Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002947

Physical Location & Seq

Genomic Coordinates Forward (+)

34101216 .. 34107074

Gene Structure 5859 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000013619

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGTCTCAGGAGACGACTTGGCGTCCGCCTTCTGCGACGGCAACTTTTGGCAGCCGGGGTTTCGGTTCCATCCCACCGACGAGGAACTCGTCCTCTACTATCTCAAGCGGAAGATCTGTAAGAAGAGGCTCAAGCTTAACGTCATCGCCGAGACTGACGTCTATAAGTGGGACCCTGAGGAACTTCCTGGATTGTCTTTATTGAAAACTGGAGACAGGCAATGGTTCTTTTTCAGTCCGAGAGATCGGAAGTACCCTAATGGGGGGAGATCAAACAGGGCAACCAGACATGGGTATTGGAAAGCAACTGGAAAGGATCGCAACATTTCCTGTTATAACCGATCAGTTGGACTGAAGAAGACCTTAGTTTTCTATAAAGGCCGTGCACCTACTGGGGAGCGTACTGATTGGGTGATGCATGAGTATACCTTGGATGAGGAGGAGTTAAAGAGATGCCAGAATGTACAGGAATATTATGCTCTTTACAAAGTTTTCAAGAAAAGTGGACCTGGTCCTAAAAATGGTGAGCAATATGGGGCGCCATTTAGAGAAGAAGATTGGGCTGATGATGAATGCCCGATAATAAATAGCTCTGCTGATAGGGAAATCTCAGTTGAGCAAGTTGGAGAGCTTGCTGCTAATTATAATGTGAAACCTTTTGGAGAAATTCCATTAAAGCAAGTCGAAGAGATTACTGCTAATGGTCATGTGAACATTAACAGTGAAGTCCATTCTACAATAGATGACTTGGAAGAGTTCATGAAACAGATTGCTGATGACGCTGTGCTTGACCTGCCACAGTTTAATGATCATGTTCACACTCTATCTCAGGTTGTTAGTGAAGAAGAAACACAAAGTACTGTGGTGGATCTGTACTCCAGTGAAGTTAAATGTCCACAATCGGTTATGACTTTTGATCCTAGTGGTCAGCAGGGCAATGCACATGCATGCTTTGACTTCACACAGTCAGCTACTTCACAGATGCAACTGTACGAGGCATCTGAAGCAACTGCTTCTGACGTTCATCAACCGGAGCCTTTCACTCCCATACTACGGGAGGAGGACTTCCTGGAGATGGATGATCTCCTGGGTCCTGAACCTACTATTTCAAACACTGGGAATTCTGGGGCTAACTTGCAGTTTGATGAGTTGGATGGATTTGACTTCCATGATGCGGCCATGTTTTTCAATGACATAGGGCCCATTGAACAAGGAACTGTTTCTCATCAATTCATGAATTCAATGGAGGGTAATATTGTAAACCAGTTTAATTGCCAGATACAACCAGCACCTCCAATTCAGATCAACCATCAGCTGAATGAAGAGTCAACTCAGATTAACAATCAGCTATGGGCACAGAATGAAAGGCAAGATCTCTATACTTCAGCAGAATCAAAGCAGGGGTCTGGACCTCAATTCAACTCAGGTGTGGTATACGATTCGTCAAATCATCCTCCACAAGCAAATCAAAATCAAAGTGGCAATGAAGCTGCCAGTGTTACTAGTCAGTTTTCTTCTGCCCTATGGTCTTTTGTGGAGTCTATACCTACTACTCCTGCATCTGCATCGGAGAATGCCTTGGTGAGTCGGGCCTTTGAACGGATGAATAGCTTTAGCAGGATGAGAATAATTGCGAGGAGCGCAAATGTCCCTGCAGGAACTAATTGCAACGGTCTTCATGATAATGAACGGAAATTCAGACATATATTTCGAGGAGGCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

575

Amino Acids

64.68

Weight (kDa)

4.83

Isoelectric Point (pI)

44.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	19 - 144	9.7e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34180 AT1G34180 AT1G34180 AT1G34180 AT1G34190
fragaria_vesca	FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_2g12690 FvH4_6g07970
malus_domestica	MD05G1037700.v1.1 MD10G1041500.v1.1
prunus_persica	Prupe.8G045800_v2.0.a1 Prupe.8G045800_v2.0.a1
pyrus_communis	pycom05g02790 pycom10g02860
rosa_chinensis	RchiOBHm_Chr3g0457681 RchiOBHm_Chr6g0273431
rosa_laevigata	RLG00000013619 RLG00000025196
rosa_multiflora	Rmu_co8212274.1_g000001 Rmu_sc0005891.1_g000016 Rmu_sc0007395.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421580 Rroxscaffold_7G00195380
rosa_rugosa	Rorug03G0022500 Rorug06G0074700
rosa_samantha	Rh3AG083200 Rh3BG085700 Rh3CG086000 Rh3DG086600 Rh6AG189800 Rh6BG193300 Rh6CG193000 Rh6DG184500
rosa_wichuraiana	Rw3G007120 Rw6G016520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	336, 645
AatII	GACGTC	1 cut(s)	162
Acc36I	ACCTGC	1 cut(s)	801
AccB1I	GGYRCC	1 cut(s)	538
AccI	GTMKAC	2 cut(s)	425, 1434
AciI	CCGC	3 cut(s)	27, 109, 1175
AclWI	GGATC	3 cut(s)	324, 876, 911
AcoI	YGGCCR	1 cut(s)	1176
AcsI	RAATTY	4 cut(s)	666, 1120, 1237, 1694
AcuI	CTGAAG	3 cut(s)	374, 1023, 1368
AcyI	GRCGYC	3 cut(s)	23, 159, 539
AfaI	GTAC	6 cut(s)	254, 403, 465, 859, 875, 992
AfiI	CCNNNNNNNGG	8 cut(s)	262, 263, 291, 521, 1053, 1075, 1174, 1599
AgsI	TTSAA	8 cut(s)	205, 496, 1110, 1189, 1208, 1242, 1420, 1598
AhdI	GACNNNNNGTC	1 cut(s)	22
AhlI	ACTAGT	1 cut(s)	1502
AjnI	CCWGG	4 cut(s)	187, 508, 1068, 1086
AluBI	AGCT	8 cut(s)	136, 591, 631, 971, 1315, 1348, 1490, 1611
AluI	AGCT	8 cut(s)	136, 591, 631, 971, 1315, 1348, 1490, 1611
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	4 cut(s)	6, 10, 146, 207
Alw44I	GTGCAC	1 cut(s)	384
AlwI	GGATC	3 cut(s)	324, 876, 911
AoxI	GGCC	4 cut(s)	379, 1176, 1199, 1590
ApaI	GGGCCC	1 cut(s)	1203
ApaLI	GTGCAC	1 cut(s)	384
ApeKI	GCWGC	3 cut(s)	52, 635, 1490
ApoI	RAATTY	4 cut(s)	666, 1120, 1237, 1694
ArsI	GACNNNNNNTTYG	4 cut(s)	1388, 1420, 1692, 1724
Asp700I	GAANNNNTTC	1 cut(s)	1219
AspLEI	GCGC	2 cut(s)	541, 1643
AspS9I	GGNCC	8 cut(s)	172, 506, 512, 1091, 1199, 1200, 1409, 1590
AsuC2I	CCSGG	1 cut(s)	57
AsuHPI	GGTGA	3 cut(s)	424, 536, 1594
AvaII	GGWCC	5 cut(s)	172, 506, 512, 1091, 1409
AxyI	CCTNAGG	1 cut(s)	177
BaeGI	GKGCMC	3 cut(s)	388, 1203, 1357
BanI	GGYRCC	1 cut(s)	538
BanII	GRGCYC	1 cut(s)	1203
BbsI	GAAGAC	2 cut(s)	365, 1667
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	3 cut(s)	64, 622, 1477
BccI	CCATC	4 cut(s)	78, 1069, 1148, 1317
BceAI	ACGGC	2 cut(s)	55, 366
BcgI	CGANNNNNNTGC	2 cut(s)	1548, 1582
BciT130I	CCWGG	4 cut(s)	189, 510, 1070, 1088
BclI	TGATCA	1 cut(s)	808
BcnI	CCSGG	1 cut(s)	57
BcoDI	GTCTC	4 cut(s)	6, 10, 146, 207
BcuI	ACTAGT	1 cut(s)	1502
BfaI	CTAG	2 cut(s)	921, 1503
BfmI	CTRYAG	1 cut(s)	1653
BfoI	RGCGCY	1 cut(s)	542
BfuAI	ACCTGC	1 cut(s)	801
BglII	AGATCT	2 cut(s)	114, 1372
BisI	GCNGC	4 cut(s)	53, 636, 1176, 1491
BlsI	GCNGC	4 cut(s)	54, 637, 1177, 1492
BmcAI	AGTACT	1 cut(s)	859
Bme1390I	CCNGG	5 cut(s)	57, 189, 510, 1070, 1088
Bme18I	GGWCC	5 cut(s)	172, 506, 512, 1091, 1409
BmeRI	GACNNNNNGTC	1 cut(s)	22
BmgT120I	GGNCC	8 cut(s)	172, 506, 512, 1091, 1199, 1200, 1409, 1590
BmiI	GGNNCC	7 cut(s)	68, 173, 174, 540, 1035, 1092, 1201
BmrFI	CCNGG	5 cut(s)	57, 189, 510, 1070, 1088
BmrI	ACTGGG	2 cut(s)	402, 1125
BmsI	GCATC	7 cut(s)	405, 443, 972, 1007, 1162, 1568, 1574
BmuI	ACTGGG	2 cut(s)	402, 1125
BoxI	GACNNNNGTC	1 cut(s)	158
BpiI	GAAGAC	2 cut(s)	365, 1667
BpmI	CTGGAG	3 cut(s)	231, 862, 1091
BpuEI	CTTGAG	2 cut(s)	89, 116
BpuMI	CCSGG	1 cut(s)	57
BsaHI	GRCGYC	3 cut(s)	23, 159, 539
BsaI	GGTCTC	1 cut(s)	10
BsaJI	CCNNGG	4 cut(s)	56, 429, 1087, 1578
BsaWI	WCCGGW	1 cut(s)	1030
Bsc4I	CCNNNNNNNGG	8 cut(s)	262, 263, 291, 521, 1053, 1075, 1174, 1599
Bse1I	ACTGG	7 cut(s)	214, 313, 397, 879, 1120, 1264, 1494
Bse21I	CCTNAGG	1 cut(s)	177
Bse3DI	GCAATG	3 cut(s)	227, 943, 1489
BseBI	CCWGG	4 cut(s)	189, 510, 1070, 1088
BseDI	CCNNGG	4 cut(s)	56, 429, 1087, 1578
BseGI	GGATG	7 cut(s)	70, 439, 1084, 1159, 1450, 1608, 1626
BseLI	CCNNNNNNNGG	8 cut(s)	262, 263, 291, 521, 1053, 1075, 1174, 1599
BseMI	GCAATG	3 cut(s)	227, 943, 1489
BseMII	CTCAG	6 cut(s)	21, 168, 624, 842, 1346, 1437
BseNI	ACTGG	7 cut(s)	214, 313, 397, 879, 1120, 1264, 1494
BseRI	GAGGAG	4 cut(s)	452, 455, 1073, 1651
BseSI	GKGCMC	3 cut(s)	388, 1203, 1357
BseXI	GCAGC	3 cut(s)	64, 622, 1477
BshFI	GGCC	4 cut(s)	381, 1178, 1201, 1592
BshNI	GGYRCC	1 cut(s)	538
BsiHKAI	GWGCWC	1 cut(s)	388
BsiSI	CCGG	2 cut(s)	56, 1031
BslFI	GGGAC	2 cut(s)	185, 1634
BslI	CCNNNNNNNGG	8 cut(s)	262, 263, 291, 521, 1053, 1075, 1174, 1599
BsmAI	GTCTC	4 cut(s)	6, 10, 146, 207
BsmBI	CGTCTC	1 cut(s)	6
BsmFI	GGGAC	2 cut(s)	185, 1634
BsmI	GAATGC	2 cut(s)	578, 1579
BsnI	GGCC	4 cut(s)	381, 1178, 1201, 1592
Bso31I	GGTCTC	1 cut(s)	10
Bsp120I	GGGCCC	1 cut(s)	1199
Bsp1286I	GDGCHC	3 cut(s)	388, 1203, 1357
Bsp1407I	TGTACA	1 cut(s)	463
BspACI	CCGC	3 cut(s)	27, 109, 1175
BspANI	GGCC	4 cut(s)	381, 1178, 1201, 1592
BspCNI	CTCAG	6 cut(s)	20, 169, 623, 841, 1345, 1436
BspHI	TCATGA	3 cut(s)	759, 1233, 1678
BspLI	GGNNCC	7 cut(s)	68, 173, 174, 540, 1035, 1092, 1201
BspMAI	CTGCAG	1 cut(s)	1657
BspMI	ACCTGC	1 cut(s)	801
BspPI	GGATC	3 cut(s)	324, 876, 911
BspT107I	GGYRCC	1 cut(s)	538
BspTNI	GGTCTC	1 cut(s)	10
BsrDI	GCAATG	3 cut(s)	227, 943, 1489
BsrGI	TGTACA	1 cut(s)	463
BsrI	ACTGG	7 cut(s)	214, 313, 397, 879, 1120, 1264, 1494
BssECI	CCNNGG	4 cut(s)	56, 429, 1087, 1578
BssNAI	GTATAC	2 cut(s)	426, 1435
BssNI	GRCGYC	3 cut(s)	23, 159, 539
BssT1I	CCWWGG	2 cut(s)	429, 1578
Bst1107I	GTATAC	2 cut(s)	426, 1435
Bst2UI	CCWGG	4 cut(s)	189, 510, 1070, 1088
Bst4CI	ACNGT	7 cut(s)	722, 801, 862, 966, 990, 1219, 1673
Bst6I	CTCTTC	4 cut(s)	119, 681, 747, 1317
BstACI	GRCGYC	3 cut(s)	23, 159, 539
BstAUI	TGTACA	1 cut(s)	463
BstC8I	GCNNGC	2 cut(s)	633, 949
BstDEI	CTNAG	7 cut(s)	7, 177, 364, 610, 828, 1332, 1423
BstF5I	GGATG	7 cut(s)	70, 439, 1084, 1159, 1450, 1608, 1626
BstH2I	RGCGCY	1 cut(s)	542
BstHHI	GCGC	2 cut(s)	541, 1643
BstMAI	GTCTC	4 cut(s)	6, 10, 146, 207
BstMWI	GCNNNNNNNGC	4 cut(s)	779, 793, 1004, 1640
BstNI	CCWGG	4 cut(s)	189, 510, 1070, 1088
BstNSI	RCATGY	2 cut(s)	947, 951
BstPAI	GACNNNNGTC	1 cut(s)	158
BstSCI	CCNGG	5 cut(s)	55, 187, 508, 1068, 1086
BstSFI	CTRYAG	1 cut(s)	1653
BstSLI	GKGCMC	3 cut(s)	388, 1203, 1357
BstV1I	GCAGC	3 cut(s)	64, 622, 1477
BstV2I	GAAGAC	2 cut(s)	365, 1667
BstX2I	RGATCY	3 cut(s)	114, 868, 1372
BstYI	RGATCY	3 cut(s)	114, 868, 1372
BstZ17I	GTATAC	2 cut(s)	426, 1435
Bsu36I	CCTNAGG	1 cut(s)	177
BsuRI	GGCC	4 cut(s)	381, 1178, 1201, 1592
BtgZI	GCGATG	1 cut(s)	130
BtsCI	GGATG	7 cut(s)	70, 439, 1084, 1159, 1450, 1608, 1626
BtsIMutI	CAGTG	4 cut(s)	727, 886, 1113, 1501
BveI	ACCTGC	1 cut(s)	801
Cac8I	GCNNGC	2 cut(s)	633, 949
CciI	TCATGA	3 cut(s)	759, 1233, 1678
CfoI	GCGC	2 cut(s)	541, 1643
Cfr13I	GGNCC	8 cut(s)	172, 506, 512, 1091, 1199, 1200, 1409, 1590
CseI	GACGC	2 cut(s)	12, 788
CsiI	ACCWGGT	1 cut(s)	508
Csp6I	GTAC	6 cut(s)	253, 402, 464, 858, 874, 991
CspCI	CAANNNNNGTGG	2 cut(s)	484, 519
CviQI	GTAC	6 cut(s)	253, 402, 464, 858, 874, 991
DdeI	CTNAG	7 cut(s)	7, 177, 364, 610, 828, 1332, 1423
DinI	GGCGCC	1 cut(s)	540
DriI	GACNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	1 cut(s)	1176
Eam1104I	CTCTTC	4 cut(s)	119, 681, 747, 1317
Eam1105I	GACNNNNNGTC	1 cut(s)	22
EarI	CTCTTC	4 cut(s)	119, 681, 747, 1317
EciI	GGCGGA	1 cut(s)	16
Eco130I	CCWWGG	2 cut(s)	429, 1578
Eco24I	GRGCYC	1 cut(s)	1203
Eco31I	GGTCTC	1 cut(s)	10
Eco47I	GGWCC	5 cut(s)	172, 506, 512, 1091, 1409
Eco57I	CTGAAG	3 cut(s)	374, 1023, 1368
Eco81I	CCTNAGG	1 cut(s)	177
EcoO109I	RGGNCCY	3 cut(s)	172, 1091, 1199
EcoRI	GAATTC	2 cut(s)	1120, 1237
EcoRII	CCWGG	4 cut(s)	187, 508, 1068, 1086
EcoT14I	CCWWGG	2 cut(s)	429, 1578
EcoT22I	ATGCAT	2 cut(s)	420, 949
EcoT38I	GRGCYC	1 cut(s)	1203
EgeI	GGCGCC	1 cut(s)	540
EheI	GGCGCC	1 cut(s)	540
ErhI	CCWWGG	2 cut(s)	429, 1578
Esp3I	CGTCTC	1 cut(s)	6
FalI	AAGNNNNNCTT	2 cut(s)	347, 379
FaqI	GGGAC	2 cut(s)	185, 1634
FbaI	TGATCA	1 cut(s)	808
FblI	GTMKAC	2 cut(s)	425, 1434
Fnu4HI	GCNGC	4 cut(s)	53, 636, 1176, 1491
FokI	GGATG	7 cut(s)	57, 446, 1091, 1166, 1437, 1615, 1633
FriOI	GRGCYC	1 cut(s)	1203
Fsp4HI	GCNGC	4 cut(s)	53, 636, 1176, 1491
FspBI	CTAG	2 cut(s)	921, 1503
GlaI	GCGC	2 cut(s)	540, 1642
GluI	GCNGC	4 cut(s)	53, 636, 1176, 1491
GsuI	CTGGAG	3 cut(s)	231, 862, 1091
HaeII	RGCGCY	1 cut(s)	542
HaeIII	GGCC	4 cut(s)	381, 1178, 1201, 1592
HapII	CCGG	2 cut(s)	56, 1031
HgaI	GACGC	2 cut(s)	12, 788
HhaI	GCGC	2 cut(s)	541, 1643
Hin1I	GRCGYC	3 cut(s)	23, 159, 539
Hin6I	GCGC	2 cut(s)	539, 1641
HinP1I	GCGC	2 cut(s)	539, 1641
HincII	GTYRAC	1 cut(s)	1329
HindII	GTYRAC	1 cut(s)	1329
HindIII	AAGCTT	1 cut(s)	134
HinfI	GANTC	5 cut(s)	1325, 1391, 1439, 1538, 1585
HpaII	CCGG	2 cut(s)	56, 1031
HphI	GGTGA	3 cut(s)	424, 536, 1594
Hpy166II	GTNNAC	9 cut(s)	386, 426, 506, 712, 817, 896, 1261, 1329, 1435
Hpy188I	TCNGA	8 cut(s)	240, 249, 1003, 1018, 1302, 1335, 1570, 1700
Hpy188III	TCNNGA	7 cut(s)	9, 496, 760, 1094, 1234, 1407, 1679
Hpy8I	GTNNAC	9 cut(s)	386, 426, 506, 712, 817, 896, 1261, 1329, 1435
Hpy99I	CGWCG	2 cut(s)	41, 83
HpyAV	CCTTC	1 cut(s)	40
HpyCH4III	ACNGT	7 cut(s)	722, 801, 862, 966, 990, 1219, 1673
HpyCH4IV	ACGT	3 cut(s)	141, 159, 1020
HpyF10VI	GCNNNNNNNGC	4 cut(s)	779, 793, 1004, 1640
HpyF3I	CTNAG	7 cut(s)	7, 177, 364, 610, 828, 1332, 1423
HpySE526I	ACGT	3 cut(s)	141, 159, 1020
Hsp92I	GRCGYC	3 cut(s)	23, 159, 539
HspAI	GCGC	2 cut(s)	539, 1641
KasI	GGCGCC	1 cut(s)	538
KflI	GGGWCCC	1 cut(s)	172
Ksp22I	TGATCA	1 cut(s)	808
LmnI	GCTCC	3 cut(s)	397, 1033, 1638
Lsp1109I	GCAGC	3 cut(s)	64, 622, 1477
LweI	GCATC	7 cut(s)	405, 443, 972, 1007, 1162, 1568, 1574
MabI	ACCWGGT	1 cut(s)	508
MaeI	CTAG	2 cut(s)	921, 1503
MaeII	ACGT	3 cut(s)	141, 159, 1020
MaeIII	GTNAC	1 cut(s)	1498
MflI	RGATCY	3 cut(s)	114, 868, 1372
MhlI	GDGCHC	3 cut(s)	388, 1203, 1357
Mly113I	GGCGCC	1 cut(s)	539
MlyI	GAGTC	3 cut(s)	1334, 1547, 1594
MmeI	TCCRAC	3 cut(s)	328, 604, 1131
Mph1103I	ATGCAT	2 cut(s)	420, 949
MroXI	GAANNNNTTC	1 cut(s)	1219
MseI	TTAA	8 cut(s)	138, 446, 674, 717, 804, 888, 1269, 1338
MslI	CAYNNNNRTG	2 cut(s)	946, 1683
MspA1I	CMGCKG	1 cut(s)	1315
MspI	CCGG	2 cut(s)	56, 1031
MspR9I	CCNGG	5 cut(s)	57, 189, 510, 1070, 1088
Mva1269I	GAATGC	2 cut(s)	578, 1579
MvaI	CCWGG	4 cut(s)	189, 510, 1070, 1088
MwoI	GCNNNNNNNGC	4 cut(s)	779, 793, 1004, 1640
NarI	GGCGCC	1 cut(s)	539
NciI	CCSGG	1 cut(s)	57
NlaIV	GGNNCC	7 cut(s)	68, 173, 174, 540, 1035, 1092, 1201
NmeAIII	GCCGAG	1 cut(s)	175
NsiI	ATGCAT	2 cut(s)	420, 949
NspI	RCATGY	2 cut(s)	947, 951
PaeI	GCATGC	1 cut(s)	951
PagI	TCATGA	3 cut(s)	759, 1233, 1678
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 147
PctI	GAATGC	2 cut(s)	578, 1579
PdmI	GAANNNNTTC	1 cut(s)	1219
PfeI	GAWTC	2 cut(s)	1391, 1439
PflFI	GACNNNGTC	1 cut(s)	510
PfoI	TCCNGGA	2 cut(s)	187, 1068
PkrI	GCNGC	4 cut(s)	54, 637, 1177, 1492
PleI	GAGTC	3 cut(s)	1333, 1546, 1593
PluTI	GGCGCC	1 cut(s)	542
PpsI	GAGTC	3 cut(s)	1333, 1546, 1593
PpuMI	RGGWCCY	2 cut(s)	172, 1091
PshAI	GACNNNNGTC	1 cut(s)	158
PsiI	TTATAA	2 cut(s)	336, 645
Psp5II	RGGWCCY	2 cut(s)	172, 1091
Psp6I	CCWGG	4 cut(s)	187, 508, 1068, 1086
PspGI	CCWGG	4 cut(s)	187, 508, 1068, 1086
PspN4I	GGNNCC	7 cut(s)	68, 173, 174, 540, 1035, 1092, 1201
PspOMI	GGGCCC	1 cut(s)	1199
PspPI	GGNCC	8 cut(s)	172, 506, 512, 1091, 1199, 1200, 1409, 1590
PspPPI	RGGWCCY	2 cut(s)	172, 1091
PstI	CTGCAG	1 cut(s)	1657
PsuI	RGATCY	3 cut(s)	114, 868, 1372
PsyI	GACNNNGTC	1 cut(s)	510
PvuII	CAGCTG	1 cut(s)	1315
RsaI	GTAC	6 cut(s)	254, 403, 465, 859, 875, 992
RsaNI	GTAC	6 cut(s)	253, 402, 464, 858, 874, 991
RseI	CAYNNNNRTG	2 cut(s)	946, 1683
SaqAI	TTAA	8 cut(s)	138, 446, 674, 717, 804, 888, 1269, 1338
SatI	GCNGC	4 cut(s)	53, 636, 1176, 1491
Sau96I	GGNCC	8 cut(s)	172, 506, 512, 1091, 1199, 1200, 1409, 1590
SbfI	CCTGCAGG	1 cut(s)	1657
ScaI	AGTACT	1 cut(s)	859
SchI	GAGTC	3 cut(s)	1334, 1547, 1594
ScrFI	CCNGG	5 cut(s)	57, 189, 510, 1070, 1088
SdaI	CCTGCAGG	1 cut(s)	1657
SduI	GDGCHC	3 cut(s)	388, 1203, 1357
SexAI	ACCWGGT	1 cut(s)	508
SfaNI	GCATC	7 cut(s)	405, 443, 972, 1007, 1162, 1568, 1574
SfcI	CTRYAG	1 cut(s)	1653
SfoI	GGCGCC	1 cut(s)	540
SinI	GGWCC	5 cut(s)	172, 506, 512, 1091, 1409
SmiMI	CAYNNNNRTG	2 cut(s)	946, 1683
SmlI	CTYRAG	2 cut(s)	104, 131
SmoI	CTYRAG	2 cut(s)	104, 131
SpeI	ACTAGT	1 cut(s)	1502
SphI	GCATGC	1 cut(s)	951
Sse8387I	CCTGCAGG	1 cut(s)	1657
SsiI	CCGC	3 cut(s)	27, 109, 1175
SspDI	GGCGCC	1 cut(s)	538
SspI	AATATT	2 cut(s)	473, 1255
SspMI	CTAG	2 cut(s)	921, 1503
StyD4I	CCNGG	5 cut(s)	55, 187, 508, 1068, 1086
StyI	CCWWGG	2 cut(s)	429, 1578
TaaI	ACNGT	7 cut(s)	722, 801, 862, 966, 990, 1219, 1673
TaiI	ACGT	3 cut(s)	144, 162, 1023
TaqI	TCGA	2 cut(s)	684, 1711
TatI	WGTACW	3 cut(s)	463, 857, 873
TauI	GCSGC	1 cut(s)	1178
TfiI	GAWTC	2 cut(s)	1391, 1439
Tru1I	TTAA	8 cut(s)	138, 446, 674, 717, 804, 888, 1269, 1338
Tru9I	TTAA	8 cut(s)	138, 446, 674, 717, 804, 888, 1269, 1338
TscAI	CASTG	4 cut(s)	727, 886, 1120, 1501
TseI	GCWGC	3 cut(s)	52, 635, 1490
TspGWI	ACGGA	2 cut(s)	1615, 1705
TspRI	CASTG	4 cut(s)	727, 886, 1120, 1501
Tth111I	GACNNNGTC	1 cut(s)	510
VneI	GTGCAC	1 cut(s)	384
VpaK11BI	GGWCC	5 cut(s)	172, 506, 512, 1091, 1409
XapI	RAATTY	4 cut(s)	666, 1120, 1237, 1694
XceI	RCATGY	2 cut(s)	947, 951
XmiI	GTMKAC	2 cut(s)	425, 1434
XmnI	GAANNNNTTC	1 cut(s)	1219
XspI	CTAG	2 cut(s)	921, 1503
ZraI	GACGTC	1 cut(s)	160
ZrmI	AGTACT	1 cut(s)	859
Zsp2I	ATGCAT	2 cut(s)	420, 949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.