pycom05g12450

Protein kinase domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
15900931 .. 15903400
2470 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g12450.5

Sequence Viewer

Length: 1614 bp
ATGTTGTCGTTCAGGTCCAAGAAATCGAAGAAGAGGACGATAATTGTCGGTCTGAAATCGGATAATTCAAGCAGAGAAATGCTTCTGAGATTGCTCATTGCTGTTGTAAAACACAGGGACAGTGTGATTGCTGTTCATGTTCAAGAGAACGATGATTCTTTTGATCCCAACACTTTCCACATCCATGAAGATTTCTGCAAATCCAAGCAGGTGGATTTCCAACTAAAAGTGTGCATTGCAGATTCTTACATTTCTGAATTAACCTACCAAGTCAGGATCGGCTTTGCATCAATCCTTGTACTTGGTTGCAGCCTCTCAGGGCCAAGTTTTTCAGCTATCCATACTTGCTTGAAAGGGTTACCTCCAACATGCACACTACTGGTGATGAATACCGTGGGAAGAGTCCTAATGGAGGGGCAGGGGACTTGCCAACAAGGCTCTGTAAGGGCAGCAGCCCTACAATCTTCTCACTCATTTTCCTCAACCTACACTTGCCATTTCCAATCAAATACCACCCGGCAGTTGCAAAAGTCCTTAACAACTCCGCCTTCCTCTACAGTGTCGTTGATGCGGCCAACGACTACTAGAAGAGCACTCTCTGCCGTAAATAAAATGGTGGAGGTCGCTGATTTGGCGTCCGAAAAACTGTTTCAAAGATTGGAAGTACTACAAGCAGAAGGTTCAAGCAGGCATTTCACGCCGAAAGAGCTTCATGATGCAACTAACAATTTCAGCCCAGCCACAGTGATTGGAGAGGGTGGACATAGCAAGGTGTACTGCGCCAAACTTGGAAATGGTGAAGCTGCAGCTGTGAAAGTCCTCCAAACGACACGGTGCTCAACAGCGGATTTTTTTCGAGAAGTAGATTTGTTATCTGGTATGAAGCATGACAACATTGTGCAGATAATCGGGTTCTGTCGTAGTGGGGAGATGCAAGCAATTGTGTATAAACTTTTGATGGGAAGCTTGAGGCAGAATTTAAGAGAGCTAAAGTGGAGTGAGAGGATGAAAGTTGCAATCGGCATGGCAAAGGCGTTGGACTACCTTCATGATTCTCACAGTCCTCCCATCATCCATAGGGATGTGAAGTCATCTAACATTCTCCTCTCCCACAATTGCGAACCGATATTATCAGATTTTGGAGCAGCAATGTTACTTCAAACTCATCAATCTCAAGCAAACACAAAGGCGCCGTTCCATGTTGTTGGGACGTTTGGATACTTAGCCCCGGAGTACATGATGTATGGAAAGGTTGATGAAAAGATAGATGTGTACTCATATGGAGTTGTGCTCCTAGAACTTATCACCGGGAAAGAAGCGATTCAAACTCACCAGGAGATTCGCGAAAGCTTAGTATTATGGGCAAGGTCCTTGCTGAGCTGTGGCATATGCGAACGTCTGATCGATCCTCACTTGATCGAACACTACAACAAGGAAGAGATGGAAATAATGATGATAGCGGCACGCCTCTGCCTTATGCACTCATCTTCTAGAAGGCCAACCATGAAAACGATACTGAAGTTACTTGAGAAGCCAGATAACTGGTTAAGGATGCAGAGAGAAAGAGACGAGTTTCTAAACGTAACTGAAAGAGGCAAAACAGCCCTATCTTGA

Protein Analysis

538

Amino Acids

60.14

Weight (kDa)

8.8

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 199
Acc36I ACCTGC 1 cut(s) 199
AccB1I GGYRCC 1 cut(s) 1189
AccII CGCG 1 cut(s) 1344
AciI CCGC 4 cut(s) 545, 571, 845, 1460
AclWI GGATC 3 cut(s) 158, 284, 1400
AcoI YGGCCR 1 cut(s) 572
AcsI RAATTY 1 cut(s) 976
AcuI CTGAAG 1 cut(s) 1538
AcyI GRCGYC 2 cut(s) 635, 1190
AfaI GTAC 5 cut(s) 300, 666, 776, 1235, 1274
AfiI CCNNNNNNNGG 1 cut(s) 412
AgsI TTSAA 7 cut(s) 69, 143, 352, 653, 684, 1160, 1325
AjnI CCWGG 1 cut(s) 1332
AluBI AGCT 8 cut(s) 335, 709, 803, 809, 966, 988, 1350, 1380
AluI AGCT 8 cut(s) 335, 709, 803, 809, 966, 988, 1350, 1380
Alw21I GWGCWC 3 cut(s) 595, 839, 1293
Alw26I GTCTC 1 cut(s) 1560
AlwI GGATC 3 cut(s) 158, 284, 1400
AoxI GGCC 3 cut(s) 320, 572, 1496
ApeKI GCWGC 6 cut(s) 309, 449, 452, 803, 806, 1145
ApoI RAATTY 1 cut(s) 976
Asp700I GAANNNNTTC 2 cut(s) 81, 1320
AspLEI GCGC 2 cut(s) 782, 1192
AspS9I GGNCC 3 cut(s) 15, 320, 1368
AsuC2I CCSGG 3 cut(s) 517, 1229, 1309
AsuHPI GGTGA 4 cut(s) 394, 809, 1297, 1322
AvaII GGWCC 2 cut(s) 15, 1368
BaeI ACNNNNGTAYC 2 cut(s) 1505, 1538
BanI GGYRCC 1 cut(s) 1189
Bbv12I GWGCWC 3 cut(s) 595, 839, 1293
BbvI GCAGC 6 cut(s) 321, 461, 464, 790, 818, 1157
BccI CCATC 3 cut(s) 952, 1076, 1435
BceAI ACGGC 2 cut(s) 587, 1177
BciT130I CCWGG 1 cut(s) 1334
BciVI GTATCC 1 cut(s) 1211
BcnI CCSGG 3 cut(s) 517, 1229, 1309
BcoDI GTCTC 1 cut(s) 1560
BfaI CTAG 3 cut(s) 585, 1295, 1491
BfmI CTRYAG 2 cut(s) 555, 804
BfoI RGCGCY 1 cut(s) 1193
BfuAI ACCTGC 1 cut(s) 199
BfuI GTATCC 1 cut(s) 1211
BglI GCCNNNNNGGC 1 cut(s) 435
BisI GCNGC 8 cut(s) 310, 450, 453, 572, 804, 807, 1146, 1461
BlpI GCTNAGC 1 cut(s) 1376
BlsI GCNGC 8 cut(s) 311, 451, 454, 573, 805, 808, 1147, 1462
BmcAI AGTACT 1 cut(s) 666
Bme1390I CCNGG 4 cut(s) 517, 1229, 1309, 1334
Bme18I GGWCC 2 cut(s) 15, 1368
BmgT120I GGNCC 3 cut(s) 15, 320, 1368
BmiI GGNNCC 1 cut(s) 1191
BmrFI CCNGG 4 cut(s) 517, 1229, 1309, 1334
BmsI GCATC 5 cut(s) 296, 558, 706, 921, 1542
BplI GAGNNNNNCTC 2 cut(s) 1275, 1307
Bpu1102I GCTNAGC 1 cut(s) 1376
BpuEI CTTGAG 3 cut(s) 988, 1158, 1547
BpuMI CCSGG 3 cut(s) 517, 1229, 1309
Bsa29I ATCGAT 1 cut(s) 1404
BsaHI GRCGYC 2 cut(s) 635, 1190
BsaJI CCNNGG 2 cut(s) 393, 1227
Bsc4I CCNNNNNNNGG 1 cut(s) 412
Bse1I ACTGG 2 cut(s) 384, 1547
Bse3DI GCAATG 3 cut(s) 96, 234, 1155
BseBI CCWGG 1 cut(s) 1334
BseCI ATCGAT 1 cut(s) 1404
BseDI CCNNGG 2 cut(s) 393, 1227
BseGI GGATG 5 cut(s) 180, 1011, 1071, 1087, 1557
BseLI CCNNNNNNNGG 1 cut(s) 412
BseMI GCAATG 3 cut(s) 96, 234, 1155
BseMII CTCAG 3 cut(s) 77, 330, 1367
BseNI ACTGG 2 cut(s) 384, 1547
BseRI GAGGAG 1 cut(s) 1094
BseXI GCAGC 6 cut(s) 321, 461, 464, 790, 818, 1157
BseYI CCCAGC 1 cut(s) 736
BsgI GTGCAG 1 cut(s) 920
Bsh1236I CGCG 1 cut(s) 1344
BshFI GGCC 3 cut(s) 322, 574, 1498
BshNI GGYRCC 1 cut(s) 1189
BshVI ATCGAT 1 cut(s) 1404
BsiHKAI GWGCWC 3 cut(s) 595, 839, 1293
BsiSI CCGG 3 cut(s) 517, 1229, 1308
BslFI GGGAC 3 cut(s) 131, 436, 1222
BslI CCNNNNNNNGG 1 cut(s) 412
BsmAI GTCTC 1 cut(s) 1560
BsmBI CGTCTC 1 cut(s) 1560
BsmFI GGGAC 3 cut(s) 131, 436, 1222
BsnI GGCC 3 cut(s) 322, 574, 1498
Bsp1286I GDGCHC 3 cut(s) 595, 839, 1293
Bsp143I GATC 5 cut(s) 163, 276, 1401, 1405, 1416
Bsp1720I GCTNAGC 1 cut(s) 1376
Bsp68I TCGCGA 1 cut(s) 1344
BspACI CCGC 4 cut(s) 545, 571, 845, 1460
BspANI GGCC 3 cut(s) 322, 574, 1498
BspCNI CTCAG 3 cut(s) 78, 329, 1368
BspDI ATCGAT 1 cut(s) 1404
BspFNI CGCG 1 cut(s) 1344
BspHI TCATGA 2 cut(s) 712, 1048
BspLI GGNNCC 1 cut(s) 1191
BspMAI CTGCAG 1 cut(s) 808
BspMI ACCTGC 1 cut(s) 199
BspPI GGATC 3 cut(s) 158, 284, 1400
BspQI GCTCTTC 1 cut(s) 583
BspT107I GGYRCC 1 cut(s) 1189
BsrDI GCAATG 3 cut(s) 96, 234, 1155
BsrI ACTGG 2 cut(s) 384, 1547
BssECI CCNNGG 2 cut(s) 393, 1227
BssMI GATC 5 cut(s) 163, 276, 1401, 1405, 1416
BssNI GRCGYC 2 cut(s) 635, 1190
Bst2UI CCWGG 1 cut(s) 1334
Bst4CI ACNGT 7 cut(s) 122, 394, 559, 648, 745, 834, 1061
Bst6I CTCTTC 4 cut(s) 26, 394, 583, 1431
BstACI GRCGYC 2 cut(s) 635, 1190
BstAPI GCANNNNNTGC 1 cut(s) 599
BstC8I GCNNGC 3 cut(s) 689, 936, 1465
BstDEI CTNAG 5 cut(s) 86, 316, 1222, 1351, 1376
BstDSI CCRYGG 1 cut(s) 393
BstEII GGTNACC 1 cut(s) 357
BstENI CCTNNNNNAGG 1 cut(s) 410
BstF5I GGATG 5 cut(s) 180, 1011, 1071, 1087, 1557
BstFNI CGCG 1 cut(s) 1344
BstH2I RGCGCY 1 cut(s) 1193
BstHHI GCGC 2 cut(s) 782, 1192
BstKTI GATC 5 cut(s) 166, 279, 1404, 1408, 1419
BstMAI GTCTC 1 cut(s) 1560
BstMBI GATC 5 cut(s) 163, 276, 1401, 1405, 1416
BstMWI GCNNNNNNNGC 5 cut(s) 435, 599, 632, 697, 706
BstNI CCWGG 1 cut(s) 1334
BstNSI RCATGY 1 cut(s) 372
BstPI GGTNACC 1 cut(s) 357
BstSCI CCNGG 4 cut(s) 515, 1227, 1307, 1332
BstSFI CTRYAG 2 cut(s) 555, 804
BstUI CGCG 1 cut(s) 1344
BstV1I GCAGC 6 cut(s) 321, 461, 464, 790, 818, 1157
BstXI CCANNNNNNTGG 3 cut(s) 211, 1205, 1542
Bsu15I ATCGAT 1 cut(s) 1404
BsuI GTATCC 1 cut(s) 1211
BsuRI GGCC 3 cut(s) 322, 574, 1498
BsuTUI ATCGAT 1 cut(s) 1404
BtgI CCRYGG 1 cut(s) 393
BtsCI GGATG 5 cut(s) 180, 1011, 1071, 1087, 1557
BtsIMutI CAGTG 3 cut(s) 127, 564, 750
BtuMI TCGCGA 1 cut(s) 1344
BveI ACCTGC 1 cut(s) 199
Cac8I GCNNGC 3 cut(s) 689, 936, 1465
CciI TCATGA 2 cut(s) 712, 1048
CfoI GCGC 2 cut(s) 782, 1192
Cfr13I GGNCC 3 cut(s) 15, 320, 1368
ClaI ATCGAT 1 cut(s) 1404
CseI GACGC 1 cut(s) 624
Csp6I GTAC 5 cut(s) 299, 665, 775, 1234, 1273
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviQI GTAC 5 cut(s) 299, 665, 775, 1234, 1273
DdeI CTNAG 5 cut(s) 86, 316, 1222, 1351, 1376
DinI GGCGCC 1 cut(s) 1191
DpnI GATC 5 cut(s) 165, 278, 1403, 1407, 1418
DpnII GATC 5 cut(s) 163, 276, 1401, 1405, 1416
EaeI YGGCCR 1 cut(s) 572
Eam1104I CTCTTC 4 cut(s) 26, 394, 583, 1431
EarI CTCTTC 4 cut(s) 26, 394, 583, 1431
EciI GGCGGA 1 cut(s) 534
Eco47I GGWCC 2 cut(s) 15, 1368
Eco57I CTGAAG 1 cut(s) 1538
Eco91I GGTNACC 1 cut(s) 357
EcoNI CCTNNNNNAGG 1 cut(s) 410
EcoO109I RGGNCCY 1 cut(s) 1368
EcoO65I GGTNACC 1 cut(s) 357
EcoRII CCWGG 1 cut(s) 1332
EgeI GGCGCC 1 cut(s) 1191
EheI GGCGCC 1 cut(s) 1191
Esp3I CGTCTC 1 cut(s) 1560
FaqI GGGAC 3 cut(s) 131, 436, 1222
FauNDI CATATG 2 cut(s) 1279, 1388
Fnu4HI GCNGC 8 cut(s) 310, 450, 453, 572, 804, 807, 1146, 1461
FokI GGATG 5 cut(s) 167, 1018, 1058, 1094, 1564
Fsp4HI GCNGC 8 cut(s) 310, 450, 453, 572, 804, 807, 1146, 1461
FspBI CTAG 3 cut(s) 585, 1295, 1491
GlaI GCGC 2 cut(s) 781, 1191
GluI GCNGC 8 cut(s) 310, 450, 453, 572, 804, 807, 1146, 1461
GsaI CCCAGC 1 cut(s) 740
HaeII RGCGCY 1 cut(s) 1193
HaeIII GGCC 3 cut(s) 322, 574, 1498
HapII CCGG 3 cut(s) 517, 1229, 1308
HgaI GACGC 1 cut(s) 624
HhaI GCGC 2 cut(s) 782, 1192
Hin1I GRCGYC 2 cut(s) 635, 1190
Hin6I GCGC 2 cut(s) 780, 1190
HinP1I GCGC 2 cut(s) 780, 1190
HindIII AAGCTT 2 cut(s) 964, 1348
HinfI GANTC 6 cut(s) 155, 242, 402, 1052, 1321, 1339
HpaII CCGG 3 cut(s) 517, 1229, 1308
HphI GGTGA 4 cut(s) 394, 809, 1297, 1322
Hpy166II GTNNAC 3 cut(s) 761, 775, 1273
Hpy188I TCNGA 7 cut(s) 54, 61, 87, 256, 640, 1135, 1401
Hpy188III TCNNGA 8 cut(s) 143, 274, 713, 857, 1049, 1343, 1491, 1611
Hpy8I GTNNAC 3 cut(s) 761, 775, 1273
HpyAV CCTTC 4 cut(s) 558, 671, 1055, 1488
HpyCH4III ACNGT 7 cut(s) 122, 394, 559, 648, 745, 834, 1061
HpyCH4IV ACGT 3 cut(s) 1211, 1396, 1581
HpyF10VI GCNNNNNNNGC 5 cut(s) 435, 599, 632, 697, 706
HpyF3I CTNAG 5 cut(s) 86, 316, 1222, 1351, 1376
HpySE526I ACGT 3 cut(s) 1211, 1396, 1581
Hsp92I GRCGYC 2 cut(s) 635, 1190
HspAI GCGC 2 cut(s) 780, 1190
KasI GGCGCC 1 cut(s) 1189
Kzo9I GATC 5 cut(s) 163, 276, 1401, 1405, 1416
LguI GCTCTTC 1 cut(s) 583
LmnI GCTCC 2 cut(s) 1142, 1296
Lsp1109I GCAGC 6 cut(s) 321, 461, 464, 790, 818, 1157
LweI GCATC 5 cut(s) 296, 558, 706, 921, 1542
MaeI CTAG 3 cut(s) 585, 1295, 1491
MaeII ACGT 3 cut(s) 1211, 1396, 1581
MaeIII GTNAC 4 cut(s) 357, 1152, 1521, 1582
MalI GATC 5 cut(s) 165, 278, 1403, 1407, 1418
MboI GATC 5 cut(s) 163, 276, 1401, 1405, 1416
MboII GAAGA 8 cut(s) 40, 43, 200, 411, 456, 600, 1448, 1479
MfeI CAATTG 2 cut(s) 939, 1114
MhlI GDGCHC 3 cut(s) 595, 839, 1293
MluCI AATT 7 cut(s) 42, 64, 257, 727, 939, 976, 1114
Mly113I GGCGCC 1 cut(s) 1190
MlyI GAGTC 1 cut(s) 411
MmeI TCCRAC 3 cut(s) 244, 389, 1017
MroXI GAANNNNTTC 2 cut(s) 81, 1320
MseI TTAA 4 cut(s) 260, 536, 980, 1547
MslI CAYNNNNRTG 2 cut(s) 183, 1080
MspA1I CMGCKG 2 cut(s) 809, 845
MspI CCGG 3 cut(s) 517, 1229, 1308
MspR9I CCNGG 4 cut(s) 517, 1229, 1309, 1334
MunI CAATTG 2 cut(s) 939, 1114
MvaI CCWGG 1 cut(s) 1334
MvnI CGCG 1 cut(s) 1344
MwoI GCNNNNNNNGC 5 cut(s) 435, 599, 632, 697, 706
NarI GGCGCC 1 cut(s) 1190
NciI CCSGG 3 cut(s) 517, 1229, 1309
NdeI CATATG 2 cut(s) 1279, 1388
NdeII GATC 5 cut(s) 163, 276, 1401, 1405, 1416
NlaIV GGNNCC 1 cut(s) 1191
NruI TCGCGA 1 cut(s) 1344
NspI RCATGY 1 cut(s) 372
PagI TCATGA 2 cut(s) 712, 1048
PaqCI CACCTGC 1 cut(s) 199
PciSI GCTCTTC 1 cut(s) 583
PdmI GAANNNNTTC 2 cut(s) 81, 1320
PfeI GAWTC 5 cut(s) 155, 242, 1052, 1321, 1339
PkrI GCNGC 8 cut(s) 311, 451, 454, 573, 805, 808, 1147, 1462
PleI GAGTC 1 cut(s) 410
PluTI GGCGCC 1 cut(s) 1193
PpsI GAGTC 1 cut(s) 410
PpuMI RGGWCCY 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 1368
Psp6I CCWGG 1 cut(s) 1332
PspEI GGTNACC 1 cut(s) 357
PspFI CCCAGC 1 cut(s) 736
PspGI CCWGG 1 cut(s) 1332
PspN4I GGNNCC 1 cut(s) 1191
PspPI GGNCC 3 cut(s) 15, 320, 1368
PspPPI RGGWCCY 1 cut(s) 1368
PstI CTGCAG 1 cut(s) 808
PvuII CAGCTG 1 cut(s) 809
RruI TCGCGA 1 cut(s) 1344
RsaI GTAC 5 cut(s) 300, 666, 776, 1235, 1274
RsaNI GTAC 5 cut(s) 299, 665, 775, 1234, 1273
RseI CAYNNNNRTG 2 cut(s) 183, 1080
SapI GCTCTTC 1 cut(s) 583
SaqAI TTAA 4 cut(s) 260, 536, 980, 1547
SatI GCNGC 8 cut(s) 310, 450, 453, 572, 804, 807, 1146, 1461
Sau3AI GATC 5 cut(s) 163, 276, 1401, 1405, 1416
Sau96I GGNCC 3 cut(s) 15, 320, 1368
ScaI AGTACT 1 cut(s) 666
SchI GAGTC 1 cut(s) 411
ScrFI CCNGG 4 cut(s) 517, 1229, 1309, 1334
SduI GDGCHC 3 cut(s) 595, 839, 1293
SfaNI GCATC 5 cut(s) 296, 558, 706, 921, 1542
SfcI CTRYAG 2 cut(s) 555, 804
SfoI GGCGCC 1 cut(s) 1191
SinI GGWCC 2 cut(s) 15, 1368
SmiMI CAYNNNNRTG 2 cut(s) 183, 1080
SmlI CTYRAG 3 cut(s) 967, 1173, 1526
SmoI CTYRAG 3 cut(s) 967, 1173, 1526
Sse9I AATT 7 cut(s) 42, 64, 257, 727, 939, 976, 1114
SsiI CCGC 4 cut(s) 545, 571, 845, 1460
SspDI GGCGCC 1 cut(s) 1189
SspMI CTAG 3 cut(s) 585, 1295, 1491
StyD4I CCNGG 4 cut(s) 515, 1227, 1307, 1332
TaaI ACNGT 7 cut(s) 122, 394, 559, 648, 745, 834, 1061
TaiI ACGT 3 cut(s) 1214, 1399, 1584
TaqI TCGA 4 cut(s) 26, 856, 1404, 1419
TaqII GACCGA 1 cut(s) 38
TasI AATT 7 cut(s) 42, 64, 257, 727, 939, 976, 1114
TatI WGTACW 5 cut(s) 298, 664, 774, 1233, 1272
TauI GCSGC 2 cut(s) 574, 1463
TfiI GAWTC 5 cut(s) 155, 242, 1052, 1321, 1339
Tru1I TTAA 4 cut(s) 260, 536, 980, 1547
Tru9I TTAA 4 cut(s) 260, 536, 980, 1547
TscAI CASTG 3 cut(s) 127, 564, 750
TseI GCWGC 6 cut(s) 309, 449, 452, 803, 806, 1145
TspDTI ATGAA 9 cut(s) 125, 201, 401, 701, 896, 1022, 1037, 1272, 1520
TspRI CASTG 3 cut(s) 127, 564, 750
VpaK11BI GGWCC 2 cut(s) 15, 1368
XagI CCTNNNNNAGG 1 cut(s) 410
XapI RAATTY 1 cut(s) 976
XbaI TCTAGA 1 cut(s) 1490
XceI RCATGY 1 cut(s) 372
XmnI GAANNNNTTC 2 cut(s) 81, 1320
XspI CTAG 3 cut(s) 585, 1295, 1491
ZrmI AGTACT 1 cut(s) 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.