Rh6DG180100
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase FAB1D

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
31745189 .. 31754766
9578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG180100.1

Sequence Viewer

Length: 4014 bp
ATGATCGGCACGAATAATGACCAGCTATGGGAACCCCCTTCTGCAAACACTTGTGGATCATCTAGCGAAACTGAGAATTCAAATTCTTCAGAAGGTGAAATGGCCGACTGGATATGGGATCCTCCTGAACCTGATGATCCAGAGGACGATGTGGAGGGTAGTGTGGCTTTCAATGACGACGATGATGATGAGTGTGGTGATGGCATGAAATGGGGCAAACCAAGTTCTTTGAGTCGCTCTAAAGATGAAGGAAGTGGGAGCTATAAGTTTAAAGAGGAAAAACAAAGAGCAATGGAAGCAGTTATTAATGGAAAGTTCAAGGCTCTTGTCAGTCAACTACTTACATCTGTTGGTGTTGTTGGATCTTCTGGGGAGGATGGTGAAAGTTGGGTGGACATTATTACTTCTTTGTCATGGGAAGCTGCTTCATTTTTGAAACCTGATGCTGTTGTTGGTAAAGCAATGGATATAGATGGCTATATGAAAGTAAAATGCATTGCAACTGGTGATCGCTGCCAAAGTCAATTAGTAAAAGGTATGGTCTTCAAAAAGCATGCTGCACACAAGCATATGCCAATCAAGTACAAGAACCCAAGGTTGTTGCTAATCCAGGGAGTTCTTGGTCAGTCTTCAAGTGGATTGTCATCATTTGATTCCATGGAGCAGGAACAAGATTACTTGAAGTATGTCACCGAAATGCTAGAACTGTGTCATCCAAATGTGGTTTTAGTGGAAAAAACTGTGTCTCGGGATATTCAAGAGTCTATTCTCGCAAAAAGAATGACACTGGTCTATGACATGAAGCCCCATCGTCTACAGAGAATTGCTCTTTGTACTGGATCACCAATTTTATCATCAGATACAATGACGAGTCAAAAGCTAAAGCAGTGCGACTCTTTTCACATTGAAAAATTTATAGAGGAACGTGCTGGTTTGGGTGGAGGAAAGATGCCAAGTAAAACATTGATGTTTATTGAGGGCTGTCCTACACGCCAGGGTTGTACAATTTTGCTGAAAGGAGCACAGAGTGATGAATTGAAGAAGATCAAGTGTGTAGTGCAGTGTGCAGTTATCTTGGCATATCATTTAATACTTGAGACTTCTTTCCTTGTTGACCAGAGAGCAATGTTCTTTGCGCATCCTTTGTTTGGTGGAGCAAATCACTTGTCCAAGGAAGTAGCAAACCAGTTTTCCACTGGTAACAAATCCTTTAATTTAGCATCTAGTAATTCATGCATTCCACATCATAGGGAGTCTAGTGGTGAAACTGAGTCGGATGCAGTTGATATTCTCATTTCTGATGGATTCCATGAAGGATCTTCCCAAAATGCTGACTTGGAATTACAAGGCAGTTCCACATTATATGAACCATACAAACCTGTCATATTTTCTGGCTTCTCGTCACTTTCAGCTTCACTAAAGAAAGTTATAGGGGAAAGCTTGCCTCTAGCATCTACTTCTTATCAATCTCTCTCTTCATACTTTGGATTAAATGGAAGAGAACTGAATGGTCAGATTACAAAGTCTGTTTCTATTTCAACATCTCCAGAGGCGACTGATCAGTGTGATGTTGAAGATAGAGGAAGTTCTGATGAAGAGAGGCCACGTAGTGGTGGAGAAATCCAGTCTCCATTTACTTGCACTGAAGCTTCTCTGGAGATTGAAAAGGATGGTGGCAACAATGAAGACCCAATGCAGAGCAAGAATGACATCAGCAAAGTGTTGGATTCCCAGAGTATTTTGGTTTTGATGTCGAGCAAGAATGTTAAAGGGAATGTTTGTGAGCAAAGCCATTTTTCTCATATCATGTTCTACAAGAATTTTGATGTGCCAATCGGAAAGTTTCTACAGGATAATATACTGAATCAGAGAAGCCATTGCACAGCATGTGGTGAGCTGCCAGAAGCTCACGTATACTGTTATGCACATCATAACAAGCAGCTTACCATACGCGTTAAACGGCTTCGTACAGGGCATTTGCCTGGTGAAGCAGAAGGCAAGCTTTGGATGTGGAGTCGATGCGGTAAATGTAAATCTGTGAAGGGAAAATCAAAGTGTACAAAAAGAGTCTTGATTTCCAGTGCTGCACGTTGTCTTTCATTTGGAAATTTCCTGGAGCTCAGTTTCTCAAATCACTCTCTGTCTAATATATTTTCTAGCTGCGGCCATTCTTTGCAAATGGACTTTCTCTACTTCTTTGGATTAGGCCCCATGGTTGCTATGTTCAAAAACTCCCCGGTCACAATTTATACTGTGTCTGTGCCTCCTCTAAAACTTCCATTCAGCAATTCAATTAGGCAAGAGTGGTTTGCAAAAGAAATTGAGAATGTATTAGCGAAAGGACGTATGCTGTTAAGTGAGGTTGGCAATTCTTTGAAGAATATTAGGTCTCAGTTTGATGGCATGACTTTGAAACTGCAAGGCTCCTTGAAAAGATTCTCTGACATCGAAGATATGCTAAGTCAAGAAGAATCTGAGCGAGAGGTAAACATCCGTAATGCTGTTAACGAGAATAGGAACTCAGACCAAGCCGCTTACAAACTTCTTGGCTTTAACCGTGTACATTGGGAACTTCTTCTTCAATCATGCGTTTGGGATCAGCGCTTGCACTCGTTACTGTCACCAACTCCTATGATGATCCATTCCATAGCTTCTGATAAGGTAAGCCAAGAAGTGAATTCAGGTATTCATGGCACTGCTGACAGTATTATGGGAAGAGGTGAAAACTGCATTGATGGTTCTTCCAATTTAAAAGTTGAGTTAAATATAGCTGCAAAAGCAGATGAATTTCCAATTAAAGAAATTCCAATTGGTGGTCCTGTTGAAGAATCTGAAGGAGCTGATCAACATAACGAGTCTACTTTGCCTGAGGGTCTTAAGACACCAAATGTGGGTGGTGCAAGGCCAAAAAGATTTGCTGACCACAAGTCCAATCCTAGGCCCAATGGCTCCACTGATGGTCATTCTGACAAGTATGTTGAAGGGAATATTACTTTCGCTGATGAACTAGATGAAGATAGAGGAATTCCTGTTTCCAGGGAAAATGAGGATCCTTGTTCAGTTGATTCAAATCTATCACTGATGGGTGCTTCTCCGCACTCACGATCATCCAAGTTTGACAGTTCAAGTGATTGGTTTTGGGCGCCCTTCTCTGAAATTCGACAAGTAGGTATGAAGGATCTACAAAGAGTCCTTCCAAGGTTTGGACCCATGAGTAGCTATACATCAGAATACTTACCCACAGCATATCAGTTGATCACAGAGGAAGGGCAAATGTTGCACGTTCCTCTAGGAACTGATAATTATATAGTGTCGGACTATGATGGTGAACTTTCAAGTGTGATTGCTTGTGCACTGGCCTTTTTGAAAGATCCACATCTTCAAACAGATGTTCTTGTTGATGACGAGTGTGGAATTGCTGCTAGAACATTTGAGAGTTTACAGAGTCTGGCTCGGGTTCCTTCTCCGCATCAAAGCTCAAATGGTTCTTCAGATTCTGATTCAGTCCATTCTATGGCAAGCATTTCTTTTGATGAGTCACGCTTCTCCAGTTTTGACGGATTGAACTTGTTGGATTCTCTGGTTCCGGTAGGAACCCACCCAATGGTAACTCTAAGAGTTGCCAAGTCACTTGGCAAGGAGAAATATACTGTATTATGTCCATATGCCAATCAGTTTCGAGACCTCCGGAATCATTGCTGCCAATCTGAGGTTGATTATATTGCTTCCCTAAGCCGTTGTAGAAACTGGGATGCTAAAGGTGGGAAGAGCAAAGCCTTTTTTGCCAAAACAGTTGATGACAGGTTGATTATAAAAGAAATCAAGAAGACAGAATTTGAGTCATTTGTAAAGTTTGCAGATGCTTATTTTGAGCACGTGAACAAGTCATTTGAGAAGGGAAATCAAACTTGCCTTGCAAAAATTCTTGGGATTTATCAGGTTGGTAGATTTTTGGTTTCCATCATTGAACCTGTTTCTTCATACTCACAACTTTTTCTTTGCAGGTGGTTGTGA

Protein Analysis

1337

Amino Acids

147.9

Weight (kDa)

5.51

Isoelectric Point (pI)

49.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 126 - 365 1.7e-20 TCP-1/cpn60 chaperonin family
PIP5K PF01504 1253 - 1314 7.1e-10 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3812
AarI CACCTGC 1 cut(s) 3993
Acc16I TGCGCA 1 cut(s) 1137
Acc36I ACCTGC 1 cut(s) 3993
AccB1I GGYRCC 1 cut(s) 3142
AccB7I CCANNNNNTGG 5 cut(s) 1610, 2813, 3203, 3514, 3604
AccI GTMKAC 3 cut(s) 814, 1914, 2858
AccII CGCG 1 cut(s) 1953
AccIII TCCGGA 1 cut(s) 3687
AciI CCGC 5 cut(s) 2022, 2163, 2532, 3095, 3467
AcoI YGGCCR 2 cut(s) 102, 2164
AcuI CTGAAG 4 cut(s) 72, 1665, 2853, 3474
AcvI CACGTG 1 cut(s) 3877
AcyI GRCGYC 1 cut(s) 3143
AdeI CACNNNGTG 2 cut(s) 1028, 1610
AfaI GTAC 6 cut(s) 584, 835, 1003, 1969, 2059, 2562
AfeI AGCGCT 1 cut(s) 2603
AflII CTTAAG 1 cut(s) 2876
AflIII ACRYGT 1 cut(s) 1951
AhdI GACNNNNNGTC 1 cut(s) 2926
AjnI CCWGG 5 cut(s) 609, 993, 1981, 2112, 3035
AjuI GAANNNNNNNTTGG 2 cut(s) 2793, 2825
Alw21I GWGCWC 4 cut(s) 1024, 2121, 3355, 3876
Alw26I GTCTC 5 cut(s) 750, 1091, 1632, 2394, 3675
Alw44I GTGCAC 1 cut(s) 3351
AlwNI CAGNNNCTG 2 cut(s) 3448, 3497
Ama87I CYCGRG 2 cut(s) 747, 3453
Aor13HI TCCGGA 1 cut(s) 3687
Aor51HI AGCGCT 1 cut(s) 2603
AoxI GGCC 7 cut(s) 102, 1601, 2164, 2206, 2903, 2939, 3357
ApaLI GTGCAC 1 cut(s) 3351
ArsI GACNNNNNNTTYG 2 cut(s) 1151, 1183
AseI ATTAAT 1 cut(s) 306
Asp700I GAANNNNTTC 2 cut(s) 2435, 2574
AspA2I CCTAGG 1 cut(s) 2936
AspLEI GCGC 3 cut(s) 1138, 2604, 3145
AspS9I GGNCC 4 cut(s) 2207, 2816, 2940, 3206
AsuC2I CCSGG 1 cut(s) 2237
AvaI CYCGRG 2 cut(s) 747, 3453
AvaII GGWCC 2 cut(s) 2816, 3206
AvrII CCTAGG 1 cut(s) 2936
AxyI CCTNAGG 1 cut(s) 2868
BaeGI GKGCMC 1 cut(s) 3355
BamHI GGATCC 2 cut(s) 118, 3049
BanI GGYRCC 1 cut(s) 3142
BanII GRGCYC 1 cut(s) 2121
BbrPI CACGTG 1 cut(s) 3877
BbsI GAAGAC 4 cut(s) 535, 621, 1692, 3833
Bbv12I GWGCWC 4 cut(s) 1024, 2121, 3355, 3876
BceAI ACGGC 2 cut(s) 1976, 3720
BciT130I CCWGG 5 cut(s) 611, 995, 1983, 2114, 3037
BclI TGATCA 3 cut(s) 1558, 2842, 3255
BcnI CCSGG 1 cut(s) 2237
BcoDI GTCTC 5 cut(s) 750, 1091, 1632, 2394, 3675
BfmI CTRYAG 2 cut(s) 815, 1847
BfoI RGCGCY 2 cut(s) 2605, 3146
BfrI CTTAAG 1 cut(s) 2876
BfuAI ACCTGC 1 cut(s) 3993
BlnI CCTAGG 1 cut(s) 2936
Bme1390I CCNGG 6 cut(s) 611, 995, 1983, 2114, 2237, 3037
Bme18I GGWCC 2 cut(s) 2816, 3206
BmeRI GACNNNNNGTC 1 cut(s) 2926
BmeT110I CYCGRG 2 cut(s) 747, 3453
BmgT120I GGNCC 4 cut(s) 2207, 2816, 2940, 3206
BmrFI CCNGG 6 cut(s) 611, 995, 1983, 2114, 2237, 3037
BmrI ACTGGG 1 cut(s) 3757
BmuI ACTGGG 1 cut(s) 3757
BoxI GACNNNNGTC 1 cut(s) 788
BpiI GAAGAC 4 cut(s) 535, 621, 1692, 3833
BplI GAGNNNNNCTC 4 cut(s) 811, 843, 3436, 3468
BpmI CTGGAG 4 cut(s) 1530, 1676, 2135, 3532
Bpu10I CCTNAGC 1 cut(s) 3731
BpuEI CTTGAG 1 cut(s) 1115
BpuMI CCSGG 1 cut(s) 2237
BsaAI YACGTR 3 cut(s) 1607, 1912, 3877
BsaBI GATNNNNATC 3 cut(s) 643, 3069, 3375
BsaHI GRCGYC 1 cut(s) 3143
BsaI GGTCTC 2 cut(s) 2394, 3675
BsaWI WCCGGW 2 cut(s) 3586, 3687
Bse21I CCTNAGG 1 cut(s) 2868
Bse3DI GCAATG 6 cut(s) 297, 468, 495, 1131, 1876, 3694
Bse8I GATNNNNATC 3 cut(s) 643, 3069, 3375
BseAI TCCGGA 1 cut(s) 3687
BseBI CCWGG 5 cut(s) 611, 995, 1983, 2114, 3037
BseGI GGATG 9 cut(s) 382, 712, 1138, 1282, 1675, 2013, 2490, 3107, 3757
BseJI GATNNNNATC 3 cut(s) 643, 3069, 3375
BseMI GCAATG 6 cut(s) 297, 468, 495, 1131, 1876, 3694
BseMII CTCAG 8 cut(s) 63, 1260, 2134, 2405, 2466, 2535, 2859, 3699
BseRI GAGGAG 1 cut(s) 2256
BseSI GKGCMC 1 cut(s) 3355
BsgI GTGCAG 4 cut(s) 543, 1079, 1086, 2070
Bsh1236I CGCG 1 cut(s) 1953
BshFI GGCC 7 cut(s) 104, 1603, 2166, 2208, 2905, 2941, 3359
BshNI GGYRCC 1 cut(s) 3142
BsiHKAI GWGCWC 4 cut(s) 1024, 2121, 3355, 3876
BsiHKCI CYCGRG 2 cut(s) 747, 3453
BsiSI CCGG 3 cut(s) 2237, 3587, 3688
BsmAI GTCTC 5 cut(s) 750, 1091, 1632, 2394, 3675
BsmI GAATGC 1 cut(s) 1236
BsnI GGCC 7 cut(s) 104, 1603, 2166, 2208, 2905, 2941, 3359
Bso31I GGTCTC 2 cut(s) 2394, 3675
BsoBI CYCGRG 2 cut(s) 747, 3453
Bsp1286I GDGCHC 4 cut(s) 1024, 2121, 3355, 3876
Bsp13I TCCGGA 1 cut(s) 3687
Bsp1407I TGTACA 3 cut(s) 1001, 2057, 2560
Bsp19I CCATGG 2 cut(s) 657, 2211
BspACI CCGC 5 cut(s) 2022, 2163, 2532, 3095, 3467
BspANI GGCC 7 cut(s) 104, 1603, 2166, 2208, 2905, 2941, 3359
BspCNI CTCAG 8 cut(s) 64, 1261, 2133, 2404, 2467, 2534, 2860, 3700
BspEI TCCGGA 1 cut(s) 3687
BspFNI CGCG 1 cut(s) 1953
BspMI ACCTGC 1 cut(s) 3993
BspQI GCTCTTC 1 cut(s) 3761
BspT107I GGYRCC 1 cut(s) 3142
BspTI CTTAAG 1 cut(s) 2876
BspTNI GGTCTC 2 cut(s) 2394, 3675
BsrDI GCAATG 6 cut(s) 297, 468, 495, 1131, 1876, 3694
BsrGI TGTACA 3 cut(s) 1001, 2057, 2560
BssNAI GTATAC 1 cut(s) 1915
BssNI GRCGYC 1 cut(s) 3143
BssT1I CCWWGG 6 cut(s) 593, 657, 1170, 2211, 2936, 3197
Bst1107I GTATAC 1 cut(s) 1915
Bst2UI CCWGG 5 cut(s) 611, 995, 1983, 2114, 3037
Bst6I CTCTTC 5 cut(s) 1480, 1492, 1590, 2710, 3761
BstACI GRCGYC 1 cut(s) 3143
BstAFI CTTAAG 1 cut(s) 2876
BstAPI GCANNNNNTGC 1 cut(s) 3277
BstAUI TGTACA 3 cut(s) 1001, 2057, 2560
BstBAI YACGTR 3 cut(s) 1607, 1912, 3877
BstC8I GCNNGC 5 cut(s) 555, 1442, 2000, 2606, 3520
BstDSI CCRYGG 2 cut(s) 657, 2211
BstF5I GGATG 9 cut(s) 382, 712, 1138, 1282, 1675, 2013, 2490, 3107, 3757
BstFNI CGCG 1 cut(s) 1953
BstH2I RGCGCY 2 cut(s) 2605, 3146
BstHHI GCGC 3 cut(s) 1138, 2604, 3145
BstMAI GTCTC 5 cut(s) 750, 1091, 1632, 2394, 3675
BstMWI GCNNNNNNNGC 4 cut(s) 296, 2777, 3277, 3782
BstNI CCWGG 5 cut(s) 611, 995, 1983, 2114, 3037
BstNSI RCATGY 2 cut(s) 557, 1890
BstPAI GACNNNNGTC 1 cut(s) 788
BstSCI CCNGG 6 cut(s) 609, 993, 1981, 2112, 2235, 3035
BstSFI CTRYAG 2 cut(s) 815, 1847
BstSLI GKGCMC 1 cut(s) 3355
BstUI CGCG 1 cut(s) 1953
BstV2I GAAGAC 4 cut(s) 535, 621, 1692, 3833
BstX2I RGATCY 6 cut(s) 118, 362, 1316, 3049, 3178, 3370
BstYI RGATCY 6 cut(s) 118, 362, 1316, 3049, 3178, 3370
BstZ17I GTATAC 1 cut(s) 1915
Bsu36I CCTNAGG 1 cut(s) 2868
BsuRI GGCC 7 cut(s) 104, 1603, 2166, 2208, 2905, 2941, 3359
BtgI CCRYGG 2 cut(s) 657, 2211
BtsCI GGATG 9 cut(s) 382, 712, 1138, 1282, 1675, 2013, 2490, 3107, 3757
BtsI GCAGTG 3 cut(s) 893, 1067, 2694
BveI ACCTGC 1 cut(s) 3993
Cac8I GCNNGC 5 cut(s) 555, 1442, 2000, 2606, 3520
CaiI CAGNNNCTG 2 cut(s) 3448, 3497
CfoI GCGC 3 cut(s) 1138, 2604, 3145
Cfr13I GGNCC 4 cut(s) 2207, 2816, 2940, 3206
Csp6I GTAC 6 cut(s) 583, 834, 1002, 1968, 2058, 2561
CviQI GTAC 6 cut(s) 583, 834, 1002, 1968, 2058, 2561
DinI GGCGCC 1 cut(s) 3144
DraI TTTAAA 2 cut(s) 271, 2751
DraIII CACNNNGTG 2 cut(s) 1028, 1610
DriI GACNNNNNGTC 1 cut(s) 2926
EaeI YGGCCR 2 cut(s) 102, 2164
Eam1104I CTCTTC 5 cut(s) 1480, 1492, 1590, 2710, 3761
Eam1105I GACNNNNNGTC 1 cut(s) 2926
EarI CTCTTC 5 cut(s) 1480, 1492, 1590, 2710, 3761
Ecl136II GAGCTC 1 cut(s) 2119
Eco130I CCWWGG 6 cut(s) 593, 657, 1170, 2211, 2936, 3197
Eco24I GRGCYC 1 cut(s) 2121
Eco31I GGTCTC 2 cut(s) 2394, 3675
Eco47I GGWCC 2 cut(s) 2816, 3206
Eco47III AGCGCT 1 cut(s) 2603
Eco53kI GAGCTC 1 cut(s) 2119
Eco57I CTGAAG 4 cut(s) 72, 1665, 2853, 3474
Eco72I CACGTG 1 cut(s) 3877
Eco81I CCTNAGG 1 cut(s) 2868
Eco88I CYCGRG 2 cut(s) 747, 3453
EcoICRI GAGCTC 1 cut(s) 2119
EcoO109I RGGNCCY 1 cut(s) 2207
EcoRI GAATTC 3 cut(s) 76, 2677, 3024
EcoRII CCWGG 5 cut(s) 609, 993, 1981, 2112, 3035
EcoT14I CCWWGG 6 cut(s) 593, 657, 1170, 2211, 2936, 3197
EcoT22I ATGCAT 2 cut(s) 497, 1238
EcoT38I GRGCYC 1 cut(s) 2121
EgeI GGCGCC 1 cut(s) 3144
EheI GGCGCC 1 cut(s) 3144
ErhI CCWWGG 6 cut(s) 593, 657, 1170, 2211, 2936, 3197
FalI AAGNNNNNCTT 4 cut(s) 1986, 2018, 3511, 3543
FauNDI CATATG 2 cut(s) 570, 3664
FbaI TGATCA 3 cut(s) 1558, 2842, 3255
FblI GTMKAC 3 cut(s) 814, 1914, 2858
FokI GGATG 9 cut(s) 389, 699, 1125, 1289, 1682, 2020, 2477, 3094, 3764
FriOI GRGCYC 1 cut(s) 2121
FspI TGCGCA 1 cut(s) 1137
GlaI GCGC 3 cut(s) 1137, 2603, 3144
GsuI CTGGAG 4 cut(s) 1530, 1676, 2135, 3532
HaeII RGCGCY 2 cut(s) 2605, 3146
HaeIII GGCC 7 cut(s) 104, 1603, 2166, 2208, 2905, 2941, 3359
HapII CCGG 3 cut(s) 2237, 3587, 3688
HhaI GCGC 3 cut(s) 1138, 2604, 3145
Hin1I GRCGYC 1 cut(s) 3143
Hin6I GCGC 3 cut(s) 1136, 2602, 3143
HinP1I GCGC 3 cut(s) 1136, 2602, 3143
HincII GTYRAC 3 cut(s) 335, 1114, 2506
HindII GTYRAC 3 cut(s) 335, 1114, 2506
HindIII AAGCTT 3 cut(s) 1438, 1647, 2000
HpaI GTTAAC 1 cut(s) 2506
HpaII CCGG 3 cut(s) 2237, 3587, 3688
Hpy99I CGWCG 1 cut(s) 182
HpyCH4IV ACGT 7 cut(s) 925, 1606, 1911, 2089, 2344, 3282, 3876
HpyF10VI GCNNNNNNNGC 4 cut(s) 296, 2777, 3277, 3782
HpySE526I ACGT 7 cut(s) 925, 1606, 1911, 2089, 2344, 3282, 3876
Hsp92I GRCGYC 1 cut(s) 3143
HspAI GCGC 3 cut(s) 1136, 2602, 3143
KasI GGCGCC 1 cut(s) 3142
Kpn2I TCCGGA 1 cut(s) 3687
Ksp22I TGATCA 3 cut(s) 1558, 2842, 3255
KspAI GTTAAC 1 cut(s) 2506
LguI GCTCTTC 1 cut(s) 3761
LmnI GCTCC 8 cut(s) 258, 661, 1019, 1154, 2116, 2429, 2837, 2954
MaeII ACGT 7 cut(s) 925, 1606, 1911, 2089, 2344, 3282, 3876
MaeIII GTNAC 9 cut(s) 688, 1199, 1401, 2239, 2613, 2619, 3537, 3607, 3627
MfeI CAATTG 1 cut(s) 2808
MflI RGATCY 6 cut(s) 118, 362, 1316, 3049, 3178, 3370
MhlI GDGCHC 4 cut(s) 1024, 2121, 3355, 3876
MluI ACGCGT 1 cut(s) 1951
Mly113I GGCGCC 1 cut(s) 3143
MmeI TCCRAC 5 cut(s) 340, 1254, 1704, 3294, 3552
Mph1103I ATGCAT 2 cut(s) 497, 1238
MroI TCCGGA 1 cut(s) 3687
MroXI GAANNNNTTC 2 cut(s) 2435, 2574
MslI CAYNNNNRTG 2 cut(s) 695, 717
MspCI CTTAAG 1 cut(s) 2876
MspI CCGG 3 cut(s) 2237, 3587, 3688
MspR9I CCNGG 6 cut(s) 611, 995, 1983, 2114, 2237, 3037
MunI CAATTG 1 cut(s) 2808
Mva1269I GAATGC 1 cut(s) 1236
MvaI CCWGG 5 cut(s) 611, 995, 1983, 2114, 3037
MvnI CGCG 1 cut(s) 1953
MwoI GCNNNNNNNGC 4 cut(s) 296, 2777, 3277, 3782
NarI GGCGCC 1 cut(s) 3143
NciI CCSGG 1 cut(s) 2237
NcoI CCATGG 2 cut(s) 657, 2211
NdeI CATATG 2 cut(s) 570, 3664
NmuCI GTSAC 6 cut(s) 688, 1401, 2239, 2619, 3537, 3627
NsbI TGCGCA 1 cut(s) 1137
NsiI ATGCAT 2 cut(s) 497, 1238
NspI RCATGY 2 cut(s) 557, 1890
PaeI GCATGC 1 cut(s) 557
PaqCI CACCTGC 1 cut(s) 3993
PciSI GCTCTTC 1 cut(s) 3761
PctI GAATGC 1 cut(s) 1236
PdmI GAANNNNTTC 2 cut(s) 2435, 2574
PflMI CCANNNNNTGG 5 cut(s) 1610, 2813, 3203, 3514, 3604
PfoI TCCNGGA 1 cut(s) 2112
PluTI GGCGCC 1 cut(s) 3146
PmaCI CACGTG 1 cut(s) 3877
PmlI CACGTG 1 cut(s) 3877
Ppu21I YACGTR 3 cut(s) 1607, 1912, 3877
PshAI GACNNNNGTC 1 cut(s) 788
PshBI ATTAAT 1 cut(s) 306
PsiI TTATAA 1 cut(s) 3812
Psp124BI GAGCTC 1 cut(s) 2121
Psp6I CCWGG 5 cut(s) 609, 993, 1981, 2112, 3035
PspCI CACGTG 1 cut(s) 3877
PspGI CCWGG 5 cut(s) 609, 993, 1981, 2112, 3035
PspPI GGNCC 4 cut(s) 2207, 2816, 2940, 3206
PstNI CAGNNNCTG 2 cut(s) 3448, 3497
PsuI RGATCY 6 cut(s) 118, 362, 1316, 3049, 3178, 3370
RsaI GTAC 6 cut(s) 584, 835, 1003, 1969, 2059, 2562
RsaNI GTAC 6 cut(s) 583, 834, 1002, 1968, 2058, 2561
RseI CAYNNNNRTG 2 cut(s) 695, 717
SacI GAGCTC 1 cut(s) 2121
SapI GCTCTTC 1 cut(s) 3761
Sau96I GGNCC 4 cut(s) 2207, 2816, 2940, 3206
ScrFI CCNGG 6 cut(s) 611, 995, 1983, 2114, 2237, 3037
SduI GDGCHC 4 cut(s) 1024, 2121, 3355, 3876
SfcI CTRYAG 2 cut(s) 815, 1847
SfoI GGCGCC 1 cut(s) 3144
SinI GGWCC 2 cut(s) 2816, 3206
SmiMI CAYNNNNRTG 2 cut(s) 695, 717
SmlI CTYRAG 2 cut(s) 1094, 2876
SmoI CTYRAG 2 cut(s) 1094, 2876
SphI GCATGC 1 cut(s) 557
SsiI CCGC 5 cut(s) 2022, 2163, 2532, 3095, 3467
SspDI GGCGCC 1 cut(s) 3142
SspI AATATT 2 cut(s) 2383, 2989
SstI GAGCTC 1 cut(s) 2121
StyD4I CCNGG 6 cut(s) 609, 993, 1981, 2112, 2235, 3035
StyI CCWWGG 6 cut(s) 593, 657, 1170, 2211, 2936, 3197
TaiI ACGT 7 cut(s) 928, 1609, 1914, 2092, 2347, 3285, 3879
TaqI TCGA 5 cut(s) 1754, 2017, 2448, 3160, 3679
TatI WGTACW 5 cut(s) 582, 833, 1001, 2057, 2560
TauI GCSGC 2 cut(s) 2166, 2534
TseFI GTSAC 6 cut(s) 688, 1401, 2239, 2619, 3537, 3627
Tsp45I GTSAC 6 cut(s) 688, 1401, 2239, 2619, 3537, 3627
TspGWI ACGGA 2 cut(s) 2483, 3573
Van91I CCANNNNNTGG 5 cut(s) 1610, 2813, 3203, 3514, 3604
Vha464I CTTAAG 1 cut(s) 2876
VneI GTGCAC 1 cut(s) 3351
VpaK11BI GGWCC 2 cut(s) 2816, 3206
VspI ATTAAT 1 cut(s) 306
XceI RCATGY 2 cut(s) 557, 1890
XcmI CCANNNNNNNNNTGG 2 cut(s) 617, 1193
XmaJI CCTAGG 1 cut(s) 2936
XmiI GTMKAC 3 cut(s) 814, 1914, 2858
XmnI GAANNNNTTC 2 cut(s) 2435, 2574
Zsp2I ATGCAT 2 cut(s) 497, 1238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.