Rw6G016100
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase FAB1D

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
31366993 .. 31375023
8031 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G016100.1

Sequence Viewer

Length: 4746 bp
ATGTATAGTATGTGTCAGTACTGTGGTGCAGAATTGACACAACCTAAAGATGAAAAGAAGGAACATGATAATCTGAAAACCTTACCGTCAGATAGGGCTTGCAAAGCTTGTGCAGAAAAACAGGAGCGAGGATCTATCAAGCAGGCTAATGGAATGTCAAGGCCAACGATCAGTCCAATGACTTCCTTGTCAAGCAGTGATAGTTCTGTCTCCAACTGCAGTGAATTTTCTGTTGACGTCAACTCATATGATCGTACGGCAGGCATGAATAATGACCAGCTATGGGAACCCCCTTCTAATTCAAATTCTTCAGAAGGTGAAATGGCTGACTGGATATGGGATCCTCCTGAACCTGATGATCCGGAGGACGATGTGGAGGGTAGTGTGGCTTTCAATGACGACGATGATGATGAGTGTGGTGATGGCATGAAATGGGGCAAACCAAGTTCTTTGAGTCGGTCTAAAGATGAAGGAAGTGGGAGCTATAAGTTTAAAGAGGAAAAACAAAGAGCAATGGAAGCAGTTATTAATGGAAAGTTCAAGGCTCTTGTCAGTCAACTACTTACATCTGTTGGTGTTGTTGGATCTTCTGGGGAGGATGGTGAAAGTTGGGTGGACATTATTACTTCTTTGTCATGGGAAGCTGCTTCATTTTTGAAACCCGATGCTGTTGTTGGTAAAGCAATGGATATAGATGGCTATGTGAAAGTAAAATGCATTGCAACTGGTGATCGCTGCCAAAGTCAATTAGTAAAAGGTATGGTCTTCAAAAAGCATGCTGCACACAAGCATATGCCAATCAAGTACAAGAACCCAAGGTTGTTGCTAATCCAGGGAGTTCTTGGTCAGTCTTCAAGTGGATTGTCATCATTTGATTCCATGGAGCAGGAACAAGATTACTTGAAGTATGTCACCGAAATGCTAGAACTGTGTCATCCAAATGTGGTTTTAGTGGAAAAAACTGTGTCTCGGGATATTCAAGAGTCTATTCTCGCAAAAAGAATGACACTGGTCTATGACATGAAGCTCCATCGTCTACAGAGAATTGCTCTTTGTACTGGATCACCAATTTTATCATCAGATACAATGACGAGTCAAAAGCTAAAGCAGTGCGACTCTTTTCACATTGAAAAATTTATAGAGGAACGTGCTGGTTTGGGTGGAGGAAAGATGCCAAGTAAAACATTGATGTTTATTGAGGGCTGTCCTACACGCCAGGGTTGTACAATTTTGCTGAAAGGAGCACAGAGTGATGAATTGAAGAAGATCAAGTGTGTAGTGCAGTGTGCAGTTATCTTGGCATATCATTTAATACTTGAGACTTCTTTCCTTGTTGACCAGAGAGCAATGTTCTTTGCGCATCCTTTGTTTGGTGGAGCAAATCACTTGTCCAAGGAAGTAGCAAACCAGTTTTCCACTGGTAACAAATCCTTTAATTTAGCATCCAGTAATTCATGCATTCCACATCATAGGGAGTCTAGTGGTGAAACTGAGTCGGATGCAGTTGATATTCTCATTTCTGATGGATTCCATGAAGGATCTTCCCAAAATGCTGACTTGGAATTACAAGGCAGTTCCACATTATATGAACCATACAATCCTGTCATATTTTCTGGCTTCTCGTCACTTTCAGCTTCACTAAAGAAAGTTATAGGGGAAAGCCTGCCTCTAGCATCTACTTCTTATCAATCTCTCTCTTCATACTTTGGATTAAATGGAAGAGAACTGAATGGTCAGATTACAAAGTCTGTTTCTATTTCAACATCTCCAGAGGCGACTGATCAGTGTGATATTGAAGATAGAGGGAGTTCTGATGAAGAGAGGCCACTTAGTGGTGGAGAAATCCAGTCTCCATTTACTTGCACTGAAGCTTCTCTGGAGATTGAAAAGGATGGTGGCAACAATGAAGATCCAATGCAAAGCAAGAATGACATCAGCAAAGTGTTGGATTCCCAGAGTATTTTGGTTTTGATGTCGAGCAAGAATGTTAAAGGGAATGTTTGTGAGCAAAGCCATTTTTCTCATATCATGTTCTACAAGAATTTTGATGTGCCCATTGGAAAGTTTCTACAGGATAATATACTTAATCAGAGAAGCCACTGCACAGCATGTGGTGAGCTGCCAGAAGCTCACGTATACTGTTATGCACATCATAACAAGCAGCTTACCATACGCGTTAAACGGCTTCTTACAGAGCATTTGCCTGGTGAAGCAGAAGGCAAGCTTTGGATGTGGAGTCGATGCGGTAAATGTAAATCTGTGAAGGGAAAATCAAAGTGTACAAAAAGAGTCTTGATTTCCAGTGCTGCACGTTGTCTGTCATTTGGAAATTTCCTGGAGCTCAGTTTCTCAAATCACTCTCTGTCTAATATATTTTCTAGCTGCGGCCATTCTTTGCAAATGGACTTTCTCTACTTCTTTGGATTAGGCCCCATGGTTGCTATGTTCAAAAACTCCCCGGTCACAATTTATACTGTGTCTGTGCCTCCTCTAAAACTTCCATGCAGCAATTCAATTAGGCAAGAGTGGTTTGCAAAAGAAATTGAGAATGTATTAGCGAAAGGACGTATGCTGTTAAGTGAGGTTGGCAATTCTTTGAAGAATATTAGGTCTCAGTTTGATGGCATGACTTTGAAACTGCAAGGCTCCTTGAAAAAATTCTCTGACATCGAAGATATGCTATGTCAAGAAGAATCTGAGCGAGAGGTAAACATCCGTAATGCTGTTAACGAGAATAGGAACTCAGACCAAGCCGCTTACAAACTTCTTGGCTTTAACCGTGTACATTGGGAACTTCTTCTTCAATCATGCGTTTGGGATCAGCGCTTGCACTCGTTACTGTCACCAACTCCTATGATGATCCATTCCATAGCTTCTGATAAGGTAAGCCAAGAAGTGAATTCAGGTATTCATGGCACTGCTGACAGTATTATGGGAAGGGGTGAAAACTGCATTGATGGTTCTTCCAATTTAAAAGTTGAGTTAAATAAAGCAGATGAATTTCCAATTAAAGAAATTCCAATTGGTGGTCCTGTTGAAGAATCTGAAGGAGCTGATCAACATAACGAGTCTACTTTGCCTGAGGGTCTTAAGACACCAAATGTGGGTGGTGCAAGGCCAAAAAGAGTTGCTGACCACAAGTCCAATCCTAGGCCCAATGGATCCACTGATGGTCATTCTGACAAGTATGTTGAAGGGAATATTACTTTCGCTGATGAACTAGATGAAGATAGAGGAATTCCTGTTTCCAGGGAAAATGAGGATCCTTGTTCAGTTGTTGATTCAAATCTATCACTGATGGGCGCTTCTCCGCACTCACGATCATCCAAGTTTGACAGTTCAAGTGATTGGTTTTGGGCGCCCTTCTCTGAAATTCGACACGTAGGTATGAAGGATCTACAAAGAGTCCTTCCAAGGTTTGGACCCATGAGTAGCTATACATCAGAATACTTACCCACAGCATATCAGTTGATCACAGAGGAAGGGCAAATGTTGCACATTCCTCTAGGAACTGATAATTATATAGTGTCGGACTATGATGGTGAACTTTCAAGTGTGATTGCTTGTGCACTGGCCTTTTTGAAAGATCCACATCTTCAAACAGATCTTGTTGATGACGAGTGTGGAATTGCTGCTAGAACATTTGAGAGTTTACAGAGTCTGGCTCGGGTTCCTTCGCCGCATCAAAGCTCAAATGGTTCTTCAGATTCTGATTCAGTCCATTCTATGGCAAGCATTTCTTTTGATGAGTCACGCTTCTCCAGTTTTGACGGATTGAACTTGTTGGATTCTCTGGTTCCGGCAGGAACCCACCCAATGGTAACTCTAAGAGTTGCCAAGTCACTTGGCAAGGAGAAATATACTGTATTATGTCCATATGCCAATCAGTTTCGAGACCTCCGGAATCATTGCTGCCAGTCTGAGGTTGATTATATTGCTTCCCTAAGCCGTTGTAGAAACTGGGATGCTAAAGGTGGGAAGAGCAAAGCCTTTTTTGCCAAAACAGTTGATGACAGGTTGATTATAAAAGAAATCAAGAAGACAGAATTTGAGTCATTTGTAAAGTTTGCAGATGCTTATTTTGAGCACGTGAACAAGTCATTTGAGAAGGGAAATCAAACTTGCCTTGCAAAAATTCTTGGGATTTATCAGGTGGTTGTGAGACAGACAAAAAGTGGGAAAGAGATGAAACATGATCTGATGGTTATGGAGAACCTTACCTTCGGTCGGAACTGCACCCGCCTGTACGATCTTAAAGGTGCTCTACATGACCGTTTCAATTTGGCGCCTGCTGGTGCGGGAGATGTTCTTCTGGATCAGAACTTTGTCAATGACATGAACTCATCTCCATTTTATGTCAGTAACCAAGAAAAGCAAAAATTGCAACGGGCTCTGTGGAATGACACGTCTTTTCTCAATTCGATCAATGTTATGGATTATTCATTGCTTGTCGGGATTGATACACACAGACAGGAGCTTGTATGTGGCATTATTGATTATCTGAGGCAGTATACATGGGACAAGCACCTAGAGTCATGGGTGAAGTCTTCACTTGTGCCAAAGAATGTCTTGCCGACTGTTATCTCTCCTAAAGAGTACAAGAGGAGATTCAGGAAGTTCATGTCGAAGAATATATGCAGTGTCCCAGATCACTGGTGCTCCTCAGAATCCTCTGATCCTTGTGACGAATATGCTGCTAGAAATGCTGATTCTCCCAAACAAAATCCGAAAGGAAAGGGGGGTTAA

Protein Analysis

1581

Amino Acids

175.52

Weight (kDa)

5.68

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 200 - 439 2.4e-20 TCP-1/cpn60 chaperonin family
PIP5K PF01504 1324 - 1490 6.6e-34 Phosphatidylinositol-4-phosphate 5-Kinase
PIP5K PF01504 1491 - 1543 9.8e-09 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4025
AasI GACNNNNNNGTC 1 cut(s) 187
AatII GACGTC 1 cut(s) 240
Acc16I TGCGCA 1 cut(s) 1359
AccB1I GGYRCC 2 cut(s) 3358, 4285
AccB7I CCANNNNNTGG 5 cut(s) 1832, 3026, 3419, 3727, 3817
AccI GTMKAC 4 cut(s) 1036, 2136, 3071, 4511
AccII CGCG 1 cut(s) 2175
AccIII TCCGGA 2 cut(s) 361, 3900
AciI CCGC 7 cut(s) 2244, 2385, 2754, 3311, 3680, 4240, 4298
AcoI YGGCCR 1 cut(s) 2386
AcuI CTGAAG 4 cut(s) 294, 1887, 3066, 3687
AcvI CACGTG 1 cut(s) 4090
AcyI GRCGYC 3 cut(s) 237, 3359, 4286
AdeI CACNNNGTG 2 cut(s) 1250, 1832
AfaI GTAC 9 cut(s) 20, 256, 806, 1057, 1225, 2281, 2784, 4247, 4598
AfeI AGCGCT 1 cut(s) 2825
AflII CTTAAG 1 cut(s) 3089
AflIII ACRYGT 3 cut(s) 2173, 3379, 4404
AhdI GACNNNNNGTC 1 cut(s) 3139
AjiI CACGTC 1 cut(s) 4407
AjnI CCWGG 5 cut(s) 831, 1215, 2203, 2334, 3248
AjuI GAANNNNNNNTTGG 2 cut(s) 3006, 3038
Alw21I GWGCWC 6 cut(s) 1246, 2343, 3571, 4089, 4264, 4661
Alw26I GTCTC 7 cut(s) 214, 972, 1313, 1854, 2616, 3888, 4156
Alw44I GTGCAC 1 cut(s) 3567
AlwNI CAGNNNCTG 2 cut(s) 3661, 3710
Ama87I CYCGRG 2 cut(s) 969, 3666
Aor13HI TCCGGA 2 cut(s) 361, 3900
Aor51HI AGCGCT 1 cut(s) 2825
AoxI GGCC 7 cut(s) 161, 1823, 2386, 2428, 3116, 3152, 3573
ApaLI GTGCAC 1 cut(s) 3567
ArsI GACNNNNNNTTYG 2 cut(s) 1373, 1405
AseI ATTAAT 1 cut(s) 528
Asp700I GAANNNNTTC 2 cut(s) 2657, 2796
AspA2I CCTAGG 1 cut(s) 3149
AspLEI GCGC 5 cut(s) 1360, 2826, 3305, 3361, 4288
AspS9I GGNCC 4 cut(s) 2429, 3029, 3153, 3422
AsuC2I CCSGG 1 cut(s) 2459
AvaI CYCGRG 2 cut(s) 969, 3666
AvaII GGWCC 2 cut(s) 3029, 3422
AvrII CCTAGG 1 cut(s) 3149
AxyI CCTNAGG 1 cut(s) 3081
BaeGI GKGCMC 2 cut(s) 2055, 3571
BamHI GGATCC 3 cut(s) 340, 3161, 3262
BanI GGYRCC 2 cut(s) 3358, 4285
BanII GRGCYC 2 cut(s) 2343, 4393
BbrPI CACGTG 1 cut(s) 4090
BbsI GAAGAC 4 cut(s) 757, 843, 4046, 4539
Bbv12I GWGCWC 6 cut(s) 1246, 2343, 3571, 4089, 4264, 4661
BceAI ACGGC 3 cut(s) 273, 2198, 3933
BcgI CGANNNNNNTGC 2 cut(s) 4676, 4710
BciT130I CCWGG 5 cut(s) 833, 1217, 2205, 2336, 3250
BclI TGATCA 3 cut(s) 1780, 3055, 3471
BcnI CCSGG 1 cut(s) 2459
BcoDI GTCTC 7 cut(s) 214, 972, 1313, 1854, 2616, 3888, 4156
BfmI CTRYAG 3 cut(s) 217, 1037, 2069
BfoI RGCGCY 4 cut(s) 2827, 3306, 3362, 4289
BfrI CTTAAG 1 cut(s) 3089
BglII AGATCT 1 cut(s) 3604
BlnI CCTAGG 1 cut(s) 3149
BmcAI AGTACT 1 cut(s) 20
Bme1390I CCNGG 6 cut(s) 833, 1217, 2205, 2336, 2459, 3250
Bme18I GGWCC 2 cut(s) 3029, 3422
BmeRI GACNNNNNGTC 1 cut(s) 3139
BmeT110I CYCGRG 2 cut(s) 969, 3666
BmgBI CACGTC 1 cut(s) 4407
BmgT120I GGNCC 4 cut(s) 2429, 3029, 3153, 3422
BmrFI CCNGG 6 cut(s) 833, 1217, 2205, 2336, 2459, 3250
BmrI ACTGGG 1 cut(s) 3970
BmuI ACTGGG 1 cut(s) 3970
BoxI GACNNNNGTC 1 cut(s) 1010
BpiI GAAGAC 4 cut(s) 757, 843, 4046, 4539
BplI GAGNNNNNCTC 4 cut(s) 1033, 1065, 3649, 3681
BpmI CTGGAG 4 cut(s) 1752, 1898, 2357, 3745
Bpu10I CCTNAGC 1 cut(s) 3944
BpuEI CTTGAG 1 cut(s) 1337
BpuMI CCSGG 1 cut(s) 2459
BsaAI YACGTR 3 cut(s) 2134, 3382, 4090
BsaBI GATNNNNATC 3 cut(s) 865, 3285, 3591
BsaHI GRCGYC 3 cut(s) 237, 3359, 4286
BsaI GGTCTC 2 cut(s) 2616, 3888
BsaWI WCCGGW 2 cut(s) 361, 3900
BsaXI ACNNNNNCTCC 2 cut(s) 4643, 4673
Bse21I CCTNAGG 1 cut(s) 3081
Bse3DI GCAATG 6 cut(s) 519, 690, 717, 1353, 3907, 4442
Bse8I GATNNNNATC 3 cut(s) 865, 3285, 3591
BseAI TCCGGA 2 cut(s) 361, 3900
BseBI CCWGG 5 cut(s) 833, 1217, 2205, 2336, 3250
BseJI GATNNNNATC 3 cut(s) 865, 3285, 3591
BseMI GCAATG 6 cut(s) 519, 690, 717, 1353, 3907, 4442
BseMII CTCAG 9 cut(s) 1482, 2356, 2627, 2688, 2757, 3072, 3912, 4493, 4677
BseRI GAGGAG 3 cut(s) 2478, 4618, 4651
BseSI GKGCMC 2 cut(s) 2055, 3571
BsgI GTGCAG 8 cut(s) 48, 132, 765, 1301, 1308, 2086, 2292, 4219
Bsh1236I CGCG 1 cut(s) 2175
Bsh1285I CGRYCG 1 cut(s) 4228
BshFI GGCC 7 cut(s) 163, 1825, 2388, 2430, 3118, 3154, 3575
BshNI GGYRCC 2 cut(s) 3358, 4285
BsiEI CGRYCG 1 cut(s) 4228
BsiHKAI GWGCWC 6 cut(s) 1246, 2343, 3571, 4089, 4264, 4661
BsiHKCI CYCGRG 2 cut(s) 969, 3666
BsiSI CCGG 4 cut(s) 362, 2459, 3800, 3901
BsiWI CGTACG 1 cut(s) 254
BslFI GGGAC 2 cut(s) 4532, 4628
BsmAI GTCTC 7 cut(s) 214, 972, 1313, 1854, 2616, 3888, 4156
BsmFI GGGAC 2 cut(s) 4532, 4628
BsmI GAATGC 1 cut(s) 1458
BsnI GGCC 7 cut(s) 163, 1825, 2388, 2430, 3118, 3154, 3575
Bso31I GGTCTC 2 cut(s) 2616, 3888
BsoBI CYCGRG 2 cut(s) 969, 3666
Bsp1286I GDGCHC 8 cut(s) 1246, 2055, 2343, 3571, 4089, 4264, 4393, 4661
Bsp13I TCCGGA 2 cut(s) 361, 3900
Bsp1407I TGTACA 3 cut(s) 1223, 2279, 2782
Bsp19I CCATGG 2 cut(s) 879, 2433
BspACI CCGC 7 cut(s) 2244, 2385, 2754, 3311, 3680, 4240, 4298
BspANI GGCC 7 cut(s) 163, 1825, 2388, 2430, 3118, 3154, 3575
BspCNI CTCAG 9 cut(s) 1483, 2355, 2626, 2689, 2756, 3073, 3913, 4494, 4676
BspEI TCCGGA 2 cut(s) 361, 3900
BspFNI CGCG 1 cut(s) 2175
BspMAI CTGCAG 1 cut(s) 221
BspQI GCTCTTC 1 cut(s) 3974
BspT107I GGYRCC 2 cut(s) 3358, 4285
BspTI CTTAAG 1 cut(s) 3089
BspTNI GGTCTC 2 cut(s) 2616, 3888
BsrDI GCAATG 6 cut(s) 519, 690, 717, 1353, 3907, 4442
BsrGI TGTACA 3 cut(s) 1223, 2279, 2782
BssNAI GTATAC 2 cut(s) 2137, 4512
BssNI GRCGYC 3 cut(s) 237, 3359, 4286
BssT1I CCWWGG 6 cut(s) 815, 879, 1392, 2433, 3149, 3413
Bst1107I GTATAC 2 cut(s) 2137, 4512
Bst2UI CCWGG 5 cut(s) 833, 1217, 2205, 2336, 3250
Bst6I CTCTTC 4 cut(s) 1702, 1714, 1812, 3974
BstACI GRCGYC 3 cut(s) 237, 3359, 4286
BstAFI CTTAAG 1 cut(s) 3089
BstAPI GCANNNNNTGC 2 cut(s) 3493, 4381
BstAUI TGTACA 3 cut(s) 1223, 2279, 2782
BstBAI YACGTR 3 cut(s) 2134, 3382, 4090
BstC8I GCNNGC 9 cut(s) 100, 144, 262, 777, 1664, 2222, 2828, 3733, 4290
BstDSI CCRYGG 2 cut(s) 879, 2433
BstFNI CGCG 1 cut(s) 2175
BstH2I RGCGCY 4 cut(s) 2827, 3306, 3362, 4289
BstHHI GCGC 5 cut(s) 1360, 2826, 3305, 3361, 4288
BstMAI GTCTC 7 cut(s) 214, 972, 1313, 1854, 2616, 3888, 4156
BstMCI CGRYCG 1 cut(s) 4228
BstMWI GCNNNNNNNGC 6 cut(s) 104, 518, 3493, 3995, 4381, 4703
BstNI CCWGG 5 cut(s) 833, 1217, 2205, 2336, 3250
BstNSI RCATGY 2 cut(s) 779, 2112
BstPAI GACNNNNGTC 1 cut(s) 1010
BstSCI CCNGG 6 cut(s) 831, 1215, 2203, 2334, 2457, 3248
BstSFI CTRYAG 3 cut(s) 217, 1037, 2069
BstSLI GKGCMC 2 cut(s) 2055, 3571
BstUI CGCG 1 cut(s) 2175
BstV2I GAAGAC 4 cut(s) 757, 843, 4046, 4539
BstXI CCANNNNNNTGG 1 cut(s) 4653
BstZ17I GTATAC 2 cut(s) 2137, 4512
Bsu36I CCTNAGG 1 cut(s) 3081
BsuRI GGCC 7 cut(s) 163, 1825, 2388, 2430, 3118, 3154, 3575
BtgI CCRYGG 2 cut(s) 879, 2433
BtrI CACGTC 1 cut(s) 4407
BtsI GCAGTG 7 cut(s) 202, 226, 1115, 1289, 2098, 2916, 4645
Cac8I GCNNGC 9 cut(s) 100, 144, 262, 777, 1664, 2222, 2828, 3733, 4290
CaiI CAGNNNCTG 2 cut(s) 3661, 3710
CfoI GCGC 5 cut(s) 1360, 2826, 3305, 3361, 4288
Cfr13I GGNCC 4 cut(s) 2429, 3029, 3153, 3422
Csp6I GTAC 9 cut(s) 19, 255, 805, 1056, 1224, 2280, 2783, 4246, 4597
CviQI GTAC 9 cut(s) 19, 255, 805, 1056, 1224, 2280, 2783, 4246, 4597
DinI GGCGCC 2 cut(s) 3360, 4287
DraI TTTAAA 2 cut(s) 493, 2973
DraIII CACNNNGTG 2 cut(s) 1250, 1832
DrdI GACNNNNNNGTC 1 cut(s) 187
DriI GACNNNNNGTC 1 cut(s) 3139
DseDI GACNNNNNNGTC 1 cut(s) 187
EaeI YGGCCR 1 cut(s) 2386
Eam1104I CTCTTC 4 cut(s) 1702, 1714, 1812, 3974
Eam1105I GACNNNNNGTC 1 cut(s) 3139
EarI CTCTTC 4 cut(s) 1702, 1714, 1812, 3974
Ecl136II GAGCTC 1 cut(s) 2341
Eco130I CCWWGG 6 cut(s) 815, 879, 1392, 2433, 3149, 3413
Eco24I GRGCYC 2 cut(s) 2343, 4393
Eco31I GGTCTC 2 cut(s) 2616, 3888
Eco47I GGWCC 2 cut(s) 3029, 3422
Eco47III AGCGCT 1 cut(s) 2825
Eco53kI GAGCTC 1 cut(s) 2341
Eco57I CTGAAG 4 cut(s) 294, 1887, 3066, 3687
Eco72I CACGTG 1 cut(s) 4090
Eco81I CCTNAGG 1 cut(s) 3081
Eco88I CYCGRG 2 cut(s) 969, 3666
EcoICRI GAGCTC 1 cut(s) 2341
EcoO109I RGGNCCY 1 cut(s) 2429
EcoRI GAATTC 2 cut(s) 2899, 3237
EcoRII CCWGG 5 cut(s) 831, 1215, 2203, 2334, 3248
EcoT14I CCWWGG 6 cut(s) 815, 879, 1392, 2433, 3149, 3413
EcoT22I ATGCAT 2 cut(s) 719, 1460
EcoT38I GRGCYC 2 cut(s) 2343, 4393
EgeI GGCGCC 2 cut(s) 3360, 4287
EheI GGCGCC 2 cut(s) 3360, 4287
ErhI CCWWGG 6 cut(s) 815, 879, 1392, 2433, 3149, 3413
FalI AAGNNNNNCTT 6 cut(s) 2208, 2240, 3724, 3756, 4553, 4585
FaqI GGGAC 2 cut(s) 4532, 4628
FauI CCCGC 2 cut(s) 4247, 4291
FauNDI CATATG 3 cut(s) 247, 792, 3877
FbaI TGATCA 3 cut(s) 1780, 3055, 3471
FblI GTMKAC 4 cut(s) 1036, 2136, 3071, 4511
FriOI GRGCYC 2 cut(s) 2343, 4393
FspI TGCGCA 1 cut(s) 1359
GlaI GCGC 5 cut(s) 1359, 2825, 3304, 3360, 4287
GsuI CTGGAG 4 cut(s) 1752, 1898, 2357, 3745
HaeII RGCGCY 4 cut(s) 2827, 3306, 3362, 4289
HaeIII GGCC 7 cut(s) 163, 1825, 2388, 2430, 3118, 3154, 3575
HapII CCGG 4 cut(s) 362, 2459, 3800, 3901
HhaI GCGC 5 cut(s) 1360, 2826, 3305, 3361, 4288
Hin1I GRCGYC 3 cut(s) 237, 3359, 4286
Hin6I GCGC 5 cut(s) 1358, 2824, 3303, 3359, 4286
HinP1I GCGC 5 cut(s) 1358, 2824, 3303, 3359, 4286
HincII GTYRAC 5 cut(s) 235, 241, 557, 1336, 2728
HindII GTYRAC 5 cut(s) 235, 241, 557, 1336, 2728
HindIII AAGCTT 3 cut(s) 105, 1869, 2222
HpaI GTTAAC 1 cut(s) 2728
HpaII CCGG 4 cut(s) 362, 2459, 3800, 3901
Hpy99I CGWCG 1 cut(s) 404
HpyCH4IV ACGT 8 cut(s) 237, 1147, 2133, 2311, 2566, 3381, 4089, 4406
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 518, 3493, 3995, 4381, 4703
HpySE526I ACGT 8 cut(s) 237, 1147, 2133, 2311, 2566, 3381, 4089, 4406
Hsp92I GRCGYC 3 cut(s) 237, 3359, 4286
HspAI GCGC 5 cut(s) 1358, 2824, 3303, 3359, 4286
KasI GGCGCC 2 cut(s) 3358, 4285
Kpn2I TCCGGA 2 cut(s) 361, 3900
Ksp22I TGATCA 3 cut(s) 1780, 3055, 3471
KspAI GTTAAC 1 cut(s) 2728
LguI GCTCTTC 1 cut(s) 3974
MaeII ACGT 8 cut(s) 237, 1147, 2133, 2311, 2566, 3381, 4089, 4406
MfeI CAATTG 1 cut(s) 3021
MhlI GDGCHC 8 cut(s) 1246, 2055, 2343, 3571, 4089, 4264, 4393, 4661
MluI ACGCGT 1 cut(s) 2173
Mly113I GGCGCC 2 cut(s) 3359, 4286
MmeI TCCRAC 7 cut(s) 237, 562, 1476, 1926, 3510, 3765, 4208
Mph1103I ATGCAT 2 cut(s) 719, 1460
MroI TCCGGA 2 cut(s) 361, 3900
MroXI GAANNNNTTC 2 cut(s) 2657, 2796
MslI CAYNNNNRTG 2 cut(s) 917, 939
MspCI CTTAAG 1 cut(s) 3089
MspI CCGG 4 cut(s) 362, 2459, 3800, 3901
MspR9I CCNGG 6 cut(s) 833, 1217, 2205, 2336, 2459, 3250
MunI CAATTG 1 cut(s) 3021
Mva1269I GAATGC 1 cut(s) 1458
MvaI CCWGG 5 cut(s) 833, 1217, 2205, 2336, 3250
MvnI CGCG 1 cut(s) 2175
MwoI GCNNNNNNNGC 6 cut(s) 104, 518, 3493, 3995, 4381, 4703
NarI GGCGCC 2 cut(s) 3359, 4286
NciI CCSGG 1 cut(s) 2459
NcoI CCATGG 2 cut(s) 879, 2433
NdeI CATATG 3 cut(s) 247, 792, 3877
NmuCI GTSAC 7 cut(s) 910, 1623, 2461, 2841, 3750, 3840, 4682
NsbI TGCGCA 1 cut(s) 1359
NsiI ATGCAT 2 cut(s) 719, 1460
NspI RCATGY 2 cut(s) 779, 2112
PaeI GCATGC 1 cut(s) 779
PciSI GCTCTTC 1 cut(s) 3974
PctI GAATGC 1 cut(s) 1458
PdmI GAANNNNTTC 2 cut(s) 2657, 2796
Pfl23II CGTACG 1 cut(s) 254
PflMI CCANNNNNTGG 5 cut(s) 1832, 3026, 3419, 3727, 3817
PfoI TCCNGGA 1 cut(s) 2334
PluTI GGCGCC 2 cut(s) 3362, 4289
PmaCI CACGTG 1 cut(s) 4090
PmlI CACGTG 1 cut(s) 4090
Ppu21I YACGTR 3 cut(s) 2134, 3382, 4090
PshAI GACNNNNGTC 1 cut(s) 1010
PshBI ATTAAT 1 cut(s) 528
PsiI TTATAA 1 cut(s) 4025
Psp124BI GAGCTC 1 cut(s) 2343
Psp6I CCWGG 5 cut(s) 831, 1215, 2203, 2334, 3248
PspCI CACGTG 1 cut(s) 4090
PspGI CCWGG 5 cut(s) 831, 1215, 2203, 2334, 3248
PspLI CGTACG 1 cut(s) 254
PspPI GGNCC 4 cut(s) 2429, 3029, 3153, 3422
PstI CTGCAG 1 cut(s) 221
PstNI CAGNNNCTG 2 cut(s) 3661, 3710
RsaI GTAC 9 cut(s) 20, 256, 806, 1057, 1225, 2281, 2784, 4247, 4598
RsaNI GTAC 9 cut(s) 19, 255, 805, 1056, 1224, 2280, 2783, 4246, 4597
RseI CAYNNNNRTG 2 cut(s) 917, 939
SacI GAGCTC 1 cut(s) 2343
SapI GCTCTTC 1 cut(s) 3974
Sau96I GGNCC 4 cut(s) 2429, 3029, 3153, 3422
ScaI AGTACT 1 cut(s) 20
ScrFI CCNGG 6 cut(s) 833, 1217, 2205, 2336, 2459, 3250
SduI GDGCHC 8 cut(s) 1246, 2055, 2343, 3571, 4089, 4264, 4393, 4661
SfcI CTRYAG 3 cut(s) 217, 1037, 2069
SfoI GGCGCC 2 cut(s) 3360, 4287
SinI GGWCC 2 cut(s) 3029, 3422
SmiMI CAYNNNNRTG 2 cut(s) 917, 939
SmlI CTYRAG 2 cut(s) 1316, 3089
SmoI CTYRAG 2 cut(s) 1316, 3089
SphI GCATGC 1 cut(s) 779
SsiI CCGC 7 cut(s) 2244, 2385, 2754, 3311, 3680, 4240, 4298
SspDI GGCGCC 2 cut(s) 3358, 4285
SspI AATATT 2 cut(s) 2605, 3202
SstI GAGCTC 1 cut(s) 2343
StyD4I CCNGG 6 cut(s) 831, 1215, 2203, 2334, 2457, 3248
StyI CCWWGG 6 cut(s) 815, 879, 1392, 2433, 3149, 3413
TaiI ACGT 8 cut(s) 240, 1150, 2136, 2314, 2569, 3384, 4092, 4409
TaqI TCGA 7 cut(s) 1976, 2239, 2670, 3376, 3892, 4421, 4625
TaqII GACCGA 2 cut(s) 447, 4214
TatI WGTACW 7 cut(s) 18, 804, 1055, 1223, 2279, 2782, 4596
TauI GCSGC 3 cut(s) 2388, 2756, 3682
TseFI GTSAC 7 cut(s) 910, 1623, 2461, 2841, 3750, 3840, 4682
Tsp45I GTSAC 7 cut(s) 910, 1623, 2461, 2841, 3750, 3840, 4682
TspGWI ACGGA 2 cut(s) 2705, 3786
Van91I CCANNNNNTGG 5 cut(s) 1832, 3026, 3419, 3727, 3817
Vha464I CTTAAG 1 cut(s) 3089
VneI GTGCAC 1 cut(s) 3567
VpaK11BI GGWCC 2 cut(s) 3029, 3422
VspI ATTAAT 1 cut(s) 528
XceI RCATGY 2 cut(s) 779, 2112
XcmI CCANNNNNNNNNTGG 2 cut(s) 839, 1415
XmaJI CCTAGG 1 cut(s) 3149
XmiI GTMKAC 4 cut(s) 1036, 2136, 3071, 4511
XmnI GAANNNNTTC 2 cut(s) 2657, 2796
ZraI GACGTC 1 cut(s) 238
ZrmI AGTACT 1 cut(s) 20
Zsp2I ATGCAT 2 cut(s) 719, 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.