Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002091

Physical Location & Seq

Genomic Coordinates Forward (+)

29706934 .. 29715237

Gene Structure 8304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00189890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGGCTTTGATAGGAAGAGTGCACCCTGATTGCGTAAACGTTGCGAATCCGTACCATGAATGCACTGAAAATTGCCTGAGAAAAATTGCAGAAGGGAAAGGCCGGAAGCATAAAAAGAAATCAGATAATGGCGGTGATATAAAAGATGGTGAGTTCAACATTAAGATGGCTGGAGAGAGAAGAGTGGATGCAACTAGGGCATCTAATCCTTACTATCAATCTGGTCAATCTTTTCCAAAAAGAACTGCCGGTGGTGAAGCTCGTGGGGATATAAAAGAATCAGGCTCCATACTTGATGTTCCTATATTGGGTGGACGAAAAGACAGATCCCGACCAAAGACTCCTCAAGATCTTGACAATGTATCTGACCGAAGTGTGGTTTATCCTTATGATGCTCAATCATCTCCATCTAAGGACAAGGTGAAAGTAGAGAATGGGTCTGTCCTTGATGATCCTATATTTGGAAAAAGAAAGCCAGTCTCCCAAACAAGGTCTGCTGAAGAGCATGAAAATGGTCAAGGTGTTGATCCTTCATCATTTCCAGAAAAGCTGAAAATAGAGAACGGCTCTGCCCTTGATGATCCTATATTTGGCAGAAGAAAGCAGGTAGCCCAGCCAAAGCCCCATGAAGAGATTGACAATGGATCCGGTCAAGGTTCAGTTAATCCTTCTGGTTCTCCCATGTCTCCATCTAATGAAATTGTGAAAATAGGGAATGGCTCCACCCTTGATGATCTTATATTTGGCCGCAAAAAGCAGGGATCTGAACCAAAGCCTCAAGAAGAGATTGAGAATGTACCTGTTGTGAAATTAGATAATGATGAGTATAAGTCTTATTCTGGACCGCTTGCTCAAGTAAAAGATCCTTCTTTGAACAAGAAGCAAATCAGTTCCTCTGGGGCAGTGCCTACATCTGGAATTATCAAAATGACCCCCTCTCTCTCTCTCCCCACGCACAATAGTGGAGAAGGTCCCACTGCCACACCTTCTGAAAACAGAAGCTTCAGTTTCTCAGGTTCTCCCTATGTTTTGGAAGAGAGTGATGATGACGATGCACGATCTGTCAATTCTGATTCCAGTGTTTCTGTGGGAAAGTACCGTGTGAAAGGAAGCTTATGTTCCATTCTCCAGTCAATCTTTGACAAGTATGGTGATATAGCAGCAAGCTGTCAATTGGAATCAATTGTCATTCGCTCTTATTACCTCGAGTGTGTGTGTTATGTGGTTCAAGAGTTGAAACGCACTTCGGTGAAGCAGCTGACAAAGTCAAAAATCAAAGAAATGTCAGCTATGCTCAAGGATGTAGAATCTTCAGGAATGGATGTTGGTTGGCTTCGTCTCATGCTCAATGAATGTGCACAATCCATTGATCTCGTGAGTCAGCATCGAGCATTCGAACTAGAAAAGGCCAACTGTGATCGTGGCATTGAATCAATAAGGAAAGAACTAGAGTCCCAGATGGAGGCTTTGGCTCTGAAAGAAAAGGAGGTTGCTGATGCCAAGAAGCAAGTTTCTGAAACCAGAGCCCATCTGAGGGATCTTGAGCTCAAATCATCTATTTTGAGTGAGACTATTAGTAATCTGAAGTCCAAGGTTGAAAATTTTCAAAGCAAGTCATTGTTGGACAAGGTTGTCTGTCCATTTCACTGTAGCTACTGCAAGGATATAGAAAGAGCCGAATCATGTCTGATGAAGGAAGAGTGCACCGGGATTGCAGGAATGCATCCAATCCCTACCACGAATGCAGCGAAATCTGTACAAGTTAGTGGTGGTAGTGGCAAATCAAAATTAGAGGCTGCTCAGCAAGAGGAAGATCTAGATAGACCATCAGAGACTGATGAACATTCTGGTGATGGTGATGAGCCTCCTGCTGAGGAGGAGGAGAATATGGAAGGAGACTTCACAAAGTTCACAGGGAGGAAGAAAAAGTTGTGGGAATTAAGGATGAAGATGAATAAGGCTAGGAAAGCAAATCAAACAGATATTGCAGCTGAAAAGAAAAGAATGGAACCTCCACAAGAATCAAGGGGCATTTCTAAACAAAAATGGCTTGAAGAGAGGAAAAAAGAATTGATGATTGATAATGATGGCATGTCCTTAGTTCAGTTGGCCATGTCATGCCCTTTCGTGCACACACAGTGGAATTATCTCCTGGATATTGCAGAGTTTGTTTTTAATCAGAAAACATTGTATGATGCATACAAAAAGCGAACAAAGAATATTGATATTGATTTGGAAGATTACAATAAGATGAAAGAAGAAGATCCAGAGTTCTACCGTGAAGCTTCCAGCCTTCAATACGGGAAGGCTCCAAAGATCTCAGAGGATAAAATTGACAAGATGGTGAAGGAACTAAAGGACCAGGAAGAGAAGAAAAAGAAATTCAGCAGGAGGAGGAGGTTCCATGATGAGAAGGATATTGACTCGATCAATGACCGTAATGAGCATTTTAACAAGAAGATTGAGCGAGCTTTTGGTAAATACACGCTGGAAATCAAAAACAATCTCGAGCGAGGAACTGCATTGCCTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PEARLI-4

Protein Analysis

844

Amino Acids

94.55

Weight (kDa)

6.2

Isoelectric Point (pI)

57.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEARLI-4	PF05278	344 - 542	5.2e-65	Arabidopsis phospholipase-like protein (PEARLI 4)
SYF2	PF08231	722 - 837	8.6e-34	SYF2 splicing factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16900 AT2G16900 AT2G16900 AT2G16900 AT2G16900 AT2G16900 AT2G16900 AT4G35110 AT4G35110 AT4G35110 AT4G35110 AT4G35110 AT4G35110
fragaria_vesca	FvH4_2g15450 FvH4_2g15450 FvH4_2g15450 FvH4_2g15450 FvH4_2g15450
malus_domestica	MD05G1122800.v1.1 MD10G1125400.v1.1
prunus_persica	Prupe.8G166700_v2.0.a1 Prupe.8G166700_v2.0.a1 Prupe.8G166700_v2.0.a1 Prupe.8G166700_v2.0.a1 Prupe.8G166700_v2.0.a1
pyrus_communis	pycom05g11710 pycom10g10800
rosa_chinensis	RchiOBHm_Chr6g0278421 RchiOBHm_Chr6g0278431
rosa_laevigata	RLG00000013229
rosa_multiflora	Rmu_sc0003837.1_g000016 Rmu_sc0005234.1_g000009
rosa_roxburghii	Rroxscaffold_7G00189890 Rroxscaffold_7G00190360
rosa_rugosa	Rorug06G0116900
rosa_samantha	Rh4AG317400 Rh4BG325600 Rh4CG340600 Rh4DG320800 Rh6AG226200 Rh6BG230300 Rh6CG233500 Rh6DG224800
rosa_wichuraiana	Rw6G019730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1631
Acc36I	ACCTGC	1 cut(s)	595
AciI	CCGC	3 cut(s)	132, 748, 845
AclI	AACGTT	1 cut(s)	39
AcoI	YGGCCR	2 cut(s)	745, 2109
AcsI	RAATTY	2 cut(s)	1600, 2381
AcuI	CTGAAG	4 cut(s)	519, 988, 1296, 1604
AdeI	CACNNNGTG	1 cut(s)	2139
AfaI	GTAC	4 cut(s)	53, 798, 1097, 1758
AfiI	CCNNNNNNNGG	9 cut(s)	308, 376, 461, 489, 590, 914, 1462, 1533, 1534
AgsI	TTSAA	9 cut(s)	157, 874, 1229, 1237, 1430, 1598, 1607, 2054, 2297
AjnI	CCWGG	2 cut(s)	2151, 2361
AleI	CACNNNNGTG	2 cut(s)	960, 1247
Alw21I	GWGCWC	5 cut(s)	24, 1360, 1548, 1706, 2133
Alw26I	GTCTC	6 cut(s)	484, 690, 1343, 1562, 1826, 1890
Alw44I	GTGCAC	4 cut(s)	20, 1356, 1702, 2129
AlwNI	CAGNNNCTG	1 cut(s)	1835
Ama87I	CYCGRG	2 cut(s)	1205, 2507
AoxI	GGCC	4 cut(s)	100, 745, 1407, 2109
ApaLI	GTGCAC	4 cut(s)	20, 1356, 1702, 2129
ApeKI	GCWGC	5 cut(s)	1160, 1255, 1745, 1796, 1988
ApoI	RAATTY	2 cut(s)	1600, 2381
Asp700I	GAANNNNTTC	1 cut(s)	1602
AspS9I	GGNCC	3 cut(s)	842, 971, 2359
AsuC2I	CCSGG	1 cut(s)	1708
AsuHPI	GGTGA	9 cut(s)	146, 161, 266, 433, 1163, 1261, 1862, 1868, 2356
AsuII	TTCGAA	1 cut(s)	1395
AvaI	CYCGRG	2 cut(s)	1205, 2507
AvaII	GGWCC	3 cut(s)	842, 971, 2359
BaeGI	GKGCMC	4 cut(s)	24, 1360, 1706, 2133
BalI	TGGCCA	1 cut(s)	2111
BamHI	GGATCC	1 cut(s)	644
BanII	GRGCYC	2 cut(s)	1528, 1548
BauI	CACGAG	2 cut(s)	261, 1373
Bbv12I	GWGCWC	5 cut(s)	24, 1360, 1548, 1706, 2133
BbvCI	CCTCAGC	1 cut(s)	1872
BbvI	GCAGC	5 cut(s)	1172, 1267, 1757, 1783, 2000
BceAI	ACGGC	1 cut(s)	580
BciT130I	CCWGG	2 cut(s)	2153, 2363
BcnI	CCSGG	1 cut(s)	1708
BcoDI	GTCTC	6 cut(s)	484, 690, 1343, 1562, 1826, 1890
BfaI	CTAG	5 cut(s)	195, 1400, 1448, 1817, 1962
BfmI	CTRYAG	1 cut(s)	1648
BfuAI	ACCTGC	1 cut(s)	595
BglII	AGATCT	3 cut(s)	349, 1813, 2316
BisI	GCNGC	6 cut(s)	748, 1161, 1256, 1746, 1797, 1989
BlpI	GCTNAGC	1 cut(s)	1800
BlsI	GCNGC	6 cut(s)	749, 1162, 1257, 1747, 1798, 1990
Bme1390I	CCNGG	3 cut(s)	1708, 2153, 2363
Bme18I	GGWCC	3 cut(s)	842, 971, 2359
BmeT110I	CYCGRG	2 cut(s)	1205, 2507
BmgT120I	GGNCC	3 cut(s)	842, 971, 2359
BmiI	GGNNCC	7 cut(s)	286, 646, 721, 973, 2010, 2310, 2402
BmrFI	CCNGG	3 cut(s)	1708, 2153, 2363
BmsI	GCATC	8 cut(s)	178, 209, 382, 1042, 1393, 1486, 1732, 2185
BplI	GAGNNNNNCTC	2 cut(s)	551, 583
BpmI	CTGGAG	2 cut(s)	192, 1112
Bpu10I	CCTNAGC	1 cut(s)	1872
Bpu1102I	GCTNAGC	1 cut(s)	1800
Bpu14I	TTCGAA	1 cut(s)	1395
BpuEI	CTTGAG	5 cut(s)	330, 762, 837, 1280, 1562
BpuMI	CCSGG	1 cut(s)	1708
BsaJI	CCNNGG	1 cut(s)	1590
BsaWI	WCCGGW	1 cut(s)	647
Bsc4I	CCNNNNNNNGG	9 cut(s)	308, 376, 461, 489, 590, 914, 1462, 1533, 1534
Bse118I	RCCGGY	1 cut(s)	248
Bse1I	ACTGG	3 cut(s)	476, 1077, 1129
Bse3DI	GCAATG	1 cut(s)	2522
BseBI	CCWGG	2 cut(s)	2153, 2363
BseDI	CCNNGG	1 cut(s)	1590
BseGI	GGATG	5 cut(s)	193, 1306, 1327, 1723, 1950
BseLI	CCNNNNNNNGG	9 cut(s)	308, 376, 461, 489, 590, 914, 1462, 1533, 1534
BseMI	GCAATG	1 cut(s)	2522
BseMII	CTCAG	6 cut(s)	68, 1026, 1523, 1814, 1863, 2334
BseNI	ACTGG	3 cut(s)	476, 1077, 1129
BseRI	GAGGAG	6 cut(s)	333, 1889, 1892, 1895, 2407, 2410
BseSI	GKGCMC	4 cut(s)	24, 1360, 1706, 2133
BseXI	GCAGC	5 cut(s)	1172, 1267, 1757, 1783, 2000
BseYI	CCCAGC	1 cut(s)	612
BshFI	GGCC	4 cut(s)	102, 747, 1409, 2111
BsiHKAI	GWGCWC	5 cut(s)	24, 1360, 1548, 1706, 2133
BsiHKCI	CYCGRG	2 cut(s)	1205, 2507
BsiSI	CCGG	4 cut(s)	103, 249, 648, 1707
BslFI	GGGAC	2 cut(s)	957, 1438
BslI	CCNNNNNNNGG	9 cut(s)	308, 376, 461, 489, 590, 914, 1462, 1533, 1534
BsmAI	GTCTC	6 cut(s)	484, 690, 1343, 1562, 1826, 1890
BsmBI	CGTCTC	1 cut(s)	1343
BsmFI	GGGAC	2 cut(s)	957, 1438
BsmI	GAATGC	4 cut(s)	65, 1391, 1725, 1747
BsnI	GGCC	4 cut(s)	102, 747, 1409, 2111
BsoBI	CYCGRG	2 cut(s)	1205, 2507
Bsp119I	TTCGAA	1 cut(s)	1395
Bsp1286I	GDGCHC	6 cut(s)	24, 1360, 1528, 1548, 1706, 2133
Bsp1407I	TGTACA	1 cut(s)	1756
Bsp1720I	GCTNAGC	1 cut(s)	1800
BspACI	CCGC	3 cut(s)	132, 748, 845
BspANI	GGCC	4 cut(s)	102, 747, 1409, 2111
BspCNI	CTCAG	6 cut(s)	69, 1025, 1524, 1813, 1864, 2333
BspLI	GGNNCC	7 cut(s)	286, 646, 721, 973, 2010, 2310, 2402
BspMI	ACCTGC	1 cut(s)	595
BspQI	GCTCTTC	1 cut(s)	495
BspT104I	TTCGAA	1 cut(s)	1395
BsrDI	GCAATG	1 cut(s)	2522
BsrFI	RCCGGY	1 cut(s)	248
BsrGI	TGTACA	1 cut(s)	1756
BsrI	ACTGG	3 cut(s)	476, 1077, 1129
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	1 cut(s)	1590
BssSI	CACGAG	2 cut(s)	261, 1373
BssT1I	CCWWGG	1 cut(s)	1590
Bst2BI	CACGAG	2 cut(s)	261, 1373
Bst2UI	CCWGG	2 cut(s)	2153, 2363
Bst4CI	ACNGT	6 cut(s)	1100, 1415, 1649, 2139, 2279, 2438
Bst6I	CTCTTC	9 cut(s)	10, 175, 495, 624, 777, 1029, 1692, 2049, 2361
BstAUI	TGTACA	1 cut(s)	1756
BstBI	TTCGAA	1 cut(s)	1395
BstC8I	GCNNGC	3 cut(s)	849, 1165, 2469
BstDEI	CTNAG	8 cut(s)	77, 411, 1012, 1532, 1800, 1872, 2098, 2320
BstF5I	GGATG	5 cut(s)	193, 1306, 1327, 1723, 1950
BstMAI	GTCTC	6 cut(s)	484, 690, 1343, 1562, 1826, 1890
BstMWI	GCNNNNNNNGC	2 cut(s)	197, 1967
BstNI	CCWGG	2 cut(s)	2153, 2363
BstNSI	RCATGY	1 cut(s)	2095
BstSCI	CCNGG	3 cut(s)	1706, 2151, 2361
BstSFI	CTRYAG	1 cut(s)	1648
BstSLI	GKGCMC	4 cut(s)	24, 1360, 1706, 2133
BstV1I	GCAGC	5 cut(s)	1172, 1267, 1757, 1783, 2000
BstX2I	RGATCY	9 cut(s)	326, 349, 644, 761, 862, 1537, 1813, 2263, 2316
BstYI	RGATCY	9 cut(s)	326, 349, 644, 761, 862, 1537, 1813, 2263, 2316
BsuRI	GGCC	4 cut(s)	102, 747, 1409, 2111
BtsCI	GGATG	5 cut(s)	193, 1306, 1327, 1723, 1950
BtsI	GCAGTG	2 cut(s)	909, 975
BtsIMutI	CAGTG	6 cut(s)	63, 909, 975, 1084, 1645, 2144
BveI	ACCTGC	1 cut(s)	595
Cac8I	GCNNGC	3 cut(s)	849, 1165, 2469
CaiI	CAGNNNCTG	1 cut(s)	1835
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	3 cut(s)	842, 971, 2359
Csp6I	GTAC	4 cut(s)	52, 797, 1096, 1757
CviQI	GTAC	4 cut(s)	52, 797, 1096, 1757
DdeI	CTNAG	8 cut(s)	77, 411, 1012, 1532, 1800, 1872, 2098, 2320
DraIII	CACNNNGTG	1 cut(s)	2139
DrdI	GACNNNNNNGTC	1 cut(s)	1631
DseDI	GACNNNNNNGTC	1 cut(s)	1631
EaeI	YGGCCR	2 cut(s)	745, 2109
Eam1104I	CTCTTC	9 cut(s)	10, 175, 495, 624, 777, 1029, 1692, 2049, 2361
EarI	CTCTTC	9 cut(s)	10, 175, 495, 624, 777, 1029, 1692, 2049, 2361
Ecl136II	GAGCTC	1 cut(s)	1546
Eco130I	CCWWGG	1 cut(s)	1590
Eco24I	GRGCYC	2 cut(s)	1528, 1548
Eco47I	GGWCC	3 cut(s)	842, 971, 2359
Eco53kI	GAGCTC	1 cut(s)	1546
Eco57I	CTGAAG	4 cut(s)	519, 988, 1296, 1604
Eco88I	CYCGRG	2 cut(s)	1205, 2507
EcoICRI	GAGCTC	1 cut(s)	1546
EcoO109I	RGGNCCY	1 cut(s)	971
EcoRII	CCWGG	2 cut(s)	2151, 2361
EcoT14I	CCWWGG	1 cut(s)	1590
EcoT22I	ATGCAT	2 cut(s)	1725, 2200
EcoT38I	GRGCYC	2 cut(s)	1528, 1548
ErhI	CCWWGG	1 cut(s)	1590
Esp3I	CGTCTC	1 cut(s)	1343
FaqI	GGGAC	2 cut(s)	957, 1438
Fnu4HI	GCNGC	6 cut(s)	748, 1161, 1256, 1746, 1797, 1989
FokI	GGATG	5 cut(s)	200, 1313, 1334, 1710, 1957
FriOI	GRGCYC	2 cut(s)	1528, 1548
Fsp4HI	GCNGC	6 cut(s)	748, 1161, 1256, 1746, 1797, 1989
FspBI	CTAG	5 cut(s)	195, 1400, 1448, 1817, 1962
GluI	GCNGC	6 cut(s)	748, 1161, 1256, 1746, 1797, 1989
GsaI	CCCAGC	1 cut(s)	616
GsuI	CTGGAG	2 cut(s)	192, 1112
HaeIII	GGCC	4 cut(s)	102, 747, 1409, 2111
HapII	CCGG	4 cut(s)	103, 249, 648, 1707
HindIII	AAGCTT	3 cut(s)	1000, 1111, 2283
HpaII	CCGG	4 cut(s)	103, 249, 648, 1707
HphI	GGTGA	9 cut(s)	146, 161, 266, 433, 1163, 1261, 1862, 1868, 2356
Hpy166II	GTNNAC	7 cut(s)	22, 37, 314, 1358, 1704, 1911, 2131
Hpy8I	GTNNAC	7 cut(s)	22, 37, 314, 1358, 1704, 1911, 2131
HpyCH4III	ACNGT	6 cut(s)	1100, 1415, 1649, 2139, 2279, 2438
HpyCH4IV	ACGT	1 cut(s)	39
HpyF10VI	GCNNNNNNNGC	2 cut(s)	197, 1967
HpyF3I	CTNAG	8 cut(s)	77, 411, 1012, 1532, 1800, 1872, 2098, 2320
HpySE526I	ACGT	1 cut(s)	39
LguI	GCTCTTC	1 cut(s)	495
LmnI	GCTCC	3 cut(s)	290, 725, 2314
Lsp1109I	GCAGC	5 cut(s)	1172, 1267, 1757, 1783, 2000
LweI	GCATC	8 cut(s)	178, 209, 382, 1042, 1393, 1486, 1732, 2185
MaeI	CTAG	5 cut(s)	195, 1400, 1448, 1817, 1962
MaeII	ACGT	1 cut(s)	39
MfeI	CAATTG	2 cut(s)	1172, 1182
MflI	RGATCY	9 cut(s)	326, 349, 644, 761, 862, 1537, 1813, 2263, 2316
MhlI	GDGCHC	6 cut(s)	24, 1360, 1528, 1548, 1706, 2133
MlsI	TGGCCA	1 cut(s)	2111
MluNI	TGGCCA	1 cut(s)	2111
MlyI	GAGTC	4 cut(s)	334, 1387, 1460, 2417
MmeI	TCCRAC	1 cut(s)	1602
Mox20I	TGGCCA	1 cut(s)	2111
Mph1103I	ATGCAT	2 cut(s)	1725, 2200
MroXI	GAANNNNTTC	1 cut(s)	1602
MscI	TGGCCA	1 cut(s)	2111
MseI	TTAA	5 cut(s)	162, 663, 1940, 2175, 2451
MslI	CAYNNNNRTG	5 cut(s)	164, 510, 960, 1247, 1848
Msp20I	TGGCCA	1 cut(s)	2111
MspA1I	CMGCKG	2 cut(s)	1258, 1991
MspI	CCGG	4 cut(s)	103, 249, 648, 1707
MspR9I	CCNGG	3 cut(s)	1708, 2153, 2363
MunI	CAATTG	2 cut(s)	1172, 1182
Mva1269I	GAATGC	4 cut(s)	65, 1391, 1725, 1747
MvaI	CCWGG	2 cut(s)	2153, 2363
MwoI	GCNNNNNNNGC	2 cut(s)	197, 1967
NciI	CCSGG	1 cut(s)	1708
NlaIV	GGNNCC	7 cut(s)	286, 646, 721, 973, 2010, 2310, 2402
NsiI	ATGCAT	2 cut(s)	1725, 2200
NspI	RCATGY	1 cut(s)	2095
NspV	TTCGAA	1 cut(s)	1395
OliI	CACNNNNGTG	2 cut(s)	960, 1247
PaeR7I	CTCGAG	2 cut(s)	1205, 2507
PciSI	GCTCTTC	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	1 cut(s)	1745
PctI	GAATGC	4 cut(s)	65, 1391, 1725, 1747
PdmI	GAANNNNTTC	1 cut(s)	1602
PfeI	GAWTC	8 cut(s)	46, 278, 1073, 1178, 1307, 1430, 1679, 2021
PflFI	GACNNNGTC	1 cut(s)	1264
PfoI	TCCNGGA	1 cut(s)	2151
PkrI	GCNGC	6 cut(s)	749, 1162, 1257, 1747, 1798, 1990
PleI	GAGTC	4 cut(s)	334, 1386, 1459, 2417
PpsI	GAGTC	4 cut(s)	334, 1386, 1459, 2417
PpuMI	RGGWCCY	1 cut(s)	971
Psp124BI	GAGCTC	1 cut(s)	1548
Psp1406I	AACGTT	1 cut(s)	39
Psp5II	RGGWCCY	1 cut(s)	971
Psp6I	CCWGG	2 cut(s)	2151, 2361
PspFI	CCCAGC	1 cut(s)	612
PspGI	CCWGG	2 cut(s)	2151, 2361
PspN4I	GGNNCC	7 cut(s)	286, 646, 721, 973, 2010, 2310, 2402
PspPI	GGNCC	3 cut(s)	842, 971, 2359
PspPPI	RGGWCCY	1 cut(s)	971
PspXI	VCTCGAGB	1 cut(s)	1205
PstNI	CAGNNNCTG	1 cut(s)	1835
PsuI	RGATCY	9 cut(s)	326, 349, 644, 761, 862, 1537, 1813, 2263, 2316
PsyI	GACNNNGTC	1 cut(s)	1264
PvuII	CAGCTG	2 cut(s)	1258, 1991
RsaI	GTAC	4 cut(s)	53, 798, 1097, 1758
RsaNI	GTAC	4 cut(s)	52, 797, 1096, 1757
RseI	CAYNNNNRTG	5 cut(s)	164, 510, 960, 1247, 1848
SacI	GAGCTC	1 cut(s)	1548
SapI	GCTCTTC	1 cut(s)	495
SaqAI	TTAA	5 cut(s)	162, 663, 1940, 2175, 2451
SatI	GCNGC	6 cut(s)	748, 1161, 1256, 1746, 1797, 1989
Sau96I	GGNCC	3 cut(s)	842, 971, 2359
SchI	GAGTC	4 cut(s)	334, 1387, 1460, 2417
ScrFI	CCNGG	3 cut(s)	1708, 2153, 2363
SduI	GDGCHC	6 cut(s)	24, 1360, 1528, 1548, 1706, 2133
SfaNI	GCATC	8 cut(s)	178, 209, 382, 1042, 1393, 1486, 1732, 2185
SfcI	CTRYAG	1 cut(s)	1648
Sfr274I	CTCGAG	2 cut(s)	1205, 2507
SfuI	TTCGAA	1 cut(s)	1395
SinI	GGWCC	3 cut(s)	842, 971, 2359
SlaI	CTCGAG	2 cut(s)	1205, 2507
SmiMI	CAYNNNNRTG	5 cut(s)	164, 510, 960, 1247, 1848
SmlI	CTYRAG	7 cut(s)	345, 777, 852, 1205, 1295, 1541, 2507
SmoI	CTYRAG	7 cut(s)	345, 777, 852, 1205, 1295, 1541, 2507
SsiI	CCGC	3 cut(s)	132, 748, 845
SspI	AATATT	1 cut(s)	2221
SspMI	CTAG	5 cut(s)	195, 1400, 1448, 1817, 1962
SstI	GAGCTC	1 cut(s)	1548
StyD4I	CCNGG	3 cut(s)	1706, 2151, 2361
StyI	CCWWGG	1 cut(s)	1590
TaaI	ACNGT	6 cut(s)	1100, 1415, 1649, 2139, 2279, 2438
TaiI	ACGT	1 cut(s)	42
TaqI	TCGA	5 cut(s)	1206, 1387, 1395, 2426, 2508
TaqII	GACCGA	1 cut(s)	384
TatI	WGTACW	1 cut(s)	1756
TauI	GCSGC	1 cut(s)	750
TfiI	GAWTC	8 cut(s)	46, 278, 1073, 1178, 1307, 1430, 1679, 2021
Tru1I	TTAA	5 cut(s)	162, 663, 1940, 2175, 2451
Tru9I	TTAA	5 cut(s)	162, 663, 1940, 2175, 2451
TscAI	CASTG	6 cut(s)	70, 909, 982, 1084, 1652, 2144
TseI	GCWGC	5 cut(s)	1160, 1255, 1745, 1796, 1988
TspGWI	ACGGA	1 cut(s)	39
TspRI	CASTG	6 cut(s)	70, 909, 982, 1084, 1652, 2144
Tth111I	GACNNNGTC	1 cut(s)	1264
VneI	GTGCAC	4 cut(s)	20, 1356, 1702, 2129
VpaK11BI	GGWCC	3 cut(s)	842, 971, 2359
XapI	RAATTY	2 cut(s)	1600, 2381
XbaI	TCTAGA	1 cut(s)	1816
XceI	RCATGY	1 cut(s)	2095
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1084
XhoI	CTCGAG	2 cut(s)	1205, 2507
XmnI	GAANNNNTTC	1 cut(s)	1602
XspI	CTAG	5 cut(s)	195, 1400, 1448, 1817, 1962
Zsp2I	ATGCAT	2 cut(s)	1725, 2200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.