG	1 cut(s)	130
BtsCI	GGATG	7 cut(s)	70, 439, 1087, 1162, 1456, 1614, 1632
BtsIMutI	CAGTG	5 cut(s)	402, 889, 1116, 1221, 1507
BveI	ACCTGC	1 cut(s)	1652
Cac8I	GCNNGC	2 cut(s)	633, 952
CciI	TCATGA	3 cut(s)	759, 1239, 1790
CfoI	GCGC	3 cut(s)	402, 541, 1649
Cfr13I	GGNCC	8 cut(s)	172, 506, 512, 1094, 1205, 1206, 1415, 1596
CseI	GACGC	2 cut(s)	12, 788
CsiI	ACCWGGT	1 cut(s)	508
Csp6I	GTAC	5 cut(s)	253, 464, 861, 877, 994
CspCI	CAANNNNNGTGG	2 cut(s)	484, 519
CviQI	GTAC	5 cut(s)	253, 464, 861, 877, 994
DdeI	CTNAG	8 cut(s)	7, 177, 364, 610, 831, 1338, 1429, 1763
DinI	GGCGCC	1 cut(s)	540
DraIII	CACNNNGTG	1 cut(s)	1733
DriI	GACNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	1 cut(s)	40
Eam1104I	CTCTTC	3 cut(s)	119, 681, 1056
Eam1105I	GACNNNNNGTC	1 cut(s)	22
EarI	CTCTTC	3 cut(s)	119, 681, 1056
EciI	GGCGGA	1 cut(s)	16
Eco130I	CCWWGG	2 cut(s)	429, 1584
Eco24I	GRGCYC	1 cut(s)	1209
Eco31I	GGTCTC	2 cut(s)	10, 146
Eco47I	GGWCC	5 cut(s)	172, 506, 512, 1094, 1415
Eco57I	CTGAAG	3 cut(s)	374, 1026, 1374
Eco81I	CCTNAGG	1 cut(s)	177
EcoNI	CCTNNNNNAGG	1 cut(s)	830
EcoO109I	RGGNCCY	3 cut(s)	172, 1094, 1205
EcoRI	GAATTC	2 cut(s)	1123, 1243
EcoRII	CCWGG	4 cut(s)	187, 508, 1071, 1089
EcoT14I	CCWWGG	2 cut(s)	429, 1584
EcoT22I	ATGCAT	3 cut(s)	420, 952, 1784
EcoT38I	GRGCYC	1 cut(s)	1209
EgeI	GGCGCC	1 cut(s)	540
EheI	GGCGCC	1 cut(s)	540
ErhI	CCWWGG	2 cut(s)	429, 1584
Esp3I	CGTCTC	1 cut(s)	6
FalI	AAGNNNNNCTT	2 cut(s)	347, 379
FaqI	GGGAC	2 cut(s)	185, 1640
FauI	CCCGC	1 cut(s)	804
FbaI	TGATCA	1 cut(s)	811
FblI	GTMKAC	2 cut(s)	425, 1440
Fnu4HI	GCNGC	4 cut(s)	53, 636, 1182, 1497
FokI	GGATG	7 cut(s)	57, 446, 1094, 1169, 1443, 1621, 1639
FriOI	GRGCYC	1 cut(s)	1209
Fsp4HI	GCNGC	4 cut(s)	53, 636, 1182, 1497
FspBI	CTAG	2 cut(s)	1509, 1680
GlaI	GCGC	3 cut(s)	401, 540, 1648
GluI	GCNGC	4 cut(s)	53, 636, 1182, 1497
GsuI	CTGGAG	3 cut(s)	231, 865, 1094
HaeII	RGCGCY	1 cut(s)	542
HaeIII	GGCC	5 cut(s)	42, 381, 1184, 1207, 1598
HapII	CCGG	3 cut(s)	56, 1034, 1128
HgaI	GACGC	2 cut(s)	12, 788
HhaI	GCGC	3 cut(s)	402, 541, 1649
Hin1I	GRCGYC	3 cut(s)	23, 159, 539
Hin6I	GCGC	3 cut(s)	400, 539, 1647
HinP1I	GCGC	3 cut(s)	400, 539, 1647
HincII	GTYRAC	2 cut(s)	718, 1335
HindII	GTYRAC	2 cut(s)	718, 1335
HindIII	AAGCTT	1 cut(s)	134
HinfI	GANTC	8 cut(s)	1324, 1331, 1397, 1445, 1544, 1591, 1670, 1701
HpaI	GTTAAC	1 cut(s)	718
HpaII	CCGG	3 cut(s)	56, 1034, 1128
HphI	GGTGA	3 cut(s)	424, 536, 1600
Hpy166II	GTNNAC	8 cut(s)	386, 426, 506, 718, 820, 1267, 1335, 1441
Hpy188I	TCNGA	8 cut(s)	240, 249, 1006, 1021, 1308, 1341, 1576, 1675
Hpy8I	GTNNAC	8 cut(s)	386, 426, 506, 718, 820, 1267, 1335, 1441
Hpy99I	CGWCG	3 cut(s)	41, 83, 161
HpyAV	CCTTC	1 cut(s)	40
HpyCH4III	ACNGT	7 cut(s)	756, 804, 865, 969, 993, 1108, 1225
HpyCH4IV	ACGT	3 cut(s)	141, 159, 1057
HpyF10VI	GCNNNNNNNGC	4 cut(s)	779, 1007, 1646, 1733
HpyF3I	CTNAG	8 cut(s)	7, 177, 364, 610, 831, 1338, 1429, 1763
HpySE526I	ACGT	3 cut(s)	141, 159, 1057
Hsp92I	GRCGYC	3 cut(s)	23, 159, 539
HspAI	GCGC	3 cut(s)	400, 539, 1647
KasI	GGCGCC	1 cut(s)	538
KflI	GGGWCCC	1 cut(s)	172
KpnI	GGTACC	1 cut(s)	256
Ksp22I	TGATCA	1 cut(s)	811
KspAI	GTTAAC	1 cut(s)	718
LmnI	GCTCC	3 cut(s)	397, 1036, 1644
Lsp1109I	GCAGC	3 cut(s)	64, 622, 1483
MabI	ACCWGGT	1 cut(s)	508
MaeI	CTAG	2 cut(s)	1509, 1680
MaeII	ACGT	3 cut(s)	141, 159, 1057
MaeIII	GTNAC	2 cut(s)	1133, 1504
MflI	RGATCY	4 cut(s)	114, 871, 1378, 1685
MhlI	GDGCHC	3 cut(s)	388, 1209, 1363
MluCI	AATT	9 cut(s)	640, 666, 906, 1123, 1235, 1243, 1302, 1421, 1635
Mly113I	GGCGCC	1 cut(s)	539
MlyI	GAGTC	3 cut(s)	1340, 1553, 1600
MmeI	TCCRAC	3 cut(s)	328, 604, 1134
Mph1103I	ATGCAT	3 cut(s)	420, 952, 1784
MseI	TTAA	6 cut(s)	138, 446, 717, 807, 891, 1344
MslI	CAYNNNNRTG	1 cut(s)	949
MspA1I	CMGCKG	1 cut(s)	1321
MspI	CCGG	3 cut(s)	56, 1034, 1128
MspR9I	CCNGG	6 cut(s)	57, 189, 510, 1073, 1091, 1129
Mva1269I	GAATGC	2 cut(s)	578, 1585
MvaI	CCWGG	4 cut(s)	189, 510, 1073, 1091
MwoI	GCNNNNNNNGC	4 cut(s)	779, 1007, 1646, 1733
NarI	GGCGCC	1 cut(s)	539
NciI	CCSGG	2 cut(s)	57, 1129
NmeAIII	GCCGAG	1 cut(s)	175
NsiI	ATGCAT	3 cut(s)	420, 952, 1784
NspI	RCATGY	2 cut(s)	950, 954
PaeI	GCATGC	1 cut(s)	954
PagI	TCATGA	3 cut(s)	759, 1239, 1790
PcsI	WCGNNNNNNNCGW	3 cut(s)	87, 147, 153
PctI	GAATGC	2 cut(s)	578, 1585
PfeI	GAWTC	5 cut(s)	1324, 1397, 1445, 1670, 1701
PflFI	GACNNNGTC	1 cut(s)	510
PfoI	TCCNGGA	1 cut(s)	1071
PkrI	GCNGC	4 cut(s)	54, 637, 1183, 1498
PleI	GAGTC	3 cut(s)	1339, 1552, 1599
PluTI	GGCGCC	1 cut(s)	542
PpsI	GAGTC	3 cut(s)	1339, 1552, 1599
Ppu21I	YACGTR	1 cut(s)	1058
PpuMI	RGGWCCY	2 cut(s)	172, 1094
PshAI	GACNNNNGTC	1 cut(s)	158
PsiI	TTATAA	2 cut(s)	336, 645
Psp5II	RGGWCCY	2 cut(s)	172, 1094
Psp6I	CCWGG	4 cut(s)	187, 508, 1071, 1089
PspGI	CCWGG	4 cut(s)	187, 508, 1071, 1089
PspOMI	GGGCCC	1 cut(s)	1205
PspPI	GGNCC	8 cut(s)	172, 506, 512, 1094, 1205, 1206, 1415, 1596
PspPPI	RGGWCCY	2 cut(s)	172, 1094
PstI	CTGCAG	1 cut(s)	1663
PsuI	RGATCY	4 cut(s)	114, 871, 1378, 1685
PsyI	GACNNNGTC	1 cut(s)	510
PvuII	CAGCTG	1 cut(s)	1321
RsaI	GTAC	5 cut(s)	254, 465, 862, 878, 995
RsaNI	GTAC	5 cut(s)	253, 464, 861, 877, 994
RseI	CAYNNNNRTG	1 cut(s)	949
SaqAI	TTAA	6 cut(s)	138, 446, 717, 807, 891, 1344
SatI	GCNGC	4 cut(s)	53, 636, 1182, 1497
Sau96I	GGNCC	8 cut(s)	172, 506, 512, 1094, 1205, 1206, 1415, 1596
SbfI	CCTGCAGG	1 cut(s)	1663
ScaI	AGTACT	1 cut(s)	862
SchI	GAGTC	3 cut(s)	1340, 1553, 1600
ScrFI	CCNGG	6 cut(s)	57, 189, 510, 1073, 1091, 1129
SdaI	CCTGCAGG	1 cut(s)	1663
SduI	GDGCHC	3 cut(s)	388, 1209, 1363
SexAI	ACCWGGT	1 cut(s)	508
SfcI	CTRYAG	1 cut(s)	1659
SfoI	GGCGCC	1 cut(s)	540
SinI	GGWCC	5 cut(s)	172, 506, 512, 1094, 1415
SmiMI	CAYNNNNRTG	1 cut(s)	949
SmlI	CTYRAG	2 cut(s)	104, 131
SmoI	CTYRAG	2 cut(s)	104, 131
SpeI	ACTAGT	1 cut(s)	1508
SphI	GCATGC	1 cut(s)	954
Sse8387I	CCTGCAGG	1 cut(s)	1663
Sse9I	AATT	9 cut(s)	640, 666, 906, 1123, 1235, 1243, 1302, 1421, 1635
SsiI	CCGC	4 cut(s)	27, 109, 797, 1181
SspDI	GGCGCC	1 cut(s)	538
SspI	AATATT	2 cut(s)	473, 1261
SspMI	CTAG	2 cut(s)	1509, 1680
StyD4I	CCNGG	6 cut(s)	55, 187, 508, 1071, 1089, 1127
StyI	CCWWGG	2 cut(s)	429, 1584
TaaI	ACNGT	7 cut(s)	756, 804, 865, 969, 993, 1108, 1225
TaiI	ACGT	3 cut(s)	144, 162, 1060
TaqII	GACCGA	1 cut(s)	170
TasI	AATT	9 cut(s)	640, 666, 906, 1123, 1235, 1243, 1302, 1421, 1635
TatI	WGTACW	3 cut(s)	463, 860, 876
TauI	GCSGC	1 cut(s)	1184
TfiI	GAWTC	5 cut(s)	1324, 1397, 1445, 1670, 1701
Tru1I	TTAA	6 cut(s)	138, 446, 717, 807, 891, 1344
Tru9I	TTAA	6 cut(s)	138, 446, 717, 807, 891, 1344
TscAI	CASTG	5 cut(s)	409, 889, 1123, 1228, 1507
TseI	GCWGC	3 cut(s)	52, 635, 1496
TspGWI	ACGGA	1 cut(s)	1621
TspRI	CASTG	5 cut(s)	409, 889, 1123, 1228, 1507
Tth111I	GACNNNGTC	1 cut(s)	510
VneI	GTGCAC	1 cut(s)	384
VpaK11BI	GGWCC	5 cut(s)	172, 506, 512, 1094, 1415
XagI	CCTNNNNNAGG	1 cut(s)	830
XapI	RAATTY	3 cut(s)	666, 1123, 1243
XceI	RCATGY	2 cut(s)	950, 954
XmiI	GTMKAC	2 cut(s)	425, 1440
XspI	CTAG	2 cut(s)	1509, 1680
ZraI	GACGTC	1 cut(s)	160
ZrmI	AGTACT	1 cut(s)	862
Zsp2I	ATGCAT	3 cut(s)	420, 952, 1784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.