Rh6CG216200

Protein kinase domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
35933549 .. 35934020
472 bp
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UTR
Exon/CDS
Intron
Rh6CG216200.1

Sequence Viewer

Length: 351 bp
ATGAATAGTGTTGGAAGAATCTTATTTCAGAGGGAGGAAATTTGCCAACAAGGTTCTGTAAAGCGAATTACTAGAAGGGCACTCTCTTCTGCACATAAAAGAGTGGAGGTTTCCGATTTTGTGGCTCAAAAGCTGTTTCACAGATTGGCACTACTAGAAGCAGAAGGATCCAGCAGGCATTTTGCCTCCCAAGAGCTTTGCTATGCAACTAACAATTTCAGCTCTGACATGGTGATTAGAGAGGGTGGACCTACCAAGGTGTACCGAGCCCCTCTTGAAGATGGTCGAGCTGCAGCTGTGAAAGTTCTCAACCCACACACCATTCAGTTAGTGATCTTTTCCGTGAAGTAG

Protein Analysis

116

Amino Acids

13.01

Weight (kDa)

9.82

Isoelectric Point (pI)

36.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 162, 175
AcsI RAATTY 1 cut(s) 39
AfaI GTAC 1 cut(s) 263
AgsI TTSAA 1 cut(s) 278
AluBI AGCT 5 cut(s) 133, 196, 222, 290, 296
AluI AGCT 5 cut(s) 133, 196, 222, 290, 296
AlwI GGATC 2 cut(s) 162, 175
ApeKI GCWGC 2 cut(s) 290, 293
ApoI RAATTY 1 cut(s) 39
AspS9I GGNCC 1 cut(s) 248
AsuHPI GGTGA 1 cut(s) 244
AvaII GGWCC 1 cut(s) 248
BaeGI GKGCMC 1 cut(s) 82
BamHI GGATCC 1 cut(s) 167
BanII GRGCYC 1 cut(s) 271
BbvI GCAGC 2 cut(s) 277, 305
BccI CCATC 1 cut(s) 275
BfaI CTAG 2 cut(s) 72, 155
BfmI CTRYAG 1 cut(s) 291
BisI GCNGC 2 cut(s) 291, 294
BlsI GCNGC 2 cut(s) 292, 295
Bme18I GGWCC 1 cut(s) 248
BmgT120I GGNCC 1 cut(s) 248
BmiI GGNNCC 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 255
BseDI CCNNGG 1 cut(s) 255
BseSI GKGCMC 1 cut(s) 82
BseXI GCAGC 2 cut(s) 277, 305
BsgI GTGCAG 1 cut(s) 75
Bsp1286I GDGCHC 2 cut(s) 82, 271
Bsp143I GATC 2 cut(s) 167, 333
BspLI GGNNCC 1 cut(s) 169
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 2 cut(s) 162, 175
BssECI CCNNGG 1 cut(s) 255
BssMI GATC 2 cut(s) 167, 333
BssT1I CCWWGG 1 cut(s) 255
Bst6I CTCTTC 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 176
BstKTI GATC 2 cut(s) 170, 336
BstMBI GATC 2 cut(s) 167, 333
BstSFI CTRYAG 1 cut(s) 291
BstSLI GKGCMC 1 cut(s) 82
BstV1I GCAGC 2 cut(s) 277, 305
BstX2I RGATCY 1 cut(s) 167
BstYI RGATCY 1 cut(s) 167
Cac8I GCNNGC 1 cut(s) 176
Cfr13I GGNCC 1 cut(s) 248
Csp6I GTAC 1 cut(s) 262
CviAII CATG 1 cut(s) 229
CviJI RGCY 7 cut(s) 125, 133, 196, 222, 269, 290, 296
CviKI_1 RGCY 7 cut(s) 125, 133, 196, 222, 269, 290, 296
CviQI GTAC 1 cut(s) 262
DpnI GATC 2 cut(s) 169, 335
DpnII GATC 2 cut(s) 167, 333
Eam1104I CTCTTC 1 cut(s) 91
EarI CTCTTC 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 255
Eco24I GRGCYC 1 cut(s) 271
Eco47I GGWCC 1 cut(s) 248
EcoT14I CCWWGG 1 cut(s) 255
EcoT38I GRGCYC 1 cut(s) 271
ErhI CCWWGG 1 cut(s) 255
FaeI CATG 1 cut(s) 232
FaiI YATR 3 cut(s) 96, 204, 230
FatI CATG 1 cut(s) 228
Fnu4HI GCNGC 2 cut(s) 291, 294
FriOI GRGCYC 1 cut(s) 271
Fsp4HI GCNGC 2 cut(s) 291, 294
FspBI CTAG 2 cut(s) 72, 155
GluI GCNGC 2 cut(s) 291, 294
Hin1II CATG 1 cut(s) 232
HinfI GANTC 1 cut(s) 18
HphI GGTGA 1 cut(s) 244
Hpy166II GTNNAC 2 cut(s) 248, 262
Hpy188I TCNGA 3 cut(s) 30, 115, 226
Hpy188III TCNNGA 1 cut(s) 275
Hpy8I GTNNAC 2 cut(s) 248, 262
HpyAV CCTTC 2 cut(s) 69, 158
HpyCH4V TGCA 3 cut(s) 92, 206, 293
Hsp92II CATG 1 cut(s) 232
Kzo9I GATC 2 cut(s) 167, 333
LpnPI CCDG 2 cut(s) 160, 184
Lsp1109I GCAGC 2 cut(s) 277, 305
MaeI CTAG 2 cut(s) 72, 155
MalI GATC 2 cut(s) 169, 335
MboI GATC 2 cut(s) 167, 333
MboII GAAGA 3 cut(s) 27, 78, 290
MflI RGATCY 1 cut(s) 167
MhlI GDGCHC 2 cut(s) 82, 271
MluCI AATT 3 cut(s) 39, 66, 214
MnlI CCTC 6 cut(s) 24, 28, 100, 196, 235, 282
MspA1I CMGCKG 1 cut(s) 296
NdeII GATC 2 cut(s) 167, 333
NlaIII CATG 1 cut(s) 232
NlaIV GGNNCC 1 cut(s) 169
PfeI GAWTC 1 cut(s) 18
PkrI GCNGC 2 cut(s) 292, 295
PspN4I GGNNCC 1 cut(s) 169
PspPI GGNCC 1 cut(s) 248
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 1 cut(s) 167
PvuII CAGCTG 1 cut(s) 296
RsaI GTAC 1 cut(s) 263
RsaNI GTAC 1 cut(s) 262
SatI GCNGC 2 cut(s) 291, 294
Sau3AI GATC 2 cut(s) 167, 333
Sau96I GGNCC 1 cut(s) 248
SduI GDGCHC 2 cut(s) 82, 271
SetI ASST 9 cut(s) 55, 111, 135, 198, 224, 253, 261, 292, 298
SfcI CTRYAG 1 cut(s) 291
SinI GGWCC 1 cut(s) 248
Sse9I AATT 3 cut(s) 39, 66, 214
SspMI CTAG 2 cut(s) 72, 155
StyI CCWWGG 1 cut(s) 255
TaqI TCGA 1 cut(s) 286
TasI AATT 3 cut(s) 39, 66, 214
TfiI GAWTC 1 cut(s) 18
TseI GCWGC 2 cut(s) 290, 293
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 331
VpaK11BI GGWCC 1 cut(s) 248
XapI RAATTY 1 cut(s) 39
XspI CTAG 2 cut(s) 72, 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.