Rh6CG188700
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase FAB1D

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
30661066 .. 30669884
8819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG188700.1

Sequence Viewer

Length: 4728 bp
ATGTATGGTATGTGTCAGTACTGTGGTGCAGAATTGACACAACCTAAAGATGAAAAGAAGGAACATGATAATCTGAAAACCTTACCGTCAGATAGGGCTTGCAAAGCTTGTGCAGAAAAACAGGAGAGAGGATCTATCAAGCAGGCCAATGGAATGTCAAGGCCAACGATCAGTCCAATGACTTCCTTGTCAAGCAGTGATAGTTCTGTCTCCAACTGCAGTGAATTTTCTGTTGATGTCAACTCATATGATCGTTCGGCAGGCACGAATAATGACCAGCTATGGGAACCCCCTTCTGCAAACACTTGTGGATCATCTAGCGAAACTGAGAATTCAAATTCTTCAGAAGGTGAAATGGCTGACTGGATATGGGATCCTCCTGAACCTGATGATCCGGAGGACGATGTGGAGGGTAGTGTGGCTTTCAATGACGATGATGATGATGAGTGTGGTGATGGCATGAAATGGGGCAAACCAAGTTCTTTGAGTCGCTCTAAAGATGAAGGAAGTGGGAGCTATAAGTTTAAAGAGGAAAAACAAAGAGCAATGGAAGCAGTTATTAATGGAAAGTTCAAGGCTCTTGTCAGTCAACTACTTACATCTGTTGGTGTTGTTGGATCTTCTGGGGAGGATGGTGAAAGTTGGGTGGACATTATTACTTCTTTGTCATGGGAAGCTGCTTCATTTTTGAAACCTGATGCTGTTGTTGGTAAAGCAATGGATATAGATGGCTATGTGAAAGTAAAATGCATTGCAACTGGTGATCGCTGCCAAAGTCAATTAGTAAAAGGTATGGTCTTCAAAAAGCATGCTGCACACAAGCATATGCCAATCAAGTACAAGAACCCAAGGTTGTTGCTAATCCAGGGAGTTCTTGGTCAGTCTTCAAGTGGATTGTCATCATTTGATTCCATGGAGCAGGAACAAGATTACTTGAAGTATGTCACCGAAATGCTAGAACTGTGTCATCCAAATGTGGTTTTAGTGGAAAAAACTGTGTCTCGGGATATTCAAGAGTCTATTCTCGCAAAAAGAATGACACTGGTCTATGACATGAAGCTCCATCGTCTACAGAGAATTGCTCTTTGTACTGGATCACCAATTTTATCATCAGATACAATGACGAGTCAAAAGCTAAAGCAGTGCGACTCTTTTCACATTGAAAAATTTATAGAGGAACGTGCTGGTTTGGGTGGAGGAAAGATGCCAAGTAAAACATTGATGTTTATTGAGGGCTGTCCTACACGCCAGGGTTGTACAATTTTGCTGAAAGGAGCACAGAGTGATGAATTGAAGAAGATCAAGTGTGTAGTGCAGTGTGCAGTTATCTTGGCATATCATTTAATACTTGAGACTTCTTTCCTTGTTGACCAGAGAGCAATGTTCTTTGCGCATCCTTTGTTTGGTGGAGCAAATCACTTGTCCAAGGAAGTAGCAAACCAGTTTTCCACTGGTAACAAATCCTTTAATTTAGCATCCAGTAATTCATGCATTCCACATCATAGGGAGTCTAGTGGTGAAACTGAGTCGGATGCAGTTGATATTCTCATTTCTGATGGATTCCATGAAGGATCTTCCCAAAATGCTGACTTGGAATTACAAGGCAGTTCCACATTATATGAACCATACAATCCTGTCATATTTTCTGGCTTCTCGTCACTTTCAGCTTCACTAAAGAAAGTTATAGGGGAAAGCTTGCCTCTAGCATCTACTTCTTATCAATCTCTCTCTTCATACTTTGGATTAAATGGAAGAGAACTGAATGGTCAGATTACAAAGTCTGTTTCTATTTCAACATCTCCAGAGGCGACTGATCAGTGTGATGTTGAAGATAGAGGAAGTTCTGATGAAGAGAGGCCACTTAGTGGTGGAGAAATCCAGTCTCCATTTACTTGCACTGAAGCTTCTCTGGAGATTGAAAAGGATGGTGGCAACAATGAAGACCCAATGCAGAGCAAGAATGACATCAGCAAAGTGTTGGATTCCCAGAGTATTTTGGTTTTGATGTCGAGCAAGAATGTTAAAGGGAATGTTTGTGAGCAAAGCCATTTTTCTCATATCATGTTCTACAAGAATTTTGATGTGCCCATCGGAAAGTTTCTACAGGATAATATACTGAATCAGAGAAGCCATTGCACAGCATGTGGTGAGCTGCCAGAAGCTCACGTATACTGTTATGCACATCATAACAAGCAGCTTACCATACGCGTTAAACGGCTTCTTACAGGGCATTTGCCTGGTGAAGCAGAAGGCAAGCTTTGGATGTGGAGTCGATGTGGTAAATGTAAATCTGTGAAGGGAAAATCAAAGTGTACAAAAAGAGTCTTGATTTCCAGTGCTGCACGTTGTCTTTCATTTGGAAATTTCCTGGAGCTCAGTTTCTCAAATCACTCTCTGTCTAATATATTTTCTAGCTGCAGCCATTCTTTGCAAATGGACTTTCTCTACTTCTTTGGATTAGGCCCCATGGTTGCTATGTTGAAAAACTCCCCGGTCACAATTTATACTGTGTCTGTGCCTCCTCTAAAACTTCCATTCAGCAATTCAATTAGGCAAGAGTGGTTTGCAAAAGAAATTGAGAATGTATTAGCGAAAGGACGTATGCTGTTAAGTGAGGTTGGCAATTCTTTGAAGAATATTAGGTCTCAGTTTGATGGCATGACTTTGAAACTGCAAGGCTCCTTGAAAAAATTCTCTGACATCGAAGATATGCTAAGTCAAGAAGAATCTGAGCGAGAGGTAAACATCCGTAATGCTGTTAACGAGAATAGGAACTCAGACCAAGCCGCTTACAAACTTCTTGGCTTTAACCGTGTACATTGGGAACTTCTTCTTCAATCATGCGTTTGGGATCAGCGCTTGCACTCGTTACTGTCACCAACTCCTATGATGATCCATTCCATAGCTTCTGATAAGGTAAGCCAAGAAGTGAATTCAGGTATTCATGGCACTGCTGAAAGTATTATGGGAAGAGGTGAAAACTGCATTGATGGTTCTTCCAATTTAAAAGTTGAGTTAAATATAGCTGCAAAAGCAGATGAATTTCCAATTAAAGAAATTCCAATTGGTGGTCCTGTTGAAGAATCTGAAGGAGCTGATCAACATAACGAGTCTACTTTGCCTGAGGGTCTTAAGACACCAAATGTGGGTGGTGCAAGGCCAAAAAGATTTGCTGACCACAAGTCCAATCCTAGGCCCAATGGCTCCACTGATGGTCATTCTGACAAGTATGTTGAAGGGAATATTACTTTCGCTGATGAACTAGATGAAGATAGAGGAATTCCTGTTTCCAGGGAAAATGAGGATCCTTGTTCAGTTGTTGATTCAAATCTATCACTGATGGGCGCTTCTCTGCACTCACGATCATCCAAGTTTGACAGTTCAAGTGATTGGTTTTGGGCGCCCTTCTCTGAAATTCGACAAGTAGGTATGAAGGATCTACAAAGAGTCCTTCCAAGGTTTGGACCCATGAGTAGCTATACATCAGAATACTTACCCACAGCATATCAGTTGATCACAGAGGAAGGGCAAATGTTGCACATTCCTCTAGGAACTGATAATTATATAGTGTCGGACTATGATGGTGAACTTTCAAGTGTGATTGCTTGTGCACTGGCCTTTTTGAAAGATCCACATCTTCAAACAGATGTTCCTGTTGATGACGAGTATGGAATTGCTGCTAGAACATTTGAGAGTTTACAGAGTCTGGCTCGGGTTCCTTCGCCGCATCAAAGCTCAAATGGTTCTTCAGATTCTGATTCAGTCCATTCTATTGCAAGCATTTCTTTTGATGAGTCACGCTTCTCCAGTTTTGACGGATTGAACTTGTTGGATTCTCTGGTTCCGGCAGGAACCCACCCAATGGTAACTCTAAGAGTTGCCAAGTCACTTGGCAAGGAGAAATATACTGTATTATGTCCATATGCCAATCAGTTTCGAGACCTCCGGAATCATTGCTGCCAATCTGAGGTTGATTATATTGCTTCCCTAAGCCGTTGTAGAAACTGGGATGCTAAAGGTGGGAAGAGCAAAGCCTTTTTTGCCAAAACAGTTGATGACAGGTTGATTATAAAAGAAATCAAGAAGACAGAATTTGAGTCATTTGTAAAGTTTGCAGATGCTTATTTTGAGCACGTGAACAAGTCATTTGAGAAGGGAAATCAAACTTGCCTTGTAAAAATTCTTGGGATTTATCAGGTGGTTGTGAGACAGACAAAAAGTGGGAAAGAGATGAAACATGATCTGATGGTTATGGAGAACCTTACCTTCGGTCGGAACTGCACCCGCCTGTACGATCTTAAAGGTGCTCTACATGACCGTTTCAATTTGGCGCCTGCTGGTGCGGGAGATGTTCTTCTGGATCAGAACTTTGTCAATGACATGAACTCATCTCCATTTTATGTCAGTAACCAAGAAAAGCAAAAATTGCAACGGGCTCTGTGGAATGACACGTCTTTTCTCAATTCAATCAATGTTATGGATTATTCATTGCTTGTCGGGATTGATACACACAGACAGGAGCTTGTATGTGGCATTATTGATTATCTGAGGCAGTATACATGGGACAAGCACCTAGAGTCATGGGTGAAGTCTTCACTTGTGCCAAAGAATGTCTTGCCGACTGTTATCTCTCCTAAAGAGTACAAGAGGAGATTCAGGAAGTTCATGTCGAAGAATATATGCAGTGTCCCAGATCACTGGTGCTCCTCAGAATCCTCTGATCCTTGA

Protein Analysis

1575

Amino Acids

174.74

Weight (kDa)

5.61

Isoelectric Point (pI)

48.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 211 - 450 2.4e-20 TCP-1/cpn60 chaperonin family
PIP5K PF01504 1339 - 1505 4.2e-34 Phosphatidylinositol-4-phosphate 5-Kinase
PIP5K PF01504 1506 - 1558 9.7e-09 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4070
AasI GACNNNNNNGTC 1 cut(s) 187
Acc16I TGCGCA 1 cut(s) 1392
AccB1I GGYRCC 2 cut(s) 3400, 4330
AccB7I CCANNNNNTGG 4 cut(s) 1865, 3068, 3461, 3862
AccI GTMKAC 4 cut(s) 1069, 2169, 3113, 4556
AccII CGCG 1 cut(s) 2208
AccIII TCCGGA 2 cut(s) 394, 3945
AciI CCGC 4 cut(s) 2787, 3725, 4285, 4343
AcuI CTGAAG 4 cut(s) 327, 1920, 3108, 3732
AcvI CACGTG 1 cut(s) 4135
AcyI GRCGYC 2 cut(s) 3401, 4331
AdeI CACNNNGTG 2 cut(s) 1283, 1865
AfaI GTAC 8 cut(s) 20, 839, 1090, 1258, 2314, 2817, 4292, 4643
AfeI AGCGCT 1 cut(s) 2858
AflII CTTAAG 1 cut(s) 3131
AflIII ACRYGT 2 cut(s) 2206, 4449
AhdI GACNNNNNGTC 1 cut(s) 3181
AjiI CACGTC 1 cut(s) 4452
AjnI CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3290
AjuI GAANNNNNNNTTGG 2 cut(s) 3048, 3080
Alw21I GWGCWC 6 cut(s) 1279, 2376, 3613, 4134, 4309, 4706
Alw26I GTCTC 7 cut(s) 214, 1005, 1346, 1887, 2649, 3933, 4201
Alw44I GTGCAC 1 cut(s) 3609
AlwNI CAGNNNCTG 2 cut(s) 3706, 3755
Ama87I CYCGRG 2 cut(s) 1002, 3711
Aor13HI TCCGGA 2 cut(s) 394, 3945
Aor51HI AGCGCT 1 cut(s) 2858
AoxI GGCC 7 cut(s) 144, 161, 1856, 2461, 3158, 3194, 3615
ApaLI GTGCAC 1 cut(s) 3609
ArsI GACNNNNNNTTYG 2 cut(s) 1406, 1438
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 2 cut(s) 2690, 2829
AspA2I CCTAGG 1 cut(s) 3191
AspLEI GCGC 5 cut(s) 1393, 2859, 3347, 3403, 4333
AspS9I GGNCC 4 cut(s) 2462, 3071, 3195, 3464
AsuC2I CCSGG 1 cut(s) 2492
AvaI CYCGRG 2 cut(s) 1002, 3711
AvaII GGWCC 2 cut(s) 3071, 3464
AvrII CCTAGG 1 cut(s) 3191
AxyI CCTNAGG 1 cut(s) 3123
BaeGI GKGCMC 2 cut(s) 2088, 3613
BamHI GGATCC 2 cut(s) 373, 3304
BanI GGYRCC 2 cut(s) 3400, 4330
BanII GRGCYC 2 cut(s) 2376, 4438
BbrPI CACGTG 1 cut(s) 4135
BbsI GAAGAC 5 cut(s) 790, 876, 1947, 4091, 4584
Bbv12I GWGCWC 6 cut(s) 1279, 2376, 3613, 4134, 4309, 4706
BceAI ACGGC 2 cut(s) 2231, 3978
BciT130I CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3292
BclI TGATCA 3 cut(s) 1813, 3097, 3513
BcnI CCSGG 1 cut(s) 2492
BcoDI GTCTC 7 cut(s) 214, 1005, 1346, 1887, 2649, 3933, 4201
BfmI CTRYAG 4 cut(s) 217, 1070, 2102, 2416
BfoI RGCGCY 4 cut(s) 2860, 3348, 3404, 4334
BfrI CTTAAG 1 cut(s) 3131
BlnI CCTAGG 1 cut(s) 3191
BmcAI AGTACT 1 cut(s) 20
Bme1390I CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3292
Bme18I GGWCC 2 cut(s) 3071, 3464
BmeRI GACNNNNNGTC 1 cut(s) 3181
BmeT110I CYCGRG 2 cut(s) 1002, 3711
BmgBI CACGTC 1 cut(s) 4452
BmgT120I GGNCC 4 cut(s) 2462, 3071, 3195, 3464
BmrFI CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3292
BmrI ACTGGG 1 cut(s) 4015
BmsI GCATC 9 cut(s) 688, 1194, 1402, 1484, 1522, 1715, 3736, 4000, 4108
BmuI ACTGGG 1 cut(s) 4015
BoxI GACNNNNGTC 1 cut(s) 1043
BpiI GAAGAC 5 cut(s) 790, 876, 1947, 4091, 4584
BplI GAGNNNNNCTC 4 cut(s) 1066, 1098, 3694, 3726
BpmI CTGGAG 4 cut(s) 1785, 1931, 2390, 3790
Bpu10I CCTNAGC 1 cut(s) 3989
BpuEI CTTGAG 1 cut(s) 1370
BpuMI CCSGG 1 cut(s) 2492
BsaAI YACGTR 2 cut(s) 2167, 4135
BsaBI GATNNNNATC 3 cut(s) 898, 3327, 3633
BsaHI GRCGYC 2 cut(s) 3401, 4331
BsaI GGTCTC 2 cut(s) 2649, 3933
BsaWI WCCGGW 2 cut(s) 394, 3945
BsaXI ACNNNNNCTCC 4 cut(s) 2260, 2290, 4688, 4718
Bse21I CCTNAGG 1 cut(s) 3123
Bse3DI GCAATG 7 cut(s) 552, 723, 750, 1386, 2131, 3952, 4487
Bse8I GATNNNNATC 3 cut(s) 898, 3327, 3633
BseAI TCCGGA 2 cut(s) 394, 3945
BseBI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3292
BseJI GATNNNNATC 3 cut(s) 898, 3327, 3633
BseMI GCAATG 7 cut(s) 552, 723, 750, 1386, 2131, 3952, 4487
BseRI GAGGAG 3 cut(s) 2511, 4663, 4696
BseSI GKGCMC 2 cut(s) 2088, 3613
BsgI GTGCAG 8 cut(s) 48, 132, 798, 1334, 1341, 2325, 3338, 4264
Bsh1236I CGCG 1 cut(s) 2208
Bsh1285I CGRYCG 1 cut(s) 4273
BshFI GGCC 7 cut(s) 146, 163, 1858, 2463, 3160, 3196, 3617
BshNI GGYRCC 2 cut(s) 3400, 4330
BsiEI CGRYCG 1 cut(s) 4273
BsiHKAI GWGCWC 6 cut(s) 1279, 2376, 3613, 4134, 4309, 4706
BsiHKCI CYCGRG 2 cut(s) 1002, 3711
BsiSI CCGG 4 cut(s) 395, 2492, 3845, 3946
BslFI GGGAC 2 cut(s) 4577, 4673
BsmAI GTCTC 7 cut(s) 214, 1005, 1346, 1887, 2649, 3933, 4201
BsmFI GGGAC 2 cut(s) 4577, 4673
BsmI GAATGC 1 cut(s) 1491
BsnI GGCC 7 cut(s) 146, 163, 1858, 2463, 3160, 3196, 3617
Bso31I GGTCTC 2 cut(s) 2649, 3933
BsoBI CYCGRG 2 cut(s) 1002, 3711
Bsp1286I GDGCHC 8 cut(s) 1279, 2088, 2376, 3613, 4134, 4309, 4438, 4706
Bsp13I TCCGGA 2 cut(s) 394, 3945
Bsp1407I TGTACA 3 cut(s) 1256, 2312, 2815
Bsp19I CCATGG 2 cut(s) 912, 2466
BspACI CCGC 4 cut(s) 2787, 3725, 4285, 4343
BspANI GGCC 7 cut(s) 146, 163, 1858, 2463, 3160, 3196, 3617
BspEI TCCGGA 2 cut(s) 394, 3945
BspFNI CGCG 1 cut(s) 2208
BspMAI CTGCAG 2 cut(s) 221, 2420
BspQI GCTCTTC 1 cut(s) 4019
BspT107I GGYRCC 2 cut(s) 3400, 4330
BspTI CTTAAG 1 cut(s) 3131
BspTNI GGTCTC 2 cut(s) 2649, 3933
BsrDI GCAATG 7 cut(s) 552, 723, 750, 1386, 2131, 3952, 4487
BsrGI TGTACA 3 cut(s) 1256, 2312, 2815
BssNAI GTATAC 2 cut(s) 2170, 4557
BssNI GRCGYC 2 cut(s) 3401, 4331
BssT1I CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3191, 3455
Bst1107I GTATAC 2 cut(s) 2170, 4557
Bst2UI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3292
Bst6I CTCTTC 5 cut(s) 1735, 1747, 1845, 2965, 4019
BstACI GRCGYC 2 cut(s) 3401, 4331
BstAFI CTTAAG 1 cut(s) 3131
BstAPI GCANNNNNTGC 2 cut(s) 3535, 4426
BstAUI TGTACA 3 cut(s) 1256, 2312, 2815
BstBAI YACGTR 2 cut(s) 2167, 4135
BstC8I GCNNGC 9 cut(s) 100, 144, 262, 810, 1697, 2255, 2861, 3778, 4335
BstDSI CCRYGG 2 cut(s) 912, 2466
BstFNI CGCG 1 cut(s) 2208
BstH2I RGCGCY 4 cut(s) 2860, 3348, 3404, 4334
BstHHI GCGC 5 cut(s) 1393, 2859, 3347, 3403, 4333
BstMAI GTCTC 7 cut(s) 214, 1005, 1346, 1887, 2649, 3933, 4201
BstMCI CGRYCG 1 cut(s) 4273
BstMWI GCNNNNNNNGC 6 cut(s) 104, 551, 3032, 3535, 4040, 4426
BstNI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3292
BstNSI RCATGY 2 cut(s) 812, 2145
BstPAI GACNNNNGTC 1 cut(s) 1043
BstSCI CCNGG 6 cut(s) 864, 1248, 2236, 2367, 2490, 3290
BstSFI CTRYAG 4 cut(s) 217, 1070, 2102, 2416
BstSLI GKGCMC 2 cut(s) 2088, 3613
BstUI CGCG 1 cut(s) 2208
BstV2I GAAGAC 5 cut(s) 790, 876, 1947, 4091, 4584
BstX2I RGATCY 7 cut(s) 131, 373, 617, 1571, 3304, 3436, 3628
BstXI CCANNNNNNTGG 1 cut(s) 4698
BstYI RGATCY 7 cut(s) 131, 373, 617, 1571, 3304, 3436, 3628
BstZ17I GTATAC 2 cut(s) 2170, 4557
Bsu36I CCTNAGG 1 cut(s) 3123
BsuRI GGCC 7 cut(s) 146, 163, 1858, 2463, 3160, 3196, 3617
BtgI CCRYGG 2 cut(s) 912, 2466
BtrI CACGTC 1 cut(s) 4452
BtsI GCAGTG 6 cut(s) 202, 226, 1148, 1322, 2949, 4690
Cac8I GCNNGC 9 cut(s) 100, 144, 262, 810, 1697, 2255, 2861, 3778, 4335
CaiI CAGNNNCTG 2 cut(s) 3706, 3755
CfoI GCGC 5 cut(s) 1393, 2859, 3347, 3403, 4333
Cfr13I GGNCC 4 cut(s) 2462, 3071, 3195, 3464
Csp6I GTAC 8 cut(s) 19, 838, 1089, 1257, 2313, 2816, 4291, 4642
CviQI GTAC 8 cut(s) 19, 838, 1089, 1257, 2313, 2816, 4291, 4642
DinI GGCGCC 2 cut(s) 3402, 4332
DraI TTTAAA 2 cut(s) 526, 3006
DraIII CACNNNGTG 2 cut(s) 1283, 1865
DrdI GACNNNNNNGTC 1 cut(s) 187
DriI GACNNNNNGTC 1 cut(s) 3181
DseDI GACNNNNNNGTC 1 cut(s) 187
Eam1104I CTCTTC 5 cut(s) 1735, 1747, 1845, 2965, 4019
Eam1105I GACNNNNNGTC 1 cut(s) 3181
EarI CTCTTC 5 cut(s) 1735, 1747, 1845, 2965, 4019
Ecl136II GAGCTC 1 cut(s) 2374
Eco130I CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3191, 3455
Eco24I GRGCYC 2 cut(s) 2376, 4438
Eco31I GGTCTC 2 cut(s) 2649, 3933
Eco47I GGWCC 2 cut(s) 3071, 3464
Eco47III AGCGCT 1 cut(s) 2858
Eco53kI GAGCTC 1 cut(s) 2374
Eco57I CTGAAG 4 cut(s) 327, 1920, 3108, 3732
Eco72I CACGTG 1 cut(s) 4135
Eco81I CCTNAGG 1 cut(s) 3123
Eco88I CYCGRG 2 cut(s) 1002, 3711
EcoICRI GAGCTC 1 cut(s) 2374
EcoO109I RGGNCCY 1 cut(s) 2462
EcoRI GAATTC 3 cut(s) 331, 2932, 3279
EcoRII CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3290
EcoT14I CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3191, 3455
EcoT22I ATGCAT 2 cut(s) 752, 1493
EcoT38I GRGCYC 2 cut(s) 2376, 4438
EgeI GGCGCC 2 cut(s) 3402, 4332
EheI GGCGCC 2 cut(s) 3402, 4332
ErhI CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3191, 3455
FalI AAGNNNNNCTT 6 cut(s) 2241, 2273, 3769, 3801, 4598, 4630
FaqI GGGAC 2 cut(s) 4577, 4673
FauI CCCGC 2 cut(s) 4292, 4336
FauNDI CATATG 3 cut(s) 247, 825, 3922
FbaI TGATCA 3 cut(s) 1813, 3097, 3513
FblI GTMKAC 4 cut(s) 1069, 2169, 3113, 4556
FriOI GRGCYC 2 cut(s) 2376, 4438
FspI TGCGCA 1 cut(s) 1392
GlaI GCGC 5 cut(s) 1392, 2858, 3346, 3402, 4332
GsuI CTGGAG 4 cut(s) 1785, 1931, 2390, 3790
HaeII RGCGCY 4 cut(s) 2860, 3348, 3404, 4334
HaeIII GGCC 7 cut(s) 146, 163, 1858, 2463, 3160, 3196, 3617
HapII CCGG 4 cut(s) 395, 2492, 3845, 3946
HhaI GCGC 5 cut(s) 1393, 2859, 3347, 3403, 4333
Hin1I GRCGYC 2 cut(s) 3401, 4331
Hin6I GCGC 5 cut(s) 1391, 2857, 3345, 3401, 4331
HinP1I GCGC 5 cut(s) 1391, 2857, 3345, 3401, 4331
HincII GTYRAC 4 cut(s) 241, 590, 1369, 2761
HindII GTYRAC 4 cut(s) 241, 590, 1369, 2761
HindIII AAGCTT 4 cut(s) 105, 1693, 1902, 2255
HpaI GTTAAC 1 cut(s) 2761
HpaII CCGG 4 cut(s) 395, 2492, 3845, 3946
HpyCH4IV ACGT 6 cut(s) 1180, 2166, 2344, 2599, 4134, 4451
HpyF10VI GCNNNNNNNGC 6 cut(s) 104, 551, 3032, 3535, 4040, 4426
HpySE526I ACGT 6 cut(s) 1180, 2166, 2344, 2599, 4134, 4451
Hsp92I GRCGYC 2 cut(s) 3401, 4331
HspAI GCGC 5 cut(s) 1391, 2857, 3345, 3401, 4331
KasI GGCGCC 2 cut(s) 3400, 4330
Kpn2I TCCGGA 2 cut(s) 394, 3945
Ksp22I TGATCA 3 cut(s) 1813, 3097, 3513
KspAI GTTAAC 1 cut(s) 2761
LguI GCTCTTC 1 cut(s) 4019
LweI GCATC 9 cut(s) 688, 1194, 1402, 1484, 1522, 1715, 3736, 4000, 4108
MaeII ACGT 6 cut(s) 1180, 2166, 2344, 2599, 4134, 4451
MfeI CAATTG 1 cut(s) 3063
MflI RGATCY 7 cut(s) 131, 373, 617, 1571, 3304, 3436, 3628
MhlI GDGCHC 8 cut(s) 1279, 2088, 2376, 3613, 4134, 4309, 4438, 4706
MluI ACGCGT 1 cut(s) 2206
Mly113I GGCGCC 2 cut(s) 3401, 4331
MmeI TCCRAC 7 cut(s) 237, 595, 1509, 1959, 3552, 3810, 4253
Mph1103I ATGCAT 2 cut(s) 752, 1493
MroI TCCGGA 2 cut(s) 394, 3945
MroXI GAANNNNTTC 2 cut(s) 2690, 2829
MslI CAYNNNNRTG 2 cut(s) 950, 972
MspCI CTTAAG 1 cut(s) 3131
MspI CCGG 4 cut(s) 395, 2492, 3845, 3946
MspR9I CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3292
MunI CAATTG 1 cut(s) 3063
Mva1269I GAATGC 1 cut(s) 1491
MvaI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3292
MvnI CGCG 1 cut(s) 2208
MwoI GCNNNNNNNGC 6 cut(s) 104, 551, 3032, 3535, 4040, 4426
NarI GGCGCC 2 cut(s) 3401, 4331
NciI CCSGG 1 cut(s) 2492
NcoI CCATGG 2 cut(s) 912, 2466
NdeI CATATG 3 cut(s) 247, 825, 3922
NmuCI GTSAC 6 cut(s) 943, 1656, 2494, 2874, 3795, 3885
NsbI TGCGCA 1 cut(s) 1392
NsiI ATGCAT 2 cut(s) 752, 1493
NspI RCATGY 2 cut(s) 812, 2145
PaeI GCATGC 1 cut(s) 812
PciSI GCTCTTC 1 cut(s) 4019
PcsI WCGNNNNNNNCGW 1 cut(s) 263
PctI GAATGC 1 cut(s) 1491
PdmI GAANNNNTTC 2 cut(s) 2690, 2829
PflMI CCANNNNNTGG 4 cut(s) 1865, 3068, 3461, 3862
PfoI TCCNGGA 1 cut(s) 2367
PluTI GGCGCC 2 cut(s) 3404, 4334
PmaCI CACGTG 1 cut(s) 4135
PmlI CACGTG 1 cut(s) 4135
Ppu21I YACGTR 2 cut(s) 2167, 4135
PshAI GACNNNNGTC 1 cut(s) 1043
PshBI ATTAAT 1 cut(s) 561
PsiI TTATAA 1 cut(s) 4070
Psp124BI GAGCTC 1 cut(s) 2376
Psp6I CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3290
PspCI CACGTG 1 cut(s) 4135
PspGI CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3290
PspPI GGNCC 4 cut(s) 2462, 3071, 3195, 3464
PstI CTGCAG 2 cut(s) 221, 2420
PstNI CAGNNNCTG 2 cut(s) 3706, 3755
PsuI RGATCY 7 cut(s) 131, 373, 617, 1571, 3304, 3436, 3628
RsaI GTAC 8 cut(s) 20, 839, 1090, 1258, 2314, 2817, 4292, 4643
RsaNI GTAC 8 cut(s) 19, 838, 1089, 1257, 2313, 2816, 4291, 4642
RseI CAYNNNNRTG 2 cut(s) 950, 972
SacI GAGCTC 1 cut(s) 2376
SapI GCTCTTC 1 cut(s) 4019
Sau96I GGNCC 4 cut(s) 2462, 3071, 3195, 3464
ScaI AGTACT 1 cut(s) 20
ScrFI CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3292
SduI GDGCHC 8 cut(s) 1279, 2088, 2376, 3613, 4134, 4309, 4438, 4706
SfaNI GCATC 9 cut(s) 688, 1194, 1402, 1484, 1522, 1715, 3736, 4000, 4108
SfcI CTRYAG 4 cut(s) 217, 1070, 2102, 2416
SfoI GGCGCC 2 cut(s) 3402, 4332
SinI GGWCC 2 cut(s) 3071, 3464
SmiMI CAYNNNNRTG 2 cut(s) 950, 972
SmlI CTYRAG 2 cut(s) 1349, 3131
SmoI CTYRAG 2 cut(s) 1349, 3131
SphI GCATGC 1 cut(s) 812
SsiI CCGC 4 cut(s) 2787, 3725, 4285, 4343
SspDI GGCGCC 2 cut(s) 3400, 4330
SspI AATATT 2 cut(s) 2638, 3244
SstI GAGCTC 1 cut(s) 2376
StyD4I CCNGG 6 cut(s) 864, 1248, 2236, 2367, 2490, 3290
StyI CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3191, 3455
TaiI ACGT 6 cut(s) 1183, 2169, 2347, 2602, 4137, 4454
TaqI TCGA 6 cut(s) 2009, 2272, 2703, 3418, 3937, 4670
TaqII GACCGA 1 cut(s) 4259
TatI WGTACW 7 cut(s) 18, 837, 1088, 1256, 2312, 2815, 4641
TauI GCSGC 2 cut(s) 2789, 3727
TseFI GTSAC 6 cut(s) 943, 1656, 2494, 2874, 3795, 3885
Tsp45I GTSAC 6 cut(s) 943, 1656, 2494, 2874, 3795, 3885
TspGWI ACGGA 2 cut(s) 2738, 3831
Van91I CCANNNNNTGG 4 cut(s) 1865, 3068, 3461, 3862
Vha464I CTTAAG 1 cut(s) 3131
VneI GTGCAC 1 cut(s) 3609
VpaK11BI GGWCC 2 cut(s) 3071, 3464
VspI ATTAAT 1 cut(s) 561
XceI RCATGY 2 cut(s) 812, 2145
XcmI CCANNNNNNNNNTGG 2 cut(s) 872, 1448
XmaJI CCTAGG 1 cut(s) 3191
XmiI GTMKAC 4 cut(s) 1069, 2169, 3113, 4556
XmnI GAANNNNTTC 2 cut(s) 2690, 2829
ZrmI AGTACT 1 cut(s) 20
Zsp2I ATGCAT 2 cut(s) 752, 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.