pycom07g24680

Actin depolymerisation factor/cofilin -like domains

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
25306719 .. 25307479
761 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g24680.2

Sequence Viewer

Length: 444 bp
ATGTCATCGCTGCGTTATTCATTTTGTTTATTTGGTAATGCGGGAGGAACTAAATTTGCCAAGTGCTTCATCTGTAATGGGACTGGTCACTTGAGCAAGAACTGCCCTGAAAATACTCATGGGATTTATCCAAAGGGTGGTAGTTGCAAAATGTGTGGAGGTGTAACACATTTGGCGAAGGATTGTCCAAACAAAAGCAGCAGTTCAATGTCCGCTGGTAGATCTGCTCACTCATGGAAAGAAAGTGATCTTCCAAGAGGAAAGGTTACCAAATTTCTGAGTGGAGACGATCTTGAGGATGATTTCAGTTTCATAGATGAGAAGAAAAATGGCGTTACACAAGACAAGTCCGCTGGTACAGTCTGTCATGCTTCTCTTTCACAAGAAAGCACTGTAAAATCAAAGAAGAAACAAGGACCCAAAGTAGTGAATTTCGTTGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

148

Amino Acids

15.68

Weight (kDa)

9.13

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 137
AciI CCGC 3 cut(s) 41, 213, 351
AcsI RAATTY 3 cut(s) 53, 272, 430
AfaI GTAC 1 cut(s) 358
AfiI CCNNNNNNNGG 1 cut(s) 137
AgsI TTSAA 1 cut(s) 207
Alw26I GTCTC 1 cut(s) 279
ApeKI GCWGC 2 cut(s) 10, 198
ApoI RAATTY 3 cut(s) 53, 272, 430
AspS9I GGNCC 1 cut(s) 416
AvaII GGWCC 1 cut(s) 416
BbvI GCAGC 1 cut(s) 210
BcoDI GTCTC 1 cut(s) 279
BglII AGATCT 1 cut(s) 221
BisI GCNGC 2 cut(s) 11, 199
BlsI GCNGC 2 cut(s) 12, 200
Bme18I GGWCC 1 cut(s) 416
BmgT120I GGNCC 1 cut(s) 416
BmiI GGNNCC 1 cut(s) 418
BpuEI CTTGAG 2 cut(s) 112, 314
Bsc4I CCNNNNNNNGG 1 cut(s) 137
Bse1I ACTGG 1 cut(s) 88
BseGI GGATG 1 cut(s) 304
BseLI CCNNNNNNNGG 1 cut(s) 137
BseMII CTCAG 1 cut(s) 269
BseNI ACTGG 1 cut(s) 88
BseXI GCAGC 1 cut(s) 210
BslFI GGGAC 1 cut(s) 94
BslI CCNNNNNNNGG 1 cut(s) 137
BsmAI GTCTC 1 cut(s) 279
BsmBI CGTCTC 1 cut(s) 279
BsmFI GGGAC 1 cut(s) 94
Bsp143I GATC 3 cut(s) 221, 247, 289
BspACI CCGC 3 cut(s) 41, 213, 351
BspCNI CTCAG 1 cut(s) 270
BspLI GGNNCC 1 cut(s) 418
BsrI ACTGG 1 cut(s) 88
BssMI GATC 3 cut(s) 221, 247, 289
Bst4CI ACNGT 2 cut(s) 361, 394
BstAPI GCANNNNNTGC 1 cut(s) 102
BstDEI CTNAG 1 cut(s) 278
BstEII GGTNACC 1 cut(s) 265
BstF5I GGATG 1 cut(s) 304
BstKTI GATC 3 cut(s) 224, 250, 292
BstMAI GTCTC 1 cut(s) 279
BstMBI GATC 3 cut(s) 221, 247, 289
BstMWI GCNNNNNNNGC 1 cut(s) 102
BstPI GGTNACC 1 cut(s) 265
BstV1I GCAGC 1 cut(s) 210
BstX2I RGATCY 1 cut(s) 221
BstYI RGATCY 1 cut(s) 221
BtsCI GGATG 1 cut(s) 304
BtsIMutI CAGTG 1 cut(s) 390
Cfr13I GGNCC 1 cut(s) 416
Csp6I GTAC 1 cut(s) 357
CspCI CAANNNNNGTGG 2 cut(s) 136, 171
CviAII CATG 3 cut(s) 119, 234, 368
CviQI GTAC 1 cut(s) 357
DdeI CTNAG 1 cut(s) 278
DpnI GATC 3 cut(s) 223, 249, 291
DpnII GATC 3 cut(s) 221, 247, 289
Eco47I GGWCC 1 cut(s) 416
Eco91I GGTNACC 1 cut(s) 265
EcoO109I RGGNCCY 1 cut(s) 416
EcoO65I GGTNACC 1 cut(s) 265
Esp3I CGTCTC 1 cut(s) 279
FaeI CATG 3 cut(s) 122, 237, 371
FaiI YATR 4 cut(s) 120, 235, 314, 369
FaqI GGGAC 1 cut(s) 94
FatI CATG 3 cut(s) 118, 233, 367
FauI CCCGC 1 cut(s) 34
Fnu4HI GCNGC 2 cut(s) 11, 199
FokI GGATG 1 cut(s) 311
Fsp4HI GCNGC 2 cut(s) 11, 199
GluI GCNGC 2 cut(s) 11, 199
Hin1II CATG 3 cut(s) 122, 237, 371
Hpy188I TCNGA 1 cut(s) 279
Hpy188III TCNNGA 1 cut(s) 293
HpyAV CCTTC 1 cut(s) 172
HpyCH4III ACNGT 2 cut(s) 361, 394
HpyCH4V TGCA 1 cut(s) 147
HpyF10VI GCNNNNNNNGC 1 cut(s) 102
HpyF3I CTNAG 1 cut(s) 278
Hsp92II CATG 3 cut(s) 122, 237, 371
Kzo9I GATC 3 cut(s) 221, 247, 289
LpnPI CCDG 4 cut(s) 69, 120, 201, 339
Lsp1109I GCAGC 1 cut(s) 210
MaeIII GTNAC 4 cut(s) 86, 163, 265, 334
MalI GATC 3 cut(s) 223, 249, 291
MboI GATC 3 cut(s) 221, 247, 289
MboII GAAGA 3 cut(s) 242, 334, 418
MflI RGATCY 1 cut(s) 221
MluCI AATT 3 cut(s) 53, 272, 430
MmeI TCCRAC 1 cut(s) 418
MnlI CCTC 4 cut(s) 38, 152, 251, 289
MspA1I CMGCKG 2 cut(s) 215, 353
MwoI GCNNNNNNNGC 1 cut(s) 102
NdeII GATC 3 cut(s) 221, 247, 289
NlaIII CATG 3 cut(s) 122, 237, 371
NlaIV GGNNCC 1 cut(s) 418
NmuCI GTSAC 1 cut(s) 86
PflMI CCANNNNNTGG 1 cut(s) 137
PkrI GCNGC 2 cut(s) 12, 200
PpuMI RGGWCCY 1 cut(s) 416
Psp5II RGGWCCY 1 cut(s) 416
PspEI GGTNACC 1 cut(s) 265
PspN4I GGNNCC 1 cut(s) 418
PspPI GGNCC 1 cut(s) 416
PspPPI RGGWCCY 1 cut(s) 416
PsuI RGATCY 1 cut(s) 221
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
SatI GCNGC 2 cut(s) 11, 199
Sau3AI GATC 3 cut(s) 221, 247, 289
Sau96I GGNCC 1 cut(s) 416
SetI ASST 2 cut(s) 163, 267
SinI GGWCC 1 cut(s) 416
SmlI CTYRAG 2 cut(s) 91, 293
SmoI CTYRAG 2 cut(s) 91, 293
Sse9I AATT 3 cut(s) 53, 272, 430
SsiI CCGC 3 cut(s) 41, 213, 351
TaaI ACNGT 2 cut(s) 361, 394
TasI AATT 3 cut(s) 53, 272, 430
TscAI CASTG 1 cut(s) 397
TseFI GTSAC 1 cut(s) 86
TseI GCWGC 2 cut(s) 10, 198
Tsp45I GTSAC 1 cut(s) 86
TspDTI ATGAA 3 cut(s) 9, 58, 301
TspRI CASTG 1 cut(s) 397
Van91I CCANNNNNTGG 1 cut(s) 137
VpaK11BI GGWCC 1 cut(s) 416
XapI RAATTY 3 cut(s) 53, 272, 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.