Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0002096

Physical Location & Seq

Genomic Coordinates Forward (+)

25264640 .. 25267796

Gene Structure 3157 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGAATCGCAACACGTCGGGACGCACCAAGGCGAGGAGGAGGACCACCAGGAGAAGTCGGTTTTCAAGATGGTAAGGGACAAGGCGAAGAAGATAAAGAACAAGCTCACAAAGCATGGTCAAGGCCATGAACACGAGGAAGATGGTGAAGATGGTGAAGAAAAAGGAGAAGACCTTGGAGTGCATGGTGCAACAACAACTGGAAGCCGTGCTACGGGGCAAGGAGACATTCCGAAGGTACCAATGGAAAAATTTGGAGACACGAAAGGAGCAGCGAAGCACGATGACGATCCCAAAGTGCCGCATTTGGAGAAGACTGATCCGATGAAGGATTGCGCACCCGCTGCAGGTCAACGCACTAGGCAAACTCATTCCGTTCAGCCAGGAGTGACACCCATGCACGACGAGGTACTCGAGCCTAGGCCAAATTACCATGCCTCGATGACGGAGTCTCTCGTTGGGCATGATCAAATTCCAAGCCAGAAGCCCAAAGTTGATTTCGGGAAAACGTCTGTAACGGGGGAAGCACCTAATGCCCCACAGAACACTCCCCTGCCTTCTTTGGGAGAGTACAAGTCCAAGGGTGCTGACCCAAGTCAAACTTTCATTTCTGGGAAAGAAGGGCATTTAGGTCAATCTAGGGAGCACACCCCTGTTTCTTCCCTTGGAGGAGATTACCAGAAAGCCAATATCACTGACCCAAGGCAGACTTCTGTTACTGGGAAAGAAGGGCATTTAGGTCAATCTAGGGAGCACACCCCTGTTTCTTCCCTTGGAGGAGATTACCAGAAAGCCAATGTCGCTGACCCAAGGCAGACTTCTGTTACTGGGAAAGAAGGGCATTCAGGTCAAACCAGGGTCCCTTTGCAATACCGGGGATTGGACGATCGCGCCCCTATTTCCTCTCATGGAGACTACCAGAAGACCAATGTTACAGACCCAAGTCATACTTCTGCTACCGGAAACGAAGGGCATTTCGGGCAGTCCGAGGTAAACTTGGACCGACCAAGAGGATTGGAGGAGGATCCAAATGCTCGTATGGCCGACCCTCGGGCGTTTACTCCTTCAAATGATCAGACTAAAGTTACTGATCCTACTAATGCTGGTGGCGATGAATTTGGAATTACGCAGATTCACCGCTCGTTTGATAAGATGAGCATCCATGCGGGAGATACCAAGCCGTCGAACCAGGGCAGTAGTTACACCGAGAAAGCTTCATCTGCCGCATCCACCATTGCTGGCAAGGCGACATCTGCGAAAAATGCTGTGGCTTCCACGTTAGGATATGGCGGAGGGAACAATGATCAACGTGAAGATGTTAATCCTTATGCTTCTTCTCCAGAAAATGATTCAACTAAATCAGGATTACACCATGATGTTGGAACAAATCAAAACTTGGGCACTGGAAGCCATGATCAATTTTCTCCTGAGCACCCACCGAACCAGGGCGGTAGTTACGCCGTTGCCGACAAGGCAATATCTGCTAAAAATGCCGTCGCTTCCAAGCTTGGATATGGAGGCGGGAACAATGATCAGCACGAATTTGTTAAGCCTCAGGCTTCCAGTTATCAAACTACAGGAACAGGACAAAATCTAAGCACTCCTGAGAATCCATCAAACCAGGGGAGCTATGCTGGGAAAATATCATCAGCCACTAATGCTATTGTCGATACAGCAATTTCTGCGAAAAACGTCGTCGCTTCCAAGCTAGGATATGGCGGCGACACTGACCAACAGCAACATGGAGATCACGCAGCCGTTGGGTCCGGATCAGCTGCACCTGAGCATCAGGGTAAGAGCATTACAGCCGCAGTTACTGAGAAGCCGACACCTGTCTCTGAGAAGGTTGCCGGGGCAGGGAGCACCCTGATGTCGAAGCTCCCCGGCAGTACAGGGACGGCGGGCAAAGAAGAAGTCCACCAGGGTACTGCTACTACCCGGGCTGAGTATGACAAAGCCGGGAAGGACAAAGGAGTTTCTGTGAAGGGCTATTTGTCTGAGAAGTTGAAGCCCGGTGAGGAGGACAGGGCGCCTTCTGAGGTCGTATCGGAAAGCCTGCATGAGCGTAAGGCCGAGCAGTCTCGGAGTGGTGCTCGGCCTGTCGGGAAAGTGACCGAGACCGAGGCGGTGACTCGGCAGTTGGGGCCGGATTATGGGGCTGAGGATGTCCAGCAGTCTGGCTATGGGAAGGTTGTGGCGGATACGCTTAAAGGGGCTGTTGGTTCGTTGTTTGGGAAAGCTGATCAAACCACTGCTTCTCCAGAGTCCCGTGGTTCTTCAACTGGTACAGAGGGTTTCTCTAGTTCTGGCAGTGGAGTGGCGGAGCAACGAGGTCGCGGCGGTGTGGAGAAGCGGAGACTTGACGAGTCCGGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008150 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009608 GO:0009609 GO:0009611 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009743 GO:0009755 GO:0009987 GO:0010033 GO:0010035 GO:0010150 GO:0010555 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0042538 GO:0043207 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048511 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:1901700 GO:1901701 GO:1902074 GO:2000026 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAP160

Protein Analysis

793

Amino Acids

83.09

Weight (kDa)

5.96

Isoelectric Point (pI)

30.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LTI65_LTI78_N	PF23403	14 - 69	3.6e-11	LTI65/LTI78 CAP160 N-terminal
LTI65_LTI78_NYQTKV	PF23402	330 - 388	2.9e-23	LTI65/LTI78 NYQTKV repeat
CAP160	PF07918	406 - 431	6.5e-08	CAP160 repeat
CAP160	PF07918	487 - 507	5.6e-10	CAP160 repeat
CAP160	PF07918	548 - 574	2.8e-12	CAP160 repeat
LTI65_PGEED	PF23399	656 - 686	1e-14	LTI65/LTI78 PGEED repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25580 AT4G25580 AT5G52300 AT5G52300 AT5G52310
fragaria_vesca	FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29480 FvH4_7g29491
malus_domestica	MD01G1201000.v1.1 MD07G1268800.v1.1
prunus_persica	Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1 Prupe.2G294400_v2.0.a1
pyrus_communis	pycom07g24640
rosa_chinensis	RchiOBHm_Chr1g0377291 RchiOBHm_Chr1g0377331
rosa_laevigata	RLG00000026530
rosa_multiflora	Rmu_co8507117.1_g000001 Rmu_sc0001944.1_g000005 Rmu_sc0017163.1_g000001 Rmu_sc0022060.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281320 Rroxscaffold_4G00281330
rosa_rugosa	Rorug01G0402700
rosa_samantha	Rh1AG420000 Rh1AG420500 Rh1BG379000 Rh1BG379100 Rh1BG379200 Rh1BG379300 Rh1CG393000 Rh1CG393100 Rh1CG393200 Rh1CG393300 Rh1DG409600 Rh1DG409700 Rh1DG409800 Rh1DG410300
rosa_wichuraiana	Rw1G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	337
Acc36I	ACCTGC	1 cut(s)	338
Acc65I	GGTACC	1 cut(s)	238
AccB1I	GGYRCC	2 cut(s)	238, 2029
AccBSI	CCGCTC	1 cut(s)	1140
AccII	CGCG	2 cut(s)	891, 2337
AccIII	TCCGGA	1 cut(s)	1766
AclWI	GGATC	6 cut(s)	284, 314, 1019, 1032, 1085, 1777
AcoI	YGGCCR	1 cut(s)	1041
AcsI	RAATTY	4 cut(s)	251, 471, 1115, 1541
AcyI	GRCGYC	1 cut(s)	2030
AfaI	GTAC	6 cut(s)	240, 411, 572, 1891, 1927, 2287
AfiI	CCNNNNNNNGG	9 cut(s)	34, 214, 347, 563, 880, 1050, 1445, 1857, 2153
AflIII	ACRYGT	1 cut(s)	13
AgsI	TTSAA	5 cut(s)	67, 1068, 1353, 2008, 2280
AjiI	CACGTC	1 cut(s)	16
AjnI	CCWGG	7 cut(s)	48, 382, 854, 1188, 1443, 1620, 1920
AjuI	GAANNNNNNNTTGG	8 cut(s)	482, 514, 694, 726, 802, 834, 934, 966
AluBI	AGCT	8 cut(s)	106, 1214, 1507, 1629, 1708, 1775, 1879, 2240
AluI	AGCT	8 cut(s)	106, 1214, 1507, 1629, 1708, 1775, 1879, 2240
Alw21I	GWGCWC	5 cut(s)	648, 756, 1434, 1865, 2095
Alw26I	GTCTC	8 cut(s)	219, 252, 456, 906, 1840, 2085, 2111, 2350
AlwI	GGATC	6 cut(s)	284, 314, 1019, 1032, 1085, 1777
AlwNI	CAGNNNCTG	1 cut(s)	1817
Ama87I	CYCGRG	3 cut(s)	413, 1050, 1938
Aor13HI	TCCGGA	1 cut(s)	1766
AoxI	GGCC	6 cut(s)	124, 422, 1041, 2070, 2096, 2144
ApeKI	GCWGC	4 cut(s)	272, 344, 1754, 1775
ApoI	RAATTY	4 cut(s)	251, 471, 1115, 1541
ArsI	GACNNNNNNTTYG	2 cut(s)	1899, 1931
Asp718I	GGTACC	1 cut(s)	238
AspA2I	CCTAGG	1 cut(s)	419
AspLEI	GCGC	3 cut(s)	338, 893, 2032
AspS9I	GGNCC	5 cut(s)	43, 859, 1000, 1764, 2144
AsuC2I	CCSGG	8 cut(s)	875, 1852, 1884, 1939, 1940, 1960, 2013, 2371
AsuHPI	GGTGA	5 cut(s)	158, 167, 1127, 2027, 2140
AvaI	CYCGRG	3 cut(s)	413, 1050, 1938
AvaII	GGWCC	4 cut(s)	43, 859, 1000, 1764
AvrII	CCTAGG	1 cut(s)	419
AxyI	CCTNAGG	1 cut(s)	1554
BaeGI	GKGCMC	1 cut(s)	1403
BamHI	GGATCC	1 cut(s)	1024
BanI	GGYRCC	2 cut(s)	238, 2029
BarI	GAAGNNNNNNTAC	2 cut(s)	196, 228
BauI	CACGAG	1 cut(s)	134
BbsI	GAAGAC	3 cut(s)	177, 320, 929
Bbv12I	GWGCWC	5 cut(s)	648, 756, 1434, 1865, 2095
BbvCI	CCTCAGC	1 cut(s)	2160
BbvI	GCAGC	4 cut(s)	284, 331, 1762, 1766
BccI	CCATC	4 cut(s)	64, 137, 146, 1621
BceAI	ACGGC	6 cut(s)	192, 1165, 1445, 1478, 1742, 1914
BcgI	CGANNNNNNTGC	2 cut(s)	2315, 2349
BciT130I	CCWGG	7 cut(s)	50, 384, 856, 1190, 1445, 1622, 1922
BciVI	GTATCC	1 cut(s)	2194
BclI	TGATCA	6 cut(s)	466, 1072, 1303, 1414, 1531, 2242
BcnI	CCSGG	8 cut(s)	875, 1852, 1884, 1939, 1940, 1960, 2013, 2371
BcoDI	GTCTC	8 cut(s)	219, 252, 456, 906, 1840, 2085, 2111, 2350
BfaI	CTAG	6 cut(s)	360, 420, 639, 747, 1709, 2301
BfmI	CTRYAG	2 cut(s)	345, 1575
BfoI	RGCGCY	1 cut(s)	2033
BfuAI	ACCTGC	1 cut(s)	338
BfuI	GTATCC	1 cut(s)	2194
BglI	GCCNNNNNGGC	1 cut(s)	1472
BisI	GCNGC	9 cut(s)	273, 302, 345, 1224, 1720, 1755, 1776, 1809, 2338
BlnI	CCTAGG	1 cut(s)	419
BlsI	GCNGC	9 cut(s)	274, 303, 346, 1225, 1721, 1756, 1777, 1810, 2339
Bme18I	GGWCC	4 cut(s)	43, 859, 1000, 1764
BmeT110I	CYCGRG	3 cut(s)	413, 1050, 1938
BmgBI	CACGTC	1 cut(s)	16
BmgT120I	GGNCC	5 cut(s)	43, 859, 1000, 1764, 2144
BmiI	GGNNCC	7 cut(s)	240, 860, 861, 1026, 1765, 2031, 2145
BmrI	ACTGGG	2 cut(s)	729, 837
BmsI	GCATC	3 cut(s)	1167, 1235, 1795
BmuI	ACTGGG	2 cut(s)	729, 837
BoxI	GACNNNNGTC	3 cut(s)	594, 942, 1832
BpiI	GAAGAC	3 cut(s)	177, 320, 929
BplI	GAGNNNNNCTC	4 cut(s)	2077, 2109, 2282, 2314
BpmI	CTGGAG	2 cut(s)	1323, 2244
Bpu10I	CCTNAGC	3 cut(s)	1428, 1782, 2160
BpuMI	CCSGG	8 cut(s)	875, 1852, 1884, 1939, 1940, 1960, 2013, 2371
BsaBI	GATNNNNATC	3 cut(s)	288, 1157, 1320
BsaHI	GRCGYC	1 cut(s)	2030
BsaI	GGTCTC	1 cut(s)	2111
BsaWI	WCCGGW	2 cut(s)	959, 1766
BsaXI	ACNNNNNCTCC	4 cut(s)	1965, 1995, 2242, 2272
Bsc4I	CCNNNNNNNGG	9 cut(s)	34, 214, 347, 563, 880, 1050, 1445, 1857, 2153
Bse1I	ACTGG	6 cut(s)	205, 724, 832, 1408, 1563, 2287
Bse21I	CCTNAGG	1 cut(s)	1554
Bse3DI	GCAATG	1 cut(s)	1233
Bse8I	GATNNNNATC	3 cut(s)	288, 1157, 1320
BseAI	TCCGGA	1 cut(s)	1766
BseBI	CCWGG	7 cut(s)	50, 384, 856, 1190, 1445, 1622, 1922
BseGI	GGATG	3 cut(s)	1158, 1226, 2170
BseJI	GATNNNNATC	3 cut(s)	288, 1157, 1320
BseLI	CCNNNNNNNGG	9 cut(s)	34, 214, 347, 563, 880, 1050, 1445, 1857, 2153
BseMI	GCAATG	1 cut(s)	1233
BseNI	ACTGG	6 cut(s)	205, 724, 832, 1408, 1563, 2287
BseRI	GAGGAG	6 cut(s)	50, 53, 684, 792, 1034, 2033
BseSI	GKGCMC	1 cut(s)	1403
BseXI	GCAGC	4 cut(s)	284, 331, 1762, 1766
BseYI	CCCAGC	1 cut(s)	1634
BsgI	GTGCAG	1 cut(s)	1761
Bsh1236I	CGCG	2 cut(s)	891, 2337
Bsh1285I	CGRYCG	1 cut(s)	889
BshFI	GGCC	6 cut(s)	126, 424, 1043, 2072, 2098, 2146
BshNI	GGYRCC	2 cut(s)	238, 2029
BsiEI	CGRYCG	1 cut(s)	889
BsiHKAI	GWGCWC	5 cut(s)	648, 756, 1434, 1865, 2095
BsiHKCI	CYCGRG	3 cut(s)	413, 1050, 1938
BslFI	GGGAC	5 cut(s)	34, 92, 845, 1909, 2251
BslI	CCNNNNNNNGG	9 cut(s)	34, 214, 347, 563, 880, 1050, 1445, 1857, 2153
BsmAI	GTCTC	8 cut(s)	219, 252, 456, 906, 1840, 2085, 2111, 2350
BsmFI	GGGAC	5 cut(s)	34, 92, 845, 1909, 2251
BsmI	GAATGC	1 cut(s)	841
BsnI	GGCC	6 cut(s)	126, 424, 1043, 2072, 2098, 2146
Bso31I	GGTCTC	1 cut(s)	2111
BsoBI	CYCGRG	3 cut(s)	413, 1050, 1938
Bsp1286I	GDGCHC	6 cut(s)	648, 756, 1403, 1434, 1865, 2095
Bsp13I	TCCGGA	1 cut(s)	1766
BspANI	GGCC	6 cut(s)	126, 424, 1043, 2072, 2098, 2146
BspEI	TCCGGA	1 cut(s)	1766
BspFNI	CGCG	2 cut(s)	891, 2337
BspLI	GGNNCC	7 cut(s)	240, 860, 861, 1026, 1765, 2031, 2145
BspMAI	CTGCAG	1 cut(s)	349
BspMI	ACCTGC	1 cut(s)	338
BspPI	GGATC	6 cut(s)	284, 314, 1019, 1032, 1085, 1777
BspT107I	GGYRCC	2 cut(s)	238, 2029
BspTNI	GGTCTC	1 cut(s)	2111
BsrBI	CCGCTC	1 cut(s)	1140
BsrDI	GCAATG	1 cut(s)	1233
BsrI	ACTGG	6 cut(s)	205, 724, 832, 1408, 1563, 2287
BssNI	GRCGYC	1 cut(s)	2030
BssSI	CACGAG	1 cut(s)	134
BssT1I	CCWWGG	8 cut(s)	28, 175, 419, 579, 664, 701, 772, 809
Bst2BI	CACGAG	1 cut(s)	134
Bst2UI	CCWGG	7 cut(s)	50, 384, 856, 1190, 1445, 1622, 1922
BstACI	GRCGYC	1 cut(s)	2030
BstAPI	GCANNNNNTGC	4 cut(s)	344, 533, 1481, 1682
BstC8I	GCNNGC	3 cut(s)	1240, 1903, 2057
BstDSI	CCRYGG	1 cut(s)	2269
BstF5I	GGATG	3 cut(s)	1158, 1226, 2170
BstFNI	CGCG	2 cut(s)	891, 2337
BstH2I	RGCGCY	1 cut(s)	2033
BstHHI	GCGC	3 cut(s)	338, 893, 2032
BstMAI	GTCTC	8 cut(s)	219, 252, 456, 906, 1840, 2085, 2111, 2350
BstMCI	CGRYCG	1 cut(s)	889
BstNI	CCWGG	7 cut(s)	50, 384, 856, 1190, 1445, 1622, 1922
BstPAI	GACNNNNGTC	3 cut(s)	594, 942, 1832
BstSFI	CTRYAG	2 cut(s)	345, 1575
BstSLI	GKGCMC	1 cut(s)	1403
BstUI	CGCG	2 cut(s)	891, 2337
BstV1I	GCAGC	4 cut(s)	284, 331, 1762, 1766
BstV2I	GAAGAC	3 cut(s)	177, 320, 929
BstX2I	RGATCY	1 cut(s)	1024
BstXI	CCANNNNNNTGG	2 cut(s)	1379, 2177
BstYI	RGATCY	1 cut(s)	1024
Bsu36I	CCTNAGG	1 cut(s)	1554
BsuI	GTATCC	1 cut(s)	2194
BsuRI	GGCC	6 cut(s)	126, 424, 1043, 2072, 2098, 2146
BtgI	CCRYGG	1 cut(s)	2269
BtgZI	GCGATG	1 cut(s)	1125
BtrI	CACGTC	1 cut(s)	16
BtsCI	GGATG	3 cut(s)	1158, 1226, 2170
BtsI	GCAGTG	2 cut(s)	2250, 2317
BtsIMutI	CAGTG	5 cut(s)	693, 1401, 1725, 2250, 2317
BveI	ACCTGC	1 cut(s)	338
Cac8I	GCNNGC	3 cut(s)	1240, 1903, 2057
CaiI	CAGNNNCTG	1 cut(s)	1817
CfoI	GCGC	3 cut(s)	338, 893, 2032
Cfr13I	GGNCC	5 cut(s)	43, 859, 1000, 1764, 2144
Cfr9I	CCCGGG	1 cut(s)	1938
CseI	GACGC	1 cut(s)	31
Csp6I	GTAC	6 cut(s)	239, 410, 571, 1890, 1926, 2286
CviQI	GTAC	6 cut(s)	239, 410, 571, 1890, 1926, 2286
DinI	GGCGCC	1 cut(s)	2031
EaeI	YGGCCR	1 cut(s)	1041
EciI	GGCGGA	3 cut(s)	1305, 2213, 2336
Eco130I	CCWWGG	8 cut(s)	28, 175, 419, 579, 664, 701, 772, 809
Eco31I	GGTCTC	1 cut(s)	2111
Eco47I	GGWCC	4 cut(s)	43, 859, 1000, 1764
Eco81I	CCTNAGG	1 cut(s)	1554
Eco88I	CYCGRG	3 cut(s)	413, 1050, 1938
EcoO109I	RGGNCCY	1 cut(s)	859
EcoRII	CCWGG	7 cut(s)	48, 382, 854, 1188, 1443, 1620, 1920
EcoT14I	CCWWGG	8 cut(s)	28, 175, 419, 579, 664, 701, 772, 809
EgeI	GGCGCC	1 cut(s)	2031
EheI	GGCGCC	1 cut(s)	2031
ErhI	CCWWGG	8 cut(s)	28, 175, 419, 579, 664, 701, 772, 809
FalI	AAGNNNNNCTT	8 cut(s)	586, 618, 694, 726, 802, 834, 934, 966
FaqI	GGGAC	5 cut(s)	34, 92, 845, 1909, 2251
FauI	CCCGC	4 cut(s)	349, 1159, 1514, 1894
FbaI	TGATCA	6 cut(s)	466, 1072, 1303, 1414, 1531, 2242
Fnu4HI	GCNGC	9 cut(s)	273, 302, 345, 1224, 1720, 1755, 1776, 1809, 2338
FokI	GGATG	3 cut(s)	1145, 1213, 2177
Fsp4HI	GCNGC	9 cut(s)	273, 302, 345, 1224, 1720, 1755, 1776, 1809, 2338
FspBI	CTAG	6 cut(s)	360, 420, 639, 747, 1709, 2301
FspI	TGCGCA	1 cut(s)	337
GlaI	GCGC	3 cut(s)	337, 892, 2031
GluI	GCNGC	9 cut(s)	273, 302, 345, 1224, 1720, 1755, 1776, 1809, 2338
GsaI	CCCAGC	1 cut(s)	1638
GsuI	CTGGAG	2 cut(s)	1323, 2244
HaeII	RGCGCY	1 cut(s)	2033
HaeIII	GGCC	6 cut(s)	126, 424, 1043, 2072, 2098, 2146
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	3 cut(s)	338, 893, 2032
Hin1I	GRCGYC	1 cut(s)	2030
Hin6I	GCGC	3 cut(s)	336, 891, 2030
HinP1I	GCGC	3 cut(s)	336, 891, 2030
HincII	GTYRAC	1 cut(s)	353
HindII	GTYRAC	1 cut(s)	353
HindIII	AAGCTT	2 cut(s)	1212, 1505
HinfI	GANTC	8 cut(s)	5, 449, 1132, 1349, 1609, 2131, 2264, 2366
HphI	GGTGA	5 cut(s)	158, 167, 1127, 2027, 2140
Hpy166II	GTNNAC	4 cut(s)	353, 994, 1059, 1918
Hpy188I	TCNGA	9 cut(s)	234, 324, 988, 1077, 1840, 1999, 2038, 2050, 2085
Hpy8I	GTNNAC	4 cut(s)	353, 994, 1059, 1918
Hpy99I	CGWCG	6 cut(s)	20, 407, 1186, 1499, 1697, 1700
HpyCH4IV	ACGT	5 cut(s)	15, 509, 1277, 1309, 1692
HpyCH4V	TGCA	7 cut(s)	184, 191, 347, 400, 868, 1778, 2059
HpySE526I	ACGT	5 cut(s)	15, 509, 1277, 1309, 1692
Hsp92I	GRCGYC	1 cut(s)	2030
HspAI	GCGC	3 cut(s)	336, 891, 2030
KasI	GGCGCC	1 cut(s)	2029
KflI	GGGWCCC	1 cut(s)	859
Kpn2I	TCCGGA	1 cut(s)	1766
KpnI	GGTACC	1 cut(s)	242
Ksp22I	TGATCA	6 cut(s)	466, 1072, 1303, 1414, 1531, 2242
LmnI	GCTCC	7 cut(s)	269, 643, 751, 1626, 1860, 1884, 2323
Lsp1109I	GCAGC	4 cut(s)	284, 331, 1762, 1766
LweI	GCATC	3 cut(s)	1167, 1235, 1795
MaeI	CTAG	6 cut(s)	360, 420, 639, 747, 1709, 2301
MaeII	ACGT	5 cut(s)	15, 509, 1277, 1309, 1692
MbiI	CCGCTC	1 cut(s)	1140
MflI	RGATCY	1 cut(s)	1024
MhlI	GDGCHC	6 cut(s)	648, 756, 1403, 1434, 1865, 2095
MluCI	AATT	8 cut(s)	251, 427, 471, 1115, 1122, 1418, 1541, 1677
Mly113I	GGCGCC	1 cut(s)	2030
MlyI	GAGTC	4 cut(s)	458, 2125, 2273, 2375
MmeI	TCCRAC	1 cut(s)	1360
MroI	TCCGGA	1 cut(s)	1766
MseI	TTAA	3 cut(s)	1320, 1548, 2208
MslI	CAYNNNNRTG	2 cut(s)	1374, 1868
MspA1I	CMGCKG	2 cut(s)	344, 1775
Mva1269I	GAATGC	1 cut(s)	841
MvaI	CCWGG	7 cut(s)	50, 384, 856, 1190, 1445, 1622, 1922
MvnI	CGCG	2 cut(s)	891, 2337
NarI	GGCGCC	1 cut(s)	2030
NciI	CCSGG	8 cut(s)	875, 1852, 1884, 1939, 1940, 1960, 2013, 2371
NlaIV	GGNNCC	7 cut(s)	240, 860, 861, 1026, 1765, 2031, 2145
NmeAIII	GCCGAG	3 cut(s)	2074, 2098, 2113
NmuCI	GTSAC	3 cut(s)	388, 2110, 2128
NsbI	TGCGCA	1 cut(s)	337
PaeR7I	CTCGAG	1 cut(s)	413
PcsI	WCGNNNNNNNCGW	3 cut(s)	411, 984, 1464
PctI	GAATGC	1 cut(s)	841
PfeI	GAWTC	4 cut(s)	5, 1132, 1349, 1609
PflFI	GACNNNGTC	1 cut(s)	448
PfoI	TCCNGGA	1 cut(s)	2369
PkrI	GCNGC	9 cut(s)	274, 303, 346, 1225, 1721, 1756, 1777, 1810, 2339
Ple19I	CGATCG	1 cut(s)	889
PleI	GAGTC	4 cut(s)	457, 2125, 2272, 2374
PluTI	GGCGCC	1 cut(s)	2033
PpsI	GAGTC	4 cut(s)	457, 2125, 2272, 2374
PpuMI	RGGWCCY	1 cut(s)	859
PshAI	GACNNNNGTC	3 cut(s)	594, 942, 1832
Psp5II	RGGWCCY	1 cut(s)	859
Psp6I	CCWGG	7 cut(s)	48, 382, 854, 1188, 1443, 1620, 1920
PspFI	CCCAGC	1 cut(s)	1634
PspGI	CCWGG	7 cut(s)	48, 382, 854, 1188, 1443, 1620, 1920
PspN4I	GGNNCC	7 cut(s)	240, 860, 861, 1026, 1765, 2031, 2145
PspPI	GGNCC	5 cut(s)	43, 859, 1000, 1764, 2144
PspPPI	RGGWCCY	1 cut(s)	859
PspXI	VCTCGAGB	1 cut(s)	413
PstI	CTGCAG	1 cut(s)	349
PstNI	CAGNNNCTG	1 cut(s)	1817
PsuI	RGATCY	1 cut(s)	1024
PsyI	GACNNNGTC	1 cut(s)	448
PvuI	CGATCG	1 cut(s)	889
PvuII	CAGCTG	1 cut(s)	1775
RsaI	GTAC	6 cut(s)	240, 411, 572, 1891, 1927, 2287
RsaNI	GTAC	6 cut(s)	239, 410, 571, 1890, 1926, 2286
RseI	CAYNNNNRTG	2 cut(s)	1374, 1868
SaqAI	TTAA	3 cut(s)	1320, 1548, 2208
SatI	GCNGC	9 cut(s)	273, 302, 345, 1224, 1720, 1755, 1776, 1809, 2338
Sau96I	GGNCC	5 cut(s)	43, 859, 1000, 1764, 2144
SchI	GAGTC	4 cut(s)	458, 2125, 2273, 2375
SduI	GDGCHC	6 cut(s)	648, 756, 1403, 1434, 1865, 2095
SfaNI	GCATC	3 cut(s)	1167, 1235, 1795
SfcI	CTRYAG	2 cut(s)	345, 1575
SfoI	GGCGCC	1 cut(s)	2031
Sfr274I	CTCGAG	1 cut(s)	413
SinI	GGWCC	4 cut(s)	43, 859, 1000, 1764
SlaI	CTCGAG	1 cut(s)	413
SmaI	CCCGGG	1 cut(s)	1940
SmiMI	CAYNNNNRTG	2 cut(s)	1374, 1868
SmlI	CTYRAG	1 cut(s)	413
SmoI	CTYRAG	1 cut(s)	413
Sse9I	AATT	8 cut(s)	251, 427, 471, 1115, 1122, 1418, 1541, 1677
SspDI	GGCGCC	1 cut(s)	2029
SspMI	CTAG	6 cut(s)	360, 420, 639, 747, 1709, 2301
StyI	CCWWGG	8 cut(s)	28, 175, 419, 579, 664, 701, 772, 809
TaiI	ACGT	5 cut(s)	18, 512, 1280, 1312, 1695
TaqI	TCGA	5 cut(s)	414, 440, 1184, 1668, 1874
TaqII	GACCGA	3 cut(s)	1017, 2129, 2135
TasI	AATT	8 cut(s)	251, 427, 471, 1115, 1122, 1418, 1541, 1677
TatI	WGTACW	2 cut(s)	570, 1889
TauI	GCSGC	5 cut(s)	304, 1226, 1722, 1811, 2340
TfiI	GAWTC	4 cut(s)	5, 1132, 1349, 1609
Tru1I	TTAA	3 cut(s)	1320, 1548, 2208
Tru9I	TTAA	3 cut(s)	1320, 1548, 2208
TscAI	CASTG	5 cut(s)	700, 1408, 1732, 2257, 2317
TseFI	GTSAC	3 cut(s)	388, 2110, 2128
TseI	GCWGC	4 cut(s)	272, 344, 1754, 1775
Tsp45I	GTSAC	3 cut(s)	388, 2110, 2128
TspDTI	ATGAA	5 cut(s)	144, 341, 595, 1128, 1206
TspGWI	ACGGA	2 cut(s)	364, 461
TspMI	CCCGGG	1 cut(s)	1938
TspRI	CASTG	5 cut(s)	700, 1408, 1732, 2257, 2317
Tth111I	GACNNNGTC	1 cut(s)	448
VpaK11BI	GGWCC	4 cut(s)	43, 859, 1000, 1764
XapI	RAATTY	4 cut(s)	251, 471, 1115, 1541
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1739
XhoI	CTCGAG	1 cut(s)	413
XmaI	CCCGGG	1 cut(s)	1938
XmaJI	CCTAGG	1 cut(s)	419
XspI	CTAG	6 cut(s)	360, 420, 639, 747, 1709, 2301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.