ChaC-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31290 AT5G26220 AT5G26220 |
| fragaria_vesca | FvH4_2g36490 FvH4_3g36120 |
| malus_domestica | MD08G1124700.v1.1 MD15G1104100.v1.1 |
| prunus_persica | Prupe.1G456300_v2.0.a1 |
| pyrus_communis | pycom08g10340 pycom15g09450 pycom15g09490 |
| rosa_chinensis | RchiOBHm_Chr6g0305381 |
| rosa_laevigata | RLG00000010895 |
| rosa_multiflora | Rmu_co8139608.1_g000001 Rmu_sc0002782.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00162860 |
| rosa_rugosa | Rorug06G0340000 |
| rosa_samantha | Rh6BG449800 Rh6CG465800 |
| rosa_wichuraiana | Rw6G039360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 376, 412 |
| AccI | GTMKAC | 2 cut(s) | 51, 119 |
| AciI | CCGC | 3 cut(s) | 210, 374, 410 |
| AcoI | YGGCCR | 1 cut(s) | 354 |
| AfaI | GTAC | 1 cut(s) | 8 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 271 |
| AgsI | TTSAA | 1 cut(s) | 39 |
| AjiI | CACGTC | 1 cut(s) | 117 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 56, 88 |
| AluBI | AGCT | 1 cut(s) | 289 |
| AluI | AGCT | 1 cut(s) | 289 |
| Alw26I | GTCTC | 1 cut(s) | 216 |
| AoxI | GGCC | 5 cut(s) | 203, 262, 354, 359, 393 |
| ApaI | GGGCCC | 1 cut(s) | 207 |
| AspS9I | GGNCC | 5 cut(s) | 155, 203, 204, 359, 394 |
| AsuC2I | CCSGG | 3 cut(s) | 358, 392, 416 |
| AsuHPI | GGTGA | 1 cut(s) | 313 |
| AsuNHI | GCTAGC | 1 cut(s) | 289 |
| AvaII | GGWCC | 1 cut(s) | 155 |
| BaeGI | GKGCMC | 1 cut(s) | 207 |
| BanII | GRGCYC | 1 cut(s) | 207 |
| BccI | CCATC | 3 cut(s) | 334, 414, 431 |
| BcnI | CCSGG | 3 cut(s) | 358, 392, 416 |
| BcoDI | GTCTC | 1 cut(s) | 216 |
| BfaI | CTAG | 1 cut(s) | 290 |
| BmcAI | AGTACT | 1 cut(s) | 8 |
| Bme1390I | CCNGG | 3 cut(s) | 358, 392, 416 |
| Bme18I | GGWCC | 1 cut(s) | 155 |
| BmgBI | CACGTC | 1 cut(s) | 117 |
| BmgT120I | GGNCC | 5 cut(s) | 155, 203, 204, 359, 394 |
| BmiI | GGNNCC | 2 cut(s) | 156, 205 |
| BmrFI | CCNGG | 3 cut(s) | 358, 392, 416 |
| BmrI | ACTGGG | 1 cut(s) | 73 |
| BmtI | GCTAGC | 1 cut(s) | 293 |
| BmuI | ACTGGG | 1 cut(s) | 73 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 213, 245 |
| BpmI | CTGGAG | 2 cut(s) | 108, 188 |
| BpuEI | CTTGAG | 1 cut(s) | 362 |
| BpuMI | CCSGG | 3 cut(s) | 358, 392, 416 |
| BsaJI | CCNNGG | 1 cut(s) | 429 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 93, 106, 123, 136 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 271 |
| Bse118I | RCCGGY | 1 cut(s) | 323 |
| Bse1I | ACTGG | 2 cut(s) | 79, 171 |
| BseDI | CCNNGG | 1 cut(s) | 429 |
| BseGI | GGATG | 2 cut(s) | 387, 406 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BseMII | CTCAG | 1 cut(s) | 75 |
| BseNI | ACTGG | 2 cut(s) | 79, 171 |
| BseSI | GKGCMC | 1 cut(s) | 207 |
| BshFI | GGCC | 5 cut(s) | 205, 264, 356, 361, 395 |
| BsiSI | CCGG | 4 cut(s) | 324, 357, 392, 416 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BsmAI | GTCTC | 1 cut(s) | 216 |
| BsmI | GAATGC | 1 cut(s) | 29 |
| BsnI | GGCC | 5 cut(s) | 205, 264, 356, 361, 395 |
| Bsp120I | GGGCCC | 1 cut(s) | 203 |
| Bsp1286I | GDGCHC | 1 cut(s) | 207 |
| Bsp19I | CCATGG | 1 cut(s) | 429 |
| BspACI | CCGC | 3 cut(s) | 210, 374, 410 |
| BspANI | GGCC | 5 cut(s) | 205, 264, 356, 361, 395 |
| BspCNI | CTCAG | 1 cut(s) | 76 |
| BspLI | GGNNCC | 2 cut(s) | 156, 205 |
| BspOI | GCTAGC | 1 cut(s) | 293 |
| BsrBI | CCGCTC | 2 cut(s) | 376, 412 |
| BsrFI | RCCGGY | 1 cut(s) | 323 |
| BsrI | ACTGG | 2 cut(s) | 79, 171 |
| BssAI | RCCGGY | 1 cut(s) | 323 |
| BssECI | CCNNGG | 1 cut(s) | 429 |
| BssT1I | CCWWGG | 1 cut(s) | 429 |
| Bst6I | CTCTTC | 1 cut(s) | 264 |
| BstC8I | GCNNGC | 1 cut(s) | 291 |
| BstDEI | CTNAG | 1 cut(s) | 84 |
| BstDSI | CCRYGG | 1 cut(s) | 429 |
| BstF5I | GGATG | 2 cut(s) | 387, 406 |
| BstMAI | GTCTC | 1 cut(s) | 216 |
| BstSCI | CCNGG | 3 cut(s) | 356, 390, 414 |
| BstSLI | GKGCMC | 1 cut(s) | 207 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 430 |
| BsuRI | GGCC | 5 cut(s) | 205, 264, 356, 361, 395 |
| BtgI | CCRYGG | 1 cut(s) | 429 |
| BtgZI | GCGATG | 1 cut(s) | 409 |
| BtrI | CACGTC | 1 cut(s) | 117 |
| BtsCI | GGATG | 2 cut(s) | 387, 406 |
| BtsIMutI | CAGTG | 1 cut(s) | 164 |
| Cac8I | GCNNGC | 1 cut(s) | 291 |
| Cfr10I | RCCGGY | 1 cut(s) | 323 |
| Cfr13I | GGNCC | 5 cut(s) | 155, 203, 204, 359, 394 |
| Csp6I | GTAC | 1 cut(s) | 7 |
| CviAII | CATG | 3 cut(s) | 175, 266, 430 |
| CviQI | GTAC | 1 cut(s) | 7 |
| DdeI | CTNAG | 1 cut(s) | 84 |
| EaeI | YGGCCR | 1 cut(s) | 354 |
| Eam1104I | CTCTTC | 1 cut(s) | 264 |
| EarI | CTCTTC | 1 cut(s) | 264 |
| Eco130I | CCWWGG | 1 cut(s) | 429 |
| Eco24I | GRGCYC | 1 cut(s) | 207 |
| Eco47I | GGWCC | 1 cut(s) | 155 |
| EcoO109I | RGGNCCY | 2 cut(s) | 155, 204 |
| EcoT14I | CCWWGG | 1 cut(s) | 429 |
| EcoT38I | GRGCYC | 1 cut(s) | 207 |
| ErhI | CCWWGG | 1 cut(s) | 429 |
| FaeI | CATG | 3 cut(s) | 178, 269, 433 |
| FaiI | YATR | 6 cut(s) | 33, 176, 260, 267, 279, 431 |
| FatI | CATG | 3 cut(s) | 174, 265, 429 |
| FblI | GTMKAC | 2 cut(s) | 51, 119 |
| FokI | GGATG | 2 cut(s) | 374, 393 |
| FriOI | GRGCYC | 1 cut(s) | 207 |
| FspBI | CTAG | 1 cut(s) | 290 |
| GsuI | CTGGAG | 2 cut(s) | 108, 188 |
| HaeIII | GGCC | 5 cut(s) | 205, 264, 356, 361, 395 |
| HapII | CCGG | 4 cut(s) | 324, 357, 392, 416 |
| Hin1II | CATG | 3 cut(s) | 178, 269, 433 |
| HincII | GTYRAC | 2 cut(s) | 52, 120 |
| HindII | GTYRAC | 2 cut(s) | 52, 120 |
| HinfI | GANTC | 4 cut(s) | 35, 121, 134, 434 |
| HpaII | CCGG | 4 cut(s) | 324, 357, 392, 416 |
| HphI | GGTGA | 1 cut(s) | 313 |
| Hpy166II | GTNNAC | 2 cut(s) | 52, 120 |
| Hpy188I | TCNGA | 2 cut(s) | 85, 339 |
| Hpy188III | TCNNGA | 1 cut(s) | 125 |
| Hpy8I | GTNNAC | 2 cut(s) | 52, 120 |
| Hpy99I | CGWCG | 2 cut(s) | 53, 121 |
| HpyAV | CCTTC | 4 cut(s) | 59, 238, 301, 380 |
| HpyCH4IV | ACGT | 1 cut(s) | 116 |
| HpyCH4V | TGCA | 1 cut(s) | 191 |
| HpyF3I | CTNAG | 1 cut(s) | 84 |
| HpySE526I | ACGT | 1 cut(s) | 116 |
| Hsp92II | CATG | 3 cut(s) | 178, 269, 433 |
| LmnI | GCTCC | 2 cut(s) | 166, 417 |
| MaeI | CTAG | 1 cut(s) | 290 |
| MaeII | ACGT | 1 cut(s) | 116 |
| MbiI | CCGCTC | 2 cut(s) | 376, 412 |
| MboII | GAAGA | 2 cut(s) | 281, 358 |
| MhlI | GDGCHC | 1 cut(s) | 207 |
| MluCI | AATT | 2 cut(s) | 186, 350 |
| MlyI | GAGTC | 2 cut(s) | 115, 428 |
| MmeI | TCCRAC | 3 cut(s) | 219, 408, 424 |
| MnlI | CCTC | 4 cut(s) | 265, 292, 297, 407 |
| MslI | CAYNNNNRTG | 1 cut(s) | 428 |
| MspI | CCGG | 4 cut(s) | 324, 357, 392, 416 |
| MspR9I | CCNGG | 3 cut(s) | 358, 392, 416 |
| Mva1269I | GAATGC | 1 cut(s) | 29 |
| NciI | CCSGG | 3 cut(s) | 358, 392, 416 |
| NcoI | CCATGG | 1 cut(s) | 429 |
| NheI | GCTAGC | 1 cut(s) | 289 |
| NlaIII | CATG | 3 cut(s) | 178, 269, 433 |
| NlaIV | GGNNCC | 2 cut(s) | 156, 205 |
| PctI | GAATGC | 1 cut(s) | 29 |
| PfeI | GAWTC | 2 cut(s) | 35, 134 |
| PfoI | TCCNGGA | 1 cut(s) | 414 |
| PleI | GAGTC | 2 cut(s) | 115, 428 |
| PpsI | GAGTC | 2 cut(s) | 115, 428 |
| PpuMI | RGGWCCY | 1 cut(s) | 155 |
| Psp5II | RGGWCCY | 1 cut(s) | 155 |
| PspN4I | GGNNCC | 2 cut(s) | 156, 205 |
| PspOMI | GGGCCC | 1 cut(s) | 203 |
| PspPI | GGNCC | 5 cut(s) | 155, 203, 204, 359, 394 |
| PspPPI | RGGWCCY | 1 cut(s) | 155 |
| RsaI | GTAC | 1 cut(s) | 8 |
| RsaNI | GTAC | 1 cut(s) | 7 |
| RseI | CAYNNNNRTG | 1 cut(s) | 428 |
| SalI | GTCGAC | 2 cut(s) | 50, 118 |
| Sau96I | GGNCC | 5 cut(s) | 155, 203, 204, 359, 394 |
| ScaI | AGTACT | 1 cut(s) | 8 |
| SchI | GAGTC | 2 cut(s) | 115, 428 |
| ScrFI | CCNGG | 3 cut(s) | 358, 392, 416 |
| SduI | GDGCHC | 1 cut(s) | 207 |
| SetI | ASST | 5 cut(s) | 119, 291, 303, 312, 372 |
| SinI | GGWCC | 1 cut(s) | 155 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 428 |
| SmlI | CTYRAG | 1 cut(s) | 377 |
| SmoI | CTYRAG | 1 cut(s) | 377 |
| Sse9I | AATT | 2 cut(s) | 186, 350 |
| SsiI | CCGC | 3 cut(s) | 210, 374, 410 |
| SspMI | CTAG | 1 cut(s) | 290 |
| StyD4I | CCNGG | 3 cut(s) | 356, 390, 414 |
| StyI | CCWWGG | 1 cut(s) | 429 |
| TaiI | ACGT | 1 cut(s) | 119 |
| TaqI | TCGA | 4 cut(s) | 51, 119, 137, 255 |
| TasI | AATT | 2 cut(s) | 186, 350 |
| TatI | WGTACW | 1 cut(s) | 6 |
| TfiI | GAWTC | 2 cut(s) | 35, 134 |
| TscAI | CASTG | 1 cut(s) | 171 |
| TspDTI | ATGAA | 1 cut(s) | 282 |
| TspRI | CASTG | 1 cut(s) | 171 |
| VpaK11BI | GGWCC | 1 cut(s) | 155 |
| XmiI | GTMKAC | 2 cut(s) | 51, 119 |
| XspI | CTAG | 1 cut(s) | 290 |
| ZrmI | AGTACT | 1 cut(s) | 8 |