Rh6AG186600
TCP Family

1-phosphatidylinositol-3-phosphate 5-kinase FAB1D

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
32904635 .. 32914055
9421 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG186600.1

Sequence Viewer

Length: 4284 bp
ATGTATAGTATGTGTCAGTACTGTGGTGCAGAATTGACACAACCTAAAGATGAAAAGAAGGAACATGATAATCTGAAAACCTTACCGTCAGATAGGGCTTGCAAAGCTTGTGCAGAAAAACAGGAGCGAGGATCTATCAAGCAGGCTAATGGAATGTCAAGGCCTACGATCAGTCCAATGACTTCCTTGTCAAGCAGTGATAGTTCTGTCTCCAACTGCAGTGAATTTTCTGTTGACGTCAACTCATATGATCGTACGGCAGGTATGAATAATGACCAGCTATGGGAACCCCCTTCTGCAGACACTTGTGGATCATCTAGCGAAACTGAGAATTCAAATTCTTCAGAAAGTGAAATGGCTGACTGGATATGGGATCCTCCTGAACCTGATGATCCGGAGGACGATGTGGAGGGTAGTGTGGCTTTCAATGACGACGACGATGATGAGTGTGGTGATGGCATGAAATGGGGCAAACCAAGTTCTTTGAGTCGCTCTAAAGATGAAGGAAGTGGGAGCTATAAGTTTAAAGAGGAAAAACAAAGAGCAATGGAAGCAGTTATTAATGGAAAGTTCAAGGCTCTTGTCAGTCAACTACTTACATCTGTTGGTGTTGTTGGATCTTCTGGGGAGGATGGTGAAAGTTGGGTGGACATTATTACTTCTTTGTCATGGGAAGCTGCTTCATTTTTGAAACCCGATGCTGTTGTTGGTAAAGCAATGGATATAGATGGCTATGTGAAAGTAAAATGCATTGCAACTGGTGATCGCTGCCAAAGTCAATTAGTAAAAGGTATGGTCTTCAAAAAGCATGCTGCACACAAGCATATGCCAATCAAGTACAAGAACCCAAGGTTGTTGCTAATCCAGGGAGTTCTTGGTCAGTCTTCAAGTGGATTGTCATCATTTGATTCCATGGAGCAGGAACAAGATTACTTGAAGTATGTCACCGAAATGCTAGAACTGTGTCATCCAAATGTGGTTTTAGTGGAAAAAACTGTGTCTCGGGATATTCAAGAGTCTATTCTCGCAAAAAGAATGACACTGGTCTATGACATGAAGCTCCATCGTCTACAGAGAATTGCTCTTTGTACTGGATCACCAATTTTATCATCAGATACAATGACGAGTCAAAAGCTAAAGCAGTGTGACTCTTTTCACATTGAAAAATTTATAGAGGAACGTGCTGGTTTGGGTGGAGGAAAGATGCCAAGTAAAACATTGATGTTTATTGAGGGCTGTCCTACACGCCAGGGTTGTACAATTTTGCTGAAAGGAGCACAGAGTGATGAATTGAAGAAGATCAAGTGTGTAGTGCAGTGTGCAGTTATCTTGGCATATCATTTAATACTTGAGACTTCTTTCCTTGTTGACCAGAGAGCAATGTTCTTTGCGCATCCTTTGTTTGGTGGAGCAAATCACTTGTCCAAGGAAGTAGCAAACCAGTTTTCCACTGGTAACAAATCCTTTAATTTAGCATCCAGTAATTCATGCATTCCACATCATAGGGAGTCTAGTGGTGAAACTGAGTCGGATGCAGTTGATATTCTCATTTCTGATGGATTCCATGAAGGATCTTCCCAAAATGCTGACTTGGAATTACAAGGCAGTTCCACATTATATGAACCATACAATCCTGTCATATTTTCTGGCTTCTCGTCACTTTCAGCTTCACTAAAGAAAGTTATAGGGGAAAGCCTGCCTCTAGCATCTACTTCTTATCAATCTCTCTCTTCATACTTTGGATTAAATGGAAGAGAACTGAATGGTCAGATTACAAAGTCTGTTTCTATTTCAACATCTCCAGAGGCGACTGATCAGTGTGATATTGAAGATAGAGGGAGTTCTGATGAAGAGAGGCCACTTAGTGGTGGAGAAATCCAGTCTCCATTTACTTGCACTGAAGCTTCTCTGGAGATTGAAAAGGATGGTGGCAACAATGAAGATCCAATGCAAAGCAAGAATGACATCAGCAAAGTGTTGGATTCCCAGAGTATTTTGGTTTTGATGTCGAGCAAGAATGTTAAAGGGAATGTTTGTGAGCAAAGCCATTTTTCTCATATCATGTTCTACAAGAATTTTGATGTGCCCATTGGAAAGTTTCTACAGGATAATATACTTAATCAGAGAAGCCACTGCACAGCATGTGGTGAGCTGCCAGAAGCTCACGTATACTGTTATGCACATCATAACAAGCAGCTTACCATACGCGTTAAACGGCTTCTTACAGAGCATTTACCTGGTGAAGCAGAAGGCAAGCTTTGGATGTGGAGTCGATGCGGTAAATGTAAATCTGTGAAGGGAAAATCAAAGTGTACCAAAAGAGTCTTGATTTCCAGTGCTGCACGTTGTCTGTCATTTGGAAATTTCCTGGAGCTCAGTTTCTCAAATCACTCTCTGTCTAATATATTTTCTAGCTGCGGCCATTCTTTGCAAATGGACTTTCTCTACTTCTTTGGATTAGGCCCCATGGTTGCTATGTTCAAAAACTCCCCGGTCACAATTTATACTGTGTCTGTGCCTCCTCTAAAACTTCCATGCAGCAATTCAATTAGGCAAGAGTGGTTTGCAAAAGAAATTGAGAATGTATTAGCGAAAGGACGTATGCTGTTAAGTGAGGTTGGCAATTCTTTGAAGAATATTAGGTCTCAGTTTGATGGCATGACTTTGAAACTGCAAGGCTCCTTGAAAAAATTCTCTGACATCGAAGATATGCTATGTCAAGAAGAATCTGAGCGAGAGGTCACTTTTCTATTTGTAAACATCCGTAATGCTGTTAACGAGAATAGGAACTCAGACCAAGCCGCTTACAAACTTCTTGGCTTTAACCGTGTACATTGGGAACTTCTTCTTCAATCATGCGTTTGGGATCAGCGCTTGCACTCGTTACTGTCACCAACTCCTATGATGATCCATTCCATAGCTTCTGATAAGGTAAGCCAAGAAGTGAATTCAGGTATTCATGGCACTGCTGACAGTATTATGGGAAGGGGTGAAAACTGCATTGATGGTTCTTCCAATTTAAAAGTTGAGTTAAATATAGCTGCAAAAGCAGATGAATTTCCAATTAAAGAAATTCCAATTGGTGGTCCTGTTGAAGAATCTGAAGGAGCTGATCAACATAACGAGTCTACTTTGCCTGAGGGTCTTAAGACACCAAATGTGGGTGGTGCAAGGCCAAAAAGAGTTGCTGACCACAAGTCCAATCCTAGGCCCAATGGATCCACTGATGGTCATTCTGACAAGTATGTTGAAGGGAATATTACTTTCGCTGATGAACTAGATGAAGATAGAGGAATTCCTGTTTCCAGGGAAAATGAGGATCCTTGTTCAGTTGTTGATTCAAATCTATCACTGATGGGCGCTTCTCCGCACTCACGATCATCCAAGTTTGACAGTTCAAGTGATTGGTTTTGGGCGCCCTTCTCTGAAATTCGACACGTAGGTATGAAGGATCTACAAAGAGTCCTTCCAAGGTTTGGACCCATGAGTAGCTATACATCAGAATACTTACCCACAGCATATCAGTTGATCACAGAGGAAGGGCAAATGTTGCACATTCCTCTAGGAACTGATAATTATATAGTGTCGGACTATGATGGTGAACTTTCAAGTGTGATTGCTTGTGCACTGGCCTTTTTGAAAGATCCACATCTTCAAACAGATCTTGTTGATGACGAGTGTGGAATTGCTGCTAGAACATTTGAGAGTTTACAGAGTCTGGCTCGGGTTCCTTCGCCGCATCAAAGCTCAAATGGTTCTTCAGATTCTGATTCAGTCCATTCTATGGCAAGCATTTCTTTTGATGAGTCACGCTTCTCCAGTTTTGACGGATTGAACTTGTTGGATTCTCTGGTTCCGGCAGGAACCCACCCAATGGTAACTCTAAGAGTTGCCAAGTCACTTGGCAAGGAGAAATATACTGTATTATGTCCATATGCCAATCAGTTTCGAGACCTCCGGAATCATTGCTGCCAGTCTGAGGTTGATTATATTGCTTCCCTAAGCCGTTGTAGAAACTGGGATGCTAAAGGTGGGAAGAGCAAAGCCTTTTTTGCCAAAACAGTTGATGACAGGTTGATTATAAAAGAAATCAAGAAGACAGAATTTGAGTCATTTGTAAAGTTTGCAGATGCTTATTTTGAGCACGTGAACAAGTCATTTGAGAAGGGAAATCAAACTTGCCTTGCAAAAATTCTTGGGATTTATCAGGTTGGTAGATTTTTGGTTTCCATCATTAAACCTGTTTCTTCATACTCACAACTTTTTCTTTGCAGGTGGTTGTGA

Protein Analysis

1427

Amino Acids

157.72

Weight (kDa)

5.47

Isoelectric Point (pI)

49.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cpn60_TCP1 PF00118 211 - 450 2e-20 TCP-1/cpn60 chaperonin family
PIP5K PF01504 1343 - 1404 7.7e-10 Phosphatidylinositol-4-phosphate 5-Kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4082
AarI CACCTGC 1 cut(s) 4263
AasI GACNNNNNNGTC 1 cut(s) 187
AatII GACGTC 1 cut(s) 240
Acc16I TGCGCA 1 cut(s) 1392
Acc36I ACCTGC 2 cut(s) 251, 4263
AccB1I GGYRCC 1 cut(s) 3415
AccB7I CCANNNNNTGG 5 cut(s) 1865, 3083, 3476, 3784, 3874
AccI GTMKAC 3 cut(s) 1069, 2169, 3128
AccII CGCG 1 cut(s) 2208
AccIII TCCGGA 2 cut(s) 394, 3957
AciI CCGC 5 cut(s) 2277, 2418, 2802, 3368, 3737
AcoI YGGCCR 1 cut(s) 2419
AcuI CTGAAG 4 cut(s) 327, 1920, 3123, 3744
AcvI CACGTG 1 cut(s) 4147
AcyI GRCGYC 2 cut(s) 237, 3416
AdeI CACNNNGTG 2 cut(s) 1283, 1865
AfaI GTAC 7 cut(s) 20, 256, 839, 1090, 1258, 2314, 2832
AfeI AGCGCT 1 cut(s) 2873
AflII CTTAAG 1 cut(s) 3146
AflIII ACRYGT 2 cut(s) 2206, 3436
AhdI GACNNNNNGTC 1 cut(s) 3196
AjnI CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3305
AjuI GAANNNNNNNTTGG 2 cut(s) 3063, 3095
Alw21I GWGCWC 4 cut(s) 1279, 2376, 3628, 4146
Alw26I GTCTC 6 cut(s) 214, 1005, 1346, 1887, 2649, 3945
Alw44I GTGCAC 1 cut(s) 3624
AlwNI CAGNNNCTG 2 cut(s) 3718, 3767
Ama87I CYCGRG 2 cut(s) 1002, 3723
Aor13HI TCCGGA 2 cut(s) 394, 3957
Aor51HI AGCGCT 1 cut(s) 2873
AoxI GGCC 7 cut(s) 161, 1856, 2419, 2461, 3173, 3209, 3630
ApaLI GTGCAC 1 cut(s) 3624
ArsI GACNNNNNNTTYG 2 cut(s) 1406, 1438
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 2 cut(s) 2690, 2844
AspA2I CCTAGG 1 cut(s) 3206
AspLEI GCGC 4 cut(s) 1393, 2874, 3362, 3418
AspS9I GGNCC 4 cut(s) 2462, 3086, 3210, 3479
AsuC2I CCSGG 1 cut(s) 2492
AvaI CYCGRG 2 cut(s) 1002, 3723
AvaII GGWCC 2 cut(s) 3086, 3479
AvrII CCTAGG 1 cut(s) 3206
AxyI CCTNAGG 1 cut(s) 3138
BaeGI GKGCMC 2 cut(s) 2088, 3628
BamHI GGATCC 3 cut(s) 373, 3218, 3319
BanI GGYRCC 1 cut(s) 3415
BanII GRGCYC 1 cut(s) 2376
BbrPI CACGTG 1 cut(s) 4147
BbsI GAAGAC 3 cut(s) 790, 876, 4103
Bbv12I GWGCWC 4 cut(s) 1279, 2376, 3628, 4146
BceAI ACGGC 3 cut(s) 273, 2231, 3990
BciT130I CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3307
BclI TGATCA 3 cut(s) 1813, 3112, 3528
BcnI CCSGG 1 cut(s) 2492
BcoDI GTCTC 6 cut(s) 214, 1005, 1346, 1887, 2649, 3945
BfaI CTAG 9 cut(s) 318, 956, 1512, 1703, 2412, 3207, 3278, 3563, 3693
BfmI CTRYAG 4 cut(s) 217, 297, 1070, 2102
BfoI RGCGCY 3 cut(s) 2875, 3363, 3419
BfrI CTTAAG 1 cut(s) 3146
BfuAI ACCTGC 2 cut(s) 251, 4263
BglII AGATCT 1 cut(s) 3661
BlnI CCTAGG 1 cut(s) 3206
BmcAI AGTACT 1 cut(s) 20
Bme1390I CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3307
Bme18I GGWCC 2 cut(s) 3086, 3479
BmeRI GACNNNNNGTC 1 cut(s) 3196
BmeT110I CYCGRG 2 cut(s) 1002, 3723
BmgT120I GGNCC 4 cut(s) 2462, 3086, 3210, 3479
BmrFI CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3307
BmrI ACTGGG 1 cut(s) 4027
BmuI ACTGGG 1 cut(s) 4027
BoxI GACNNNNGTC 1 cut(s) 1043
BpiI GAAGAC 3 cut(s) 790, 876, 4103
BplI GAGNNNNNCTC 4 cut(s) 1066, 1098, 3706, 3738
BpmI CTGGAG 4 cut(s) 1785, 1931, 2390, 3802
Bpu10I CCTNAGC 1 cut(s) 4001
BpuEI CTTGAG 1 cut(s) 1370
BpuMI CCSGG 1 cut(s) 2492
BsaAI YACGTR 3 cut(s) 2167, 3439, 4147
BsaBI GATNNNNATC 3 cut(s) 898, 3342, 3648
BsaHI GRCGYC 2 cut(s) 237, 3416
BsaI GGTCTC 2 cut(s) 2649, 3945
BsaWI WCCGGW 2 cut(s) 394, 3957
Bse21I CCTNAGG 1 cut(s) 3138
Bse3DI GCAATG 5 cut(s) 552, 723, 750, 1386, 3964
Bse8I GATNNNNATC 3 cut(s) 898, 3342, 3648
BseAI TCCGGA 2 cut(s) 394, 3957
BseBI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3307
BseJI GATNNNNATC 3 cut(s) 898, 3342, 3648
BseMI GCAATG 5 cut(s) 552, 723, 750, 1386, 3964
BseMII CTCAG 8 cut(s) 318, 1515, 2389, 2660, 2721, 2805, 3129, 3969
BseRI GAGGAG 1 cut(s) 2511
BseSI GKGCMC 2 cut(s) 2088, 3628
BsgI GTGCAG 7 cut(s) 48, 132, 798, 1334, 1341, 2119, 2325
Bsh1236I CGCG 1 cut(s) 2208
BshFI GGCC 7 cut(s) 163, 1858, 2421, 2463, 3175, 3211, 3632
BshNI GGYRCC 1 cut(s) 3415
BsiHKAI GWGCWC 4 cut(s) 1279, 2376, 3628, 4146
BsiHKCI CYCGRG 2 cut(s) 1002, 3723
BsiSI CCGG 4 cut(s) 395, 2492, 3857, 3958
BsiWI CGTACG 1 cut(s) 254
BsmAI GTCTC 6 cut(s) 214, 1005, 1346, 1887, 2649, 3945
BsmI GAATGC 1 cut(s) 1491
BsnI GGCC 7 cut(s) 163, 1858, 2421, 2463, 3175, 3211, 3632
Bso31I GGTCTC 2 cut(s) 2649, 3945
BsoBI CYCGRG 2 cut(s) 1002, 3723
Bsp1286I GDGCHC 5 cut(s) 1279, 2088, 2376, 3628, 4146
Bsp13I TCCGGA 2 cut(s) 394, 3957
Bsp1407I TGTACA 2 cut(s) 1256, 2830
Bsp19I CCATGG 2 cut(s) 912, 2466
BspACI CCGC 5 cut(s) 2277, 2418, 2802, 3368, 3737
BspANI GGCC 7 cut(s) 163, 1858, 2421, 2463, 3175, 3211, 3632
BspCNI CTCAG 8 cut(s) 319, 1516, 2388, 2659, 2722, 2804, 3130, 3970
BspEI TCCGGA 2 cut(s) 394, 3957
BspFNI CGCG 1 cut(s) 2208
BspMAI CTGCAG 2 cut(s) 221, 301
BspMI ACCTGC 2 cut(s) 251, 4263
BspQI GCTCTTC 1 cut(s) 4031
BspT107I GGYRCC 1 cut(s) 3415
BspTI CTTAAG 1 cut(s) 3146
BspTNI GGTCTC 2 cut(s) 2649, 3945
BsrDI GCAATG 5 cut(s) 552, 723, 750, 1386, 3964
BsrGI TGTACA 2 cut(s) 1256, 2830
BssNAI GTATAC 1 cut(s) 2170
BssNI GRCGYC 2 cut(s) 237, 3416
BssT1I CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3206, 3470
Bst1107I GTATAC 1 cut(s) 2170
Bst2UI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3307
Bst6I CTCTTC 4 cut(s) 1735, 1747, 1845, 4031
BstACI GRCGYC 2 cut(s) 237, 3416
BstAFI CTTAAG 1 cut(s) 3146
BstAPI GCANNNNNTGC 1 cut(s) 3550
BstAUI TGTACA 2 cut(s) 1256, 2830
BstBAI YACGTR 3 cut(s) 2167, 3439, 4147
BstC8I GCNNGC 7 cut(s) 100, 144, 810, 1697, 2255, 2876, 3790
BstDSI CCRYGG 2 cut(s) 912, 2466
BstFNI CGCG 1 cut(s) 2208
BstH2I RGCGCY 3 cut(s) 2875, 3363, 3419
BstHHI GCGC 4 cut(s) 1393, 2874, 3362, 3418
BstMAI GTCTC 6 cut(s) 214, 1005, 1346, 1887, 2649, 3945
BstMWI GCNNNNNNNGC 5 cut(s) 104, 551, 3047, 3550, 4052
BstNI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3307
BstNSI RCATGY 2 cut(s) 812, 2145
BstPAI GACNNNNGTC 1 cut(s) 1043
BstSCI CCNGG 6 cut(s) 864, 1248, 2236, 2367, 2490, 3305
BstSFI CTRYAG 4 cut(s) 217, 297, 1070, 2102
BstSLI GKGCMC 2 cut(s) 2088, 3628
BstUI CGCG 1 cut(s) 2208
BstV2I GAAGAC 3 cut(s) 790, 876, 4103
BstZ17I GTATAC 1 cut(s) 2170
Bsu36I CCTNAGG 1 cut(s) 3138
BsuRI GGCC 7 cut(s) 163, 1858, 2421, 2463, 3175, 3211, 3632
BtgI CCRYGG 2 cut(s) 912, 2466
BtsI GCAGTG 6 cut(s) 202, 226, 1148, 1322, 2131, 2964
BveI ACCTGC 2 cut(s) 251, 4263
Cac8I GCNNGC 7 cut(s) 100, 144, 810, 1697, 2255, 2876, 3790
CaiI CAGNNNCTG 2 cut(s) 3718, 3767
CfoI GCGC 4 cut(s) 1393, 2874, 3362, 3418
Cfr13I GGNCC 4 cut(s) 2462, 3086, 3210, 3479
CsiI ACCWGGT 1 cut(s) 2236
Csp6I GTAC 7 cut(s) 19, 255, 838, 1089, 1257, 2313, 2831
CviQI GTAC 7 cut(s) 19, 255, 838, 1089, 1257, 2313, 2831
DinI GGCGCC 1 cut(s) 3417
DraI TTTAAA 2 cut(s) 526, 3021
DraIII CACNNNGTG 2 cut(s) 1283, 1865
DrdI GACNNNNNNGTC 1 cut(s) 187
DriI GACNNNNNGTC 1 cut(s) 3196
DseDI GACNNNNNNGTC 1 cut(s) 187
EaeI YGGCCR 1 cut(s) 2419
Eam1104I CTCTTC 4 cut(s) 1735, 1747, 1845, 4031
Eam1105I GACNNNNNGTC 1 cut(s) 3196
EarI CTCTTC 4 cut(s) 1735, 1747, 1845, 4031
Ecl136II GAGCTC 1 cut(s) 2374
Eco130I CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3206, 3470
Eco147I AGGCCT 1 cut(s) 163
Eco24I GRGCYC 1 cut(s) 2376
Eco31I GGTCTC 2 cut(s) 2649, 3945
Eco47I GGWCC 2 cut(s) 3086, 3479
Eco47III AGCGCT 1 cut(s) 2873
Eco53kI GAGCTC 1 cut(s) 2374
Eco57I CTGAAG 4 cut(s) 327, 1920, 3123, 3744
Eco72I CACGTG 1 cut(s) 4147
Eco81I CCTNAGG 1 cut(s) 3138
Eco88I CYCGRG 2 cut(s) 1002, 3723
EcoICRI GAGCTC 1 cut(s) 2374
EcoO109I RGGNCCY 1 cut(s) 2462
EcoRI GAATTC 3 cut(s) 331, 2947, 3294
EcoRII CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3305
EcoT14I CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3206, 3470
EcoT22I ATGCAT 2 cut(s) 752, 1493
EcoT38I GRGCYC 1 cut(s) 2376
EgeI GGCGCC 1 cut(s) 3417
EheI GGCGCC 1 cut(s) 3417
ErhI CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3206, 3470
FalI AAGNNNNNCTT 4 cut(s) 2241, 2273, 3781, 3813
FauNDI CATATG 3 cut(s) 247, 825, 3934
FbaI TGATCA 3 cut(s) 1813, 3112, 3528
FblI GTMKAC 3 cut(s) 1069, 2169, 3128
FriOI GRGCYC 1 cut(s) 2376
FspBI CTAG 9 cut(s) 318, 956, 1512, 1703, 2412, 3207, 3278, 3563, 3693
FspI TGCGCA 1 cut(s) 1392
GlaI GCGC 4 cut(s) 1392, 2873, 3361, 3417
GsuI CTGGAG 4 cut(s) 1785, 1931, 2390, 3802
HaeII RGCGCY 3 cut(s) 2875, 3363, 3419
HaeIII GGCC 7 cut(s) 163, 1858, 2421, 2463, 3175, 3211, 3632
HapII CCGG 4 cut(s) 395, 2492, 3857, 3958
HhaI GCGC 4 cut(s) 1393, 2874, 3362, 3418
Hin1I GRCGYC 2 cut(s) 237, 3416
Hin6I GCGC 4 cut(s) 1391, 2872, 3360, 3416
HinP1I GCGC 4 cut(s) 1391, 2872, 3360, 3416
HincII GTYRAC 5 cut(s) 235, 241, 590, 1369, 2776
HindII GTYRAC 5 cut(s) 235, 241, 590, 1369, 2776
HindIII AAGCTT 3 cut(s) 105, 1902, 2255
HpaI GTTAAC 1 cut(s) 2776
HpaII CCGG 4 cut(s) 395, 2492, 3857, 3958
Hpy99I CGWCG 2 cut(s) 437, 440
HpyCH4IV ACGT 7 cut(s) 237, 1180, 2166, 2344, 2599, 3438, 4146
HpyF10VI GCNNNNNNNGC 5 cut(s) 104, 551, 3047, 3550, 4052
HpySE526I ACGT 7 cut(s) 237, 1180, 2166, 2344, 2599, 3438, 4146
Hsp92I GRCGYC 2 cut(s) 237, 3416
HspAI GCGC 4 cut(s) 1391, 2872, 3360, 3416
KasI GGCGCC 1 cut(s) 3415
Kpn2I TCCGGA 2 cut(s) 394, 3957
Ksp22I TGATCA 3 cut(s) 1813, 3112, 3528
KspAI GTTAAC 1 cut(s) 2776
LguI GCTCTTC 1 cut(s) 4031
LmnI GCTCC 9 cut(s) 124, 513, 916, 1065, 1274, 1409, 2371, 2684, 3107
MabI ACCWGGT 1 cut(s) 2236
MaeI CTAG 9 cut(s) 318, 956, 1512, 1703, 2412, 3207, 3278, 3563, 3693
MaeII ACGT 7 cut(s) 237, 1180, 2166, 2344, 2599, 3438, 4146
MfeI CAATTG 1 cut(s) 3078
MhlI GDGCHC 5 cut(s) 1279, 2088, 2376, 3628, 4146
MluI ACGCGT 1 cut(s) 2206
Mly113I GGCGCC 1 cut(s) 3416
MmeI TCCRAC 6 cut(s) 237, 595, 1509, 1959, 3567, 3822
Mph1103I ATGCAT 2 cut(s) 752, 1493
MroI TCCGGA 2 cut(s) 394, 3957
MroXI GAANNNNTTC 2 cut(s) 2690, 2844
MslI CAYNNNNRTG 2 cut(s) 950, 972
MspCI CTTAAG 1 cut(s) 3146
MspI CCGG 4 cut(s) 395, 2492, 3857, 3958
MspR9I CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3307
MunI CAATTG 1 cut(s) 3078
Mva1269I GAATGC 1 cut(s) 1491
MvaI CCWGG 5 cut(s) 866, 1250, 2238, 2369, 3307
MvnI CGCG 1 cut(s) 2208
MwoI GCNNNNNNNGC 5 cut(s) 104, 551, 3047, 3550, 4052
NarI GGCGCC 1 cut(s) 3416
NciI CCSGG 1 cut(s) 2492
NcoI CCATGG 2 cut(s) 912, 2466
NdeI CATATG 3 cut(s) 247, 825, 3934
NmuCI GTSAC 8 cut(s) 943, 1145, 1656, 2494, 2740, 2889, 3807, 3897
NsbI TGCGCA 1 cut(s) 1392
NsiI ATGCAT 2 cut(s) 752, 1493
NspI RCATGY 2 cut(s) 812, 2145
PaeI GCATGC 1 cut(s) 812
PaqCI CACCTGC 1 cut(s) 4263
PceI AGGCCT 1 cut(s) 163
PciSI GCTCTTC 1 cut(s) 4031
PctI GAATGC 1 cut(s) 1491
PdmI GAANNNNTTC 2 cut(s) 2690, 2844
Pfl23II CGTACG 1 cut(s) 254
PflMI CCANNNNNTGG 5 cut(s) 1865, 3083, 3476, 3784, 3874
PfoI TCCNGGA 1 cut(s) 2367
PluTI GGCGCC 1 cut(s) 3419
PmaCI CACGTG 1 cut(s) 4147
PmlI CACGTG 1 cut(s) 4147
Ppu21I YACGTR 3 cut(s) 2167, 3439, 4147
PshAI GACNNNNGTC 1 cut(s) 1043
PshBI ATTAAT 1 cut(s) 561
PsiI TTATAA 1 cut(s) 4082
Psp124BI GAGCTC 1 cut(s) 2376
Psp6I CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3305
PspCI CACGTG 1 cut(s) 4147
PspGI CCWGG 5 cut(s) 864, 1248, 2236, 2367, 3305
PspLI CGTACG 1 cut(s) 254
PspPI GGNCC 4 cut(s) 2462, 3086, 3210, 3479
PstI CTGCAG 2 cut(s) 221, 301
PstNI CAGNNNCTG 2 cut(s) 3718, 3767
RsaI GTAC 7 cut(s) 20, 256, 839, 1090, 1258, 2314, 2832
RsaNI GTAC 7 cut(s) 19, 255, 838, 1089, 1257, 2313, 2831
RseI CAYNNNNRTG 2 cut(s) 950, 972
SacI GAGCTC 1 cut(s) 2376
SapI GCTCTTC 1 cut(s) 4031
Sau96I GGNCC 4 cut(s) 2462, 3086, 3210, 3479
ScaI AGTACT 1 cut(s) 20
ScrFI CCNGG 6 cut(s) 866, 1250, 2238, 2369, 2492, 3307
SduI GDGCHC 5 cut(s) 1279, 2088, 2376, 3628, 4146
SexAI ACCWGGT 1 cut(s) 2236
SfcI CTRYAG 4 cut(s) 217, 297, 1070, 2102
SfoI GGCGCC 1 cut(s) 3417
SinI GGWCC 2 cut(s) 3086, 3479
SmiMI CAYNNNNRTG 2 cut(s) 950, 972
SmlI CTYRAG 2 cut(s) 1349, 3146
SmoI CTYRAG 2 cut(s) 1349, 3146
SphI GCATGC 1 cut(s) 812
SseBI AGGCCT 1 cut(s) 163
SsiI CCGC 5 cut(s) 2277, 2418, 2802, 3368, 3737
SspDI GGCGCC 1 cut(s) 3415
SspI AATATT 2 cut(s) 2638, 3259
SspMI CTAG 9 cut(s) 318, 956, 1512, 1703, 2412, 3207, 3278, 3563, 3693
SstI GAGCTC 1 cut(s) 2376
StuI AGGCCT 1 cut(s) 163
StyD4I CCNGG 6 cut(s) 864, 1248, 2236, 2367, 2490, 3305
StyI CCWWGG 6 cut(s) 848, 912, 1425, 2466, 3206, 3470
TaiI ACGT 7 cut(s) 240, 1183, 2169, 2347, 2602, 3441, 4149
TaqI TCGA 5 cut(s) 2009, 2272, 2703, 3433, 3949
TatI WGTACW 5 cut(s) 18, 837, 1088, 1256, 2830
TauI GCSGC 3 cut(s) 2421, 2804, 3739
TseFI GTSAC 8 cut(s) 943, 1145, 1656, 2494, 2740, 2889, 3807, 3897
Tsp45I GTSAC 8 cut(s) 943, 1145, 1656, 2494, 2740, 2889, 3807, 3897
TspGWI ACGGA 2 cut(s) 2753, 3843
Van91I CCANNNNNTGG 5 cut(s) 1865, 3083, 3476, 3784, 3874
Vha464I CTTAAG 1 cut(s) 3146
VneI GTGCAC 1 cut(s) 3624
VpaK11BI GGWCC 2 cut(s) 3086, 3479
VspI ATTAAT 1 cut(s) 561
XceI RCATGY 2 cut(s) 812, 2145
XcmI CCANNNNNNNNNTGG 2 cut(s) 872, 1448
XmaJI CCTAGG 1 cut(s) 3206
XmiI GTMKAC 3 cut(s) 1069, 2169, 3128
XmnI GAANNNNTTC 2 cut(s) 2690, 2844
XspI CTAG 9 cut(s) 318, 956, 1512, 1703, 2412, 3207, 3278, 3563, 3693
ZraI GACGTC 1 cut(s) 238
ZrmI AGTACT 1 cut(s) 20
Zsp2I ATGCAT 2 cut(s) 752, 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.