Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005132

Physical Location & Seq

Genomic Coordinates Forward (+)

3639607 .. 3645634

Gene Structure 6028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g03120.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2907 bp

ATGCCAATGATCAGTCCAGCAACTTCCTTGTCACGCAGTGACAGTTGTGTATCTAGCTGCAGTGAGTTTTCTGTTGATGTGAGCTCATGCAATAGGGGTATTCAAGAGGAAAACACGACAGGCAGTTCTCAAGAGGATCCCATTTGTCAGTCTAATGGGAGATTACAACACTCAAGCATTGGACATCCAGTAAATGGAATTGATAGATCAAAAAAACAGAGGCAAATCAACCTGAGCGAAAGTAGTTGTGGTAGTGATGTGTATACCGTAAGAGATGTTCAGATTATGCAGACAAGCGATGACCATGACACAAAAGGTAATGTTAATGCAAACACTGGTTCGTATAGTGATGGAACTGAGAACTCAAATTCTTTCGAAGATGATACAAATGCTGAGATATGGGAACCCCCTGAACCTGATGATCCAGAGGATGACATGGAGGGTAGTGTTGCTTTCAATGATGACGACGAAGAGGAATGTGGTGATGGCATGAAATGGGGTAAACCGAGTTCTTTGAGTCATTATAGAGATGAAGGAAGTGGGATTTATAGGTTTAAAGAGGAAAAACAAAGAGCAATGGAAGCAGTGATTAATGGAAAGTTTAAAGCCCTGATCAGTCAGCTACTTAAATCCGTGGGTGTTGCATCATTGGGGGAGGGTGGTGAAAGTTGGGTGGACATTATTGCTTCTTTGTCATGGGAAGCTGCTTCATTTTTAAAACCTGATGCTGTTGTTGGTAAAGCAATCGATCCAGATGGCTACGTGAAAGTAAAATGCATCGCAACTGGTGTTCGCAGCCAAAGTCAACTAGTGAAAGGTTTGGTCTTCAAAAAGCATGCTGCACACAAGCATATGTCGACCAAGTACAAGAACCCAAGGTTGTTGCTAATCAAGGGAGTACTTGGTCAGTCTTCAAGTGGATTGTCATCCTTTGATTCAATGGAACAGGAAAAAGGTTATCTGAAGTTTGTCATCGAAATGTTAGAACTGTGCCATCCAGATGTGATTTTAGTGGAAAAAACTGTTTCTCGTGATATTCAAGAGTCTATTCTTGACAAAGGAATGACACTGATCGTTGACATGAAGCTCCATCGCCTAGAGAGAGTTGCTCGTTGTACTGGATCACCAATTTTGTCATCAGATACAATGACGAGTGAAAAGCTAAAAAAGTGCGACTCTTTTCACATTGAAAAATTTAAAGAGGAACATGCTGGAGGTGGAGGAAAGGTCCCAAGTAAAACATTAATGTTTATTGAGGGCTGTCCTACACGCCTTGGCTGTACGATTTTGTTGAAAGGAGCACAGAGTGATGAATTGAAGAAGGTCAAGTGTGTAGTGCAGTGTGCAGTTATTCTGGCGTATCATTTAATTCATGAGACTGCTTTCCTTGTTGACCAGAGAGCAATGTTCTCTACACTTCCATTTGCTGATGTAGAAACTGATTTGTCCACTGATAAAGAAACCCTTAATTTAGGATCTATTAACCCATGTGTTCATCAGAATACAGAGACTAATGCTGAAACTGGGTCTGATACAGTTGATATTCCCAGTTCCAATGGATTTAATGAAGGATGTTCCCACGATTCTACCTTGGAATTTGAAGGCCATTCCACTTCCGATGCATCTTACAACCCTGCTGTACTTCCTGGCTTCTCGTCCATTTCAGCATCATTAAGGAAAGTTATAAGGGAGAATTTTCCTCAAGCATCTTCTTCTTATCAGTCTCTTTCTTCATACTTTGGATTCAGTGGAAGAGAACTGAATGACCCGATCACAAGATCTGTTTCTGCTTGTACAACTCCTGAGGCAACTGATCATTGTGATGTTGAAGATAAAGGTAGTTTCCATGAAGAGAGATCGCTTAATGGGCATAATCAGACTTCATTTACATGCTCAGAAGCTTCTCTTGAGGTGAAAGAAAATGGTGGAAATAGTGAAGATCAAATGAAAAGTAAGAACCAAATTAGCCATGTGTTGGATTCTCAGAGTATTTTGGTTTTGATGTCTAGCCAAAATGCTTTAAGAGGCACTGTTTGTGAGCAGAGCCATTTTTCTCATATCATGTTCTACAAGAATTTCGATATCCCCATCGGAAAGTTTCTTCAAGATAATTTACTCAATCAGCAAAGCCAGTGTACATCATGTGGTGAACTTCCAGAAGCTCACTTCTACCATTATGCACATCGTAACAAGCAGCTTACTATCCGAGTTAAACGGCTCCCTGGAGAAGTGCATTTGCCTGGTGAAGCAGAAGGGAAACTTTGGATGTGGAGTCGATGTGGTAAATGTAAATCTAGGAATGGAATCTCAAAGTGTACAAAAAGAGTATTGATTTCCACTTCTGCACGTTGTCTATCATTTGGAAATTTCCTGGAGCTCAATTTCTCGAACCCATCTTTGTCTAATTTACTTTCTAGCTGCGGCCATTCTTTGCAGAAGGACTTTCTCTACTTCTTTGGATTAGGCCCTATGGTTGCTCTGTTCAAGTATTCCCCTGTCACGACTTATACTGTTTCTGTGCCTCCTCTGAAGCTTCCATTCAGCAGTTCAATTAGACAAGACTGGCTTATGAAAGAAACTCAGAATGTGTACATGAAATTGATTTACTTGTTCACAGAGGTTGCAAACTCTTTAGAGAAGATGAGATCTCAGTTTGATGGGTTGACCTTGAAACTTCGAGGCTCATTTAAAGAATTCTCTGACATCGAAGAGATGCTAAAGCAAGAAAAATCTGAGTTCGAGGTAGTGCTCAAGAATGCTGTTACCAAGACTGAGAACTCGGACCAGGCTGCCTACAAACTACTTAGCTTGAACAGAGTACTGTGGGAACTGCTCCTTGAAGCATGCATTTGGGAACGGCGCTTGCATTCATTACTGTCACTAGATCCTATGATCGATCCATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000285 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005942 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006810 GO:0008150 GO:0008152 GO:0008289 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016192 GO:0016197 GO:0016301 GO:0016307 GO:0016310 GO:0016482 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0019898 GO:0030258 GO:0031090 GO:0031410 GO:0031982 GO:0032266 GO:0032991 GO:0035032 GO:0035091 GO:0042147 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061695 GO:0070772 GO:0071704 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:1901981 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00562 ko04070 ko04145 ko04810 map00562 map04070 map04145 map04810

Pfam Domains

Protein Families

Cpn60_TCP1 PIP5K

Protein Analysis

969

Amino Acids

107.38

Weight (kDa)

5.53

Isoelectric Point (pI)

45.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005132)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34260 AT1G34260 AT1G34260 AT1G34260
fragaria_vesca	FvH4_2g12440 FvH4_2g12440 FvH4_2g12440 FvH4_2g12440 FvH4_2g12440
malus_domestica	MD00G1078100.v1.1 MD10G1044000.v1.1 MD10G1044100.v1.1
prunus_persica	Prupe.8G050600_v2.0.a1
pyrus_communis	pycom05g03120 pycom05g03130 pycom10g03060 pycom10g03070 pycom10g03080
rosa_chinensis	RchiOBHm_Chr6g0272731
rosa_laevigata	RLG00000013661
rosa_multiflora	Rmu_co8449107.1_g000001 Rmu_sc0003080.1_g000001 Rmu_sc0014453.1_g000001
rosa_roxburghii	Rroxscaffold_7G00196050
rosa_rugosa	Rorug06G0070400
rosa_samantha	Rh6AG186600 Rh6BG189900 Rh6CG188700 Rh6DG180100
rosa_wichuraiana	Rw6G016100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1685
AccB7I	CCANNNNNTGG	2 cut(s)	194, 1975
AccI	GTMKAC	2 cut(s)	263, 857
AciI	CCGC	1 cut(s)	2421
AclWI	GGATC	8 cut(s)	131, 144, 416, 743, 1129, 1483, 2879, 2891
AcoI	YGGCCR	1 cut(s)	2422
AcsI	RAATTY	7 cut(s)	367, 1193, 1595, 1693, 2074, 2365, 2693
AcuI	CTGAAG	2 cut(s)	983, 2549
AdeI	CACNNNGTG	2 cut(s)	38, 1307
AfiI	CCNNNNNNNGG	2 cut(s)	194, 1975
AhlI	ACTAGT	1 cut(s)	808
AjnI	CCWGG	5 cut(s)	1645, 2221, 2239, 2370, 2784
Alw21I	GWGCWC	4 cut(s)	86, 1303, 2379, 2751
Alw26I	GTCTC	3 cut(s)	1370, 1502, 1728
AlwI	GGATC	8 cut(s)	131, 144, 416, 743, 1129, 1483, 2879, 2891
AoxI	GGCC	3 cut(s)	1603, 2422, 2464
ApeKI	GCWGC	7 cut(s)	57, 704, 795, 839, 2194, 2418, 2789
ApoI	RAATTY	7 cut(s)	367, 1193, 1595, 1693, 2074, 2365, 2693
AseI	ATTAAT	2 cut(s)	591, 1244
AspLEI	GCGC	1 cut(s)	2862
AspS9I	GGNCC	3 cut(s)	1228, 2465, 2782
AsuHPI	GGTGA	6 cut(s)	494, 674, 1116, 1924, 2159, 2255
AsuII	TTCGAA	1 cut(s)	375
AvaII	GGWCC	2 cut(s)	1228, 2782
AxyI	CCTNAGG	1 cut(s)	1803
BamHI	GGATCC	1 cut(s)	136
BanII	GRGCYC	2 cut(s)	86, 2379
BauI	CACGAG	1 cut(s)	1029
BbsI	GAAGAC	2 cut(s)	817, 903
Bbv12I	GWGCWC	4 cut(s)	86, 1303, 2379, 2751
BbvI	GCAGC	7 cut(s)	44, 691, 807, 826, 2206, 2405, 2776
BccI	CCATC	8 cut(s)	344, 479, 749, 1002, 1098, 2096, 2401, 2651
BceAI	ACGGC	2 cut(s)	2231, 2873
BciT130I	CCWGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
BclI	TGATCA	3 cut(s)	9, 612, 1813
BcoDI	GTCTC	3 cut(s)	1370, 1502, 1728
BcuI	ACTAGT	1 cut(s)	808
BfaI	CTAG	8 cut(s)	54, 809, 1097, 2007, 2295, 2415, 2882, 2905
BfmI	CTRYAG	1 cut(s)	58
BfoI	RGCGCY	1 cut(s)	2863
BglII	AGATCT	2 cut(s)	1778, 2645
BisI	GCNGC	8 cut(s)	58, 705, 796, 840, 2195, 2419, 2422, 2790
BlsI	GCNGC	8 cut(s)	59, 706, 797, 841, 2196, 2420, 2423, 2791
BmcAI	AGTACT	2 cut(s)	900, 2820
Bme1390I	CCNGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
Bme18I	GGWCC	2 cut(s)	1228, 2782
BmgT120I	GGNCC	3 cut(s)	1228, 2465, 2782
BmiI	GGNNCC	4 cut(s)	138, 405, 1230, 2219
BmrFI	CCNGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
BmrI	ACTGGG	2 cut(s)	1533, 1542
BmsI	GCATC	8 cut(s)	653, 715, 786, 1609, 1631, 1676, 1715, 2703
BmuI	ACTGGG	2 cut(s)	1533, 1542
BpiI	GAAGAC	2 cut(s)	817, 903
BplI	GAGNNNNNCTC	2 cut(s)	1093, 1125
BpmI	CTGGAG	3 cut(s)	1233, 2244, 2393
Bpu10I	CCTNAGC	1 cut(s)	233
Bpu14I	TTCGAA	1 cut(s)	375
BpuEI	CTTGAG	5 cut(s)	114, 157, 1686, 1928, 2735
Bsa29I	ATCGAT	2 cut(s)	747, 2895
BsaAI	YACGTR	1 cut(s)	763
BsaBI	GATNNNNATC	1 cut(s)	925
BsaJI	CCNNGG	5 cut(s)	633, 875, 1273, 1590, 2221
BsaXI	ACNNNNNCTCC	4 cut(s)	1212, 1242, 2263, 2293
Bsc4I	CCNNNNNNNGG	2 cut(s)	194, 1975
Bse1I	ACTGG	8 cut(s)	188, 340, 790, 1123, 1528, 1548, 2131, 2567
Bse21I	CCTNAGG	1 cut(s)	1803
Bse3DI	GCAATG	2 cut(s)	582, 1410
Bse8I	GATNNNNATC	1 cut(s)	925
BseBI	CCWGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
BseCI	ATCGAT	2 cut(s)	747, 2895
BseDI	CCNNGG	5 cut(s)	633, 875, 1273, 1590, 2221
BseGI	GGATG	6 cut(s)	184, 436, 926, 994, 1577, 2271
BseJI	GATNNNNATC	1 cut(s)	925
BseLI	CCNNNNNNNGG	2 cut(s)	194, 1975
BseMI	GCAATG	2 cut(s)	582, 1410
BseNI	ACTGG	8 cut(s)	188, 340, 790, 1123, 1528, 1548, 2131, 2567
BseRI	GAGGAG	1 cut(s)	2514
BseXI	GCAGC	7 cut(s)	44, 691, 807, 826, 2206, 2405, 2776
BsgI	GTGCAG	4 cut(s)	825, 1358, 1365, 2328
BshFI	GGCC	3 cut(s)	1605, 2424, 2466
BshVI	ATCGAT	2 cut(s)	747, 2895
BsiHKAI	GWGCWC	4 cut(s)	86, 1303, 2379, 2751
BslFI	GGGAC	1 cut(s)	1214
BslI	CCNNNNNNNGG	2 cut(s)	194, 1975
BsmAI	GTCTC	3 cut(s)	1370, 1502, 1728
BsmFI	GGGAC	1 cut(s)	1214
BsmI	GAATGC	2 cut(s)	2761, 2866
BsnI	GGCC	3 cut(s)	1605, 2424, 2466
Bsp119I	TTCGAA	1 cut(s)	375
Bsp1286I	GDGCHC	4 cut(s)	86, 1303, 2379, 2751
Bsp1407I	TGTACA	4 cut(s)	1793, 2135, 2315, 2589
BspACI	CCGC	1 cut(s)	2421
BspANI	GGCC	3 cut(s)	1605, 2424, 2466
BspDI	ATCGAT	2 cut(s)	747, 2895
BspHI	TCATGA	1 cut(s)	1372
BspLI	GGNNCC	4 cut(s)	138, 405, 1230, 2219
BspMAI	CTGCAG	1 cut(s)	62
BspPI	GGATC	8 cut(s)	131, 144, 416, 743, 1129, 1483, 2879, 2891
BspT104I	TTCGAA	1 cut(s)	375
BsrDI	GCAATG	2 cut(s)	582, 1410
BsrGI	TGTACA	4 cut(s)	1793, 2135, 2315, 2589
BsrI	ACTGG	8 cut(s)	188, 340, 790, 1123, 1528, 1548, 2131, 2567
BssECI	CCNNGG	5 cut(s)	633, 875, 1273, 1590, 2221
BssNAI	GTATAC	1 cut(s)	264
BssSI	CACGAG	1 cut(s)	1029
BssT1I	CCWWGG	3 cut(s)	875, 1273, 1590
Bst1107I	GTATAC	1 cut(s)	264
Bst2BI	CACGAG	1 cut(s)	1029
Bst2UI	CCWGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
Bst4CI	ACNGT	9 cut(s)	44, 268, 990, 1024, 1537, 2032, 2512, 2823, 2877
Bst6I	CTCTTC	4 cut(s)	465, 1747, 1845, 2703
BstAUI	TGTACA	4 cut(s)	1793, 2135, 2315, 2589
BstBAI	YACGTR	1 cut(s)	763
BstBI	TTCGAA	1 cut(s)	375
BstC8I	GCNNGC	3 cut(s)	837, 2845, 2864
BstDSI	CCRYGG	1 cut(s)	633
BstF5I	GGATG	6 cut(s)	184, 436, 926, 994, 1577, 2271
BstH2I	RGCGCY	1 cut(s)	2863
BstHHI	GCGC	1 cut(s)	2862
BstMAI	GTCTC	3 cut(s)	1370, 1502, 1728
BstMWI	GCNNNNNNNGC	2 cut(s)	581, 1867
BstNI	CCWGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
BstNSI	RCATGY	4 cut(s)	839, 1211, 1893, 2847
BstSCI	CCNGG	5 cut(s)	1645, 2221, 2239, 2370, 2784
BstSFI	CTRYAG	1 cut(s)	58
BstV1I	GCAGC	7 cut(s)	44, 691, 807, 826, 2206, 2405, 2776
BstV2I	GAAGAC	2 cut(s)	817, 903
BstX2I	RGATCY	5 cut(s)	136, 1475, 1778, 2645, 2884
BstYI	RGATCY	5 cut(s)	136, 1475, 1778, 2645, 2884
BstZ17I	GTATAC	1 cut(s)	264
Bsu15I	ATCGAT	2 cut(s)	747, 2895
Bsu36I	CCTNAGG	1 cut(s)	1803
BsuRI	GGCC	3 cut(s)	1605, 2424, 2466
BsuTUI	ATCGAT	2 cut(s)	747, 2895
BtgI	CCRYGG	1 cut(s)	633
BtgZI	GCGATG	3 cut(s)	312, 763, 1076
BtsCI	GGATG	6 cut(s)	184, 436, 926, 994, 1577, 2271
BtsI	GCAGTG	4 cut(s)	43, 67, 591, 1346
Cac8I	GCNNGC	3 cut(s)	837, 2845, 2864
CciI	TCATGA	1 cut(s)	1372
CfoI	GCGC	1 cut(s)	2862
Cfr13I	GGNCC	3 cut(s)	1228, 2465, 2782
ClaI	ATCGAT	2 cut(s)	747, 2895
DraI	TTTAAA	5 cut(s)	556, 604, 717, 1198, 2689
DraIII	CACNNNGTG	2 cut(s)	38, 1307
EaeI	YGGCCR	1 cut(s)	2422
Eam1104I	CTCTTC	4 cut(s)	465, 1747, 1845, 2703
EarI	CTCTTC	4 cut(s)	465, 1747, 1845, 2703
Ecl136II	GAGCTC	2 cut(s)	84, 2377
Eco130I	CCWWGG	3 cut(s)	875, 1273, 1590
Eco24I	GRGCYC	2 cut(s)	86, 2379
Eco32I	GATATC	1 cut(s)	2083
Eco47I	GGWCC	2 cut(s)	1228, 2782
Eco53kI	GAGCTC	2 cut(s)	84, 2377
Eco57I	CTGAAG	2 cut(s)	983, 2549
Eco81I	CCTNAGG	1 cut(s)	1803
EcoICRI	GAGCTC	2 cut(s)	84, 2377
EcoO109I	RGGNCCY	2 cut(s)	1228, 2465
EcoRI	GAATTC	1 cut(s)	2693
EcoRII	CCWGG	5 cut(s)	1645, 2221, 2239, 2370, 2784
EcoRV	GATATC	1 cut(s)	2083
EcoT14I	CCWWGG	3 cut(s)	875, 1273, 1590
EcoT22I	ATGCAT	3 cut(s)	779, 1624, 2849
EcoT38I	GRGCYC	2 cut(s)	86, 2379
ErhI	CCWWGG	3 cut(s)	875, 1273, 1590
FalI	AAGNNNNNCTT	8 cut(s)	1449, 1481, 1890, 1922, 2244, 2276, 2550, 2582
FaqI	GGGAC	1 cut(s)	1214
FauNDI	CATATG	1 cut(s)	852
FbaI	TGATCA	3 cut(s)	9, 612, 1813
FblI	GTMKAC	2 cut(s)	263, 857
Fnu4HI	GCNGC	8 cut(s)	58, 705, 796, 840, 2195, 2419, 2422, 2790
FokI	GGATG	6 cut(s)	171, 443, 913, 981, 1584, 2278
FriOI	GRGCYC	2 cut(s)	86, 2379
Fsp4HI	GCNGC	8 cut(s)	58, 705, 796, 840, 2195, 2419, 2422, 2790
FspBI	CTAG	8 cut(s)	54, 809, 1097, 2007, 2295, 2415, 2882, 2905
GlaI	GCGC	1 cut(s)	2861
GluI	GCNGC	8 cut(s)	58, 705, 796, 840, 2195, 2419, 2422, 2790
GsuI	CTGGAG	3 cut(s)	1233, 2244, 2393
HaeII	RGCGCY	1 cut(s)	2863
HaeIII	GGCC	3 cut(s)	1605, 2424, 2466
HhaI	GCGC	1 cut(s)	2862
Hin6I	GCGC	1 cut(s)	2860
HinP1I	GCGC	1 cut(s)	2860
HincII	GTYRAC	5 cut(s)	806, 858, 1078, 1393, 2664
HindII	GTYRAC	5 cut(s)	806, 858, 1078, 1393, 2664
HindIII	AAGCTT	2 cut(s)	1899, 2531
HinfI	GANTC	9 cut(s)	517, 935, 1043, 1175, 1583, 1743, 1979, 2272, 2304
HphI	GGTGA	6 cut(s)	494, 674, 1116, 1924, 2159, 2255
Hpy99I	CGWCG	1 cut(s)	470
HpyAV	CCTTC	6 cut(s)	527, 1315, 1562, 1595, 2246, 2431
HpyCH4III	ACNGT	9 cut(s)	44, 268, 990, 1024, 1537, 2032, 2512, 2823, 2877
HpyCH4IV	ACGT	2 cut(s)	762, 2347
HpyF10VI	GCNNNNNNNGC	2 cut(s)	581, 1867
HpySE526I	ACGT	2 cut(s)	762, 2347
HspAI	GCGC	1 cut(s)	2860
Ksp22I	TGATCA	3 cut(s)	9, 612, 1813
LmnI	GCTCC	5 cut(s)	1092, 1298, 2223, 2374, 2838
Lsp1109I	GCAGC	7 cut(s)	44, 691, 807, 826, 2206, 2405, 2776
LweI	GCATC	8 cut(s)	653, 715, 786, 1609, 1631, 1676, 1715, 2703
MaeI	CTAG	8 cut(s)	54, 809, 1097, 2007, 2295, 2415, 2882, 2905
MaeII	ACGT	2 cut(s)	762, 2347
MaeIII	GTNAC	6 cut(s)	30, 38, 2186, 2497, 2761, 2877
MflI	RGATCY	5 cut(s)	136, 1475, 1778, 2645, 2884
MhlI	GDGCHC	4 cut(s)	86, 1303, 2379, 2751
MlyI	GAGTC	4 cut(s)	526, 1052, 1169, 2281
MmeI	TCCRAC	1 cut(s)	1956
Mph1103I	ATGCAT	3 cut(s)	779, 1624, 2849
MslI	CAYNNNNRTG	4 cut(s)	977, 999, 1821, 1888
MspR9I	CCNGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
Mva1269I	GAATGC	2 cut(s)	2761, 2866
MvaI	CCWGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
MwoI	GCNNNNNNNGC	2 cut(s)	581, 1867
NdeI	CATATG	1 cut(s)	852
NlaIV	GGNNCC	4 cut(s)	138, 405, 1230, 2219
NmuCI	GTSAC	4 cut(s)	30, 38, 2497, 2877
NsiI	ATGCAT	3 cut(s)	779, 1624, 2849
NspI	RCATGY	4 cut(s)	839, 1211, 1893, 2847
NspV	TTCGAA	1 cut(s)	375
PaeI	GCATGC	2 cut(s)	839, 2847
PagI	TCATGA	1 cut(s)	1372
PctI	GAATGC	2 cut(s)	2761, 2866
PfeI	GAWTC	5 cut(s)	935, 1583, 1743, 1979, 2304
PflMI	CCANNNNNTGG	2 cut(s)	194, 1975
PfoI	TCCNGGA	1 cut(s)	2370
PkrI	GCNGC	8 cut(s)	59, 706, 797, 841, 2196, 2420, 2423, 2791
PleI	GAGTC	4 cut(s)	525, 1051, 1169, 2280
PpsI	GAGTC	4 cut(s)	525, 1051, 1169, 2280
Ppu21I	YACGTR	1 cut(s)	763
PpuMI	RGGWCCY	1 cut(s)	1228
PshBI	ATTAAT	2 cut(s)	591, 1244
PsiI	TTATAA	1 cut(s)	1685
Psp124BI	GAGCTC	2 cut(s)	86, 2379
Psp5II	RGGWCCY	1 cut(s)	1228
Psp6I	CCWGG	5 cut(s)	1645, 2221, 2239, 2370, 2784
PspGI	CCWGG	5 cut(s)	1645, 2221, 2239, 2370, 2784
PspN4I	GGNNCC	4 cut(s)	138, 405, 1230, 2219
PspPI	GGNCC	3 cut(s)	1228, 2465, 2782
PspPPI	RGGWCCY	1 cut(s)	1228
PsrI	GAACNNNNNNTAC	4 cut(s)	261, 293, 493, 525
PstI	CTGCAG	1 cut(s)	62
PsuI	RGATCY	5 cut(s)	136, 1475, 1778, 2645, 2884
RseI	CAYNNNNRTG	4 cut(s)	977, 999, 1821, 1888
SacI	GAGCTC	2 cut(s)	86, 2379
SalI	GTCGAC	1 cut(s)	856
SatI	GCNGC	8 cut(s)	58, 705, 796, 840, 2195, 2419, 2422, 2790
Sau96I	GGNCC	3 cut(s)	1228, 2465, 2782
ScaI	AGTACT	2 cut(s)	900, 2820
SchI	GAGTC	4 cut(s)	526, 1052, 1169, 2281
ScrFI	CCNGG	5 cut(s)	1647, 2223, 2241, 2372, 2786
SduI	GDGCHC	4 cut(s)	86, 1303, 2379, 2751
SfaNI	GCATC	8 cut(s)	653, 715, 786, 1609, 1631, 1676, 1715, 2703
SfcI	CTRYAG	1 cut(s)	58
SfuI	TTCGAA	1 cut(s)	375
SinI	GGWCC	2 cut(s)	1228, 2782
SmiMI	CAYNNNNRTG	4 cut(s)	977, 999, 1821, 1888
SmlI	CTYRAG	5 cut(s)	129, 172, 1701, 1907, 2750
SmoI	CTYRAG	5 cut(s)	129, 172, 1701, 1907, 2750
SpeI	ACTAGT	1 cut(s)	808
SphI	GCATGC	2 cut(s)	839, 2847
SsiI	CCGC	1 cut(s)	2421
SspMI	CTAG	8 cut(s)	54, 809, 1097, 2007, 2295, 2415, 2882, 2905
SstI	GAGCTC	2 cut(s)	86, 2379
StyD4I	CCNGG	5 cut(s)	1645, 2221, 2239, 2370, 2784
StyI	CCWWGG	3 cut(s)	875, 1273, 1590
TaaI	ACNGT	9 cut(s)	44, 268, 990, 1024, 1537, 2032, 2512, 2823, 2877
TaiI	ACGT	2 cut(s)	765, 2350
TatI	WGTACW	9 cut(s)	864, 898, 1115, 1639, 1793, 2135, 2315, 2589, 2818
TauI	GCSGC	1 cut(s)	2424
TfiI	GAWTC	5 cut(s)	935, 1583, 1743, 1979, 2304
TseFI	GTSAC	4 cut(s)	30, 38, 2497, 2877
TseI	GCWGC	7 cut(s)	57, 704, 795, 839, 2194, 2418, 2789
Tsp45I	GTSAC	4 cut(s)	30, 38, 2497, 2877
TspGWI	ACGGA	1 cut(s)	622
Van91I	CCANNNNNTGG	2 cut(s)	194, 1975
VpaK11BI	GGWCC	2 cut(s)	1228, 2782
VspI	ATTAAT	2 cut(s)	591, 1244
XapI	RAATTY	7 cut(s)	367, 1193, 1595, 1693, 2074, 2365, 2693
XceI	RCATGY	4 cut(s)	839, 1211, 1893, 2847
XmiI	GTMKAC	2 cut(s)	263, 857
XspI	CTAG	8 cut(s)	54, 809, 1097, 2007, 2295, 2415, 2882, 2905
ZrmI	AGTACT	2 cut(s)	900, 2820
Zsp2I	ATGCAT	3 cut(s)	779, 1624, 2849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.