Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005899

Physical Location & Seq

Genomic Coordinates Forward (+)

17251459 .. 17257845

Gene Structure 6387 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0124800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGCGGATTCAGACCCCAAAAGAGCGAAGGCGGAGGAGGCCGTGCTCCGATATCTAGAGAACAACTCCGATATCTCGGACTCTCATCTGTTCGCAGCCCAAGCCAAACTCAACCACGACGACATCGCCAATGCTATTAAGAGTCTCACTGGTCACAGATACGTTGACTCTCAGGAGATTACAAAGGAGACATGGTTGCTCACCGAGGAAGGGAAGACATATGCTGTTCATGGAACGCCAGAAGTGCGGCTCTTCCTGTCCATACCGCATGAGGGCATCACGAAAGATGAATTGCAGAAAAAGTTTGATGCATCGATTTTCAAAATAGCTTGCGCCCAGGCTGCAAAGAATAAATGGGTGGACTTTGGAAAGCAACTAGTGACCAGAAAGATCCAACATGTGGATAATGACAAGGTCCAAACTTTGCTTCTACGGATACAGGACGCAAAGGAAATTCAGGACATCAGCCAAGATGACATCAAGGCTCTCACCAAAAGAAAGCTTATTTCTCTACAAGTGAAGAAAGGCTTTTCAGTAAGAAGAGGTCTCAATTATGCTCCTCAGAGAAAGAAAGTTGCTACAGATTTGACTCGAGATATGCTGCAGAGCGGTGATTGGAAAGATCTGGAGTACAAAGACTTTAACTTGAACGCTAAAGGTGCGCCTACTGAACGTGGTTGTCTTCATCCACTGCTGAAGGTACGGAAGCAATTGAAGGACATTTTCCTTCAAATGGGGTTTGGAGAGATGCCCACTAATAACTATGTCGAGAGCAGCTTCTGGAACTTTGATGCTCTTTTCCAGCCGCAACAACACCCTGCTCGTGATTCACATGATACATTCTTCCTGAAAGTTCCTTCAACTACAAAGGACCTTCCTGAAGATTATGTTGAGAGGGTGAAGCGTATACACGAGTCTGGTGGTCATCAGTCCAGGGGTTATGGATATGATTGGAAAAGAGAGGAAGCTGATAAGAATCTTCTGCGGACTCACACAACTGCTGTTTCCTCCAGGATGCTTTACAAGCTAGCACAGGATTGTGCACAGAAACCTTTCTCTCCCAAGAAGTACTTTTCTATAGATCGTGTTTTCAGAAATGAAGCAGTAGATCGAACACATCTTGCAGAGTTCCACCAAATAGAAGGTTTGATATGTGATCGAGGGCTTACTCTGGGCGACTTGATAGGAGTCCTCCAAGACTTCTTCTCACGGCTGGGCATGTCCGATCTGAAATTCAAACCAGCCTATAATCCATATACTGAGCCTAGCATGGAGATTTTCGGTTATCATAAAGGCTTTGGCAAGTATGTAGAAATTGGAAACTCTGGCATGTTCCGGCCTGAAATGTTGCTTCCTATGGGACTCCCAGAAGATGTCAGTGTTATTGCATGGGGCCTCTCCCTGGAAAGACCAACCATGATTCTCTATGGCATTGACAACATTCGAGATCTTTTTGGGCACAAGGTCGATCTAGGTCTCATCAAGAAAAACCCCATCTGTCGGATTGGATTAGAATCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

507

Amino Acids

58.03

Weight (kDa)

8.32

Isoelectric Point (pI)

39.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PheRS_DBD3	PF18553	79 - 134	4.5e-12	PheRS DNA binding domain 3
tRNA-synt_2d	PF01409	214 - 491	2.4e-88	tRNA synthetases class II core domain (F)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005899)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g15960 FvH4_2g15960 FvH4_2g15960
malus_domestica	MD05G1128600.v1.1
prunus_persica	Prupe.8G172700_v2.0.a1 Prupe.8G172700_v2.0.a1 Prupe.8G172700_v2.0.a1
pyrus_communis	pycom05g12450
rosa_chinensis	RchiOBHm_Chr6g0279501
rosa_laevigata	RLG00000013142 RLG00000013420
rosa_multiflora	Rmu_sc0004649.1_g000022 Rmu_sc0009253.1_g000001 Rmu_sc0027163.1_g000002
rosa_roxburghii	Rroxscaffold_7G00188870 Rroxscaffold_7G00192750
rosa_rugosa	Rorug06G0097700 Rorug06G0124800 Rorug06G0124900 Rorug06G0125000
rosa_samantha	Rh6AG209200 Rh6AG234000 Rh6BG213400 Rh6BG238200 Rh6CG216200 Rh6CG240300 Rh6DG231900
rosa_wichuraiana	Rw6G020410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	400
AccBSI	CCGCTC	1 cut(s)	609
AccI	GTMKAC	1 cut(s)	907
AciI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 806, 985
AclWI	GGATC	1 cut(s)	385
AcsI	RAATTY	2 cut(s)	453, 1232
AcuI	CTGAAG	2 cut(s)	716, 900
AfaI	GTAC	3 cut(s)	632, 702, 1070
AfiI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1500
AflIII	ACRYGT	1 cut(s)	397
AgsI	TTSAA	6 cut(s)	322, 649, 715, 731, 861, 1237
AhlI	ACTAGT	1 cut(s)	376
AjnI	CCWGG	4 cut(s)	336, 932, 1010, 1401
AjuI	GAANNNNNNNTTGG	2 cut(s)	411, 443
AluBI	AGCT	5 cut(s)	329, 502, 777, 968, 1027
AluI	AGCT	5 cut(s)	329, 502, 777, 968, 1027
Alw21I	GWGCWC	2 cut(s)	48, 1045
Alw26I	GTCTC	4 cut(s)	149, 182, 551, 1481
Alw44I	GTGCAC	1 cut(s)	1041
AlwI	GGATC	1 cut(s)	385
AlwNI	CAGNNNCTG	1 cut(s)	780
Ama87I	CYCGRG	1 cut(s)	591
AoxI	GGCC	3 cut(s)	39, 1337, 1393
ApaLI	GTGCAC	1 cut(s)	1041
ApeKI	GCWGC	4 cut(s)	95, 341, 601, 774
ApoI	RAATTY	2 cut(s)	453, 1232
Asp700I	GAANNNNTTC	1 cut(s)	1052
AspLEI	GCGC	2 cut(s)	335, 664
AspS9I	GGNCC	3 cut(s)	415, 871, 1393
AsuHPI	GGTGA	4 cut(s)	193, 481, 623, 910
AsuNHI	GCTAGC	1 cut(s)	1027
AvaI	CYCGRG	1 cut(s)	591
AvaII	GGWCC	2 cut(s)	415, 871
BaeGI	GKGCMC	2 cut(s)	1045, 1461
BauI	CACGAG	2 cut(s)	822, 911
BbsI	GAAGAC	2 cut(s)	221, 674
Bbv12I	GWGCWC	2 cut(s)	48, 1045
BbvI	GCAGC	4 cut(s)	107, 328, 588, 786
BccI	CCATC	1 cut(s)	1502
BceAI	ACGGC	2 cut(s)	26, 1226
BciT130I	CCWGG	4 cut(s)	338, 934, 1012, 1403
BciVI	GTATCC	1 cut(s)	429
BcoDI	GTCTC	4 cut(s)	149, 182, 551, 1481
BcuI	ACTAGT	1 cut(s)	376
BfaI	CTAG	5 cut(s)	56, 377, 1028, 1266, 1472
BfmI	CTRYAG	3 cut(s)	579, 602, 1077
BfuI	GTATCC	1 cut(s)	429
BglII	AGATCT	2 cut(s)	622, 1447
BisI	GCNGC	6 cut(s)	96, 248, 342, 602, 775, 806
BlsI	GCNGC	6 cut(s)	97, 249, 343, 603, 776, 807
BmcAI	AGTACT	1 cut(s)	1070
Bme1390I	CCNGG	4 cut(s)	338, 934, 1012, 1403
Bme18I	GGWCC	2 cut(s)	415, 871
BmeT110I	CYCGRG	1 cut(s)	591
BmgT120I	GGNCC	3 cut(s)	415, 871, 1393
BmiI	GGNNCC	1 cut(s)	1394
BmrFI	CCNGG	4 cut(s)	338, 934, 1012, 1403
BmsI	GCATC	6 cut(s)	285, 298, 320, 738, 781, 1005
BmtI	GCTAGC	1 cut(s)	1031
BpiI	GAAGAC	2 cut(s)	221, 674
BplI	GAGNNNNNCTC	2 cut(s)	50, 82
BpmI	CTGGAG	2 cut(s)	647, 994
Bsa29I	ATCGAT	1 cut(s)	314
BsaBI	GATNNNNATC	2 cut(s)	975, 1513
BsaI	GGTCTC	2 cut(s)	551, 1481
BsaJI	CCNNGG	4 cut(s)	204, 336, 933, 1401
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1500
Bse1I	ACTGG	1 cut(s)	154
Bse8I	GATNNNNATC	2 cut(s)	975, 1513
BseBI	CCWGG	4 cut(s)	338, 934, 1012, 1403
BseCI	ATCGAT	1 cut(s)	314
BseDI	CCNNGG	4 cut(s)	204, 336, 933, 1401
BseGI	GGATG	2 cut(s)	685, 1020
BseJI	GATNNNNATC	2 cut(s)	975, 1513
BseLI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1500
BseMII	CTCAG	3 cut(s)	185, 575, 1251
BseNI	ACTGG	1 cut(s)	154
BseRI	GAGGAG	2 cut(s)	50, 549
BseSI	GKGCMC	2 cut(s)	1045, 1461
BseXI	GCAGC	4 cut(s)	107, 328, 588, 786
BseYI	CCCAGC	1 cut(s)	1213
BshFI	GGCC	3 cut(s)	41, 1339, 1395
BshVI	ATCGAT	1 cut(s)	314
BsiHKAI	GWGCWC	2 cut(s)	48, 1045
BsiHKCI	CYCGRG	1 cut(s)	591
BsiSI	CCGG	1 cut(s)	1336
BslFI	GGGAC	1 cut(s)	1374
BslI	CCNNNNNNNGG	6 cut(s)	210, 272, 400, 733, 1402, 1500
BsmAI	GTCTC	4 cut(s)	149, 182, 551, 1481
BsmFI	GGGAC	1 cut(s)	1374
BsnI	GGCC	3 cut(s)	41, 1339, 1395
Bso31I	GGTCTC	2 cut(s)	551, 1481
BsoBI	CYCGRG	1 cut(s)	591
Bsp1286I	GDGCHC	3 cut(s)	48, 1045, 1461
Bsp143I	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
BspACI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 806, 985
BspANI	GGCC	3 cut(s)	41, 1339, 1395
BspCNI	CTCAG	3 cut(s)	184, 574, 1252
BspDI	ATCGAT	1 cut(s)	314
BspLI	GGNNCC	1 cut(s)	1394
BspMAI	CTGCAG	1 cut(s)	606
BspOI	GCTAGC	1 cut(s)	1031
BspPI	GGATC	1 cut(s)	385
BspQI	GCTCTTC	1 cut(s)	257
BspTNI	GGTCTC	2 cut(s)	551, 1481
BsrBI	CCGCTC	1 cut(s)	609
BsrI	ACTGG	1 cut(s)	154
BssECI	CCNNGG	4 cut(s)	204, 336, 933, 1401
BssMI	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
BssNAI	GTATAC	1 cut(s)	908
BssSI	CACGAG	2 cut(s)	822, 911
Bst1107I	GTATAC	1 cut(s)	908
Bst2BI	CACGAG	2 cut(s)	822, 911
Bst2UI	CCWGG	4 cut(s)	338, 934, 1012, 1403
Bst6I	CTCTTC	2 cut(s)	257, 535
BstC8I	GCNNGC	2 cut(s)	331, 1029
BstDEI	CTNAG	3 cut(s)	171, 561, 1260
BstF5I	GGATG	2 cut(s)	685, 1020
BstHHI	GCGC	2 cut(s)	335, 664
BstKTI	GATC	8 cut(s)	393, 625, 1084, 1111, 1159, 1228, 1450, 1471
BstMAI	GTCTC	4 cut(s)	149, 182, 551, 1481
BstMBI	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
BstMWI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 341, 659, 1024
BstNI	CCWGG	4 cut(s)	338, 934, 1012, 1403
BstNSI	RCATGY	3 cut(s)	401, 1222, 1333
BstSCI	CCNGG	4 cut(s)	336, 932, 1010, 1401
BstSFI	CTRYAG	3 cut(s)	579, 602, 1077
BstSLI	GKGCMC	2 cut(s)	1045, 1461
BstV1I	GCAGC	4 cut(s)	107, 328, 588, 786
BstV2I	GAAGAC	2 cut(s)	221, 674
BstX2I	RGATCY	3 cut(s)	390, 622, 1447
BstYI	RGATCY	3 cut(s)	390, 622, 1447
BstZ17I	GTATAC	1 cut(s)	908
Bsu15I	ATCGAT	1 cut(s)	314
BsuI	GTATCC	1 cut(s)	429
BsuRI	GGCC	3 cut(s)	41, 1339, 1395
BsuTUI	ATCGAT	1 cut(s)	314
BtgZI	GCGATG	1 cut(s)	109
BtsCI	GGATG	2 cut(s)	685, 1020
BtsI	GCAGTG	1 cut(s)	689
BtsIMutI	CAGTG	3 cut(s)	147, 689, 1384
Cac8I	GCNNGC	2 cut(s)	331, 1029
CaiI	CAGNNNCTG	1 cut(s)	780
CfoI	GCGC	2 cut(s)	335, 664
Cfr13I	GGNCC	3 cut(s)	415, 871, 1393
ClaI	ATCGAT	1 cut(s)	314
CseI	GACGC	1 cut(s)	452
Csp6I	GTAC	3 cut(s)	631, 701, 1069
CviQI	GTAC	3 cut(s)	631, 701, 1069
DdeI	CTNAG	3 cut(s)	171, 561, 1260
DpnI	GATC	8 cut(s)	392, 624, 1083, 1110, 1158, 1227, 1449, 1470
DpnII	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
Eam1104I	CTCTTC	2 cut(s)	257, 535
EarI	CTCTTC	2 cut(s)	257, 535
EciI	GGCGGA	2 cut(s)	20, 47
Eco31I	GGTCTC	2 cut(s)	551, 1481
Eco32I	GATATC	2 cut(s)	53, 73
Eco47I	GGWCC	2 cut(s)	415, 871
Eco57I	CTGAAG	2 cut(s)	716, 900
Eco88I	CYCGRG	1 cut(s)	591
EcoO109I	RGGNCCY	2 cut(s)	871, 1393
EcoRII	CCWGG	4 cut(s)	336, 932, 1010, 1401
EcoRV	GATATC	2 cut(s)	53, 73
EcoT22I	ATGCAT	1 cut(s)	313
FalI	AAGNNNNNCTT	4 cut(s)	512, 544, 1055, 1087
FaqI	GGGAC	1 cut(s)	1374
FauNDI	CATATG	1 cut(s)	220
FblI	GTMKAC	1 cut(s)	907
Fnu4HI	GCNGC	6 cut(s)	96, 248, 342, 602, 775, 806
FokI	GGATG	2 cut(s)	672, 1027
Fsp4HI	GCNGC	6 cut(s)	96, 248, 342, 602, 775, 806
FspBI	CTAG	5 cut(s)	56, 377, 1028, 1266, 1472
GlaI	GCGC	2 cut(s)	334, 663
GluI	GCNGC	6 cut(s)	96, 248, 342, 602, 775, 806
GsaI	CCCAGC	1 cut(s)	1217
GsuI	CTGGAG	2 cut(s)	647, 994
HaeIII	GGCC	3 cut(s)	41, 1339, 1395
HapII	CCGG	1 cut(s)	1336
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	2 cut(s)	335, 664
Hin6I	GCGC	2 cut(s)	333, 662
HinP1I	GCGC	2 cut(s)	333, 662
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	1 cut(s)	500
HpaII	CCGG	1 cut(s)	1336
HphI	GGTGA	4 cut(s)	193, 481, 623, 910
Hpy166II	GTNNAC	4 cut(s)	166, 361, 908, 1043
Hpy8I	GTNNAC	4 cut(s)	166, 361, 908, 1043
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	8 cut(s)	22, 203, 691, 709, 737, 867, 884, 1136
HpyCH4IV	ACGT	2 cut(s)	162, 673
HpyCH4V	TGCA	7 cut(s)	295, 311, 344, 604, 1043, 1124, 1388
HpyF10VI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 341, 659, 1024
HpyF3I	CTNAG	3 cut(s)	171, 561, 1260
HpySE526I	ACGT	2 cut(s)	162, 673
HspAI	GCGC	2 cut(s)	333, 662
Kzo9I	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
LguI	GCTCTTC	1 cut(s)	257
LmnI	GCTCC	2 cut(s)	51, 562
Lsp1109I	GCAGC	4 cut(s)	107, 328, 588, 786
LweI	GCATC	6 cut(s)	285, 298, 320, 738, 781, 1005
MaeI	CTAG	5 cut(s)	56, 377, 1028, 1266, 1472
MaeII	ACGT	2 cut(s)	162, 673
MaeIII	GTNAC	2 cut(s)	152, 379
MalI	GATC	8 cut(s)	392, 624, 1083, 1110, 1158, 1227, 1449, 1470
MbiI	CCGCTC	1 cut(s)	609
MboI	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
MfeI	CAATTG	1 cut(s)	710
MflI	RGATCY	3 cut(s)	390, 622, 1447
MhlI	GDGCHC	3 cut(s)	48, 1045, 1461
MluCI	AATT	6 cut(s)	290, 453, 550, 710, 1232, 1314
MlyI	GAGTC	8 cut(s)	74, 151, 161, 583, 923, 982, 1197, 1356
MmeI	TCCRAC	2 cut(s)	418, 1481
Mph1103I	ATGCAT	1 cut(s)	313
MroXI	GAANNNNTTC	1 cut(s)	1052
MseI	TTAA	3 cut(s)	138, 642, 1522
MspI	CCGG	1 cut(s)	1336
MspR9I	CCNGG	4 cut(s)	338, 934, 1012, 1403
MunI	CAATTG	1 cut(s)	710
MvaI	CCWGG	4 cut(s)	338, 934, 1012, 1403
MwoI	GCNNNNNNNGC	6 cut(s)	38, 101, 244, 341, 659, 1024
NdeI	CATATG	1 cut(s)	220
NdeII	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
NheI	GCTAGC	1 cut(s)	1027
NlaIV	GGNNCC	1 cut(s)	1394
NmuCI	GTSAC	2 cut(s)	152, 379
NsiI	ATGCAT	1 cut(s)	313
NspI	RCATGY	3 cut(s)	401, 1222, 1333
PaeR7I	CTCGAG	1 cut(s)	591
PciI	ACATGT	1 cut(s)	397
PciSI	GCTCTTC	1 cut(s)	257
PdmI	GAANNNNTTC	1 cut(s)	1052
PfeI	GAWTC	5 cut(s)	8, 827, 976, 1420, 1514
PflFI	GACNNNGTC	1 cut(s)	413
PflMI	CCANNNNNTGG	1 cut(s)	400
PfoI	TCCNGGA	1 cut(s)	1010
PkrI	GCNGC	6 cut(s)	97, 249, 343, 603, 776, 807
PleI	GAGTC	8 cut(s)	74, 150, 161, 583, 922, 982, 1196, 1356
PpsI	GAGTC	8 cut(s)	74, 150, 161, 583, 922, 982, 1196, 1356
PpuMI	RGGWCCY	1 cut(s)	871
PscI	ACATGT	1 cut(s)	397
Psp5II	RGGWCCY	1 cut(s)	871
Psp6I	CCWGG	4 cut(s)	336, 932, 1010, 1401
PspFI	CCCAGC	1 cut(s)	1213
PspGI	CCWGG	4 cut(s)	336, 932, 1010, 1401
PspN4I	GGNNCC	1 cut(s)	1394
PspPI	GGNCC	3 cut(s)	415, 871, 1393
PspPPI	RGGWCCY	1 cut(s)	871
PstI	CTGCAG	1 cut(s)	606
PstNI	CAGNNNCTG	1 cut(s)	780
PsuI	RGATCY	3 cut(s)	390, 622, 1447
PsyI	GACNNNGTC	1 cut(s)	413
RsaI	GTAC	3 cut(s)	632, 702, 1070
RsaNI	GTAC	3 cut(s)	631, 701, 1069
SapI	GCTCTTC	1 cut(s)	257
SaqAI	TTAA	3 cut(s)	138, 642, 1522
SatI	GCNGC	6 cut(s)	96, 248, 342, 602, 775, 806
Sau3AI	GATC	8 cut(s)	390, 622, 1081, 1108, 1156, 1225, 1447, 1468
Sau96I	GGNCC	3 cut(s)	415, 871, 1393
ScaI	AGTACT	1 cut(s)	1070
SchI	GAGTC	8 cut(s)	74, 151, 161, 583, 923, 982, 1197, 1356
ScrFI	CCNGG	4 cut(s)	338, 934, 1012, 1403
SduI	GDGCHC	3 cut(s)	48, 1045, 1461
SfaNI	GCATC	6 cut(s)	285, 298, 320, 738, 781, 1005
SfcI	CTRYAG	3 cut(s)	579, 602, 1077
Sfr274I	CTCGAG	1 cut(s)	591
SinI	GGWCC	2 cut(s)	415, 871
SlaI	CTCGAG	1 cut(s)	591
SmlI	CTYRAG	1 cut(s)	591
SmoI	CTYRAG	1 cut(s)	591
SpeI	ACTAGT	1 cut(s)	376
Sse9I	AATT	6 cut(s)	290, 453, 550, 710, 1232, 1314
SsiI	CCGC	7 cut(s)	5, 32, 247, 266, 609, 806, 985
SspMI	CTAG	5 cut(s)	56, 377, 1028, 1266, 1472
StyD4I	CCNGG	4 cut(s)	336, 932, 1010, 1401
TaiI	ACGT	2 cut(s)	165, 676
TaqI	TCGA	7 cut(s)	314, 592, 768, 1111, 1159, 1444, 1467
TasI	AATT	6 cut(s)	290, 453, 550, 710, 1232, 1314
TatI	WGTACW	2 cut(s)	630, 1068
TauI	GCSGC	2 cut(s)	250, 808
TfiI	GAWTC	5 cut(s)	8, 827, 976, 1420, 1514
Tru1I	TTAA	3 cut(s)	138, 642, 1522
Tru9I	TTAA	3 cut(s)	138, 642, 1522
TscAI	CASTG	3 cut(s)	154, 696, 1384
TseFI	GTSAC	2 cut(s)	152, 379
TseI	GCWGC	4 cut(s)	95, 341, 601, 774
Tsp45I	GTSAC	2 cut(s)	152, 379
TspDTI	ATGAA	4 cut(s)	218, 303, 674, 1113
TspGWI	ACGGA	2 cut(s)	448, 718
TspRI	CASTG	3 cut(s)	154, 696, 1384
Tth111I	GACNNNGTC	1 cut(s)	413
Van91I	CCANNNNNTGG	1 cut(s)	400
VneI	GTGCAC	1 cut(s)	1041
VpaK11BI	GGWCC	2 cut(s)	415, 871
XapI	RAATTY	2 cut(s)	453, 1232
XbaI	TCTAGA	1 cut(s)	55
XceI	RCATGY	3 cut(s)	401, 1222, 1333
XhoI	CTCGAG	1 cut(s)	591
XmiI	GTMKAC	1 cut(s)	907
XmnI	GAANNNNTTC	1 cut(s)	1052
XspI	CTAG	5 cut(s)	56, 377, 1028, 1266, 1472
ZrmI	AGTACT	1 cut(s)	1070
Zsp2I	ATGCAT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.