pycom05g11710

Arabidopsis phospholipase-like protein (PEARLI 4)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
15292995 .. 15296085
3091 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g11710.3

Sequence Viewer

Length: 1584 bp
ATGTCTCTGATCGGAAAAATACACCCCGAATGTGTTGATGTAGTCAATCCCTACCATGAATGCACTGAAATTTGCCTGAGAAAGATTGCTGAAGGGAAGGGCCGAAGGGTGACGAAAAAGAAATCAGGTTTTGGCAGCAGTTTTAAATATGGTGAGCACAAAAAAAGGGGGGCTGAAGAGAAAAGAGCATCCAATCCTTACCATGACCCTGAATTCTTCCGCCAAAGAGCTGTTGGTGCCGAACCTCGTGGGGGCAAAAAAGAATCAGGTTCAATAGTTGATATTCCTATATTGGGCAAACAAAAGGAGGGATCCCGACCAAAGACCCCTCAGGAGCTTGTCCAAAGTGTGATTTATCATTTAGATGCTCAGTCATCTCCATCAAAGGAAAATGTGAGATTAGAGAACGGCTGTGTCCTTGATGATCCTATACTCGGCGGAAGGAAGCAGGGATCTCAGCCAAAGCCCTCTGAAGAGCTTAAGAATGCAACTGGTCGAGGTGTAATTTATCCCTCTGATTCTCGATCTGAAGAAATAGTGCAAGTAGAAAATGGCTCCGTGTTTGATGATCCTATATTTGGCAGACAAAGGCCTGGTTCCAGACCAAAGCGCCCTGAAGAGCTTGACAATGTATATGGTGAAATTAAGGAAGAGGTTAAAATAGGGAATGGTGAGCATAAATCTTATTCTCCACCGTCTGCTGAAGTAAAAGATGCTTCATTCAACAAGGATCAAGTTCCGTCTTCTCTATTAGTGCCACCATCTGGAATTATCACAATGCCTCAAAATCCCAAACACCCTCGAGAGAATGGTGCTACCTACGTCGCTAGTGAACCACCCAGTAATGGGGAAGACAAGGAAAATATTAATCATTCACCTGGAGTTGATTCAAATCATACTGTCAGCAATGTAGGAGAAGGCTCTACTGGATCAGCTTTCGACTCAAGATTTAGTTTCTCAGGTACTGTCCATGCTTTTGAAGATAGTGATGATGACGATACACGATCTGTTATTTCTGATGCCAGTGTCTCTGTGGGAAAATACCGTGTGAAAGGAAGTTTCTCTTCCCTTCTCCAGTCAATCATGGAAAAATATGGTGATATAGCCGCAAGCTGTCAATTGGAATCAGTTGCCATGCGCTCTTATTATCTCGAGTGTGTATGTTATATAGTCCAAGAGTTGAAGCGAACGCCGATTAAGGAGCTGACAAAGCCTAAAGTCACACAAATGTTATCTATGGTTAAGGATGTAGAATCTTCGGGAATGGATGTTGGTTGGCTCCGCTTTCTGATCAACGAATGTGCAGAATCCATTGAACTCCTCGCTCAGCATCGAGCATTCGAAGTAGCAAAGGCAAACTGCGACCGTGATTTAGAATCCACAAGGAAAGAACTTGAACCGCAAATTGAGGCTCTGGTTCTGAAAGAAAAGGAGGTTGTCAATGCCAAGAAGCAAGTTGCTGAAATGAAAGCCCTCCTGCGGGAGCTCGAGCTTAAATCTTCCGTCTTGAGCGACAGTGTTAGTAACATGAAGTCCAAGGTCGAAAATCTTCCGAGTAAACCGTTGTTGGACAAAGTCTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

528

Amino Acids

58.16

Weight (kDa)

6.21

Isoelectric Point (pI)

49.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 236
AccB7I CCANNNNNTGG 1 cut(s) 764
AciI CCGC 6 cut(s) 220, 438, 1107, 1282, 1400, 1480
AclWI GGATC 7 cut(s) 306, 319, 419, 460, 563, 738, 937
AcsI RAATTY 2 cut(s) 69, 212
AcuI CTGAAG 6 cut(s) 111, 195, 492, 549, 636, 723
AfaI GTAC 1 cut(s) 964
AfiI CCNNNNNNNGG 9 cut(s) 251, 293, 434, 578, 764, 845, 846, 1479, 1480
AflII CTTAAG 1 cut(s) 479
AgsI TTSAA 7 cut(s) 273, 724, 891, 980, 1183, 1316, 1397
AjnI CCWGG 2 cut(s) 592, 877
AluBI AGCT 9 cut(s) 230, 337, 478, 622, 935, 1113, 1204, 1486, 1492
AluI AGCT 9 cut(s) 230, 337, 478, 622, 935, 1113, 1204, 1486, 1492
Alw21I GWGCWC 2 cut(s) 159, 1488
Alw26I GTCTC 2 cut(s) 9, 1033
AlwI GGATC 7 cut(s) 306, 319, 419, 460, 563, 738, 937
AlwNI CAGNNNCTG 1 cut(s) 965
Ama87I CYCGRG 3 cut(s) 801, 1151, 1487
AoxI GGCC 2 cut(s) 100, 590
ApeKI GCWGC 1 cut(s) 135
ApoI RAATTY 2 cut(s) 69, 212
AseI ATTAAT 1 cut(s) 867
Asp700I GAANNNNTTC 1 cut(s) 1548
AspLEI GCGC 2 cut(s) 612, 1140
AspS9I GGNCC 1 cut(s) 100
AsuHPI GGTGA 6 cut(s) 121, 164, 650, 683, 867, 1109
AsuII TTCGAA 1 cut(s) 1341
AvaI CYCGRG 3 cut(s) 801, 1151, 1487
AxyI CCTNAGG 1 cut(s) 330
BamHI GGATCC 1 cut(s) 311
BanI GGYRCC 1 cut(s) 236
BanII GRGCYC 1 cut(s) 1488
BauI CACGAG 1 cut(s) 246
BbsI GAAGAC 2 cut(s) 735, 858
Bbv12I GWGCWC 2 cut(s) 159, 1488
BbvI GCAGC 1 cut(s) 147
BccI CCATC 2 cut(s) 388, 769
BceAI ACGGC 1 cut(s) 424
BciT130I CCWGG 2 cut(s) 594, 879
BclI TGATCA 1 cut(s) 1290
BcoDI GTCTC 2 cut(s) 9, 1033
BfaI CTAG 1 cut(s) 828
BfoI RGCGCY 1 cut(s) 613
BfrI CTTAAG 1 cut(s) 479
BisI GCNGC 2 cut(s) 136, 1107
BlpI GCTNAGC 1 cut(s) 1326
BlsI GCNGC 2 cut(s) 137, 1108
Bme1390I CCNGG 2 cut(s) 594, 879
BmeT110I CYCGRG 3 cut(s) 801, 1151, 1487
BmgT120I GGNCC 1 cut(s) 100
BmiI GGNNCC 5 cut(s) 238, 313, 556, 598, 1280
BmrFI CCNGG 2 cut(s) 594, 879
BmrI ACTGGG 1 cut(s) 834
BmsI GCATC 5 cut(s) 197, 355, 703, 1009, 1339
BmuI ACTGGG 1 cut(s) 834
BpiI GAAGAC 2 cut(s) 735, 858
BpmI CTGGAG 2 cut(s) 900, 1058
Bpu1102I GCTNAGC 1 cut(s) 1326
Bpu14I TTCGAA 1 cut(s) 1341
BpuEI CTTGAG 2 cut(s) 928, 1528
BsaBI GATNNNNATC 1 cut(s) 891
BsaJI CCNNGG 1 cut(s) 1536
Bsc4I CCNNNNNNNGG 9 cut(s) 251, 293, 434, 578, 764, 845, 846, 1479, 1480
Bse1I ACTGG 5 cut(s) 496, 840, 931, 1023, 1075
Bse21I CCTNAGG 1 cut(s) 330
Bse3DI GCAATG 1 cut(s) 913
Bse8I GATNNNNATC 1 cut(s) 891
BseBI CCWGG 2 cut(s) 594, 879
BseDI CCNNGG 1 cut(s) 1536
BseGI GGATG 3 cut(s) 188, 1252, 1273
BseJI GATNNNNATC 1 cut(s) 891
BseLI CCNNNNNNNGG 9 cut(s) 251, 293, 434, 578, 764, 845, 846, 1479, 1480
BseMI GCAATG 1 cut(s) 913
BseMII CTCAG 6 cut(s) 68, 344, 383, 470, 972, 1340
BseNI ACTGG 5 cut(s) 496, 840, 931, 1023, 1075
BseRI GAGGAG 1 cut(s) 1310
BseXI GCAGC 1 cut(s) 147
BsgI GTGCAG 1 cut(s) 1323
Bsh1285I CGRYCG 1 cut(s) 1366
BshFI GGCC 2 cut(s) 102, 592
BshNI GGYRCC 1 cut(s) 236
BsiEI CGRYCG 1 cut(s) 1366
BsiHKAI GWGCWC 2 cut(s) 159, 1488
BsiHKCI CYCGRG 3 cut(s) 801, 1151, 1487
BslI CCNNNNNNNGG 9 cut(s) 251, 293, 434, 578, 764, 845, 846, 1479, 1480
BsmAI GTCTC 2 cut(s) 9, 1033
BsmI GAATGC 3 cut(s) 65, 490, 1337
BsnI GGCC 2 cut(s) 102, 592
BsoBI CYCGRG 3 cut(s) 801, 1151, 1487
Bsp119I TTCGAA 1 cut(s) 1341
Bsp1286I GDGCHC 2 cut(s) 159, 1488
Bsp1720I GCTNAGC 1 cut(s) 1326
BspACI CCGC 6 cut(s) 220, 438, 1107, 1282, 1400, 1480
BspANI GGCC 2 cut(s) 102, 592
BspCNI CTCAG 6 cut(s) 69, 343, 382, 469, 971, 1339
BspLI GGNNCC 5 cut(s) 238, 313, 556, 598, 1280
BspPI GGATC 7 cut(s) 306, 319, 419, 460, 563, 738, 937
BspQI GCTCTTC 2 cut(s) 468, 612
BspT104I TTCGAA 1 cut(s) 1341
BspT107I GGYRCC 1 cut(s) 236
BspTI CTTAAG 1 cut(s) 479
BsrDI GCAATG 1 cut(s) 913
BsrI ACTGG 5 cut(s) 496, 840, 931, 1023, 1075
BssECI CCNNGG 1 cut(s) 1536
BssSI CACGAG 1 cut(s) 246
BssT1I CCWWGG 1 cut(s) 1536
Bst2BI CACGAG 1 cut(s) 246
Bst2UI CCWGG 2 cut(s) 594, 879
Bst4CI ACNGT 7 cut(s) 696, 901, 967, 1046, 1367, 1517, 1563
Bst6I CTCTTC 5 cut(s) 171, 468, 612, 645, 1069
BstAFI CTTAAG 1 cut(s) 479
BstBI TTCGAA 1 cut(s) 1341
BstC8I GCNNGC 1 cut(s) 1111
BstDEI CTNAG 6 cut(s) 77, 330, 369, 456, 958, 1326
BstF5I GGATG 3 cut(s) 188, 1252, 1273
BstH2I RGCGCY 1 cut(s) 613
BstHHI GCGC 2 cut(s) 612, 1140
BstMAI GTCTC 2 cut(s) 9, 1033
BstMCI CGRYCG 1 cut(s) 1366
BstMWI GCNNNNNNNGC 2 cut(s) 236, 1210
BstNI CCWGG 2 cut(s) 594, 879
BstSCI CCNGG 2 cut(s) 592, 877
BstV1I GCAGC 1 cut(s) 147
BstV2I GAAGAC 2 cut(s) 735, 858
BstX2I RGATCY 2 cut(s) 311, 452
BstYI RGATCY 2 cut(s) 311, 452
Bsu36I CCTNAGG 1 cut(s) 330
BsuRI GGCC 2 cut(s) 102, 592
BtsCI GGATG 3 cut(s) 188, 1252, 1273
BtsIMutI CAGTG 3 cut(s) 63, 1030, 1522
Cac8I GCNNGC 1 cut(s) 1111
CaiI CAGNNNCTG 1 cut(s) 965
CfoI GCGC 2 cut(s) 612, 1140
Cfr13I GGNCC 1 cut(s) 100
Csp6I GTAC 1 cut(s) 963
CviAII CATG 6 cut(s) 56, 203, 971, 1084, 1135, 1528
CviQI GTAC 1 cut(s) 963
DdeI CTNAG 6 cut(s) 77, 330, 369, 456, 958, 1326
DraI TTTAAA 1 cut(s) 145
Eam1104I CTCTTC 5 cut(s) 171, 468, 612, 645, 1069
EarI CTCTTC 5 cut(s) 171, 468, 612, 645, 1069
EciI GGCGGA 2 cut(s) 209, 453
Ecl136II GAGCTC 1 cut(s) 1486
Eco130I CCWWGG 1 cut(s) 1536
Eco147I AGGCCT 1 cut(s) 592
Eco24I GRGCYC 1 cut(s) 1488
Eco53kI GAGCTC 1 cut(s) 1486
Eco57I CTGAAG 6 cut(s) 111, 195, 492, 549, 636, 723
Eco81I CCTNAGG 1 cut(s) 330
Eco88I CYCGRG 3 cut(s) 801, 1151, 1487
EcoICRI GAGCTC 1 cut(s) 1486
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 2 cut(s) 592, 877
EcoT14I CCWWGG 1 cut(s) 1536
EcoT38I GRGCYC 1 cut(s) 1488
ErhI CCWWGG 1 cut(s) 1536
FaeI CATG 6 cut(s) 59, 206, 974, 1087, 1138, 1531
FalI AAGNNNNNCTT 2 cut(s) 1048, 1080
FatI CATG 6 cut(s) 55, 202, 970, 1083, 1134, 1527
FauI CCCGC 1 cut(s) 1473
FbaI TGATCA 1 cut(s) 1290
Fnu4HI GCNGC 2 cut(s) 136, 1107
FokI GGATG 3 cut(s) 175, 1259, 1280
FriOI GRGCYC 1 cut(s) 1488
Fsp4HI GCNGC 2 cut(s) 136, 1107
FspBI CTAG 1 cut(s) 828
GlaI GCGC 2 cut(s) 611, 1139
GluI GCNGC 2 cut(s) 136, 1107
GsuI CTGGAG 2 cut(s) 900, 1058
HaeII RGCGCY 1 cut(s) 613
HaeIII GGCC 2 cut(s) 102, 592
HhaI GCGC 2 cut(s) 612, 1140
Hin1II CATG 6 cut(s) 59, 206, 974, 1087, 1138, 1531
Hin6I GCGC 2 cut(s) 610, 1138
HinP1I GCGC 2 cut(s) 610, 1138
HinfI GANTC 8 cut(s) 263, 518, 887, 941, 1124, 1253, 1307, 1376
HphI GGTGA 6 cut(s) 121, 164, 650, 683, 867, 1109
Hpy166II GTNNAC 2 cut(s) 833, 1559
Hpy188I TCNGA 9 cut(s) 9, 14, 472, 517, 529, 1018, 1290, 1422, 1554
Hpy8I GTNNAC 2 cut(s) 833, 1559
Hpy99I CGWCG 1 cut(s) 827
HpyAV CCTTC 6 cut(s) 86, 91, 99, 435, 911, 1079
HpyCH4III ACNGT 7 cut(s) 696, 901, 967, 1046, 1367, 1517, 1563
HpyCH4IV ACGT 1 cut(s) 822
HpyCH4V TGCA 4 cut(s) 63, 488, 541, 1304
HpyF10VI GCNNNNNNNGC 2 cut(s) 236, 1210
HpyF3I CTNAG 6 cut(s) 77, 330, 369, 456, 958, 1326
HpySE526I ACGT 1 cut(s) 822
Hsp92II CATG 6 cut(s) 59, 206, 974, 1087, 1138, 1531
HspAI GCGC 2 cut(s) 610, 1138
Ksp22I TGATCA 1 cut(s) 1290
LguI GCTCTTC 2 cut(s) 468, 612
LmnI GCTCC 5 cut(s) 334, 560, 1201, 1284, 1483
Lsp1109I GCAGC 1 cut(s) 147
LweI GCATC 5 cut(s) 197, 355, 703, 1009, 1339
MaeI CTAG 1 cut(s) 828
MaeII ACGT 1 cut(s) 822
MaeIII GTNAC 3 cut(s) 109, 1219, 1523
MfeI CAATTG 1 cut(s) 1118
MflI RGATCY 2 cut(s) 311, 452
MhlI GDGCHC 2 cut(s) 159, 1488
MluCI AATT 7 cut(s) 69, 212, 504, 642, 768, 1118, 1404
MlyI GAGTC 1 cut(s) 935
MmeI TCCRAC 1 cut(s) 1548
MroXI GAANNNNTTC 1 cut(s) 1548
MseI TTAA 8 cut(s) 144, 480, 645, 657, 867, 1197, 1242, 1494
MslI CAYNNNNRTG 2 cut(s) 363, 1226
MspCI CTTAAG 1 cut(s) 479
MspR9I CCNGG 2 cut(s) 594, 879
MunI CAATTG 1 cut(s) 1118
Mva1269I GAATGC 3 cut(s) 65, 490, 1337
MvaI CCWGG 2 cut(s) 594, 879
MwoI GCNNNNNNNGC 2 cut(s) 236, 1210
NlaIII CATG 6 cut(s) 59, 206, 974, 1087, 1138, 1531
NlaIV GGNNCC 5 cut(s) 238, 313, 556, 598, 1280
NmeAIII GCCGAG 1 cut(s) 414
NmuCI GTSAC 2 cut(s) 109, 1219
NspV TTCGAA 1 cut(s) 1341
PaeR7I CTCGAG 3 cut(s) 801, 1151, 1487
PceI AGGCCT 1 cut(s) 592
PciSI GCTCTTC 2 cut(s) 468, 612
PctI GAATGC 3 cut(s) 65, 490, 1337
PdmI GAANNNNTTC 1 cut(s) 1548
PfeI GAWTC 7 cut(s) 263, 518, 887, 1124, 1253, 1307, 1376
PflFI GACNNNGTC 1 cut(s) 1574
PflMI CCANNNNNTGG 1 cut(s) 764
PkrI GCNGC 2 cut(s) 137, 1108
PleI GAGTC 1 cut(s) 935
PpsI GAGTC 1 cut(s) 935
PshBI ATTAAT 1 cut(s) 867
Psp124BI GAGCTC 1 cut(s) 1488
Psp6I CCWGG 2 cut(s) 592, 877
PspGI CCWGG 2 cut(s) 592, 877
PspN4I GGNNCC 5 cut(s) 238, 313, 556, 598, 1280
PspPI GGNCC 1 cut(s) 100
PspXI VCTCGAGB 1 cut(s) 1487
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 2 cut(s) 311, 452
PsyI GACNNNGTC 1 cut(s) 1574
RsaI GTAC 1 cut(s) 964
RsaNI GTAC 1 cut(s) 963
RseI CAYNNNNRTG 2 cut(s) 363, 1226
SacI GAGCTC 1 cut(s) 1488
SapI GCTCTTC 2 cut(s) 468, 612
SaqAI TTAA 8 cut(s) 144, 480, 645, 657, 867, 1197, 1242, 1494
SatI GCNGC 2 cut(s) 136, 1107
Sau96I GGNCC 1 cut(s) 100
SchI GAGTC 1 cut(s) 935
ScrFI CCNGG 2 cut(s) 594, 879
SduI GDGCHC 2 cut(s) 159, 1488
SfaNI GCATC 5 cut(s) 197, 355, 703, 1009, 1339
Sfr274I CTCGAG 3 cut(s) 801, 1151, 1487
SfuI TTCGAA 1 cut(s) 1341
SlaI CTCGAG 3 cut(s) 801, 1151, 1487
SmiMI CAYNNNNRTG 2 cut(s) 363, 1226
SmlI CTYRAG 6 cut(s) 479, 801, 943, 1151, 1487, 1507
SmoI CTYRAG 6 cut(s) 479, 801, 943, 1151, 1487, 1507
Sse9I AATT 7 cut(s) 69, 212, 504, 642, 768, 1118, 1404
SseBI AGGCCT 1 cut(s) 592
SsiI CCGC 6 cut(s) 220, 438, 1107, 1282, 1400, 1480
SspI AATATT 1 cut(s) 865
SspMI CTAG 1 cut(s) 828
SstI GAGCTC 1 cut(s) 1488
StuI AGGCCT 1 cut(s) 592
StyD4I CCNGG 2 cut(s) 592, 877
StyI CCWWGG 1 cut(s) 1536
TaaI ACNGT 7 cut(s) 696, 901, 967, 1046, 1367, 1517, 1563
TaiI ACGT 1 cut(s) 825
TaqI TCGA 9 cut(s) 496, 523, 802, 939, 1152, 1333, 1341, 1488, 1542
TasI AATT 7 cut(s) 69, 212, 504, 642, 768, 1118, 1404
TauI GCSGC 1 cut(s) 1109
TfiI GAWTC 7 cut(s) 263, 518, 887, 1124, 1253, 1307, 1376
Tru1I TTAA 8 cut(s) 144, 480, 645, 657, 867, 1197, 1242, 1494
Tru9I TTAA 8 cut(s) 144, 480, 645, 657, 867, 1197, 1242, 1494
TscAI CASTG 3 cut(s) 70, 1030, 1522
TseFI GTSAC 2 cut(s) 109, 1219
TseI GCWGC 1 cut(s) 135
Tsp45I GTSAC 2 cut(s) 109, 1219
TspDTI ATGAA 4 cut(s) 72, 708, 1481, 1544
TspGWI ACGGA 3 cut(s) 547, 729, 1492
TspRI CASTG 3 cut(s) 70, 1030, 1522
Tth111I GACNNNGTC 1 cut(s) 1574
Van91I CCANNNNNTGG 1 cut(s) 764
Vha464I CTTAAG 1 cut(s) 479
VspI ATTAAT 1 cut(s) 867
XapI RAATTY 2 cut(s) 69, 212
XcmI CCANNNNNNNNNTGG 2 cut(s) 230, 1030
XhoI CTCGAG 3 cut(s) 801, 1151, 1487
XmnI GAANNNNTTC 1 cut(s) 1548
XspI CTAG 1 cut(s) 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.